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Conserved domains on  [gi|344190029|gb|AEM97837|]
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NADH dehydrogenase 5, partial (mitochondrion) [Stenobothrus stigmaticus]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475935)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-213 1.43e-72

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 230.03  E-value: 1.43e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00165 309 FLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLT 388

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00165 389 VSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWL 468

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 344190029 161 GYCFSNVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY**KS 213
Cdd:MTH00165 469 GYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKS 521
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-213 1.43e-72

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 230.03  E-value: 1.43e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00165 309 FLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLT 388

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00165 389 VSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWL 468

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 344190029 161 GYCFSNVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY**KS 213
Cdd:MTH00165 469 GYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKS 521
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 83-213 5.06e-26

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 98.78  E-value: 5.06e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   83 YSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYLGY 162
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 344190029  163 CFSNVNFSNdLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY**KS 213
Cdd:pfam06455  81 ELSNLSNKQ-LKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ 130
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-162 1.06e-18

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 83.66  E-value: 1.06e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE-MVCLSWINCLIFFFYFVSTGL 79
Cdd:COG1009  341 FLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFL 419

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  80 TASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWL---------IFPIPYTIVLPYYLKLLT 150
Cdd:COG1009  420 TAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALP 499

                        170
                 ....*....|..
gi 344190029 151 MLTVALGSYLGY 162
Cdd:COG1009  500 LLLSLLGIALGY 511
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-213 1.43e-72

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 230.03  E-value: 1.43e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00165 309 FLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLT 388

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00165 389 VSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWL 468

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 344190029 161 GYCFSNVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY**KS 213
Cdd:MTH00165 469 GYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKS 521
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 1-205 3.72e-42

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 149.41  E-value: 3.72e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00209 305 FICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLT 384

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00209 385 AAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLL 464

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 344190029 161 GYCFSNVNFsndlFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLK 205
Cdd:MTH00209 465 MYMVLKKNF----FLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMK 505
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 1-213 5.37e-39

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 141.06  E-value: 5.37e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00207 309 FVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALT 388

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00207 389 AAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALL 468

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 344190029 161 GYCFSNVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY**KS 213
Cdd:MTH00207 469 AWLFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKL 521
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 1-207 3.54e-37

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 135.74  E-value: 3.54e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00151 306 FLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLT 385

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00151 386 ALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFL 465

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 344190029 161 GYcfsnVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMG 207
Cdd:MTH00151 466 SF----GFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLS 508
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 1-202 9.02e-30

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 115.45  E-value: 9.02e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00208 366 FLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLT 445

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPyTIVLPYYLKLLTMLTVALGSYL 160
Cdd:MTH00208 446 AVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAF 524

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 344190029 161 GYCFSNvNFSNDLFSFNVLSFVSFSgsmWF*PYLSTGFVSYL 202
Cdd:MTH00208 525 SFSFLL-SLSSNPINSNFFSFLSNQ---WFFVNISHSIIISF 562
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 1-179 9.22e-30

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 115.26  E-value: 9.22e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00004 339 FLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFT 418

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPI-PYTIVLPYYLKLLTMLTVALGSY 159
Cdd:MTH00004 419 AAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGIL 498

                        170       180       190
                 ....*....|....*....|....*....|...
gi 344190029 160 LGYCFSNV-------------NFSNDLFSFNVL 179
Cdd:MTH00004 499 LALELSNMtttltppkqntlhNFSNQLAFFNPL 531
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 1-207 2.82e-29

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 113.89  E-value: 2.82e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00211 334 FMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLT 413

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIV-LPYYLKLLTMLTVALGSY 159
Cdd:MTH00211 414 AAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLL 493

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 344190029 160 LGycfsnVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMG 207
Cdd:MTH00211 494 LG-----LELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWG 536
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 1-207 2.72e-27

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 108.40  E-value: 2.72e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00108 340 FMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLT 419

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFP--IPyTIVLPYYLKLLTMLTVALGS 158
Cdd:MTH00108 420 AAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIP-QMTMPLYLKLTALAVTILGF 498

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 344190029 159 YLGYCFSnvNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMG 207
Cdd:MTH00108 499 ILALELN--LLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMS 545
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 1-181 3.34e-26

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 105.38  E-value: 3.34e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00066 337 FLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFT 416

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPI-PYTIVLPYYLKLLTMLTVALGSY 159
Cdd:MTH00066 417 AVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLL 496

                        170       180
                 ....*....|....*....|....*..
gi 344190029 160 LGYCFSNV----NFSNDLFSF-NVLSF 181
Cdd:MTH00066 497 IALDLAKItsktTPKTKMHSFsNLLAF 523
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 83-213 5.06e-26

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 98.78  E-value: 5.06e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   83 YSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGSYLGY 162
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 344190029  163 CFSNVNFSNdLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY**KS 213
Cdd:pfam06455  81 ELSNLSNKQ-LKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ 130
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 1-92 8.08e-23

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 95.67  E-value: 8.08e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00137 345 FLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFT 424

                         90
                 ....*....|...
gi 344190029  81 ASYSFRL-FYYSM 92
Cdd:MTH00137 425 AVYSLRVvFFVSM 437
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 1-209 5.29e-21

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 90.45  E-value: 5.29e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00210 341 FLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLT 420

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYYSMSGDNNFYSS--FSFDDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTIVLPYYLKLLTMLTVALGS 158
Cdd:MTH00210 421 AFYSIRLIYLTFITNTNSKKEvfIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGA 500

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 344190029 159 YLGYCFSNVN------FSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY 209
Cdd:MTH00210 501 LLAFVIYNSMvflikiSRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHL 557
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 1-208 1.40e-20

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 88.98  E-value: 1.40e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSwiNCLIFFFYFVSTG-- 78
Cdd:MTH00020 340 FLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQ--YYLIFAYWLGCFSal 417

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  79 LTASYSFRLFYYS-MSGDNNFYSSFSF-DDKSYYISFGMLSLLFVAVFGGSLLSWLIFPIPYTI--VLPYYLKLLTMLTV 154
Cdd:MTH00020 418 LTAFYSIRLIYLTfLSNTNLKKAVFFHlHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQITLppIVPLSIKLLPVFLS 497

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 344190029 155 ALGSYLGYCFSN--VNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGY 208
Cdd:MTH00020 498 LGGIGLVIILYFysSKTFRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGH 553
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
 1-88 3.61e-19

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 84.82  E-value: 3.61e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEmVCLSWINCLIFFFYFVSTGLT 80
Cdd:PRK06590 347 FLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLT 425


                 ....*...
gi 344190029  81 ASYSFRLF 88
Cdd:PRK06590 426 AFYSFRLI 433
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-162 1.06e-18

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 83.66  E-value: 1.06e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE-MVCLSWINCLIFFFYFVSTGL 79
Cdd:COG1009  341 FLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFL 419

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  80 TASYSFRLFYYSMSGDNNFYSSFSFDDKSYYISFGMLSLLFVAVFGGSLLSWL---------IFPIPYTIVLPYYLKLLT 150
Cdd:COG1009  420 TAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALP 499

                        170
                 ....*....|..
gi 344190029 151 MLTVALGSYLGY 162
Cdd:COG1009  500 LLLSLLGIALGY 511
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
1-95 5.23e-16

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 75.83  E-value: 5.23e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKD--------SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSwiNCLIFFF 72
Cdd:PRK07376 357 FLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFV 434

                         90       100
                 ....*....|....*....|...
gi 344190029  73 YFVSTGLTASYSFRLFYYSMSGD 95
Cdd:PRK07376 435 GFLTAGMTAFYMFRMYFLTFEGE 457
ndhF CHL00025
NADH dehydrogenase subunit 5
 1-113 7.69e-11

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 60.68  E-value: 7.69e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNL--------KDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMvclSWINCLIF-F 71
Cdd:CHL00025 357 FLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND---SWLYSPIFaI 433

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 344190029  72 FYFVSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDKS---YYISF 113
Cdd:CHL00025 434 IAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNssfYSISL 478
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 1-76 7.08e-10

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 57.32  E-value: 7.08e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344190029    1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVS 76
Cdd:pfam00361 216 FLCAGSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 1-59 2.20e-09

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 56.51  E-value: 2.20e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLK-DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEM 59
Cdd:MTH00032 356 FLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 1-90 6.35e-07

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 48.99  E-value: 6.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVcLSWINCLIFFFYFVSTGLT 80
Cdd:COG0651  341 FLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLT 418

                         90
                 ....*....|
gi 344190029  81 ASYSFRLFYY 90
Cdd:COG0651  419 LAYFVRIFGR 428
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-89 1.14e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 45.35  E-value: 1.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFyFVSTGLT 80
Cdd:PRK12667 364 FLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAIS 441


                 ....*....
gi 344190029  81 ASYSFRLFY 89
Cdd:PRK12667 442 LVGYFRAWY 450
PRK12650 PRK12650
DUF4040 family protein;
1-58 2.07e-04

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 41.57  E-value: 2.07e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 344190029   1 FM*AGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE 58
Cdd:PRK12650 341 FMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLT 397
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
 1-209 4.67e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 40.29  E-value: 4.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTGLT 80
Cdd:MTH00095 293 FMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLT 372

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029  81 ASYSFRLFYysmsgdnNFYSSFSFDDKSYYISFGMLSLLFVAVFGG-SLLSWLIFPIPYTIVLPYYLKLLTMLTVALgsy 159
Cdd:MTH00095 373 FGYSYRLWK-------SFFLSFSKVVNVYSSSVLMNFLSLMLVFFSvFFLWWLNFNLLNLPSLFLYLDFYVPLFYLF--- 442

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 344190029 160 LGYCFSNVNFSNDLFSFNVLSFVSFSGSMWF*PYLSTGFVSYLPLKMGYY 209
Cdd:MTH00095 443 MIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYK 492
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
 1-52 6.65e-04

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 39.89  E-value: 6.65e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 344190029   1 FM*AGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYS 52
Cdd:PRK07390 350 FMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
 1-58 1.40e-03

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 38.94  E-value: 1.40e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 344190029   1 FM*AGSMIHNLKDsQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE 58
Cdd:PRK08667 350 FLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-89 2.78e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 38.15  E-value: 2.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLswINCLIFFFYFVSTGLT 80
Cdd:PRK08376 368 FLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLT 444


                 ....*....
gi 344190029  81 ASYSFRLFY 89
Cdd:PRK08376 445 LASFVKVFH 453
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-89 3.19e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 37.87  E-value: 3.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSmIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLS---WINCLIFFFYFVST 77
Cdd:PRK06589 349 FYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASS 427

                         90
                 ....*....|..
gi 344190029  78 GLTASYSFRLFY 89
Cdd:PRK06589 428 ILSALYLLKILS 439
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
 1-58 4.34e-03

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 37.59  E-value: 4.34e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 344190029   1 FM*AGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE 58
Cdd:PRK12647 328 FMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
PRK12646 PRK12646
DUF4040 family protein;
1-58 4.38e-03

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 37.81  E-value: 4.38e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 344190029   1 FM*AGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE 58
Cdd:PRK12646 357 FMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-58 6.02e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 37.24  E-value: 6.02e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 344190029   1 FM*AGSMIHnLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILE 58
Cdd:PRK07691 344 FLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
 1-86 7.98e-03

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 36.71  E-value: 7.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDL----ILEMVCLSWINCLIFFFYFVS 76
Cdd:PRK12648 340 FMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLA 418

                         90
                 ....*....|
gi 344190029  77 TGLTASYSFR 86
Cdd:PRK12648 419 GAFSVAYSLR 428
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-90 8.72e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 36.40  E-value: 8.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344190029   1 FM*AGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGIPFLAGFYSKDLILEMVCLSWINCLIFFFYFVSTgLT 80
Cdd:PRK08375 340 FLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSL-LA 417

                         90
                 ....*....|
gi 344190029  81 ASYSFRLFYY 90
Cdd:PRK08375 418 LLYFLRIWYR 427
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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