|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02248 |
PLN02248 |
cellulose synthase-like protein |
1-1124 |
0e+00 |
|
cellulose synthase-like protein
Pssm-ID: 215138 [Multi-domain] Cd Length: 1135 Bit Score: 2376.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1 MSSINRQSSKKSGRNSGGSTSQGSQSSGG-PSVKFARRTSSGRYVSLSRDEIDVSSDLSG-DYMNYTVHIPPTPDNQPMd 78
Cdd:PLN02248 1 MASSSSKPSRKSLSSSSSSAGPPSNNSSSpQSVKFARRTSSGRYVSLSRDDLDLSGELSSsDYLNYTVHIPPTPDNQPM- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 79 ssvAMKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEVTHPQMAGSKGSLCSI--CDGRVMRDERGRDVTPCECRYKICR 156
Cdd:PLN02248 80 ---AGKAEEQYVSNSIFTGGFNSVTRAHLMDKVIESEVSHPQMAGAKGSSCAMpgCDGKVMRDERGEDLLPCECGFKICR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 157 DCFIDAQKESGMCPGCKEPYKVGEYEEDLTDqySNNGALPLPAPNGSKRNpNNMSVMK------RNQNGEFDHNKWLFET 230
Cdd:PLN02248 157 DCYIDAVKSGGICPGCKEPYKVTDLDDEVPD--ESSGALPLPPPGGSKMD-RRLSLMKsnsllmRSQTGDFDHNRWLFET 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 231 QGTYGVGNAYWPQDDMYGDDALKAGMLD-PEKPWKPLSRVTPIPSGIISPYRLLILVRFVVLIFFLHWRVVNPNKDAVWL 309
Cdd:PLN02248 234 KGTYGYGNAVWPKDDGYGDDGGGGGPGEfMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 310 WIMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLHEKFDSPSPSNPTGRSDLPGMDLFVSTADPEKEPPLTTANTILSI 389
Cdd:PLN02248 314 WGMSVVCEIWFAFSWLLDQLPKLCPINRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSI 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 390 LAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPESYFSLKVDPTKNKSRTDFVKDRRRVKRE 469
Cdd:PLN02248 394 LAADYPVEKLACYLSDDGGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKRE 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 470 YDEFKVRINGLPDSIRRRSDAFNAREEMKMMKHMKES-GADPSEPVKVLKSTWMADGTHWPGTWATPSSEHAKGDHAGIL 548
Cdd:PLN02248 474 YDEFKVRINGLPDSIRRRSDAYNAREEIKAKKKQRESgGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGII 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 549 QVMLKPPSPDPLFGSADDDKILDFTEVDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIY 628
Cdd:PLN02248 554 QVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIY 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 629 NCKAVREGMCFMMDRGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPP- 707
Cdd:PLN02248 634 NSLAIREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPr 713
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 708 -------FADKDSDNKDGKKIEGSETPAMNASEFDPNLDVNLLPKRFGNSTMLAESIPVAEFQGRPLADHPAIKFGRPLG 780
Cdd:PLN02248 714 akehsgcFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPG 793
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 781 VLRAPREPLDATTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDR 860
Cdd:PLN02248 794 ALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDR 873
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 861 LHQVLRWATGSVEIFFSKNNAFLASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLI 940
Cdd:PLN02248 874 LHQVLRWATGSVEIFFSRNNALLASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLI 953
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 941 ITVCLVMLAILEVKWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGEDEDDMFADLYIVKW 1020
Cdd:PLN02248 954 ITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYIVKW 1033
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1021 SSLMVPPIVIAMTNIIAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLS 1100
Cdd:PLN02248 1034 TSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSITIS 1113
|
1130 1140
....*....|....*....|....
gi 356501469 1101 LLWVSISPPQGAdgQGVGGDFQFP 1124
Cdd:PLN02248 1114 LLWVAISPPSGA--AQIGGGFQFP 1135
|
|
| Cellulose_synt |
pfam03552 |
Cellulose synthase; Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose ... |
365-1113 |
0e+00 |
|
Cellulose synthase; Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits', plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity.
Pssm-ID: 460970 [Multi-domain] Cd Length: 715 Bit Score: 1282.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 365 MDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPESYF 444
Cdd:pfam03552 1 VDVFVSTVDPLKEPPLVTANTVLSILAVDYPVEKVSCYVSDDGAAMLTFEALAETAEFARKWVPFCKKHNIEPRAPESYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 445 SLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLPDSIRrrsdafnareemkmmkhmkesgadpsepvKVLKSTW-MA 523
Cdd:pfam03552 81 SLKIDYLKDKVRPDFVKERRAMKREYEEFKVRINALVAKAQ-----------------------------KVPKEGWtMQ 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 524 DGTHWPGtwatpsseHAKGDHAGILQVMLKPPSPDPLFGsadddkildftevdTRLPMFVYVSREKRPGYDHNKKAGAMN 603
Cdd:pfam03552 132 DGTPWPG--------NNTGDHPGMIQVFLGPPGGEDVEG--------------NELPRLVYVSREKRPGYDHHKKAGAMN 189
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 604 ALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRG-GEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALD 682
Cdd:pfam03552 190 ALVRVSAVLSNGPFILNLDCDHYINNSKAIREGMCFMMDPGlGKKVCYVQFPQRFDGIDPSDRYANRNTVFFDINMRGLD 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 683 GLQGPMYVGTGCMFRRFALYGFDPPFADKDS---------------------DNKDGKKIEGSETPAMNASEFDPNLDVN 741
Cdd:pfam03552 270 GIQGPVYVGTGCVFRRQALYGFDPPKKKKHPgmtsnccccfgrrkkkksakkAKKKGSKKKESEAPIFNLEDIDEGAGDE 349
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 742 ----------LLPKRFGNSTMLAESIPVAEFqgrpladhpaikfgrplgvlRAPREPLDATTVAEAVSVISCWYEDKTEW 811
Cdd:pfam03552 350 deksslmsqlSLEKKFGQSTVFVASTLMAEG--------------------GVPRSPLPAALVKEAIHVISCGYEDKTEW 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 812 GDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFLASKRLKIL 891
Cdd:pfam03552 410 GKEIGWIYGSVTEDILTGFRMHCRGWRSIYCMPKRDAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPIWYGGRLKFL 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 892 QRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILEVKWSGVELEQWWRNEQFWL 971
Cdd:pfam03552 490 QRFAYINVGIYPFTSIPLLAYCFLPAICLFTGKFIVPTLSNFASIYFLSLFLSIIATGILELRWSGVSIEEWWRNEQFWV 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 972 ISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGeDEDDMFADLYIVKWSSLMVPPIVIAMTNIIAIAVAFSRTIYSANP 1051
Cdd:pfam03552 570 IGGTSAHLFAVFQGLLKVIAGIDTSFTVTSKASD-DEDDEFADLYIFKWTTLLIPPTTILIVNLVGIVAGVSRAINSGYP 648
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 356501469 1052 QWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISPPQGAD 1113
Cdd:pfam03552 649 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSGLLASIFSLLWVRINPFVSKT 710
|
|
| CESA_CelA_like |
cd06421 |
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of ... |
584-875 |
5.65e-15 |
|
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Pssm-ID: 133043 [Multi-domain] Cd Length: 234 Bit Score: 75.69 E-value: 5.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 584 YVSREKRPGYdhnkKAGAMN-ALVRasailSNGPFILNLDCDH-----YIynckavREGMCFMMDRggEDICYIQFPQRF 657
Cdd:cd06421 62 YLTRPDNRHA----KAGNLNnALAH-----TTGDFVAILDADHvptpdFL------RRTLGYFLDD--PKVALVQTPQFF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 658 EGIDP----SDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALygfdppfadkdsdnkdgkkiegsetpamnase 733
Cdd:cd06421 125 YNPDPfdwlADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREAL-------------------------------- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 734 fdpnldvnllpkrfgnstmlaesipvaefqgrpladhpaikfgrplgvlraprepldattvaeavsviscwyedktewgD 813
Cdd:cd06421 173 -------------------------------------------------------------------------------D 173
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 356501469 814 RVGWIY-GSVTEDVVTGYRMHNRGWRSVYcITKRDAFrGSAPINLTDRLHQVLRWATGSVEIF 875
Cdd:cd06421 174 EIGGFPtDSVTEDLATSLRLHAKGWRSVY-VPEPLAA-GLAPETLAAYIKQRLRWARGMLQIL 234
|
|
| BcsA |
COG1215 |
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ... |
816-957 |
4.28e-12 |
|
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];
Pssm-ID: 440828 [Multi-domain] Cd Length: 303 Bit Score: 68.23 E-value: 4.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 816 GWIYGSVTEDVVTGYRMHNRGWRSVYCitkRDAF-RGSAPINLTDRLHQVLRWATGSVEIFFsKNNAFLASKRLKILQRL 894
Cdd:COG1215 160 GFDEDTLGEDLDLSLRLLRAGYRIVYV---PDAVvYEEAPETLRALFRQRRRWARGGLQLLL-KHRPLLRPRRLLLFLLL 235
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 356501469 895 SYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAIL--EVKWSG 957
Cdd:COG1215 236 LLLPLLLLLLLLALLALLLLLLPALLLALLLALRRRRLLLPLLHLLYGLLLLLAALRgkKVVWKK 300
|
|
| SLATT_5 |
NF033631 |
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally ... |
874-952 |
2.03e-03 |
|
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family contains an additional C-terminal alpha-helix, and strictly associates with a reverse transcriptase domain, part of a predicted retroelement with diversity-generating potential.
Pssm-ID: 468117 Cd Length: 182 Bit Score: 40.36 E-value: 2.03e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 356501469 874 IFFSKNNAFLASKRLKILQRLSYLNVGIYpftSLFLVvycflpALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILE 952
Cdd:NF033631 5 IWITRKARFNASRRLLRKNFLSTFSLSFY---SIYLI------ALSLLQLIFPNNFSNNLLSIISIILSVLVLVISLLI 74
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02248 |
PLN02248 |
cellulose synthase-like protein |
1-1124 |
0e+00 |
|
cellulose synthase-like protein
Pssm-ID: 215138 [Multi-domain] Cd Length: 1135 Bit Score: 2376.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1 MSSINRQSSKKSGRNSGGSTSQGSQSSGG-PSVKFARRTSSGRYVSLSRDEIDVSSDLSG-DYMNYTVHIPPTPDNQPMd 78
Cdd:PLN02248 1 MASSSSKPSRKSLSSSSSSAGPPSNNSSSpQSVKFARRTSSGRYVSLSRDDLDLSGELSSsDYLNYTVHIPPTPDNQPM- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 79 ssvAMKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEVTHPQMAGSKGSLCSI--CDGRVMRDERGRDVTPCECRYKICR 156
Cdd:PLN02248 80 ---AGKAEEQYVSNSIFTGGFNSVTRAHLMDKVIESEVSHPQMAGAKGSSCAMpgCDGKVMRDERGEDLLPCECGFKICR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 157 DCFIDAQKESGMCPGCKEPYKVGEYEEDLTDqySNNGALPLPAPNGSKRNpNNMSVMK------RNQNGEFDHNKWLFET 230
Cdd:PLN02248 157 DCYIDAVKSGGICPGCKEPYKVTDLDDEVPD--ESSGALPLPPPGGSKMD-RRLSLMKsnsllmRSQTGDFDHNRWLFET 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 231 QGTYGVGNAYWPQDDMYGDDALKAGMLD-PEKPWKPLSRVTPIPSGIISPYRLLILVRFVVLIFFLHWRVVNPNKDAVWL 309
Cdd:PLN02248 234 KGTYGYGNAVWPKDDGYGDDGGGGGPGEfMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 310 WIMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLHEKFDSPSPSNPTGRSDLPGMDLFVSTADPEKEPPLTTANTILSI 389
Cdd:PLN02248 314 WGMSVVCEIWFAFSWLLDQLPKLCPINRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSI 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 390 LAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPESYFSLKVDPTKNKSRTDFVKDRRRVKRE 469
Cdd:PLN02248 394 LAADYPVEKLACYLSDDGGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKRE 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 470 YDEFKVRINGLPDSIRRRSDAFNAREEMKMMKHMKES-GADPSEPVKVLKSTWMADGTHWPGTWATPSSEHAKGDHAGIL 548
Cdd:PLN02248 474 YDEFKVRINGLPDSIRRRSDAYNAREEIKAKKKQRESgGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGII 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 549 QVMLKPPSPDPLFGSADDDKILDFTEVDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIY 628
Cdd:PLN02248 554 QVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIY 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 629 NCKAVREGMCFMMDRGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPP- 707
Cdd:PLN02248 634 NSLAIREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPr 713
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 708 -------FADKDSDNKDGKKIEGSETPAMNASEFDPNLDVNLLPKRFGNSTMLAESIPVAEFQGRPLADHPAIKFGRPLG 780
Cdd:PLN02248 714 akehsgcFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPG 793
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 781 VLRAPREPLDATTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDR 860
Cdd:PLN02248 794 ALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDR 873
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 861 LHQVLRWATGSVEIFFSKNNAFLASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLI 940
Cdd:PLN02248 874 LHQVLRWATGSVEIFFSRNNALLASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLI 953
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 941 ITVCLVMLAILEVKWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGEDEDDMFADLYIVKW 1020
Cdd:PLN02248 954 ITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYIVKW 1033
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1021 SSLMVPPIVIAMTNIIAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLS 1100
Cdd:PLN02248 1034 TSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSITIS 1113
|
1130 1140
....*....|....*....|....
gi 356501469 1101 LLWVSISPPQGAdgQGVGGDFQFP 1124
Cdd:PLN02248 1114 LLWVAISPPSGA--AQIGGGFQFP 1135
|
|
| Cellulose_synt |
pfam03552 |
Cellulose synthase; Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose ... |
365-1113 |
0e+00 |
|
Cellulose synthase; Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits', plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity.
Pssm-ID: 460970 [Multi-domain] Cd Length: 715 Bit Score: 1282.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 365 MDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPESYF 444
Cdd:pfam03552 1 VDVFVSTVDPLKEPPLVTANTVLSILAVDYPVEKVSCYVSDDGAAMLTFEALAETAEFARKWVPFCKKHNIEPRAPESYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 445 SLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLPDSIRrrsdafnareemkmmkhmkesgadpsepvKVLKSTW-MA 523
Cdd:pfam03552 81 SLKIDYLKDKVRPDFVKERRAMKREYEEFKVRINALVAKAQ-----------------------------KVPKEGWtMQ 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 524 DGTHWPGtwatpsseHAKGDHAGILQVMLKPPSPDPLFGsadddkildftevdTRLPMFVYVSREKRPGYDHNKKAGAMN 603
Cdd:pfam03552 132 DGTPWPG--------NNTGDHPGMIQVFLGPPGGEDVEG--------------NELPRLVYVSREKRPGYDHHKKAGAMN 189
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 604 ALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRG-GEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALD 682
Cdd:pfam03552 190 ALVRVSAVLSNGPFILNLDCDHYINNSKAIREGMCFMMDPGlGKKVCYVQFPQRFDGIDPSDRYANRNTVFFDINMRGLD 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 683 GLQGPMYVGTGCMFRRFALYGFDPPFADKDS---------------------DNKDGKKIEGSETPAMNASEFDPNLDVN 741
Cdd:pfam03552 270 GIQGPVYVGTGCVFRRQALYGFDPPKKKKHPgmtsnccccfgrrkkkksakkAKKKGSKKKESEAPIFNLEDIDEGAGDE 349
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 742 ----------LLPKRFGNSTMLAESIPVAEFqgrpladhpaikfgrplgvlRAPREPLDATTVAEAVSVISCWYEDKTEW 811
Cdd:pfam03552 350 deksslmsqlSLEKKFGQSTVFVASTLMAEG--------------------GVPRSPLPAALVKEAIHVISCGYEDKTEW 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 812 GDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFLASKRLKIL 891
Cdd:pfam03552 410 GKEIGWIYGSVTEDILTGFRMHCRGWRSIYCMPKRDAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPIWYGGRLKFL 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 892 QRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILEVKWSGVELEQWWRNEQFWL 971
Cdd:pfam03552 490 QRFAYINVGIYPFTSIPLLAYCFLPAICLFTGKFIVPTLSNFASIYFLSLFLSIIATGILELRWSGVSIEEWWRNEQFWV 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 972 ISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGeDEDDMFADLYIVKWSSLMVPPIVIAMTNIIAIAVAFSRTIYSANP 1051
Cdd:pfam03552 570 IGGTSAHLFAVFQGLLKVIAGIDTSFTVTSKASD-DEDDEFADLYIFKWTTLLIPPTTILIVNLVGIVAGVSRAINSGYP 648
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 356501469 1052 QWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISPPQGAD 1113
Cdd:pfam03552 649 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSGLLASIFSLLWVRINPFVSKT 710
|
|
| PLN02189 |
PLN02189 |
cellulose synthase |
111-1108 |
0e+00 |
|
cellulose synthase
Pssm-ID: 215121 [Multi-domain] Cd Length: 1040 Bit Score: 971.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 111 VIDSEVTHPQMAGSKGSLCSICDGRVMRDERGRDVTPC-ECRYKICRDCFIDAQKE-SGMCPGCKEPYKV---------G 179
Cdd:PLN02189 19 VIHGHEEPKPLRNLDGQVCEICGDEIGLTVDGDLFVACnECGFPVCRPCYEYERREgTQNCPQCKTRYKRlkgsprvegD 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 180 EYEEDLTD----------QYSN----------------------NGALPlPAPNGSKRNP--NNMSVMKRNQNGEFDHNK 225
Cdd:PLN02189 99 DDEEDIDDiehefniddeQDKNkhiteamlhgkmsygrgpdddeNNQFP-PVITGVRSRPvsGEFPIGSGYGHGEQMLSS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 226 WLFETQGTYGV---GNAYWPQDDMYG-----DD-ALKAGML-------DPEKPW-----KPLSRVTPIPSGIISPYRLLI 284
Cdd:PLN02189 178 SLHKRVHPYPVsepGSAKWDEKKEGGwkermDDwKMQQGNLgpdpddyDADMALidearQPLSRKVPIASSKVNPYRMVI 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 285 LVRFVVLIFFLHWRVVNPNKDAVWLWIMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLHEKFDSPSPSNPtgrsdLPG 364
Cdd:PLN02189 258 VARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNM-----LSP 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 365 MDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPESYF 444
Cdd:PLN02189 333 VDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPEFYF 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 445 SLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLPdsirrrsdafnareemkmmkhmkesgadpSEPVKVLKSTW-MA 523
Cdd:PLN02189 413 SLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIV-----------------------------AKAQKVPPEGWiMQ 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 524 DGTHWPGtwatpsseHAKGDHAGILQVMLKPPspdplfGSADDDkildftevDTRLPMFVYVSREKRPGYDHNKKAGAMN 603
Cdd:PLN02189 464 DGTPWPG--------NNTRDHPGMIQVFLGHS------GGHDTE--------GNELPRLVYVSREKRPGFQHHKKAGAMN 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 604 ALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMD-RGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALD 682
Cdd:PLN02189 522 ALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDpQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLD 601
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 683 GLQGPMYVGTGCMFRRFALYGFDPP----------------FADKDSDN-KDGKKIEGSETPAMNASEFDPNLDVNLlPK 745
Cdd:PLN02189 602 GIQGPVYVGTGCVFRRQALYGYDPPkgpkrpkmvtcdccpcFGRRKKKHaKNGLNGEVAALGGMESDKEMLMSQMNF-EK 680
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 746 RFGNSTMLAESIpVAEFQGRPLADHPAIkfgrplgvlraprepldatTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTED 825
Cdd:PLN02189 681 KFGQSAIFVTST-LMEEGGVPPSSSPAA-------------------LLKEAIHVISCGYEDKTDWGLELGWIYGSITED 740
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 826 VVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFL---ASKRLKILQRLSYLNVGIY 902
Cdd:PLN02189 741 ILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLygyKGGNLKWLERFAYVNTTIY 820
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 903 PFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILEVKWSGVELEQWWRNEQFWLISGTSAHLAAV 982
Cdd:PLN02189 821 PFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAV 900
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 983 VQGLLKVMAGIEISFTLTSKSAgedEDDMFADLYIVKWSSLMVPPIVIAMTNIIAIAVAFSRTIYSANPQWSKFIGGAFF 1062
Cdd:PLN02189 901 VQGLLKVLAGIDTNFTVTSKAT---DDDEFGELYAFKWTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFF 977
|
1050 1060 1070 1080
....*....|....*....|....*....|....*....|....*.
gi 356501469 1063 SFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISP 1108
Cdd:PLN02189 978 AFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 1023
|
|
| PLN02915 |
PLN02915 |
cellulose synthase A [UDP-forming], catalytic subunit |
112-1108 |
0e+00 |
|
cellulose synthase A [UDP-forming], catalytic subunit
Pssm-ID: 215494 [Multi-domain] Cd Length: 1044 Bit Score: 961.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 112 IDSEVTHPQMAGSKGSLCSICDGRVMRDERGRDVTPC-ECRYKICRDCFIDAQKESGM-CPGCKEPYK--------VGEY 181
Cdd:PLN02915 1 MDDEDRPPTRQSADAKTCRVCGDEVGVKEDGQPFVAChVCGFPVCKPCYEYERSEGNQcCPQCNTRYKrhkgcprvEGDD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 182 EEDLT-DQYSNNGALPLPAPNgskrNPNNMSVMKRNQNGEFDHNKW-----LFETQGTYgVGNAYWPQDDMYGDDALKag 255
Cdd:PLN02915 81 EEGNDmDDFEDEFQIKSPQDH----EPVHQNVFAGSENGDYNAQQWrpggpAFSSTGSV-AGKDLEAEREGYGNAEWK-- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 256 mlDPEKPWK---------------------------------PLSRVTPIPSGIISPYRLLILVRFVVLIFFLHWRVVNP 302
Cdd:PLN02915 154 --DRVDKWKtrqekrglvnkddsddgddkgdeeeyllaearqPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 303 NKDAVWLWIMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLHEKFDSPSPSNptgrsDLPGMDLFVSTADPEKEPPLTT 382
Cdd:PLN02915 232 AYDAYPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEPN-----RLAPVDVFVSTVDPLKEPPIIT 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 383 ANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCRKHNIEPRNPESYFSLKVDPTKNKSRTDFVKD 462
Cdd:PLN02915 307 ANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKE 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 463 RRRVKREYDEFKVRINGLPDSIRRRsdafnareemkmmkhmkesgadPSEpvkvlksTW-MADGTHWPGtwatpsseHAK 541
Cdd:PLN02915 387 RRAMKREYEEFKVRINALVAKAQKK----------------------PEE-------GWvMQDGTPWPG--------NNT 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 542 GDHAGILQVMLKPPspdplfGSADDDkildftevDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNL 621
Cdd:PLN02915 430 RDHPGMIQVYLGSE------GALDVE--------GKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNL 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 622 DCDHYIYNCKAVREGMCFMMD-RGGEDICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFA 700
Cdd:PLN02915 496 DCDHYINNSKAVREAMCFLMDpQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQA 575
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 701 LYGFDPPFADK------------------------DSDNKDGKKIEGS---------------------------ETPAM 729
Cdd:PLN02915 576 LYGYDPPVSEKrpkmtcdcwpswcccccgggrrgkSKKSKKGKKGRRSllgglkkrkkkgggggsmmgkkygrkkSQAVF 655
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 730 NASEFDPNLD-------VNLLP-----KRFGNSTMLAESIpVAEFQGRPLADHPaikfgrplgvlraprepldATTVAEA 797
Cdd:PLN02915 656 DLEEIEEGLEgydelekSSLMSqknfeKRFGQSPVFIAST-LMEDGGLPEGTNP-------------------AALIKEA 715
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 798 VSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFS 877
Cdd:PLN02915 716 IHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMS 795
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 878 KNNA--FLASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILEVKW 955
Cdd:PLN02915 796 RHCPlwYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRW 875
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 956 SGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGeDEDDMFADLYIVKWSSLMVPPIVIAMTNI 1035
Cdd:PLN02915 876 SGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAD-DEADEFGELYLFKWTTLLIPPTTLIILNM 954
|
1050 1060 1070 1080 1090 1100 1110
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 356501469 1036 IAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISP 1108
Cdd:PLN02915 955 VGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDP 1027
|
|
| PLN02195 |
PLN02195 |
cellulose synthase A |
121-1108 |
0e+00 |
|
cellulose synthase A
Pssm-ID: 215124 [Multi-domain] Cd Length: 977 Bit Score: 957.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 121 MAGSKGSLCSICDGRVMRDERGRDVTPC-ECRYKICRDCF-IDAQKESGMCPGCKEPYKVGEYEEDLTDQYSNNGALPLP 198
Cdd:PLN02195 1 MMESGAPICATCGEEVGVDSNGEAFVAChECSYPLCKACLeYEIKEGRKVCLRCGGPYDAENVFDDVETKHSRNQSTMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 199 APNGSK------RNPNNMSVMKRNQNGEFDHNKWLFETQGTYGVGN---AYWPQDDMYGDDALKAGMLDpEKP----WKP 265
Cdd:PLN02195 81 HLNDTQdvgihaRHISSVSTVDSELNDEYGNPIWKNRVESWKDKKNkkkKSAKKKEAHKAQIPPEQQME-EKPsadaYEP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 266 LSRVTPIPSGIISPYRLLILVRFVVLIFFLHWRVVNPNKDAVWLWIMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLH 345
Cdd:PLN02195 160 LSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRETYIDRLS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 346 EKFDSPSPSnptgrSDLPGMDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADL 425
Cdd:PLN02195 240 ARYEREGEP-----SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARK 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 426 WVPFCRKHNIEPRNPESYFSLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLpdsirrrsdafnareemkmmkhMKE 505
Cdd:PLN02195 315 WVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNAL----------------------VAK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 506 SGADPSEpvkvlksTW-MADGTHWPGtwatpsseHAKGDHAGILQVMLKPPspdplfGSADDDkildftevDTRLPMFVY 584
Cdd:PLN02195 373 AQKTPEE-------GWtMQDGTPWPG--------NNTRDHPGMIQVFLGET------GARDIE--------GNELPRLVY 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 585 VSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRG-GEDICYIQFPQRFEGIDPS 663
Cdd:PLN02195 424 VSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVvGRDVCYVQFPQRFDGIDRS 503
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 664 DRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPPF-----------------------ADKDSDNKDGKK 720
Cdd:PLN02195 504 DRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSlprlpkssssssscccptkkkpeQDPSEIYRDAKR 583
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 721 iEGSETPAMNASEFDpNLDV---NLL------PKRFGNSTMLAESIpVAEFQGRPLADHPAikfgrplgvlrapreplda 791
Cdd:PLN02195 584 -EDLNAAIFNLREID-NYDEyerSMLisqmsfEKTFGLSSVFIEST-LMENGGVPESANPS------------------- 641
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 792 TTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGS 871
Cdd:PLN02195 642 TLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGS 721
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 872 VEIFFSKNNAF---LASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVML 948
Cdd:PLN02195 722 VEIFLSRHCPLwygYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILT 801
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 949 AILEVKWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAgedEDDMFADLYIVKWSSLMVPPI 1028
Cdd:PLN02195 802 SVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAA---DDTEFGELYMVKWTTLLIPPT 878
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1029 VIAMTNIIAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISP 1108
Cdd:PLN02195 879 SLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINP 958
|
|
| PLN02638 |
PLN02638 |
cellulose synthase A (UDP-forming), catalytic subunit |
121-1108 |
0e+00 |
|
cellulose synthase A (UDP-forming), catalytic subunit
Pssm-ID: 215343 [Multi-domain] Cd Length: 1079 Bit Score: 954.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 121 MAGSKGSLCSICDGRVMRDERGRDVTPCE-CRYKICRDCFIDAQKESGM-CPGCKEPYK--------VGEYEED------ 184
Cdd:PLN02638 12 MKHGGGQVCQICGDNVGKTVDGEPFVACDvCAFPVCRPCYEYERKDGNQsCPQCKTKYKrhkgspaiLGDEEEDgdaddg 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 185 --------------------------------------------------LTDQYSNNGALPLPAP---------NGSKR 205
Cdd:PLN02638 92 asdfnypssnqdqkqkiaermlswrmnsgrgedvgapnydkevshnhiplLTNGQSVSGELSAASPerlsmaspgAGGKR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 206 NPNNMSVMKRNQNGEFDHNKWLfetqGTYGVGNAYWPQ----------------------------------DDMYGDDA 251
Cdd:PLN02638 172 IPYASDVNQSPNIRVVDPVREF----GSPGLGNVAWKErvdgwkmkqdkntipmstgtapsegrgggdidasTDVLMDDA 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 252 LkagmLDPEKPwKPLSRVTPIPSGIISPYRLLILVRFVVLIFFLHWRVVNPNKDAVWLWIMSITCEIWFGFSWILDQVPK 331
Cdd:PLN02638 248 L----LNDEAR-QPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFALSWILDQFPK 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 332 LCPVNRSTDLAVLHEKFDSPSPSnptgrSDLPGMDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALL 411
Cdd:PLN02638 323 WLPVNRETYLDRLALRYDREGEP-----SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAML 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 412 TFEAMAEAASFADLWVPFCRKHNIEPRNPESYFSLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLPdsirrrsdaf 491
Cdd:PLN02638 398 TFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLV---------- 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 492 nareemkmmkhmkesgadpSEPVKVLKSTW-MADGTHWPGtwatpsseHAKGDHAGILQVMLKPPspdplfGSADDDkil 570
Cdd:PLN02638 468 -------------------AKAQKVPEEGWiMQDGTPWPG--------NNTRDHPGMIQVFLGHS------GGLDTE--- 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 571 dftevDTRLPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRG-GEDIC 649
Cdd:PLN02638 512 -----GNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNlGKSVC 586
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 650 YIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPPF--------------------- 708
Cdd:PLN02638 587 YVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIkpkhkkpgflsslcggsrkks 666
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 709 ---ADKDSDNKDGKKIEGSETPAMN---------ASEFDPNLDVNL----LPKRFGNSTMLAESIpVAEFQGRPLADHPA 772
Cdd:PLN02638 667 sksSKKGSDKKKSGKHVDPTVPVFNledieegveGAGFDDEKSLLMsqmsLEKRFGQSAVFVAST-LMENGGVPQSATPE 745
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 773 ikfgrplgvlraprepldaTTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGS 852
Cdd:PLN02638 746 -------------------SLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGS 806
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 853 APINLTDRLHQVLRWATGSVEIFFSKNNA--FLASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETL 930
Cdd:PLN02638 807 APINLSDRLNQVLRWALGSVEILFSRHCPiwYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQI 886
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 931 SIAFLIYLLIITVCLVMLAILEVKWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGEDEDd 1010
Cdd:PLN02638 887 SNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD- 965
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1011 mFADLYIVKWSSLMVPPIVIAMTNIIAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFV 1090
Cdd:PLN02638 966 -FAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVV 1044
|
1130
....*....|....*...
gi 356501469 1091 WSGLIAITLSLLWVSISP 1108
Cdd:PLN02638 1045 WSILLASIFSLLWVRIDP 1062
|
|
| PLN02400 |
PLN02400 |
cellulose synthase |
126-1108 |
0e+00 |
|
cellulose synthase
Pssm-ID: 215224 [Multi-domain] Cd Length: 1085 Bit Score: 953.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 126 GSLCSICDGRVMRDERGRDVTPC-ECRYKICRDCFIDAQKE-SGMCPGCKEPYK---------VGEYEEDLTD------- 187
Cdd:PLN02400 36 GQICQICGDDVGVTETGDVFVACnECAFPVCRPCYEYERKDgTQCCPQCKTRYRrhkgsprveGDEDEDDVDDlenefny 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 188 -QYSNNGALP----------------LPAP---NGSK-------RNPNNMSVM---------KRNQNGE----------- 220
Cdd:PLN02400 116 aQGNGKARHQwqgedielssssrhesQPIPlltHGQPvsgeipcATPDNQSVRttsgplgpaERNANSSpyidprqpvpv 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 221 --FDHNKWLfetqGTYGVGNAYW---------PQD----------------DM--YGDDALKAGMLDPEKpwKPLSRVTP 271
Cdd:PLN02400 196 riVDPSKDL----NSYGLGNVDWkervegwklKQDknmmqmtnkyhegkggDMegTGSNGDELQMADDAR--LPMSRVVP 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 272 IPSGIISPYRLLILVRFVVLIFFLHWRVVNPNKDAVWLWIMSITCEIWFGFSWILDQVPKLCPVNRSTDLAVLHEKFDSP 351
Cdd:PLN02400 270 IPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDRD 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 352 SPSnptgrSDLPGMDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADLWVPFCR 431
Cdd:PLN02400 350 GEP-----SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCK 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 432 KHNIEPRNPESYFSLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLpdsirrrsdafnareeMKMMKHMKESGadps 511
Cdd:PLN02400 425 KHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINAL----------------VAKAQKIPEEG---- 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 512 epvkvlkstW-MADGTHWPGTwaTPSsehakgDHAGILQVMLKPPspdplfGSADDDkildftevDTRLPMFVYVSREKR 590
Cdd:PLN02400 485 ---------WtMQDGTPWPGN--NPR------DHPGMIQVFLGHS------GGLDTD--------GNELPRLVYVSREKR 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 591 PGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRG-GEDICYIQFPQRFEGIDPSDRYANH 669
Cdd:PLN02400 534 PGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAiGKKTCYVQFPQRFDGIDLHDRYANR 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 670 NTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPPFADKD------------------------SDNKDGKKIEGSE 725
Cdd:PLN02400 614 NIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDlepniivksccgsrkkgkgskkynIDKKRAMKRTESN 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 726 TPAMNASEFDPNLD-----------VNLLPKRFGNSTMLAESIpVAEFQGRPLADHPaikfgrplgvlraprepldATTV 794
Cdd:PLN02400 694 VPIFNMEDIEEGVEgyddersllmsQKSLEKRFGQSPVFIAAT-FMEQGGIPPSTNP-------------------ATLL 753
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 795 AEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEI 874
Cdd:PLN02400 754 KEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEI 833
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 875 FFSKNNA--FLASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILE 952
Cdd:PLN02400 834 LLSRHCPiwYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILE 913
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 953 VKWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAGEDEDdmFADLYIVKWSSLMVPPIVIAM 1032
Cdd:PLN02400 914 LRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD--FAELYVFKWTSLLIPPTTVLL 991
|
1050 1060 1070 1080 1090 1100 1110
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 356501469 1033 TNIIAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISP 1108
Cdd:PLN02400 992 VNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1067
|
|
| PLN02436 |
PLN02436 |
cellulose synthase A |
126-1114 |
0e+00 |
|
cellulose synthase A
Pssm-ID: 215239 [Multi-domain] Cd Length: 1094 Bit Score: 920.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 126 GSLCSICDGRVMRDERGRDVTPC-ECRYKICRDCFIDAQKESGM-CPGCKEPYKV--------GEYEEDLTD------QY 189
Cdd:PLN02436 36 GQTCQICGDEIELTVDGEPFVACnECAFPVCRPCYEYERREGNQaCPQCKTRYKRikgsprveGDEEEDDIDdlenefDY 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 190 SNNGALPLPAPNG---SKRNPNNMS-VMKRNQNGEFD----------------------------------HNKWLFETQ 231
Cdd:PLN02436 116 GNNGLDPEQVAEAmlsSRLNTGRHSnVSGIATPSELDsappgsqiplltygeedveissdrhalivppstgHGNRVHPMP 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 232 -------------------GTYGVGNAYWP-------------------QDDMYGDDALKAGMLDPEKPW-----KPLSR 268
Cdd:PLN02436 196 fpdssaslqprpmvpqkdlAVYGYGSVAWKdrmeewkkkqneklqvvkhEGGNDGGNNDGDELDDPDLPMmdegrQPLSR 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 269 VTPIPSGIISPYRLLILVRFVVLIFFLHWRVVNPNKDAVWLWIMSITCEIWFGFSWILDQVPKLCPVNRST---DLAVLH 345
Cdd:PLN02436 276 KLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETyldRLSLRY 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 346 EKFDSPSpsnptgrsDLPGMDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAASFADL 425
Cdd:PLN02436 356 EKEGKPS--------ELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARK 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 426 WVPFCRKHNIEPRNPESYFSLKVDPTKNKSRTDFVKDRRRVKREYDEFKVRINGLpdsirrrsdafnareeMKMMKHMKE 505
Cdd:PLN02436 428 WVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINAL----------------VATAQKVPE 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 506 SGadpsepvkvlkstW-MADGTHWPGTWATpssehakgDHAGILQVMLKPPspdplfGSADDDkildftevDTRLPMFVY 584
Cdd:PLN02436 492 DG-------------WtMQDGTPWPGNNVR--------DHPGMIQVFLGHS------GVRDVE--------GNELPRLVY 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 585 VSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMD-RGGEDICYIQFPQRFEGIDPS 663
Cdd:PLN02436 537 VSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDpQSGKKICYVQFPQRFDGIDRH 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 664 DRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPPFADKD-------------------SDNKDGKKIEGS 724
Cdd:PLN02436 617 DRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPpgktcncwpkwcclccgsrKKKKKKKSKEKK 696
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 725 ETPAMNASefdpnldvnllpKRFGNSTMLAESIPVAEFQGRPLAdhPAIKFGRPLG---VLRA---------PREPLDAT 792
Cdd:PLN02436 697 KKKNREAS------------KQIHALENIEEGIEGSNNEKSSET--PQLKLEKKFGqspVFVAstllenggvPRNASPAS 762
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 793 TVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSV 872
Cdd:PLN02436 763 LLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSV 842
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 873 EIFFSKNNA--FLASKRLKILQRLSYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAI 950
Cdd:PLN02436 843 EIFLSRHCPiwYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGI 922
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 951 LEVKWSGVELEQWWRNEQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSKSAgedEDDMFADLYIVKWSSLMVPPIVI 1030
Cdd:PLN02436 923 LEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAA---DDGEFSELYLFKWTSLLIPPTTL 999
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 1031 AMTNIIAIAVAFSRTIYSANPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSISPPQ 1110
Cdd:PLN02436 1000 LIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFV 1079
|
....
gi 356501469 1111 GADG 1114
Cdd:PLN02436 1080 SKGG 1083
|
|
| PLN02893 |
PLN02893 |
Cellulose synthase-like protein |
265-1047 |
2.73e-126 |
|
Cellulose synthase-like protein
Pssm-ID: 215483 [Multi-domain] Cd Length: 734 Bit Score: 403.70 E-value: 2.73e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 265 PLSRVTPIPsgIISPYRLLILVR-FVVLIFFLHW--RVVNPNKDAVWLWIMSitCEIWFGFSWILDQVPKLCPVNRSTDL 341
Cdd:PLN02893 13 PLHTCHPMR--RTIANRVFAVVYsCAILALLYHHviALLHSTTTLITLLLLL--ADIVLAFMWATTQAFRMCPVHRRVFI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 342 AVLhEKFdspspsnpTGRSDLPGMDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFEAMAEAAS 421
Cdd:PLN02893 89 EHL-EHY--------AKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 422 FADLWVPFCRKHNIEPRNPESYFSlkvdpTKNKSRTDfvkDRRRVKREYDEFKVRINGLPDSiRRRSDAFNAREEmkmmk 501
Cdd:PLN02893 160 FATHWLPFCKKNKIVERCPEAYFS-----SNSHSWSP---ETEQIKMMYESMKVRVENVVER-GKVSTDYITCDQ----- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 502 hmkESGAdpsepvkvlKSTWmadgthwpgtwatpSSEHAKGDHAGILQVMLKppspdplfgSADDDKILDFTevdtrLPM 581
Cdd:PLN02893 226 ---EREA---------FSRW--------------TDKFTRQDHPTVIQVLLE---------SGKDKDITGHT-----MPN 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 582 FVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRGGE-DICYIQFPQRFEGI 660
Cdd:PLN02893 266 LIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDpKLGYVQFPQIFHGI 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 661 DPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGfdPPfadkdsdnkdgKKIEGSETPAMNasefdPNLDV 740
Cdd:PLN02893 346 NKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG--GP-----------SSLILPEIPELN-----PDHLV 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 741 NllpKRFGNSTMLAesipvaefqgrpLADHpaikfgrplgvlraprepldattvaeavsVISCWYEDKTEWGDRVGWIYG 820
Cdd:PLN02893 408 D---KSIKSQEVLA------------LAHH-----------------------------VAGCNYENQTNWGSKMGFRYG 443
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 821 SVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNN-AFLASKRLKILQRLSYLNV 899
Cdd:PLN02893 444 SLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSpITFGVKSIGLLMGLGYAHY 523
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 900 GIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIA-FLIYLLiitvcLVMLA----ILEVKWSGVELEQWWRNEQFWLISG 974
Cdd:PLN02893 524 AFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPwFFLYIF-----LFLGAygqdLLDFLLSGGTIQRWWNDQRMWMIRG 598
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 356501469 975 TSAHLAAVVQGLLKVMAGIEISFTLTSKsAGEDEDDMFADLYIVKW---SSLMVPPIVIAMTNIiaiaVAFSRTIY 1047
Cdd:PLN02893 599 LSSFLFGLVEFLLKTLGISTFGFNVTSK-VVDEEQSKRYEQGIFEFgvsSPMFLPLTTAAIINL----VSFLWGIA 669
|
|
| PLN02190 |
PLN02190 |
cellulose synthase-like protein |
256-1080 |
2.85e-106 |
|
cellulose synthase-like protein
Pssm-ID: 215122 [Multi-domain] Cd Length: 756 Bit Score: 350.70 E-value: 2.85e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 256 MLDPEKPWKPLSRVTPIPSGIISPYRLLILVRFVVLIFFlhwRVVNPNKDAVwLWIMSITCEIWFGFSWILDQVPKLCPV 335
Cdd:PLN02190 1 MADSSSSLPPLCERISHKSYFLRAVDLTILGLLFSLLLY---RILHMSENDT-VWLVAFLCESCFSFVWLLITCIKWSPA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 336 NrstdlavlhekfDSPSPSNPTGR-SDLPGMDLFVSTADPEKEPPLTTANTILSILAVDYPVEKLACYISDDGGALLTFE 414
Cdd:PLN02190 77 E------------YKPYPDRLDERvHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYF 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 415 AMAEAASFADLWVPFCRKHNIEPRNPESYFSLKVDPTKNksrTDFVKDRRRVKREYDEFKVRInglpDSIRRRSDAFNAR 494
Cdd:PLN02190 145 SLKEASKFAKIWVPFCKKYNVRVRAPFRYFLNPPVATED---SEFSKDWEMTKREYEKLSRKV----EDATGDSHWLDAE 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 495 EEMKMMKHMKESgaDPSEPVKVLkstWMADGthwpgtwatpssehakgdhagilqvmlkppspdplfGSADDDKIldfte 574
Cdd:PLN02190 218 DDFEAFSNTKPN--DHSTIVKVV---WENKG------------------------------------GVGDEKEV----- 251
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 575 vdtrlPMFVYVSREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMC-FMMDRGGEDIC-YIQ 652
Cdd:PLN02190 252 -----PHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCiFLQKSKNSNHCaFVQ 326
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 653 FPQRFegidpSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALYGFDPpfadkdsdnkDGKKIEGSETpAMNAS 732
Cdd:PLN02190 327 FPQEF-----YDSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSS----------DDLEDDGSLS-SVATR 390
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 733 EFdpnLDVNLLPKRFGNSTMLAESIpVAEFQGRPladhpaikfgrplgvlrAPREPLdATTVAEAVSVISCWYEDKTEWG 812
Cdd:PLN02190 391 EF---LAEDSLAREFGNSKEMVKSV-VDALQRKP-----------------NPQNSL-TNSIEAAQEVGHCHYEYQTSWG 448
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 813 DRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFLA--SKRLKI 890
Cdd:PLN02190 449 NTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGmfCRKIRF 528
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 891 LQRLSYLNVgIYPFTSLFLVVYCFLPALSLFSGSFIVETLSiafliyLLIITVCLVMLAILEVKWS----GVELEQWWRN 966
Cdd:PLN02190 529 RQRLAYLYV-FTCLRSIPELIYCLLPAYCLLHNSALFPKGV------YLGIIVTLVGMHCLYTLWEfmslGFSVQSWYVS 601
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 967 EQFWLISGTSAHLAAVVQGLLKVMAGIEISFTLTSK-------------SAGEDeDDMFADLYIVKW--SSLMVPPIVIA 1031
Cdd:PLN02190 602 QSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKtmpetksgsgsgpSQGED-DGPNSDSGKFEFdgSLYFLPGTFIV 680
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 356501469 1032 MTNIIAIA---VAFSRTIYSANPQWSKfIGGAFFSFWVLAHLYPFAKGLMGR 1080
Cdd:PLN02190 681 LVNLAALAgflVGLQRSSYSHGGGGSG-LAEACGCILVVMLFLPFLKGLFEK 731
|
|
| zf-RING_4 |
pfam14570 |
RING/Ubox like zinc-binding domain; |
129-176 |
1.05e-17 |
|
RING/Ubox like zinc-binding domain;
Pssm-ID: 405286 [Multi-domain] Cd Length: 47 Bit Score: 77.66 E-value: 1.05e-17
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 356501469 129 CSICDGRVmrDERGRDVTPCECRYKICRDCFIDAQK-ESGMCPGCKEPY 176
Cdd:pfam14570 1 CPLCDEKL--DETDKDFYPCECGYQICRFCYHDILEnEGGRCPGCREPY 47
|
|
| CESA_CelA_like |
cd06421 |
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of ... |
584-875 |
5.65e-15 |
|
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Pssm-ID: 133043 [Multi-domain] Cd Length: 234 Bit Score: 75.69 E-value: 5.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 584 YVSREKRPGYdhnkKAGAMN-ALVRasailSNGPFILNLDCDH-----YIynckavREGMCFMMDRggEDICYIQFPQRF 657
Cdd:cd06421 62 YLTRPDNRHA----KAGNLNnALAH-----TTGDFVAILDADHvptpdFL------RRTLGYFLDD--PKVALVQTPQFF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 658 EGIDP----SDRYANHNTVFFDGNMRALDGLQGPMYVGTGCMFRRFALygfdppfadkdsdnkdgkkiegsetpamnase 733
Cdd:cd06421 125 YNPDPfdwlADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREAL-------------------------------- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 734 fdpnldvnllpkrfgnstmlaesipvaefqgrpladhpaikfgrplgvlraprepldattvaeavsviscwyedktewgD 813
Cdd:cd06421 173 -------------------------------------------------------------------------------D 173
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 356501469 814 RVGWIY-GSVTEDVVTGYRMHNRGWRSVYcITKRDAFrGSAPINLTDRLHQVLRWATGSVEIF 875
Cdd:cd06421 174 EIGGFPtDSVTEDLATSLRLHAKGWRSVY-VPEPLAA-GLAPETLAAYIKQRLRWARGMLQIL 234
|
|
| BcsA |
COG1215 |
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ... |
816-957 |
4.28e-12 |
|
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];
Pssm-ID: 440828 [Multi-domain] Cd Length: 303 Bit Score: 68.23 E-value: 4.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 816 GWIYGSVTEDVVTGYRMHNRGWRSVYCitkRDAF-RGSAPINLTDRLHQVLRWATGSVEIFFsKNNAFLASKRLKILQRL 894
Cdd:COG1215 160 GFDEDTLGEDLDLSLRLLRAGYRIVYV---PDAVvYEEAPETLRALFRQRRRWARGGLQLLL-KHRPLLRPRRLLLFLLL 235
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 356501469 895 SYLNVGIYPFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAIL--EVKWSG 957
Cdd:COG1215 236 LLLPLLLLLLLLALLALLLLLLPALLLALLLALRRRRLLLPLLHLLYGLLLLLAALRgkKVVWKK 300
|
|
| bcsA |
PRK11498 |
cellulose synthase catalytic subunit; Provisional |
813-898 |
3.79e-09 |
|
cellulose synthase catalytic subunit; Provisional
Pssm-ID: 236918 [Multi-domain] Cd Length: 852 Bit Score: 60.81 E-value: 3.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 813 DRVGWI-YGSVTEDVVTGYRMHNRGWRSVYCITKRDAfrGSAPINLTDRLHQVLRWATGSVEIFFSKNNafLASKRLKIL 891
Cdd:PRK11498 431 DEIGGIaVETVTEDAHTSLRLHRRGYTSAYMRIPQAA--GLATESLSAHIGQRIRWARGMVQIFRLDNP--LTGKGLKLA 506
|
....*..
gi 356501469 892 QRLSYLN 898
Cdd:PRK11498 507 QRLCYAN 513
|
|
| vRING-HC-C4C4_RBBP6 |
cd16620 |
Variant RING finger, HC subclass (C4C4-type), found in retinoblastoma-binding protein 6 (RBBP6) ... |
128-175 |
1.05e-05 |
|
Variant RING finger, HC subclass (C4C4-type), found in retinoblastoma-binding protein 6 (RBBP6) and similar proteins; RBBP6, also known as proliferation potential-related protein, protein P2P-R, retinoblastoma-binding Q protein 1 (RBQ-1), or p53-associated cellular protein of testis (PACT), is a nuclear E3 ubiquitin-protein ligase involved in multiple processes, such as the control of gene expression, mitosis, cell differentiation, and cell apoptosis. It plays a role in both promoting and inhibiting apoptosis in many human cancers, including esophageal, lung, hepatocellular, and colon cancers, familial myeloproliferative neoplasms, as well as in human immunodeficiency virus-associated nephropathy (HIVAN). It functions as an Rb- and p53-binding protein that plays an important role in chaperone-mediated ubiquitination and possibly in protein quality control. It acts as a scaffold protein to promote the assembly of the p53/TP53-MDM2 complex, resulting in an increase of MDM2-mediated ubiquitination and degradation of p53/TP53, and leading to both apoptosis and cell growth. It is also a double-stranded RNA-binding protein that plays a role in mRNA processing by regulating the human polyadenylation machinery and modulating expression of mRNAs with AU-rich 3' untranslated regions (UTRs). Moreover, RBBP6 ubiquitinates and destabilizes the transcriptional repressor ZBTB38 that negatively regulates transcription and levels of the MCM10 replication factor on chromatin. Furthermore, RBBP6 is involved in tunicamycin-induced apoptosis by mediating protein kinase (PKR) activation. RBBP6 contains an N-terminal ubiquitin-like domain and a C4C4-type RING finger, whose overall folding is similar to that of the typical C3HC4-type RING-HC finger. RBBP6 interacts with chaperones Hsp70 and Hsp40 through its N-terminal ubiquitin-like domain. It promotes the ubiquitination of p53 by Hdm2 in an E4-like manner through its RING finger. It also interacts directly with the pro-proliferative transcription factor Y-box-binding protein-1 (YB-1) via its RING finger.
Pssm-ID: 438282 [Multi-domain] Cd Length: 55 Bit Score: 43.93 E-value: 1.05e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 356501469 128 LCSICDgRVMRDERgrdVTPCeCRYKICRDCFIDAQKES-GMCPGCKEP 175
Cdd:cd16620 5 KCPICK-DLMKDAV---LTPC-CGNSFCDECIRTALLEEdFTCPTCKEP 48
|
|
| mRING-HC-C4C4_CNOT4 |
cd16618 |
Modified RING finger, HC subclass (C4C4-type), found in CCR4-NOT transcription complex subunit ... |
143-172 |
1.69e-03 |
|
Modified RING finger, HC subclass (C4C4-type), found in CCR4-NOT transcription complex subunit 4 (NOT4) and similar proteins; NOT4, also known as CCR4-associated factor 4, E3 ubiquitin-protein ligase CNOT4, or potential transcriptional repressor NOT4, is a component of the multifunctional CCR4-NOT complex, a global regulator of RNA polymerase II transcription. It associates with polysomes and contributes to the negative regulation of protein synthesis. NOT4 functions as an E3 ubiquitin-protein ligase that interacts with a specific E2, Ubc4/5 in yeast, and the ortholog UbcH5B in humans, and ubiquitylates a wide range of substrates, including ribosome-associated factors. Thus, it plays a role in cotranslational quality control (QC) through ribosome-associated ubiquitination and degradation of aberrant peptides. NOT4 contains a C4C4-type RING finger motif, whose overall folding is similar to that of the C3HC4-type RING-HC finger, a central RNA recognition motif (RRM), and a C-terminal domain predicted to be unstructured.
Pssm-ID: 438280 [Multi-domain] Cd Length: 47 Bit Score: 37.22 E-value: 1.69e-03
10 20 30
....*....|....*....|....*....|..
gi 356501469 143 RDVTPCECRYKICRDCF--IDaQKESGMCPGC 172
Cdd:cd16618 15 LNFFPCPCGYQICLFCWhrIR-EDENGRCPAC 45
|
|
| CESA_NdvC_like |
cd06435 |
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase; ... |
813-875 |
1.80e-03 |
|
NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase; NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Pssm-ID: 133057 [Multi-domain] Cd Length: 236 Bit Score: 41.23 E-value: 1.80e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 356501469 813 DRVG-WIYGSVTEDVVTGYRMHNRGWRSVYciTKRDAFRGSAPINLTDRLHQVLRWATGSVEIF 875
Cdd:cd06435 171 DDVGgWDEWCITEDSELGLRMHEAGYIGVY--VAQSYGHGLIPDTFEAFKKQRFRWAYGAVQIL 232
|
|
| SLATT_5 |
NF033631 |
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally ... |
874-952 |
2.03e-03 |
|
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family contains an additional C-terminal alpha-helix, and strictly associates with a reverse transcriptase domain, part of a predicted retroelement with diversity-generating potential.
Pssm-ID: 468117 Cd Length: 182 Bit Score: 40.36 E-value: 2.03e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 356501469 874 IFFSKNNAFLASKRLKILQRLSYLNVGIYpftSLFLVvycflpALSLFSGSFIVETLSIAFLIYLLIITVCLVMLAILE 952
Cdd:NF033631 5 IWITRKARFNASRRLLRKNFLSTFSLSFY---SIYLI------ALSLLQLIFPNNFSNNLLSIISIILSVLVLVISLLI 74
|
|
| SLATT_5 |
pfam18160 |
SMODS and SLOG-associating 2TM effector domain family 5; The SLATT domain contains two ... |
874-951 |
3.52e-03 |
|
SMODS and SLOG-associating 2TM effector domain family 5; The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family contains an additional C-terminal alpha-helix, and strictly associates with a reverse transcriptase domain, part of a predicted retroelement with diversity-generating potential.
Pssm-ID: 436319 Cd Length: 191 Bit Score: 39.99 E-value: 3.52e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 356501469 874 IFFSKNNAFLASKRLKILQRLSYLNVGIYpftSLFLVVycflpaLSLFSGSFIVETLSIAFLIYLLIITVCLVMLAIL 951
Cdd:pfam18160 12 IWVTKKARFNAAERLLRKNKASTFTISLL---SVYLII------ISLLSNFFSELTISSNLLAFLTIILSILVLVISL 80
|
|
| MFS_1 |
pfam07690 |
Major Facilitator Superfamily; |
970-1107 |
3.64e-03 |
|
Major Facilitator Superfamily;
Pssm-ID: 429598 [Multi-domain] Cd Length: 344 Bit Score: 40.86 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 970 WLISGTSAHLAAVVQGLLKVMAGIEISFTLT-SKSAGEDEDDMFADLYIVKWSSLMVPPIVIAMTNIIAIAVAFS----- 1043
Cdd:pfam07690 143 LLASLFGWRAAFLILAILSLLAAVLLLLPRPpPESKRPKPAEEARLSLIVAWKALLRDPVLWLLLALLLFGFAFFgllty 222
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 356501469 1044 RTIYSANPQWSKFIGGAFFSFWVL--AHLYPFAKGLMGRRGKTPTIVFVWSGLIAITLSLLWVSIS 1107
Cdd:pfam07690 223 LPLYQEVLGLSALLAGLLLGLGGLlgAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLT 288
|
|
| Glyco_trans_2_3 |
pfam13632 |
Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include ... |
813-936 |
3.96e-03 |
|
Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.
Pssm-ID: 433365 [Multi-domain] Cd Length: 192 Bit Score: 39.63 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356501469 813 DRVGWIYGSVTEDVVTGYRMHNRGWRSVYcITKRdAFRGSAPINLTDRLHQVLRWATGsveiffskNNAFLASKRLKILQ 892
Cdd:pfam13632 86 EVGGWDDGSVSEDFDFGLRLQRAGYRVRF-APYS-AVYEKSPLTFRDFLRQRRRWAYG--------CLLILLIRLLGYLG 155
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 356501469 893 RLSYlnvgiypFTSLFLVVYCFLPALSLFSGSFIVETLSIAFLI 936
Cdd:pfam13632 156 TLLW-------SGLPLALLLLLLFSISSLALVLLLLALLAGLLL 192
|
|
| bcsA |
PRK11498 |
cellulose synthase catalytic subunit; Provisional |
356-408 |
4.27e-03 |
|
cellulose synthase catalytic subunit; Provisional
Pssm-ID: 236918 [Multi-domain] Cd Length: 852 Bit Score: 41.16 E-value: 4.27e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 356501469 356 PTGRSDLPGMDLFVSTADpekEPPLTTANTILSILAVDYPVEKLACYISDDGG 408
Cdd:PRK11498 253 PKDMSLWPTVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGG 302
|
|
| |
