|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-198 |
6.42e-143 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 401.85 E-value: 6.42e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00156 76 GASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00156 156 GGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLI 235
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00156 236 NPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-198 |
1.95e-74 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 229.29 E-value: 1.95e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 78
Cdd:COG1290 95 GASLFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 79 VWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEK----IPFHPYFTFKDSITFVMMtsL 153
Cdd:COG1290 175 LFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVF--L 252
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 355343542 154 LIMLCLINPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:COG1290 253 GVFALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRA 297
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-121 |
1.06e-50 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 162.54 E-value: 1.06e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 78
Cdd:cd00284 78 GASMFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEW 157
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 355343542 79 VWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSN 121
Cdd:cd00284 158 LWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
3-168 |
1.16e-48 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 156.25 E-value: 1.16e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 3 SMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHF-VLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCL 159
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 355343542 160 INPYILGDP 168
Cdd:pfam13631 161 INPIWLGGP 169
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-198 |
6.42e-143 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 401.85 E-value: 6.42e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00156 76 GASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00156 156 GGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLI 235
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00156 236 NPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-198 |
1.17e-127 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 364.22 E-value: 1.17e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00119 87 GASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIW 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00119 167 GGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALF 246
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00119 247 SPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-198 |
2.92e-126 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 360.76 E-value: 2.92e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00145 87 GASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVW 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00145 167 GGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLF 246
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00145 247 FPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-198 |
3.19e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 358.22 E-value: 3.19e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00074 87 GASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIW 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00074 167 GGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLF 246
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00074 247 SPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-198 |
7.90e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 356.53 E-value: 7.90e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00191 83 GASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLW 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00191 163 GGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLF 242
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00191 243 SPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRS 280
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-198 |
4.21e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 352.79 E-value: 4.21e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00100 86 GASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00100 166 GGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLF 245
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00100 246 SPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRS 283
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-198 |
4.45e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 352.42 E-value: 4.45e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00131 86 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIW 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00131 166 GGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALF 245
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00131 246 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRS 283
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-198 |
3.19e-117 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 337.80 E-value: 3.19e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00016 87 GASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLW 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00016 167 GGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLL 246
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00016 247 WPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRS 284
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-198 |
1.05e-111 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 323.58 E-value: 1.05e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00034 86 GASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIW 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00034 166 GGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALL 245
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00034 246 FPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRS 283
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-198 |
1.24e-99 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 292.98 E-value: 1.24e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00224 87 GASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIW 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00224 167 GGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLF 246
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00224 247 EPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRS 284
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-198 |
2.60e-99 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 292.37 E-value: 2.60e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00022 85 GASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVW 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00022 165 GGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYF 244
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00022 245 APNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRS 282
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-198 |
2.50e-96 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 284.68 E-value: 2.50e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00053 87 GASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVW 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLI 160
Cdd:MTH00053 167 GGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFL 246
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00053 247 FPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-198 |
1.08e-75 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 231.37 E-value: 1.08e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00086 75 GASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTsLLIMLCLI 160
Cdd:MTH00086 155 GGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLF 233
|
170 180 190
....*....|....*....|....*....|....*...
gi 355343542 161 NPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00086 234 YPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRA 271
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-198 |
1.95e-74 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 229.29 E-value: 1.95e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 78
Cdd:COG1290 95 GASLFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 79 VWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEK----IPFHPYFTFKDSITFVMMtsL 153
Cdd:COG1290 175 LFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVF--L 252
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 355343542 154 LIMLCLINPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:COG1290 253 GVFALLAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRA 297
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-198 |
3.05e-74 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 228.28 E-value: 3.05e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00033 83 GASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIW 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLClI 160
Cdd:MTH00033 163 GGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-I 241
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 355343542 161 NPYI---LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00033 242 EPRIetlLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRS 282
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-198 |
7.29e-59 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 188.27 E-value: 7.29e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMHTWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:MTH00046 77 GVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIV 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNI-EKIPFHPYFTFKDSITFVMMTSLLIMLCL 159
Cdd:MTH00046 157 GGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLF 236
|
170 180 190
....*....|....*....|....*....|....*....
gi 355343542 160 INPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:MTH00046 237 VSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRS 275
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-121 |
1.06e-50 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 162.54 E-value: 1.06e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 78
Cdd:cd00284 78 GASMFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEW 157
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 355343542 79 VWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSN 121
Cdd:cd00284 158 LWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
3-168 |
1.16e-48 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 156.25 E-value: 1.16e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 3 SMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 80
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 81 GGFAVDNATLNRFFTFHF-VLPFVIAAMAAIHLFFLHQTGSNNPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCL 159
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 355343542 160 INPYILGDP 168
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-119 |
1.39e-47 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 154.08 E-value: 1.39e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 78
Cdd:pfam00033 69 GASMFFLMLYLHIFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEW 148
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 355343542 79 VWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTG 119
Cdd:pfam00033 149 IWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
122-198 |
4.25e-24 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 92.32 E-value: 4.25e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 355343542 122 NPIGLNGNIEKIPFHPYFTFKDSITFVMMTSLLIMLCLINPYILGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRA 77
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
1-124 |
1.66e-19 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 82.45 E-value: 1.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 1 GASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 78
Cdd:PRK03735 97 GASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTL 176
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 355343542 79 VWGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPI 124
Cdd:PRK03735 177 LRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
2-124 |
2.01e-14 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 68.59 E-value: 2.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355343542 2 ASMFFICIYLHVGRGIYYGSYMYMH--TWMIGTLILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWV 79
Cdd:CHL00070 90 ASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 169
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 355343542 80 WGGFAVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPI 124
Cdd:CHL00070 170 RGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
173-198 |
3.06e-11 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 57.49 E-value: 3.06e-11
10 20
....*....|....*....|....*.
gi 355343542 173 PANPLVTPVHIQPEWYFLFAYAILRS 198
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRS 26
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
152-197 |
5.45e-04 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 38.83 E-value: 5.45e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 355343542 152 SLLIMLCLINPYILGDPdnfvpANPLVTPVHIQPEWYFLFAYAILR 197
Cdd:CHL00058 49 ACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILR 89
|
|
|