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Conserved domains on  [gi|346974059|gb|EGY17511|]
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high-affinity nicotinic acid transporter [Verticillium dahliae VdLs.17]

Protein Classification

MFS transporter( domain architecture ID 999995)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
MFS super family cl28910
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
47-453 1.54e-109

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


The actual alignment was detected with superfamily member cd17327:

Pssm-ID: 475125 [Multi-domain]  Cd Length: 406  Bit Score: 331.14  E-value: 1.54e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  47 KIDWALIPFLALLYLLSFLDRTNIGNARLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVA 126
Cdd:cd17327    1 KLDLFILPLLCILYFLQYLDKSNISNAAVMGMKEDLKLVGNQYNWGNTVFYVGYIIFELPGNLLLQRFPPSKWLSVFIVL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 127 WAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMDGLG 206
Cdd:cd17327   81 WGLLTLLTAAVKNFGGLIALRFFLGLFESGVFPGFILYLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLAYGVFKILGVG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 207 NLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARFLTTPEKEEVLRRLEHDRSSL-ADEFDMRYFWDALKDWKIWVHMF 285
Cdd:cd17327  161 GLAGWRWLFIIEGLITIIIGLVIFFWLPDNPSKAWFLTEEEKELAVERLRANQTGKgDQKFKWKQIKEAFKDPRTWLLFL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 286 ITIGIYTPLYSYALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFptSILGFLLLIV 365
Cdd:cd17327  241 FFFCSQITNNGISNFLPLILKSLGFYSLQTNLLSVPIGALGAVSLLIAALLSDRFKKRGLFAIFACVL--ALVGSIILLA 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 366 SQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLKRGVGIAMHVGFGNLGGAISGFIYQSTHGPEFYPGHGTLLGTL 445
Cdd:cd17327  319 APNPPGAYFAAYILGGGSYAGFPILLSWISSNCAGYTKRATVLAIMLIFYNVGNIVAPQIFRAGDAPRYIPGNIALLVCA 398

                 ....*...
gi 346974059 446 TMSLVLSI 453
Cdd:cd17327  399 CVSIVLSV 406
 
Name Accession Description Interval E-value
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
47-453 1.54e-109

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 331.14  E-value: 1.54e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  47 KIDWALIPFLALLYLLSFLDRTNIGNARLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVA 126
Cdd:cd17327    1 KLDLFILPLLCILYFLQYLDKSNISNAAVMGMKEDLKLVGNQYNWGNTVFYVGYIIFELPGNLLLQRFPPSKWLSVFIVL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 127 WAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMDGLG 206
Cdd:cd17327   81 WGLLTLLTAAVKNFGGLIALRFFLGLFESGVFPGFILYLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLAYGVFKILGVG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 207 NLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARFLTTPEKEEVLRRLEHDRSSL-ADEFDMRYFWDALKDWKIWVHMF 285
Cdd:cd17327  161 GLAGWRWLFIIEGLITIIIGLVIFFWLPDNPSKAWFLTEEEKELAVERLRANQTGKgDQKFKWKQIKEAFKDPRTWLLFL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 286 ITIGIYTPLYSYALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFptSILGFLLLIV 365
Cdd:cd17327  241 FFFCSQITNNGISNFLPLILKSLGFYSLQTNLLSVPIGALGAVSLLIAALLSDRFKKRGLFAIFACVL--ALVGSIILLA 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 366 SQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLKRGVGIAMHVGFGNLGGAISGFIYQSTHGPEFYPGHGTLLGTL 445
Cdd:cd17327  319 APNPPGAYFAAYILGGGSYAGFPILLSWISSNCAGYTKRATVLAIMLIFYNVGNIVAPQIFRAGDAPRYIPGNIALLVCA 398

                 ....*...
gi 346974059 446 TMSLVLSI 453
Cdd:cd17327  399 CVSIVLSV 406
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
42-465 5.83e-38

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 142.32  E-value: 5.83e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  42 KKLLRKIDWALIPFLALLYLLSFLDRTNIGNArLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIP 121
Cdd:COG2271    1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVA-APPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 122 SIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVE 201
Cdd:COG2271   80 IGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 202 mdglgnLDGWAWIFILEGLLTFVVAIIAyfvmhdypntarflttpekeevlrrlehdrssladefdmryfwdalkdwkIW 281
Cdd:COG2271  160 ------AFGWRAAFLILGLPGLLLALLR--------------------------------------------------FW 183
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 282 VHMFITIGIYTPLYSYALFLPTI-VRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFpTSILGF 360
Cdd:COG2271  184 LLALAYFLVYFALYGFLTWLPTYlVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLL-LAALAL 262
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 361 LLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLkRGVGIAMHVGFGNLGGAIS----GFIYQSThgpefyp 436
Cdd:COG2271  263 LLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKA-RGTASGLVNTFGFLGGALGpllvGYLLDAT------- 334
                        410       420
                 ....*....|....*....|....*....
gi 346974059 437 GHGTLLGTLTMSLVLSIFMHIYLRRENAR 465
Cdd:COG2271  335 GYQAAFLLLAALALLAALLALLLLRETRK 363
MFS_1 pfam07690
Major Facilitator Superfamily;
66-422 1.23e-23

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 101.73  E-value: 1.23e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059   66 DRTNIGNARLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLA 145
Cdd:pfam07690  11 GRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  146 ARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEmdglgnLDGWAWIFILEGLLTFVV 225
Cdd:pfam07690  91 LRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLAS------LFGWRAAFLILAILSLLA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  226 AIIAYFVMhDYPNTARFLTTPEKEEVLRRLehdrssLADEFDMRYFWdalkdwkIWVHMFITIGIYtplYSYALFLPTIV 305
Cdd:pfam07690 165 AVLLLLPR-PPPESKRPKPAEEARLSLIVA------WKALLRDPVLW-------LLLALLLFGFAF---FGLLTYLPLYQ 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  306 RGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSILGFLLLIVSQNNQVKYAGCFFAAMGIYP 385
Cdd:pfam07690 228 EVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGL 307
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 346974059  386 NVPQGVAWNGNNIGGSlKRGVGIAMHVGFGNLGGAIS 422
Cdd:pfam07690 308 VFPALNALVSDLAPKE-ERGTASGLYNTAGSLGGALG 343
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
100-454 5.80e-15

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 76.26  E-value: 5.80e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  100 YVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMA 179
Cdd:TIGR00881  43 YGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVS 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  180 IFFSAATAAGAFGGLLArgiveMDGLGNLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARFltTPEKEEVLRRLEHDR 259
Cdd:TIGR00881 123 FWNCSHNVGGGLLPPLV-----LFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGL--PPAEEMPNEEPDGDA 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  260 SSLADEFDMR--YFWDALKDWKIWVHMFITIGIYTPLYSYALFLPT-IVRGLGYSNETAQLMTVPPYIVACVCCVTAGWY 336
Cdd:TIGR00881 196 EKKEEELTKKqiFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLyLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWL 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  337 ADR--VGQRGIFMIFFIAFPTSILGFLLLIVSQNNQVKYAgcFFAAMGIYPNVPQGVAWNgnniggslkrgvgIAMHVGF 414
Cdd:TIGR00881 276 SDKlfNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLI--CLFALGFLVYGPQMLIGV-------------IASELAP 340
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 346974059  415 GNLGGAISGFIyqsthgpEFYPGHGTLLGTLTMSLVLSIF 454
Cdd:TIGR00881 341 KKAAGTAAGFV-------GFFAYLGGILAGLPLGYLADGF 373
 
Name Accession Description Interval E-value
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
47-453 1.54e-109

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 331.14  E-value: 1.54e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  47 KIDWALIPFLALLYLLSFLDRTNIGNARLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVA 126
Cdd:cd17327    1 KLDLFILPLLCILYFLQYLDKSNISNAAVMGMKEDLKLVGNQYNWGNTVFYVGYIIFELPGNLLLQRFPPSKWLSVFIVL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 127 WAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMDGLG 206
Cdd:cd17327   81 WGLLTLLTAAVKNFGGLIALRFFLGLFESGVFPGFILYLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLAYGVFKILGVG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 207 NLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARFLTTPEKEEVLRRLEHDRSSL-ADEFDMRYFWDALKDWKIWVHMF 285
Cdd:cd17327  161 GLAGWRWLFIIEGLITIIIGLVIFFWLPDNPSKAWFLTEEEKELAVERLRANQTGKgDQKFKWKQIKEAFKDPRTWLLFL 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 286 ITIGIYTPLYSYALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFptSILGFLLLIV 365
Cdd:cd17327  241 FFFCSQITNNGISNFLPLILKSLGFYSLQTNLLSVPIGALGAVSLLIAALLSDRFKKRGLFAIFACVL--ALVGSIILLA 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 366 SQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLKRGVGIAMHVGFGNLGGAISGFIYQSTHGPEFYPGHGTLLGTL 445
Cdd:cd17327  319 APNPPGAYFAAYILGGGSYAGFPILLSWISSNCAGYTKRATVLAIMLIFYNVGNIVAPQIFRAGDAPRYIPGNIALLVCA 398

                 ....*...
gi 346974059 446 TMSLVLSI 453
Cdd:cd17327  399 CVSIVLSV 406
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
50-455 9.95e-40

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 146.95  E-value: 9.95e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  50 WALIPFLALLYLLSFLDRTNIGNARLAgIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAI 129
Cdd:cd17319    2 WRIIPLLFLAYVINYLDRVNISVAAPT-IMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 130 CTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEmdglgnLD 209
Cdd:cd17319   81 FTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLL------LF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 210 GWAWIFILEGLLTFVVAIIAYFVMhdypntarflttpekeevlrrlehdrssladefdmryfwdalkdWKIWVHMFITIG 289
Cdd:cd17319  155 GWRWAFIIEGLLGLLLAVLWWFYL--------------------------------------------RQVWGLALGYFG 190
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 290 IYTPLYSYALFLPTIVR-GLGYSNETAQLMTVPPYIVACVCCVTAGWYADRV--GQRGIFMIFFIAFptSILGFLLLIVS 366
Cdd:cd17319  191 INYALYGLLTWLPTYLKqARGFSLKQVGLLAAIPFLAGAIGMILGGRLSDRLlrGARRLVIIIGLLL--AAVGLLLAYLT 268
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 367 QNNQVKYAGCFFAAMGIYpnVPQGVAW-NGNNIGGSLKRGVGIAMHVGFGNLGGAIS----GFIYQSTHGpeFYPGHGTL 441
Cdd:cd17319  269 TSPVVAVILLSLAGFGIG--AASPVFWsLPADLLPGEAAATAGGLINSGGNLGGFVAplliGYLVDATGS--YTAAFLFL 344
                        410
                 ....*....|....
gi 346974059 442 LGTLTMSLVLSIFM 455
Cdd:cd17319  345 AAVALLAALLVLLL 358
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
42-465 5.83e-38

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 142.32  E-value: 5.83e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  42 KKLLRKIDWALIPFLALLYLLSFLDRTNIGNArLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIP 121
Cdd:COG2271    1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVA-APPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 122 SIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVE 201
Cdd:COG2271   80 IGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 202 mdglgnLDGWAWIFILEGLLTFVVAIIAyfvmhdypntarflttpekeevlrrlehdrssladefdmryfwdalkdwkIW 281
Cdd:COG2271  160 ------AFGWRAAFLILGLPGLLLALLR--------------------------------------------------FW 183
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 282 VHMFITIGIYTPLYSYALFLPTI-VRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFpTSILGF 360
Cdd:COG2271  184 LLALAYFLVYFALYGFLTWLPTYlVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLL-LAALAL 262
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 361 LLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLkRGVGIAMHVGFGNLGGAIS----GFIYQSThgpefyp 436
Cdd:COG2271  263 LLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKA-RGTASGLVNTFGFLGGALGpllvGYLLDAT------- 334
                        410       420
                 ....*....|....*....|....*....
gi 346974059 437 GHGTLLGTLTMSLVLSIFMHIYLRRENAR 465
Cdd:COG2271  335 GYQAAFLLLAALALLAALLALLLLRETRK 363
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
78-464 1.16e-28

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 116.90  E-value: 1.16e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  78 IEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGL 157
Cdd:COG2223   31 LAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 158 FPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMdglgnlDGWAWIFILEGLLTFVVAIIAYFVMHDYP 237
Cdd:COG2223  111 FAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAA------FGWRNAFLILGILLLVVAVLAWLFLRDPP 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 238 NTARflttpekeevlrrlEHDRSSLADefdmryFWDALKDWKIWVHMFITIGIYTPLYSYALFLPTI-VRGLGYSNETAQ 316
Cdd:COG2223  185 AGAA--------------AAAKASLRD------QLEALRDPRFWLLSLLYFGTFGSFIGFSSWLPPYlVDQFGLSAATAG 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 317 LMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAfptSILGFLLLIVSQNNQVKYAGCFFAAMGIY----PNVPQGVA 392
Cdd:COG2223  245 LLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFAL---MALGLLLLALALGSLWLFLVLFLLLGLALgggnGAVFALVP 321
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 346974059 393 wngnNIGGSLKRGVGIAMHVGFGNLGGA----ISGFIYQSTHGpeFYPGHGTLLGTLTMSLVLSIFMHIYLRRENA 464
Cdd:COG2223  322 ----DIFPTKNAGAVYGLVGAAGGLGGFlgplLFGALLDATGS--YTAAFLVFAVLALVALVLTLLLYRRPRRAAA 391
MFS_1 pfam07690
Major Facilitator Superfamily;
66-422 1.23e-23

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 101.73  E-value: 1.23e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059   66 DRTNIGNARLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLA 145
Cdd:pfam07690  11 GRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLV 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  146 ARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEmdglgnLDGWAWIFILEGLLTFVV 225
Cdd:pfam07690  91 LRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLAS------LFGWRAAFLILAILSLLA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  226 AIIAYFVMhDYPNTARFLTTPEKEEVLRRLehdrssLADEFDMRYFWdalkdwkIWVHMFITIGIYtplYSYALFLPTIV 305
Cdd:pfam07690 165 AVLLLLPR-PPPESKRPKPAEEARLSLIVA------WKALLRDPVLW-------LLLALLLFGFAF---FGLLTYLPLYQ 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  306 RGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSILGFLLLIVSQNNQVKYAGCFFAAMGIYP 385
Cdd:pfam07690 228 EVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGL 307
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 346974059  386 NVPQGVAWNGNNIGGSlKRGVGIAMHVGFGNLGGAIS 422
Cdd:pfam07690 308 VFPALNALVSDLAPKE-ERGTASGLYNTAGSLGGALG 343
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
78-434 3.69e-21

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 95.19  E-value: 3.69e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  78 IEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGL 157
Cdd:cd06174   22 LLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLI 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 158 FPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMDGLgnldGWAWIFILEGLLTFVVAIIAYFVMHDYP 237
Cdd:cd06174  102 DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGF----GWRAVFLIAAALALLAAILLLLVVPDPP 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 238 NTARFLTTPEKEEVLRRLehdrssladefdmryFWDALKDWKIWVHMFITIGIYTPLYSYALFLPT-IVRGLGYSNETAQ 316
Cdd:cd06174  178 ESARAKNEEASSKSVLKL---------------LKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLfLLDLGGLSVAVAG 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 317 LMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSILGFLLLIVSQNNQVKYAGCFFAAMGIYpNVPQGVAWNGN 396
Cdd:cd06174  243 LLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGL-LPLSFALIAEL 321
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 346974059 397 NIGGSLKRGVGIAMHVGF--GNLGGAISGFIYQSTHGPEF 434
Cdd:cd06174  322 FPPEIRGTAFGLLNTFGFlgGAIGPLLAGFLLAATFGLTG 361
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
75-422 4.05e-19

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 88.49  E-value: 4.05e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  75 LAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAARMALGVAE 154
Cdd:COG2814   33 LPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGA 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 155 GGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEmdglgnLDGWAWIFILEGLLTFVVAIIAYFVMh 234
Cdd:COG2814  113 GALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLAD------LFGWRWVFLVNAVLALLALLLLLRLL- 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 235 dyPNTARFLTTPEKEEVLRrlehdrssladefdmryfwdALKDWKIWVHMFITIGIYTPLYSYALFLPTIV-RGLGYSNE 313
Cdd:COG2814  186 --PESRPAARARLRGSLRE--------------------LLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLqEVLGLSAS 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 314 TAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAfptSILGFLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAW 393
Cdd:COG2814  244 AAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLL---LALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQAL 320
                        330       340
                 ....*....|....*....|....*....
gi 346974059 394 NGNNIGGSLkRGVGIAMHVGFGNLGGAIS 422
Cdd:COG2814  321 VAELAPPEA-RGRASGLYNSAFFLGGPLA 348
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
100-454 5.80e-15

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 76.26  E-value: 5.80e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  100 YVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMA 179
Cdd:TIGR00881  43 YGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVS 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  180 IFFSAATAAGAFGGLLArgiveMDGLGNLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARFltTPEKEEVLRRLEHDR 259
Cdd:TIGR00881 123 FWNCSHNVGGGLLPPLV-----LFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGL--PPAEEMPNEEPDGDA 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  260 SSLADEFDMR--YFWDALKDWKIWVHMFITIGIYTPLYSYALFLPT-IVRGLGYSNETAQLMTVPPYIVACVCCVTAGWY 336
Cdd:TIGR00881 196 EKKEEELTKKqiFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLyLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWL 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  337 ADR--VGQRGIFMIFFIAFPTSILGFLLLIVSQNNQVKYAgcFFAAMGIYPNVPQGVAWNgnniggslkrgvgIAMHVGF 414
Cdd:TIGR00881 276 SDKlfNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLI--CLFALGFLVYGPQMLIGV-------------IASELAP 340
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 346974059  415 GNLGGAISGFIyqsthgpEFYPGHGTLLGTLTMSLVLSIF 454
Cdd:TIGR00881 341 KKAAGTAAGFV-------GFFAYLGGILAGLPLGYLADGF 373
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
124-425 4.40e-13

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 70.32  E-value: 4.40e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMd 203
Cdd:cd17316   73 LLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPL- 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 204 gLGNLDGWAWIFILEGLLTFVVAIiayfvmhdypntarflttpekeevLRRLehdrssladefdmryfwdalkdwkIWVH 283
Cdd:cd17316  152 -LSGDWGWRILFLIGALPALLALL------------------------LRRR------------------------TLLL 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 284 MFITIGIYTPLYSYALFLPTI-VRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSILGFLL 362
Cdd:cd17316  183 ILLWFFISFGYYGLTTFLPTYlQTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFY 262
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 346974059 363 LIVSQNNQVKYAGCFFAAMGIYPNVPQGVAwnGNNIGGSLKRGVGIAMHVGFGNLGGAISGFI 425
Cdd:cd17316  263 LLSGSPTLLLLLLFILSFFVGGVWGALYAY--LAELFPTEVRATGVGLSYNLGRLGGGGAPPL 323
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
80-365 1.62e-11

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 65.68  E-value: 1.62e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  80 ADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRF--RPSIWIPsiMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGL 157
Cdd:cd17325   24 ESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFgrKRLLLLG--LLLLAVSTLLFAFATSYWQLLLARFLQGLASAAV 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 158 FPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLArGIvemdgLGNLDGWAWIFILEGLLTFVVAIIAYFVMHDyp 237
Cdd:cd17325  102 WPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLG-GL-----LADALGYRAPFLVCAALALLALVLALLLLPE-- 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 238 ntarflttpekeevlRRLEHDRSSLADEFDMRYFWDALKDWKIWVHMFITIGIYTPLYSYALFLPTIVRGL-GYSNETAQ 316
Cdd:cd17325  174 ---------------PRPPPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELgGLSPAQIG 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 346974059 317 LMTVPPYIVACVCCVTAGWYADRVGQRGIFMI---------FFIAFPTSILGFLLLIV 365
Cdd:cd17325  239 LLFGAQGLASALSQPPAGKLSDRIGRKPLILIglllsavalLLLPLATSFWLLLLLLA 296
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
68-466 3.59e-09

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 58.71  E-value: 3.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  68 TNIGNARLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRF--RPSIWIPSIMVAwaICTTLMGLVTNYGGLLA 145
Cdd:COG0738   24 TALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFgyKRGLLLGLLLMA--LGLLLFALAPSYPLLLL 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 146 ARMALGVAEGGLFPGVTYYITMWYRRREcGLRMAIFFSAATAAGAFGGLLARGIVemdGLGNLDGWAWIFILEGLLTFVV 225
Cdd:COG0738  102 ALFLLGLGLGLLDVAANPYVAALGPETA-ASRLNLLHAFFSLGALLGPLLGGLLI---LLGLSLSWHLPYLILAVLLLLL 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 226 AIIAYFVmhdypntarflTTPEKEEVLRRLEHDRSSLADEFDMRYFwdalkdWKIWVHMFITIGIYTPLYSY-ALFLpti 304
Cdd:COG0738  178 ALLFLRS-----------KLPEIEEEEEEAAGSAASLKSLLKNPRL------LLGGLAIFLYVGAEGAIGDWlPLYL--- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 305 VRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAfptSILGFLLLIVSQNNQVKYAGCFFAAMGIY 384
Cdd:COG0738  238 KDVLGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALL---AAVGLLLALLAPGPWLALIGLALVGLGLS 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 385 PNVPQGVAWNGNNIGGSLKRGVGIAMhvGFGNLGGAIS----GFIYQSThgpefypGHGTLLGTLTMSLVLSIFMHIYLR 460
Cdd:COG0738  315 LMFPTIFSLALDGLGKRTAAAVSAVL--IMGIVGGAIGppliGFLADAF-------GLRAAFLVPLVCYLLILLLALALK 385

                 ....*.
gi 346974059 461 RENARR 466
Cdd:COG0738  386 RKRRKK 391
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
123-425 4.91e-09

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 57.94  E-value: 4.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 123 IMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFP-GVTYYITMW-YRRRecGLRMAIFFSAATAAGAFGGLLARGIv 200
Cdd:cd17324   70 LLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAiAAAYAADLVpPEKR--GRAIGLVFSGLTLGLVLGRPLGGLL- 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 201 emdglGNLDGWAWIFILEGLLTFVVAIIAYFVMhdyPNTARFLTTPEKeevlrrlehdrssladefDMRYFWDALKDWKI 280
Cdd:cd17324  147 -----GQLLGWRAAFLAIAVLALLAALLLWRLL---PSLPPKKPGSLG------------------LLSSLLLLLRNPRL 200
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 281 WVHMFITIGIYTP---LYSYALFLPTIVRGLGYSNETAQLMTVppYIVACVCCVTAGWYADRVGQRGIFMIFFIAfptSI 357
Cdd:cd17324  201 RLAYLITFLLFGGffaLYTYLAPFLTDVPGFSSSAIIGLLLLF--GVAGVVGSPLAGRLADRGGRRALLIALLLL---AA 275
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 346974059 358 LGFLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSlkRGVGIAMHVGFGNLGGAISGFI 425
Cdd:cd17324  276 ALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRLAPEA--RGLASSLYLAAYNLGGALGAAL 341
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
122-424 4.69e-08

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 55.00  E-value: 4.69e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 122 SIMVAW-AICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIv 200
Cdd:cd17371   68 VITILLfAVFTLLCGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALL- 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 201 eMDGLGNLDGWAWIFILEGLLTFVVAIIAYFVmhdyPNTARFLTTPEKeevlRRLEHDRSSLADEFDMRYfwdaLKDWKI 280
Cdd:cd17371  147 -FPLLPPEIAWRVLFLLGALPALLVLFIRRFV----KEPPQWQAARAA----RRHFADRPSLRELFSPPL----LRTTLL 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 281 WVHMFITI-GIYtplYSYALFLPTIVRG-LGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSIL 358
Cdd:cd17371  214 ASLLATGAlGGY---YGITTWLPSYLTGeRGLSFEGSAGYLVVTILGGFLGYLAGGFLADRIGRRNNFALFALGSAISIL 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 359 GFLLLIVSqNNQVKYAGCF--------FAAMGIY------PNV---PQGVAWNGNNIGGSLKrGVGIAMHVGFGNLGGAI 421
Cdd:cd17371  291 LYFFLPLS-PTLILILGFPlgffasgpFSGMGAYltelfpTAVratAQGFCYNVGRIIGALF-PFLVGFLATSGSLGTAI 368

                 ...
gi 346974059 422 SGF 424
Cdd:cd17371  369 AVF 371
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
120-456 1.97e-07

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 53.02  E-value: 1.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 120 IPSIMVAWAicttlmglVTNYGGLLAARMALGVAeGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGI 199
Cdd:cd17341   76 IPLLALALA--------VSSYWGLLVLGFLLGFA-GANFASGQPWASFWFPKEKIGGAAGGIAGAGNMGVAVSQLLAPLI 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 200 VE-MDGLGNLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARflttpekeevlrrlehdrsslADEFDMRYFWDALKDW 278
Cdd:cd17341  147 AGaIVFDGGFVGWRNAFFVPGILLAIAAVLVLLFGDDLPTGKA---------------------SALEFLKVQLAVLKNY 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 279 KIWVHM---------FITIGIYTPLYSYALFlptivrglGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIF 349
Cdd:cd17341  206 RTWILSllygvtfgsFVGFSNVLPTYFKTRF--------GLPLVTAGILAALFPLAGALARPAGGWLSDRFGGRRRLWWL 277
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 350 FIAfpTSILGFLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLKRGVGIA--MHVGFGNLGGAISGFIYQ 427
Cdd:cd17341  278 FIV--MTIGAALLSLSLPTSGTNLVLFLALFVALGLGAGAGNGSVFRMVPFIFRRELGAVtgLVGAIGGLGGFFLPLLFG 355
                        330       340
                 ....*....|....*....|....*....
gi 346974059 428 STHGPEFYpGHGTLLGTLTMSLVLSIFMH 456
Cdd:cd17341  356 SSALMTGS-GVGAFSLFGVLAVACTLLVW 383
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
194-425 3.15e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 52.60  E-value: 3.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 194 LLARGIVEMDGLGNLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTarflttpekeevlrrlEHDRSSLADEfdmryFWD 273
Cdd:COG2211  165 VLPPPLVAAFGGDAALGYRLTALIFAVLGLLAFLLTFFGTKERPVP----------------EEEKVSLKES-----LKA 223
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 274 ALKDWKIWVHMFITIGIYTPLYSY-ALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIA 352
Cdd:COG2211  224 LLKNRPFLLLLLAYLLFFLALALVaALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLL 303
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 353 FptsILGFLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWN--------GNNIGGSLKRGVGIAMHVGFGNLGGAISGF 424
Cdd:COG2211  304 A---ALGLLLLFFLGPGNLWLLLVLAALAGIGLGAILVLPWAmladvvdyDEWKTGRRREGLYFGIFTFAIKLGQALAGA 380

                 .
gi 346974059 425 I 425
Cdd:COG2211  381 L 381
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
208-425 6.16e-07

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 51.76  E-value: 6.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 208 LDGWAW-I-FilegLLTFVVAIIAYFVmhdypnTARFLTTPEKEEVLRRLEHDRSSLADEFdmryfwdaLKDWK-IWVHM 284
Cdd:cd17369  173 FLSWGWrIpF----LLSAVLVAVGLYI------RLRLEETPVFRRAKEAGQVVRAPLVEVL--------RRHWRaLLLAI 234
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 285 FITIGIYTPLYSYALFLPT-IVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSILGFLLL 363
Cdd:cd17369  235 GLRLAENVLFYLFTTFALSyATQTLGVDRSTVLLAVLIASVVAAITIPLFGWLSDRVGRRPVYLAGALLAALFAFPFFWL 314
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 346974059 364 IVSQNNQVKYAGCFFAAMGIYP--NVPQGvAWNGNNIGGSLK-RGVGIAMHVGFGnLGGAISGFI 425
Cdd:cd17369  315 LDTGSTWLIVLAAVVVLGVLHGmmYGPQA-AFLAELFPTRVRyTGASLGYQLGAI-LGGGFAPLI 377
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
124-461 3.09e-06

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 49.49  E-value: 3.09e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRREcGLRMAIFFSAATAAGAFGGLLARGIVEmd 203
Cdd:COG2807   90 LLLLAAGLLLRSLAPSVALLLAGTALIGAGIAVGNVLLPGLIKRWFPDRV-GLMTGLYTAAMGLGAALAAGLTVPLAA-- 166
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 204 glgnLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTArflTTPEKEEVLRRLEhdRSSLAdefdmryfwdalkdWKIWVH 283
Cdd:COG2807  167 ----ALGWRGALAVWALLALLALLLWLPLLRRRPAAA---AAAPAAASLRSLW--RSPLA--------------WLLTLF 223
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 284 MFITIGIYtplYSYALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVG-QRGIFMIFFIAFPTSILGFLL 362
Cdd:COG2807  224 FGLQSLLY---YAVVAWLPPILRDAGLSAATAGLLLSLFQLAGIPGSLLVPLLADRLGdRRPLLLLLGLLGLAGLLGLLL 300
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 363 LIVSqnnqVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLKRGVGIAMHVGFGNLGGAI----SGFIYQSTHGPefypgH 438
Cdd:COG2807  301 APGS----LPWLWAVLLGLGQGGLFPLALTLIGLRARTPAEAAALSGMAQSVGYLLAALgpllVGALHDATGSW-----T 371
                        330       340
                 ....*....|....*....|...
gi 346974059 439 GTLLGTLTMSLVLSIFMHIYLRR 461
Cdd:COG2807  372 AALLLLAALAVLMLVAGLLAGRP 394
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
280-425 3.32e-06

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 49.20  E-value: 3.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 280 IWVHMFITIGIYTPLYSYALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFptsILG 359
Cdd:COG2814   12 LLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLF---ALG 88
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 346974059 360 FLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSlKRGVGIAMHVGFGNLGGAISGFI 425
Cdd:COG2814   89 SLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPE-RRGRALGLLGAGLGLGPALGPLL 153
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
67-237 6.05e-06

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 48.42  E-value: 6.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  67 RTNIGNArLAGIEADLGMKGLQYNVALAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAA 146
Cdd:cd17312   19 RKNFSVA-KPPIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 147 RMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVemdglgNLDGWAWIFILEGLLTFVVA 226
Cdd:cd17312   98 WGLNGLFQSMGWPPCVKLLGNWFSKKERGTVYGIWSTSHNFGGILAPILAASLA------SYYGWRAAFLVPGIVGLVVA 171
                        170
                 ....*....|.
gi 346974059 227 IIAYFVMHDYP 237
Cdd:cd17312  172 IILFFFLRDSP 182
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
124-425 6.41e-06

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 48.34  E-value: 6.41e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWY----RRRECGLRMAIffsaaTAAGAFGGLLARGi 199
Cdd:cd17473   72 LLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYFegeeRAKMLGLQSAA-----MSLGGVVFLLLGG- 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 200 vemdGLGNLdGWAWIFILEgLLTFVVAIIAYFVMhdypntarflttPEKEEVLRRLEHDRSSLADEFDMRyfwdalkdwK 279
Cdd:cd17473  146 ----ALAEI-GWRAPFLVY-LLALPVLILVLLFL------------PEPARKSKSAASPGAATAAALPWK---------R 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 280 IWVHMFITIGIYTPLYSYALFLPTIV--RGLGYSNETAQLMTVPPyIVACVCCVTAGWYADRVGQRGIFMIFFIAFptsI 357
Cdd:cd17473  199 VLPIYFLAFLAMLLFYVIPIQLPFLLqeRGGGSAALIGLALAIAS-LAGAIGALLFGRLKRRLGKRRLLAIGFALM---A 274
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 346974059 358 LGFLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSLkRGVGIAMHVGFGNLGGAISGFI 425
Cdd:cd17473  275 LGFLLLALASGLWVVLLGAILAGLGFGLLLPTLNSWAMSLVPPEL-RGRAMGIVTSAFFLGQFLSPLV 341
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
113-425 2.01e-05

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 46.78  E-value: 2.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 113 RFRPSIWIPSIMVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRREcGLRMAIFFSAATAAGAFG 192
Cdd:cd17478   57 RKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVALAGIGSAAFHPEGARLASQAAGGRR-GLAMSIFSVGGNLGFALG 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 193 GLLARGIVEMDGLGnldGWAWIFILEGLltfVVAIIAYFVMHDYPNTARFLTTPEKEEVLRRlehdrssladefdmryfw 272
Cdd:cd17478  136 PLIAAALVALFGGL---GLLILLIIPGL---AVALLLLRLRPLKKPEAKKAAAKSSARSTLK------------------ 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 273 dalKDWKIWVHMFITIGI-YTPLYSYALFLPTIVRGLGYSNETAQLM-TVppYIVAC-VCCVTAGWYADRVGQRGIFMIF 349
Cdd:cd17478  192 ---GVWRALLLLLIIVFLrSWVLSSLTTFLPFYLVQRGYSLVFAGLLlSL--FLFAGaIGTLIGGPLSDRFGRRRVIIAS 266
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 346974059 350 FIAFPTSILGFLLLivsqNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSlkRGVGIAMHVGFGNLGGAISGFI 425
Cdd:cd17478  267 LLLAAPFLLLFLLT----PGIWSYILLVLAGFLLFASFPVTVVLAQELLPGN--VGLASGLMMGLSFGLGGIGAPV 336
2A0114euk TIGR00894
Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]
140-425 3.01e-05

Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]


Pssm-ID: 129972 [Multi-domain]  Cd Length: 465  Bit Score: 46.27  E-value: 3.01e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  140 YGGLLAARMAL----GVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMDGlgnldGWAWIF 215
Cdd:TIGR00894 127 AGGGIALVVFCrviqGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-----GWPMIF 201
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  216 ILEGLLTFVVAIIAYFVMHDYPNTARFLTTPEKEEVLRRLEHDRSSLADEFDMRYFWDALKDWKIWVHMFitiGIYTPLY 295
Cdd:TIGR00894 202 YVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIF---GHFWLYT 278
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  296 SYALFLPTIVRG-LGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIF---MIFFIAFPTSILGFLLLIVSqnnqV 371
Cdd:TIGR00894 279 ILPTYLPTFISWvLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLsltAARKIFNGIGGLGPGIFAYA----L 354
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 346974059  372 KYAGCFFAAMGIYPNVpqGVAWNGNNIGGSLKRGVGIAMHV-----GFGNLGGAISGFI 425
Cdd:TIGR00894 355 PYLSAAFYLTIIILTL--ANAVSSGPLAGVLINSLDLAPRFlgfikGITGLPGFIGGLI 411
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
124-232 6.30e-05

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 44.80  E-value: 6.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEmd 203
Cdd:COG0477   86 LLLFGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVA-- 163
                         90       100
                 ....*....|....*....|....*....
gi 346974059 204 glgnLDGWAWIFILEGLLTFVVAIIAYFV 232
Cdd:COG0477  164 ----ALGWRWIFLINAPLGLLALVLRLRL 188
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
124-345 7.08e-05

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 44.92  E-value: 7.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMD 203
Cdd:cd17328   71 ILIWSAATLLSSFAPNFWQLLLFRALVGIGEASYSPIAPTIIADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQAT 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 204 GlgnldGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARflttpekEEVLRRLEHDRSSLADefdmryFWDALKDWKIWVH 283
Cdd:cd17328  151 G-----GWRWAFRVTGVLGVLLAILLLLFVREPPRGAA-------EGGVMAKSTATSFLAD------LKALAKNPSFILS 212
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 346974059 284 MFITIGIYTPLYSYALFLPT-IVRGLGYSNETAQLMTVPPYIVACVC----CVTAGWYADRVGQRGI 345
Cdd:cd17328  213 TLGFTAVSFVTGALAFWAPTfFLRAFGVGDLSSADVGLIFGAITCIAgvlgVLLGGILADRLRRKTP 279
MFS_1 pfam07690
Major Facilitator Superfamily;
284-474 8.14e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 44.72  E-value: 8.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  284 MFITIGIYTPLYSYALFLP-TIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFptsILGFLL 362
Cdd:pfam07690   2 FLAAFLAALGRSLLGPALPlLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLF---ALGLLL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  363 LIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWNGNNIGGSlKRGVGIAMHVGFGNLGGAI----SGFIYqsthgpEFYPGH 438
Cdd:pfam07690  79 LLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPE-ERGRALGLVSAGFGLGAALgpllGGLLA------SLFGWR 151
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 346974059  439 GTLLGTLTMSLVLSIFMHIYLRRENARRDREYKKPE 474
Cdd:pfam07690 152 AAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEAR 187
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
93-425 9.27e-05

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 44.53  E-value: 9.27e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  93 LAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLVTN--YGGLLAARMALGVAEGGLFPGVTYYITMWYR 170
Cdd:cd17318   62 LSSFFYGYILTQIPGGYLAEKYGAKRVLGYSILITALLTLLTPLAARggYGALIVLRILQGLAQGVTFPAMHALWAKWAP 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 171 RRECGLRMAIFFSAATAAGAFGGLLARGIVEmdglgnLDGWAWIFILEGLLTFVVAIIayfvmhdypntarflttpekee 250
Cdd:cd17318  142 PLERSRLTSIAYSGSQFGTVIAMPLSGFLCE------SLGWPSIFYIFGGLGLLWCLL---------------------- 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 251 vlrrlehdrssladefdmrYFWDALKDWKIWV-HMFITIGIYTPLysyaLFLPTIVRG-LGYSNETAQLMTVPPYIVACV 328
Cdd:cd17318  194 -------------------WFFLVLPVWAIVVaHFGHNWGFYTLL----TELPTYMSDvLHFNIKSNGFLSSLPYLAMWI 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 329 CCVTAGWYADRVGQRGIFMI-----FFIAFPTSILGFLLLIVSQNNQVKYA--GCFFAAMGIypnvpQGVAWNGNNIGG- 400
Cdd:cd17318  251 CSIVGGYLADWLRSRGILSTttvrkLFTSIGFLGPGVFLIALGYLGSNATLavVFLTLSVGL-----SGACYSGFLVNHl 325
                        330       340
                 ....*....|....*....|....*.
gi 346974059 401 SLK-RGVGIAMhvGFGNLGGAISGFI 425
Cdd:cd17318  326 DLApNYAGTLM--GITNTAATIAGII 349
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
93-425 9.48e-05

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 44.47  E-value: 9.48e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  93 LAVFFPFYVAAEIPSNMAMKRFRPSIWIPSIMVAWAICTTLMGLV--TNYGGLLAARMALGVAEGGLFPGVTYYITMWYR 170
Cdd:cd17380   40 LSSFFWGYALTQVLGGYLADRFGGKKVLLLAVALWSLATLLTPLLaySSLPLLILSRILLGLGEGVHFPSMTSLFSRWVP 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 171 RRECGLRMAIFFSAATAAGAFGGLLARGIVEMdglgnlDGWAWIFILEGLLTFVVAIIAYFVMhdypntarflttpekee 250
Cdd:cd17380  120 VSERSRAVSIVTAGSYLGTLLGGLIGPLLLEY------YGWPSVFYFFGLLGLLWALVWLIYL----------------- 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 251 vlrrlehdrssladefdmryfwdalkdWKIWVhmfITIGIYTplYSYALF-----LPTIVRGLGYSNETAQLMTVPPYIV 325
Cdd:cd17380  177 ---------------------------PPVWA---IIVAHFC--MNWGFYillswLPTYFHEVLVPLAKGWVFNVVPWLV 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 326 ACVCCVTAGWYADRVGQRGIFMIF------FIAFPTSILgFLLLIVSQNNQVKYAGCFFAAM--------GIYPNvPQGV 391
Cdd:cd17380  225 MFPSSNVAGWLADHLISRGWTVTSvrklmqSIGFLGPAL-FLLLLSHTDSFSLALLCMSVALglsafsssGVLVN-HQDI 302
                        330       340       350
                 ....*....|....*....|....*....|....
gi 346974059 392 AwngnniggslKRGVGIAMhvGFGNLGGAISGFI 425
Cdd:cd17380  303 A----------PNYAGIVF--GISNTAGTIPGIV 324
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
124-422 1.16e-04

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 44.27  E-value: 1.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLArgivemD 203
Cdd:TIGR00895  89 ILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA------G 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  204 GLGNLDGWAWIFILEGLLTfvvAIIAYFVMHDYPNTARFLTTPEKEEVLRRLEHDRSSL------------ADEFDMRYF 271
Cdd:TIGR00895 163 WLIPVFGWRSLFYVGGIAP---LLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMqaeaqsalpeqkSTQGTKRSV 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  272 WDALKDWK-------IWVHMFITIGIYtplYSYALFLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGqRG 344
Cdd:TIGR00895 240 FKALFQGKtaritvlLWLLYFMLLVGV---YFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLG-PR 315
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059  345 IFMIFFIAfpTSIlgFLLLIVSQNNQVKYAGCFFAAMGIYPNVPQGVAWN------GNNIggslkRGVGIAMHVGFGNLG 418
Cdd:TIGR00895 316 VTALLLLL--GAV--FAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYAlmalfyPTAI-----RATGVGWAIGIGRLG 386

                  ....
gi 346974059  419 GAIS 422
Cdd:TIGR00895 387 AIIG 390
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
143-456 1.80e-04

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 43.82  E-value: 1.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 143 LLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEMDGLGNLDGWAW--IFILEGL 220
Cdd:cd17367  104 LLLARLLQGLSVGGEYGTSATYLSEVAPPGRRGFYSSFQYVTLIGGQLLALGVLLVLQHTLGEDQMAAWGWriPFLLGGV 183
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 221 LTFVVAIIAYfVMHDYPNTARFLTTPEKEEVLRR--LEHDRSSLAdefdmryfwdalkdwkiwvHMFITIGIYTPLYSYA 298
Cdd:cd17367  184 LAVVVLWLRR-GLEETESFEAIAESNEASAGTLRelRRHPRELLL-------------------VVGLTAGGTLAFYTWT 243
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 299 LFLPT-IVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAFPTSILGFLLLIVSQNNQ------V 371
Cdd:cd17367  244 TYLQKfLVNTAGFSKGDATWITTAALLVFMLLQPLGGRLSDRIGRRPLLLFFGIGGTLATVPLLSALDHTDSPytafalV 323
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 372 KYAGCFFAA-MGIYPNV-----PQGVawngnniggslkRGVGIAMHVGFGN--LGGAISgFIYQ---STHGPEFYPGHGT 440
Cdd:cd17367  324 LVGLVFLSGyTSINAVVkaelfPTHV------------RALGVGLPYALAVaiFGGTAP-YVALwlkSIGHEWVFFWYVA 390
                        330
                 ....*....|....*.
gi 346974059 441 LLgtLTMSLVLSIFMH 456
Cdd:cd17367  391 GL--IAISLVVYLRMP 404
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
205-393 3.94e-04

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 42.63  E-value: 3.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 205 LGNLDGWAWIFILEGLLtfvvAIIAYFVMHDYPNTARFLTTPEKEE--------VLRRLEHDRSSLADEFDMRY------ 270
Cdd:cd17357  166 LGTETLWPYLLFFPGIP----ALLQLAALPFFPESPKFLLISKGDEeeaekslkFLRGIEDDVDQELEEIKKESeqmgdq 241
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 271 ----FWDALKDWKIWVHMFITIGI--------YTPLYSYALFlptIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYAD 338
Cdd:cd17357  242 kqvsLMQLLRDPSLRLPLLLVLVVsasqqfsgINAIFFYSTF---IFENAGFSPQLAEWANLGIGIVNVLSTIVGPFLIE 318
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 346974059 339 RVGQRGIFMI--FFIAFPTSILGFLLLIVSQNNQVKY--AGCFFAAMGIYPNVPQGVAW 393
Cdd:cd17357  319 KVGRRPLLLIslSVCAVALLLMSVFLFLSEQNSWMSYgcIVAIFLFIFFFAIGLGPIPW 377
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
280-423 8.46e-04

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 41.42  E-value: 8.46e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 280 IWVHMFITIGIYTPLYSYalfLPTIVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRVGQRGIFMIFFIAfptSILG 359
Cdd:cd17365  176 LWVTFFMGLLLVYLLNSW---LPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGWLADRFGPKRVLALFFAL---GAVS 249
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 346974059 360 FLLLIVSQNNQVKYAGCFFAAmgiypnvpqGVAWNGNNIG---------GSLKRGVGIAMHVGFGNLgGAISG 423
Cdd:cd17365  250 LALLGVSPASLVLLYVLVFLA---------GACVNGAQVGlyalaarfyPTEVRATGVGWALGVGRL-GAILG 312
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
124-395 1.08e-03

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 41.45  E-value: 1.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 124 MVAWAICTTLMGLVTNYGGLLAARMALGVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAFGGLLARGIVEmd 203
Cdd:cd17475   68 LLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSVQPGGGRAIMRWFPPRERGLAMGIRQTGVPLGGALAAALLPPLAL-- 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 204 glgnLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTARfltTPEKEEVLRRLehdRSSLadefdmryfwdaLKDWKIWVH 283
Cdd:cd17475  146 ----HYGWRAAFVVAGLVSILAAVLFWLFYREPPAASA---ATESASTLLRS---LKEV------------LRNRDVWLI 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 284 MFITIGIYTPLYSYALFLPTIVR-GLGYSNETAQLMTVPPYIVACVCCVTAGWYADRV--GQRGIFMIFFIAFPT-SILG 359
Cdd:cd17475  204 AIAGALLVAPQFALLTFLLLFLHdHLGLSVVAAGALLAVAQLGGALGRIGLGRVSDRVfgGRRRPVLVITAAIAAaALLV 283
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 346974059 360 FLLLIVSQNNQVKYAGCFFAAMGiypnvpqGVAWNG 395
Cdd:cd17475  284 LSLLSPGTPLWLLVLLLILLGLF-------AIGWNG 312
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
116-353 2.34e-03

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 40.30  E-value: 2.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 116 PSIWIPSIMVAWAICTTLMGLVTNYG---GLLAARMAL-GVAEGGLFPGVTYYITMWYRRRECGLRMAIFFSAATAAGAF 191
Cdd:cd17345   67 PKRFLAIGLILSAIINILIGFVPSATssvGLMFILLFLnGWFQGMGWPPSGRTMVHWFSKKERGTWTSIWNISHNVGGGL 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 192 GGLLArgiVEMDGLGNLDGWAWIFILEGLLTFVVAIIAYFVMHDYPNTarfLTTPEKEEVLRRLEHDRSSLADEFDMRYf 271
Cdd:cd17345  147 VGPLA---GLGLAIFGDGWWRGAFIFPAIIAIIVAVIVLFLGKDTPES---EGLPPIEEYKGDYPEEADGEEEEQELSA- 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 346974059 272 WD-----ALKDWKIWVHMFITIGIYTPLYSYALFLPT-IVRGLGYSNETAQLMTVPPYIVACVCCVTAGWYADRV--GQR 343
Cdd:cd17345  220 WEifvkyVLKNKLLWYIAIANVFVYLVRYGILDWAPTyLSEVKGFSKAQAMWAFSLFEWAAIPGTLLAGWLSDKLfkGRR 299
                        250
                 ....*....|....
gi 346974059 344 G----IFMIFFIAF 353
Cdd:cd17345  300 AptgiIFMILVIVA 313
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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