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Conserved domains on  [gi|374255780|gb|AEZ00768|]
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ATP synthase F0 subunit 6 (mitochondrion) [Alulatettix yunnanensis]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 5.58e-89

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 261.26  E-value: 5.58e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  81 INNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRL 160
Cdd:MTH00157  81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 374255780 161 AANMIAGHLLLTLLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSSEIN 223
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 5.58e-89

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 261.26  E-value: 5.58e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  81 INNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRL 160
Cdd:MTH00157  81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 374255780 161 AANMIAGHLLLTLLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSSEIN 223
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 1.01e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 153.90  E-value: 1.01e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780    5 LFSSFDPSTSNSLSIN------WLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFII 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTllslilLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   79 IMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 374255780  159 RLAANMIAGHLLLTLLGNTGNKLSEIMLIGM-LTMQMMLLVLESAVSLIQAYVFSVLTTLYSSEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALlLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 9.45e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.38  E-value: 9.45e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  65 NKGSTLLFISLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCI 144
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 374255780 145 ETISTLIRPGTLAIRLAANMIAGHLLLTLLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSS 220
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
21-220 4.00e-28

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 105.65  E-value: 4.00e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   21 WLSTLLFIMLVPTTFWLTK----SRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFI-SLFIIIMINNVMGLF---PYIF 92
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKklvpGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLlTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   93 TSSSHMVMTLSLALPMWLSFNLFG-WINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLL 171
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 374255780  172 TLLGNTGNKLSEIML---IGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSS 220
Cdd:pfam00119 165 LLLAGLIFALLSAGFllgVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 21-218 3.79e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 89.75  E-value: 3.79e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  21 WLSTLLFIMLVpttFWLTK------SRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIMINNVMGLFPYIFTS 94
Cdd:COG0356    7 WLAMLLLLLLF---LLATRklklvpGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPP 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  95 SSHMVMTLSLALPMWLSFNLFG-WINKTNHMFEHMVPSGTPAMlMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLLTL 173
Cdd:COG0356   84 TADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPWL-APLMLPIEIISELARPLSLSLRLFGNMFAGHIILLL 162

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 374255780 174 LGNTGNKLSEIMLIGMLTMQMMLlvLESAVSLIQAYVFSVLTTLY 218
Cdd:COG0356  163 LAGLAPFLLLGVLSLLLPVAWTA--FELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 5.58e-89

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 261.26  E-value: 5.58e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  81 INNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRL 160
Cdd:MTH00157  81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 374255780 161 AANMIAGHLLLTLLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSSEIN 223
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-221 7.03e-47

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 154.42  E-value: 7.03e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSN---SLSINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFI 77
Cdd:MTH00176   1 MLVDLFSSFDPPNKNifsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  78 IIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLA 157
Cdd:MTH00176  81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 374255780 158 IRLAANMIAGHLLLT---LLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00176 161 VRLAANLSAGHLLLGllgAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 1.01e-46

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 153.90  E-value: 1.01e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780    5 LFSSFDPSTSNSLSIN------WLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFII 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTllslilLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   79 IMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 374255780  159 RLAANMIAGHLLLTLLGNTGNKLSEIMLIGM-LTMQMMLLVLESAVSLIQAYVFSVLTTLYSSEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALlLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-221 3.27e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 145.26  E-value: 3.27e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSL-----SINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISL 75
Cdd:MTH00005   1 MLTDIFSSFDPATNSLFnnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  76 FIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGT 155
Cdd:MTH00005  81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 374255780 156 LAIRLAANMIAGHLLLTLLGNTGNKL---SEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00005 161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 9.45e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.38  E-value: 9.45e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  65 NKGSTLLFISLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCI 144
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 374255780 145 ETISTLIRPGTLAIRLAANMIAGHLLLTLLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSS 220
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 5.54e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 134.22  E-value: 5.54e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSIN---WLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFI 77
Cdd:MTH00173   1 MMVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  78 IIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLA 157
Cdd:MTH00173  81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 374255780 158 IRLAANMIAGHLLLT----LLGNTGNKLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSSEI 222
Cdd:MTH00173 161 VRLLANISAGHIVLTlignYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-221 2.32e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 127.40  E-value: 2.32e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   3 TNLFSSFDPSTSNSLSINWLST---LLFIMLVPTTFWLtksrPNMLMEILTKNMNYEFNNILNNKNKGS---TLLFISLF 76
Cdd:MTH00035   5 NSIFGQFSPDTILFIPLTLLSSviaLSWLFFINPTNWL----PSRSQSIWLTFRQEILKLIFQNTNPNTapwAGLLTTVF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  77 IIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTL 156
Cdd:MTH00035  81 ILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 374255780 157 AIRLAANMIAGHLLLTLLGNTGNKLSEIMLIGMLTMQM--MLLVLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00035 161 GLRLAANLTAGHLLIFLLSTAIWELSNSPLISIITLIIffLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-221 3.23e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 126.99  E-value: 3.23e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLVPT-TFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIII 79
Cdd:MTH00179   1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  80 MINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIR 159
Cdd:MTH00179  81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 374255780 160 LAANMIAGHLLLTLLGNTGNKLSEIM-LIGMLT--MQMMLLVLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMgMVALLTllVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-221 8.41e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 123.40  E-value: 8.41e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLVPTT--FWLTkSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFII 78
Cdd:MTH00120   1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPknRLLT-NRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  79 IMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAI 158
Cdd:MTH00120  80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 374255780 159 RLAANMIAGHLLLTLLGNTGNKLSEIM-LIGMLTMQMMLL--VLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00120 160 RLTANLTAGHLLIQLISTATLNLLPTMpTLSLLTLIILLLltILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-221 1.16e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 115.06  E-value: 1.16e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLV--PTTFWLTkSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFII 78
Cdd:MTH00073   1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFptPTNKWLN-NRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  79 IMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAI 158
Cdd:MTH00073  80 LITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 374255780 159 RLAANMIAGHLLLTLLGNTGNKLSEIM-LIGMLTMQMMLL--VLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00073 160 RLTANLTAGHLLIQLISTATLVLLPLMpTVSILTMIVLFLltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-218 1.25e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 115.05  E-value: 1.25e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   1 MMTNLFSSFDPSTSNSLSINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIM 80
Cdd:MTH00101   1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  81 INNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRL 160
Cdd:MTH00101  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 374255780 161 AANMIAGHLLLTLLGNTGNKLSEIMLIGML---TMQMMLLVLESAVSLIQAYVFSVLTTLY 218
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALitfIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 70-221 1.04e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 112.66  E-value: 1.04e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  70 LLFISLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETIST 149
Cdd:MTH00132  71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 374255780 150 LIRPGTLAIRLAANMIAGHLLLTLLGNTGNKLSEIM-LIGMLTMQMMLL--VLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00132 151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMpTVAILTATLLFLltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
21-220 4.00e-28

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 105.65  E-value: 4.00e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   21 WLSTLLFIMLVPTTFWLTK----SRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFI-SLFIIIMINNVMGLF---PYIF 92
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKklvpGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLlTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780   93 TSSSHMVMTLSLALPMWLSFNLFG-WINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLL 171
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 374255780  172 TLLGNTGNKLSEIML---IGMLTMQMMLLVLESAVSLIQAYVFSVLTTLYSS 220
Cdd:pfam00119 165 LLLAGLIFALLSAGFllgVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 36-218 7.23e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 103.16  E-value: 7.23e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  36 WLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLF 115
Cdd:MTH00175  50 KLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLL 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780 116 GWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLLTLLGNTGNKL--SEIMLIGMLTMQ 193
Cdd:MTH00175 130 GFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMlsNGLIILSLFPML 209

                        170       180
                 ....*....|....*....|....*..
gi 374255780 194 MMLLV--LESAVSLIQAYVFSVLTTLY 218
Cdd:MTH00175 210 IMIFItlLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 18-218 6.15e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 95.11  E-value: 6.15e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  18 SINWLSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIMINNVMGLFPYIFTSSSH 97
Cdd:MTH00172  21 SIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTH 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  98 MVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLLTLLGNT 177
Cdd:MTH00172 101 IVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGF 180

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 374255780 178 GNK-LSEIMLIGMLTMQMMLLV--LESAVSLIQAYVFSVLTTLY 218
Cdd:MTH00172 181 GFNmLCASGFLSLFPLLIMVFItlLEIAVAVIQAYVFCLLTTIY 224
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 21-218 3.79e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 89.75  E-value: 3.79e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  21 WLSTLLFIMLVpttFWLTK------SRPNMLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIMINNVMGLFPYIFTS 94
Cdd:COG0356    7 WLAMLLLLLLF---LLATRklklvpGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPP 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  95 SSHMVMTLSLALPMWLSFNLFG-WINKTNHMFEHMVPSGTPAMlMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLLTL 173
Cdd:COG0356   84 TADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPWL-APLMLPIEIISELARPLSLSLRLFGNMFAGHIILLL 162

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 374255780 174 LGNTGNKLSEIMLIGMLTMQMMLlvLESAVSLIQAYVFSVLTTLY 218
Cdd:COG0356  163 LAGLAPFLLLGVLSLLLPVAWTA--FELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 21-218 4.05e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 84.85  E-value: 4.05e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  21 WLSTLLFIMLVPTTFWLTKSRPN---MLMEILTKNMNYEFNNILNNKNKGSTLLFISLFIIIMINNVMGLFP-YIFTSSS 96
Cdd:PRK05815  22 LLGVLILLLFALVATRKLSGVPGglqNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTA 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  97 HMVMTLSLALPMWLSFNLFG-WINKTNHMFEHMVPSgtpamLMPFMVCIETISTLIRPGTLAIRLAANMIAGHLLLTLLG 175
Cdd:PRK05815 102 DINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIISEFSRPISLSLRLFGNMLAGELILALIA 176

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 374255780 176 NTGNkLSEIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLY 218
Cdd:PRK05815 177 LLGG-AGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 61-218 6.11e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 79.60  E-value: 6.11e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  61 LNNKNKGSTLLFISLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPF 140
Cdd:MTH00174  83 LGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPL 162

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780 141 MVCIETISTLIRPGTLAIRLAANMIAGHLLLTLLGNTGNKL-SEIMLIGMLTMQMMLL---VLESAVSLIQAYVFSVLTT 216
Cdd:MTH00174 163 LTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMiNTGILIGSFVPFAILIfvtILEMAVAIIQAYVFTLLTI 242


                 ..
gi 374255780 217 LY 218
Cdd:MTH00174 243 VY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-218 1.24e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 60.14  E-value: 1.24e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  73 ISLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALpmwlsFNLFgwINKTNHMFEHMV-------PSGTPAMLMPFMVCIE 145
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV-----FTFF--ITQYAAIKAHGIkgylahlTGGTHWSLWIIMIPIE 247

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 374255780 146 TISTLIRPGTLAIRLAANMIAGHLLLTLLGNTGNKL-SEIMLIGM-LTMQMMLLVLESAVSLIQAYVFSVLTTLY 218
Cdd:PRK13419 248 FIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILkSYIVAVAVsVPFAIFIYLLELFVAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 93-218 6.84e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 49.12  E-value: 6.84e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  93 TSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAMLMPFMVCIETISTLI-RPGTLAIRLAANMIAGHLLL 171
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIVSPMaKTFALTVRLLANMTAGHVII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 374255780 172 TLLGNTGNkLSEIMLIGMLTM--QMMLLVLESAVSLIQAYVFSVLTTLY 218
Cdd:PRK13417 297 LALMGFIF-QFQSWGIVPVSVigSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 22-221 1.42e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 47.28  E-value: 1.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  22 LSTLLFIMLVPTTFWLTKSRPNMLMEILTKNMNYEFNniLNNKNKGSTLLFISLFIIIMINNVMGLFPYIFTSSSHMVMT 101
Cdd:MTH00087   7 LDVFMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFS--YSNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFT 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780 102 LSLALPMWLSFNLFGWINKTnhMFEHMVPSGTPAMLMPF-MVCIETISTLIRPGTLAIRLAANMIAGHLLLTLLGNTGNK 180
Cdd:MTH00087  85 FLYALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEK 162

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 374255780 181 LSEIMLIgmltmqmmLLVLESAVSLIQAYVFSVLTTLYSSE 221
Cdd:MTH00087 163 YVWLSIL--------AIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 57-167 2.56e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 46.03  E-value: 2.56e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  57 FNNILNNkNKGSTLLFISLFIIIMINnVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHMVPSGTPAM 136
Cdd:MTH00050  13 IYKLILG-GSVSYYYSVVLFIVLFLF-LLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLY 90

                         90       100       110
                 ....*....|....*....|....*....|.
gi 374255780 137 LMPFMVCIETISTLIRPGTLAIRLAANMIAG 167
Cdd:MTH00050  91 ICPFVCIAETISYIIRPVVLILRPFINISLG 121
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 74-218 1.61e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 41.27  E-value: 1.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 374255780  74 SLFIIIMINNVMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINK--TNHMFEHMVPSgtpAMLMPFMVcietISTLI 151
Cdd:PRK13420  80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEglREYLKHYLSPS---PFLLPFHL----ISEIT 152

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 374255780 152 RPGTLAIRLAANMIAGHLLLTLlgntgnklseIMLIGMLTMQMMLLVLESAVSLIQAYVFSVLTTLY 218
Cdd:PRK13420 153 RTLALAVRLFGNIMSLELAALL----------VLLVAGFLVPVPILMLHIIEALVQAYIFGMLALIY 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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