cytochrome b, partial (mitochondrion) [Amblytropidia mysteca]
cytochrome b( domain architecture ID 999997)
cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain; contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis
List of domain hits
Name | Accession | Description | Interval | E-value | ||
CYTB super family | cl33360 | cytochrome b; Provisional |
1-78 | 9.99e-52 | ||
cytochrome b; Provisional The actual alignment was detected with superfamily member MTH00156: Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 164.57 E-value: 9.99e-52
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Name | Accession | Description | Interval | E-value | |||
CYTB | MTH00156 | cytochrome b; Provisional |
1-78 | 9.99e-52 | |||
cytochrome b; Provisional Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 164.57 E-value: 9.99e-52
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QcrB/PetB | COG1290 | Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-78 | 1.61e-29 | |||
Cytochrome b subunit of the bc complex [Energy production and conversion]; Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 107.18 E-value: 1.61e-29
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Cytochrome_b_N | cd00284 | Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-77 | 8.53e-28 | |||
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD. Pssm-ID: 238176 Cd Length: 200 Bit Score: 98.98 E-value: 8.53e-28
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Cytochrome_B | pfam00033 | Cytochrome b/b6/petB; |
1-78 | 5.54e-26 | |||
Cytochrome b/b6/petB; Pssm-ID: 306530 Cd Length: 189 Bit Score: 93.99 E-value: 5.54e-26
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Name | Accession | Description | Interval | E-value | |||
CYTB | MTH00156 | cytochrome b; Provisional |
1-78 | 9.99e-52 | |||
cytochrome b; Provisional Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 164.57 E-value: 9.99e-52
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CYTB | MTH00119 | cytochrome b; Provisional |
1-78 | 1.08e-49 | |||
cytochrome b; Provisional Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 159.68 E-value: 1.08e-49
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CYTB | MTH00100 | cytochrome b; Provisional |
1-78 | 3.98e-49 | |||
cytochrome b; Provisional Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 158.26 E-value: 3.98e-49
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CYTB | MTH00074 | cytochrome b; Provisional |
1-78 | 7.43e-48 | |||
cytochrome b; Provisional Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 155.22 E-value: 7.43e-48
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CYTB | MTH00191 | cytochrome b; Provisional |
1-78 | 1.36e-45 | |||
cytochrome b; Provisional Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 148.91 E-value: 1.36e-45
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CYTB | MTH00131 | cytochrome b; Provisional |
1-78 | 1.38e-45 | |||
cytochrome b; Provisional Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 149.42 E-value: 1.38e-45
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CYTB | MTH00145 | cytochrome b; Provisional |
1-77 | 3.68e-45 | |||
cytochrome b; Provisional Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 148.13 E-value: 3.68e-45
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CYTB | MTH00016 | cytochrome b; Validated |
1-78 | 8.03e-43 | |||
cytochrome b; Validated Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 142.12 E-value: 8.03e-43
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CYTB | MTH00034 | cytochrome b; Validated |
1-78 | 5.12e-42 | |||
cytochrome b; Validated Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 139.84 E-value: 5.12e-42
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CYTB | MTH00022 | cytochrome b; Validated |
1-78 | 2.18e-38 | |||
cytochrome b; Validated Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 130.59 E-value: 2.18e-38
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CYTB | MTH00224 | cytochrome b; Provisional |
1-78 | 2.25e-36 | |||
cytochrome b; Provisional Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 125.42 E-value: 2.25e-36
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CYTB | MTH00053 | cytochrome b; Provisional |
1-78 | 8.48e-35 | |||
cytochrome b; Provisional Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 120.97 E-value: 8.48e-35
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QcrB/PetB | COG1290 | Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-78 | 1.61e-29 | |||
Cytochrome b subunit of the bc complex [Energy production and conversion]; Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 107.18 E-value: 1.61e-29
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Cytochrome_b_N | cd00284 | Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-77 | 8.53e-28 | |||
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD. Pssm-ID: 238176 Cd Length: 200 Bit Score: 98.98 E-value: 8.53e-28
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CYTB | MTH00033 | cytochrome b; Provisional |
1-78 | 2.40e-27 | |||
cytochrome b; Provisional Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 101.55 E-value: 2.40e-27
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CYTB | MTH00086 | cytochrome b; Provisional |
1-78 | 2.78e-26 | |||
cytochrome b; Provisional Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 98.09 E-value: 2.78e-26
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Cytochrome_B | pfam00033 | Cytochrome b/b6/petB; |
1-78 | 5.54e-26 | |||
Cytochrome b/b6/petB; Pssm-ID: 306530 Cd Length: 189 Bit Score: 93.99 E-value: 5.54e-26
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Cytochrom_B_N_2 | pfam13631 | Cytochrome b(N-terminal)/b6/petB; |
4-78 | 1.99e-19 | |||
Cytochrome b(N-terminal)/b6/petB; Pssm-ID: 433364 Cd Length: 169 Bit Score: 76.51 E-value: 1.99e-19
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CYTB | MTH00046 | cytochrome b; Validated |
2-76 | 2.79e-18 | |||
cytochrome b; Validated Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 76.56 E-value: 2.79e-18
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PRK03735 | PRK03735 | cytochrome b6; Provisional |
2-78 | 5.37e-10 | |||
cytochrome b6; Provisional Pssm-ID: 179639 Cd Length: 223 Bit Score: 52.79 E-value: 5.37e-10
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petB | CHL00070 | cytochrome b6 |
3-78 | 7.79e-06 | |||
cytochrome b6 Pssm-ID: 177009 Cd Length: 215 Bit Score: 41.24 E-value: 7.79e-06
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Blast search parameters | ||||
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