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photosystem II protein VI (chloroplast) [Amborella trichopoda]
cytochrome b559 subunit beta( domain architecture ID 10000037)
cytochrome b559 subunit beta is tightly associated with the reaction center of photosystem II (PSII), which is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
psbF | CHL00039 | photosystem II protein VI |
1-39 | 7.97e-19 | ||
photosystem II protein VI : Pssm-ID: 176980 Cd Length: 39 Bit Score: 69.77 E-value: 7.97e-19
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Name | Accession | Description | Interval | E-value | ||
psbF | CHL00039 | photosystem II protein VI |
1-39 | 7.97e-19 | ||
photosystem II protein VI Pssm-ID: 176980 Cd Length: 39 Bit Score: 69.77 E-value: 7.97e-19
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PsbF | COG5721 | Photosystem II cytochrome b559 beta chain, PsbF [Energy production and conversion]; ... |
5-39 | 7.38e-17 | ||
Photosystem II cytochrome b559 beta chain, PsbF [Energy production and conversion]; Photosystem II cytochrome b559 beta chain, PsbF is part of the Pathway/BioSystem: Photosystem II Pssm-ID: 444431 Cd Length: 45 Bit Score: 65.18 E-value: 7.38e-17
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cyt_b559_beta | TIGR01333 | cytochrome b559, beta subunit; This model describes the beta subunit of cytochrome b559, about ... |
6-39 | 4.84e-14 | ||
cytochrome b559, beta subunit; This model describes the beta subunit of cytochrome b559, about 40 residues in length. It is homologous to the N-terminal half of the alpha subunit, a protein of about 83 residues. Cytochrome b559 is associated with photosystem II. [Energy metabolism, Photosynthesis] Pssm-ID: 130400 Cd Length: 43 Bit Score: 58.09 E-value: 4.84e-14
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Cytochrom_B559 | pfam00283 | Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits; |
1-29 | 4.56e-09 | ||
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits; Pssm-ID: 425580 Cd Length: 29 Bit Score: 45.09 E-value: 4.56e-09
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Name | Accession | Description | Interval | E-value | ||
psbF | CHL00039 | photosystem II protein VI |
1-39 | 7.97e-19 | ||
photosystem II protein VI Pssm-ID: 176980 Cd Length: 39 Bit Score: 69.77 E-value: 7.97e-19
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psbF | PRK02561 | cytochrome b559 subunit beta; Provisional |
5-39 | 1.33e-18 | ||
cytochrome b559 subunit beta; Provisional Pssm-ID: 235051 Cd Length: 44 Bit Score: 69.29 E-value: 1.33e-18
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PsbF | COG5721 | Photosystem II cytochrome b559 beta chain, PsbF [Energy production and conversion]; ... |
5-39 | 7.38e-17 | ||
Photosystem II cytochrome b559 beta chain, PsbF [Energy production and conversion]; Photosystem II cytochrome b559 beta chain, PsbF is part of the Pathway/BioSystem: Photosystem II Pssm-ID: 444431 Cd Length: 45 Bit Score: 65.18 E-value: 7.38e-17
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cyt_b559_beta | TIGR01333 | cytochrome b559, beta subunit; This model describes the beta subunit of cytochrome b559, about ... |
6-39 | 4.84e-14 | ||
cytochrome b559, beta subunit; This model describes the beta subunit of cytochrome b559, about 40 residues in length. It is homologous to the N-terminal half of the alpha subunit, a protein of about 83 residues. Cytochrome b559 is associated with photosystem II. [Energy metabolism, Photosynthesis] Pssm-ID: 130400 Cd Length: 43 Bit Score: 58.09 E-value: 4.84e-14
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Cytochrom_B559 | pfam00283 | Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits; |
1-29 | 4.56e-09 | ||
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits; Pssm-ID: 425580 Cd Length: 29 Bit Score: 45.09 E-value: 4.56e-09
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Blast search parameters | ||||
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