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Conserved domains on  [gi|364511592|gb|AEW54991|]
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CcdC like protein [Bacillus cereus F837/76]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1453 super family cl02009
CcdC protein; This family includes protein CcdC from Bacillus subtilis. The function of Ccdc ...
 13-54 3.27e-10

CcdC protein; This family includes protein CcdC from Bacillus subtilis. The function of Ccdc is not known.


The actual alignment was detected with superfamily member COG4846:

Pssm-ID: 470430  Cd Length: 157  Bit Score: 51.41  E-value: 3.27e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 364511592  13 IFTLVGLLAVRVALKSYLNQLIDLAQLSRMFFLLAFAMSMSW 54
Cdd:COG4846   96 IFILIGLLVIRIVLKLYLSGTIDPGELGGMFFLLAFGMIVPW 137
 
Name Accession Description Interval E-value
CcdC COG4846
Cytochrome c biogenesis protein CcdC [Energy production and conversion, Posttranslational ...
 13-54 3.27e-10

Cytochrome c biogenesis protein CcdC [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443874  Cd Length: 157  Bit Score: 51.41  E-value: 3.27e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 364511592  13 IFTLVGLLAVRVALKSYLNQLIDLAQLSRMFFLLAFAMSMSW 54
Cdd:COG4846   96 IFILIGLLVIRIVLKLYLSGTIDPGELGGMFFLLAFGMIVPW 137
DUF1453 pfam07301
CcdC protein; This family includes protein CcdC from Bacillus subtilis. The function of Ccdc ...
 13-54 1.97e-08

CcdC protein; This family includes protein CcdC from Bacillus subtilis. The function of Ccdc is not known.


Pssm-ID: 429394  Cd Length: 144  Bit Score: 46.42  E-value: 1.97e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 364511592   13 IFTLVGLLAVRVALKSYLNQLIDLAQLSRMFFLLAFAMSMSW 54
Cdd:pfam07301  93 IFILIGLLVIRLVLKSYLSSSIDPGQLSGLFFLLAFGMIVPW 134
 
Name Accession Description Interval E-value
CcdC COG4846
Cytochrome c biogenesis protein CcdC [Energy production and conversion, Posttranslational ...
 13-54 3.27e-10

Cytochrome c biogenesis protein CcdC [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443874  Cd Length: 157  Bit Score: 51.41  E-value: 3.27e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 364511592  13 IFTLVGLLAVRVALKSYLNQLIDLAQLSRMFFLLAFAMSMSW 54
Cdd:COG4846   96 IFILIGLLVIRIVLKLYLSGTIDPGELGGMFFLLAFGMIVPW 137
DUF1453 pfam07301
CcdC protein; This family includes protein CcdC from Bacillus subtilis. The function of Ccdc ...
 13-54 1.97e-08

CcdC protein; This family includes protein CcdC from Bacillus subtilis. The function of Ccdc is not known.


Pssm-ID: 429394  Cd Length: 144  Bit Score: 46.42  E-value: 1.97e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 364511592   13 IFTLVGLLAVRVALKSYLNQLIDLAQLSRMFFLLAFAMSMSW 54
Cdd:pfam07301  93 IFILIGLLVIRLVLKSYLSSSIDPGQLSGLFFLLAFGMIVPW 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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