|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-111 |
2.92e-35 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 116.53 E-value: 2.92e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSD 80
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSD 80
|
90 100 110
....*....|....*....|....*....|.
gi 354464956 81 LNSLISFFMLLMFIFGGFYMEWWYGKLVWLI 111
Cdd:MTH00092 81 FSSLISFFMLMIFIFFGFYMEWWYGKLIWVI 111
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
22-107 |
3.18e-12 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 57.43 E-value: 3.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 22 NFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVS-DLNSLISFFMLLMFIF---GG 97
Cdd:pfam00507 4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSfRELGWFGFVEMLIFIAillVG 83
|
90
....*....|
gi 354464956 98 FYMEWWYGKL 107
Cdd:pfam00507 84 LVYAWKKGAL 93
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-109 |
4.41e-10 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 52.55 E-value: 4.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVFYIGNFVLSCKDFY-KNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVS 79
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*
gi 354464956 80 DLNS-----LISFFMLLMFIFGGFYMEWWYGKLVW 109
Cdd:MTH00148 81 LGSSfsvwsLTSLFIFLLILILGLFHEWNEGSLDW 115
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
2-109 |
1.88e-09 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 50.89 E-value: 1.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 2 LVLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVS-- 79
Cdd:COG0838 6 LPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVfr 85
|
90 100 110
....*....|....*....|....*....|..
gi 354464956 80 --DLNSLISFFMLLMFIFGGFYMEWWYGKLVW 109
Cdd:COG0838 86 elGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-109 |
2.05e-08 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 47.97 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSD 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80
|
90 100 110
....*....|....*....|....*....|..
gi 354464956 81 LNSLISFFM---LLMFIFGGFYMEWWYGKLVW 109
Cdd:MTH00203 81 QLSSLSLLLaflFLILLTLGLIYEWLQGGLEW 112
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
3-109 |
2.73e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 45.15 E-value: 2.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 3 VLVMVVLFTLVLLFVFYIGNFVLSCKDFY-KNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSDL 81
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLSKKSIMdREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 354464956 82 NSLISFFMLLMFIF-----GGFYMEWWYGKLVW 109
Cdd:MTH00161 81 TSNMMSWLITSSFFilillLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
4-109 |
4.15e-07 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 44.60 E-value: 4.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 4 LVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGI-----LV 78
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwasqLN 81
|
90 100 110
....*....|....*....|....*....|.
gi 354464956 79 SDLNSLISFFMLLMFIFGGFYMEWWYGKLVW 109
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEW 112
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
3-109 |
1.63e-06 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 43.33 E-value: 1.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 3 VLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGI-----L 77
Cdd:MTH00113 2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLpwainL 81
|
90 100 110
....*....|....*....|....*....|..
gi 354464956 78 VSDLNSLISFFMLLMFIFGGFYMEWWYGKLVW 109
Cdd:MTH00113 82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-109 |
3.66e-06 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 42.28 E-value: 3.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSD 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....
gi 354464956 81 LNSLISFFMLLMFIF-----GGFYMEWWYGKLVW 109
Cdd:MTH00042 81 LITNPSTLLPISLIFliiltIGLVYEWVNGGLEW 114
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
34-109 |
1.04e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 41.06 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 34 KISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGI-----LVSDLNSLISFFMLLMFIFGGFYMEWWYGKLV 108
Cdd:MTH00136 34 KLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgdqLPSPLLTFFWATAVLILLTLGLIYEWLQGGLE 113
|
.
gi 354464956 109 W 109
Cdd:MTH00136 114 W 114
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
4-109 |
1.34e-05 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 40.82 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 4 LVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVV-MFLGILVSDLN 82
Cdd:MTH00018 3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISfLFPWCVLYNQI 82
|
90 100 110
....*....|....*....|....*....|
gi 354464956 83 SLISFFMLLMFIFG---GFYMEWWYGKLVW 109
Cdd:MTH00018 83 APFGFWTMVGFLFIltlGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-111 |
3.94e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 39.59 E-value: 3.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVS- 79
Cdd:MTH00202 2 LLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVl 81
|
90 100 110
....*....|....*....|....*....|....*.
gi 354464956 80 ----DLNSLISFFMLLMFIFGGFYMEWWYGKLVWLI 111
Cdd:MTH00202 82 ksswSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
4-109 |
4.43e-05 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 39.46 E-value: 4.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 4 LVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSDLNS 83
Cdd:PRK06602 11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI 90
|
90 100 110
....*....|....*....|....*....|
gi 354464956 84 -LISFFMLLMFI---FGGFYMEWWYGKLVW 109
Cdd:PRK06602 91 gWLGFVEAMIFIlvlLVGLVYLWRKGALDW 120
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-109 |
5.77e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 39.15 E-value: 5.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVfyigNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFL----GI 76
Cdd:MTH00106 4 MLTLLTNTLLASLLVLI----AFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLplpwAS 79
|
90 100 110
....*....|....*....|....*....|....
gi 354464956 77 LVSDLNS-LISFFMLLMFIFGGFYMEWWYGKLVW 109
Cdd:MTH00106 80 QTNNLNTmLTMALLLISLLALSLAYEWTQKGLEW 113
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
1-109 |
3.42e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 37.00 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 1 MLVLVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVV-MFLGILVS 79
Cdd:MTH00055 5 FLGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISfLFPWCVVY 84
|
90 100 110
....*....|....*....|....*....|...
gi 354464956 80 DLNSLISFFMLLMFIF---GGFYMEWWYGKLVW 109
Cdd:MTH00055 85 NQIGLFGFWVMYLFLIiltIGLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
32-109 |
4.69e-04 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 36.76 E-value: 4.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 32 KNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSDLNS-----LISFFMLLMFIFGGFYMEWWYGK 106
Cdd:MTH00012 33 REKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTStsktvVYTSILFLLILVIGLIHEWREGS 112
|
...
gi 354464956 107 LVW 109
Cdd:MTH00012 113 LDW 115
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
3-110 |
6.26e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 36.41 E-value: 6.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 3 VLVMVVLFTLVLLFVFYIGNFVLSCKDFykNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEVVMFLGILVSDL- 81
Cdd:MTH00060 8 FFVFFLLFLVIYFFHSGLWNNKIYSGGF--SWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLl 85
|
90 100 110
....*....|....*....|....*....|
gi 354464956 82 -NSLISFFMLLMFIFGGFYMEWWYGKLVWL 110
Cdd:MTH00060 86 fYNFWYYYFFLLLLFLGFVVELFSGYVRWV 115
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
4-109 |
7.59e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 36.45 E-value: 7.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354464956 4 LVMVVLFTLVLLFVFYIGNFVLSCKDFYKNKISSFECGFVSVGKIQNSFSIHFFIMMLMFVIFDLEV-VMFLGILVSDLN 82
Cdd:MTH00030 13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEIsFLFPWSIVFNQL 92
|
90 100 110
....*....|....*....|....*....|
gi 354464956 83 SLISFFMLLMFIFG---GFYMEWWYGKLVW 109
Cdd:MTH00030 93 NLFSFWIVYTFLIVlaiGLAYEWIKGGLEW 122
|
|
|