|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
3.38e-171 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 487.74 E-value: 3.38e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFINNMYWMVQVMLFFVSFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVN 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 81 KYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFY 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 161 VMNKIGSMNFYLMNNFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQL 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 241 MNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANV 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 321 SYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 344031602 401 FSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSDACMLM 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
33-446 |
6.44e-127 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 373.79 E-value: 6.44e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 33 FIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMF 112
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 113 YLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLM---NNFMFNYDLLYFCLLL 189
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLIsslRKLLSSMGLWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 190 AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTD 269
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 270 LKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFL 349
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 350 LSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHW 429
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....*..
gi 344031602 430 LPLNLLILKSDACMLML 446
Cdd:MTH00150 401 VPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-443 |
2.38e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 363.53 E-value: 2.38e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 2 LKIIFFLLFLLPVCFINNMYWMVQVMLFFVSFIFLMMN--NFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFfsNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 80 NKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 160 YVMNKIGSMNFYLMNNFMFNYDLLY---FCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFlywIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 237 FLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 317 LANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 344031602 397 YLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSDACM 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
6.67e-121 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 359.82 E-value: 6.67e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFINNMYWMVQ---VMLFFVSFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALtfsTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 78 SVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 158 IFYVMNKIGSMNFYLMN---NFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSmepPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 235 ISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 315 FCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 344031602 395 TLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSD 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
2.28e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 351.04 E-value: 2.28e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFINNMYWMVQVMLFFVSFIFLM----MNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLAS 76
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLslqwLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 77 ESVNKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPM 154
Cdd:MTH00124 81 QNHLQHEplQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 155 LIGIFYVMNKIGSMNFYLM---NNFMFNY---DLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLqltHPTLTNSwtnLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 229 YGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHG 308
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 309 LCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLS 388
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410
....*....|....*....
gi 344031602 389 FFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTL 419
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.19e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 336.50 E-value: 1.19e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFINNMYWMVQVML---FFVSFIFLMM-NNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLAS 76
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTtnsLIIAFLSLMWfNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 77 ESVNKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPM 154
Cdd:MTH00068 81 QNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 155 LIGIFYVMNKIGSMNFYL------MNNFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:MTH00068 161 LIALLILQNSLGSLSLILlelmspMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 229 YGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHG 308
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 309 LCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLS 388
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 344031602 389 FFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILK 438
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-444 |
1.74e-111 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 335.79 E-value: 1.74e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFI--NNMYW---MVQVMLFFVSFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIvpKNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 76 SESVNKYNNYKN--LFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLP 153
Cdd:MTH00044 81 SINHLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 154 MLIGIFYVMNKIGSMNFYLMN------NFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLG 227
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 228 GYGLLRVISFLQLMNLKY-SFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIA 306
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 307 HGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSL 386
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 344031602 387 LSFFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSDACML 444
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
6.20e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 329.55 E-value: 6.20e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFI--NNMYWM-VQVMLFFVSFI-FLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLAS 76
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLskNNMIWInTTTYSLLISLIsLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 77 ES--VNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPM 154
Cdd:MTH00110 81 QHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 155 LIGIFYVMNKIGSMNFYLMN------NFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 229 YGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHG 308
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 309 LCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLS 388
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410
....*....|....*....
gi 344031602 389 FFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00110 401 LITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-438 |
8.69e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 315.73 E-value: 8.69e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 3 KIIFFLLFLLPVCFINNMYWMVQVMLFFVSFI-----FLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASE 77
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIallflLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 78 SVNKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPML 155
Cdd:MTH00206 81 NHMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 156 IGIFYVMNKIGSMNFYLM---NNFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLL 232
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 233 RVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 313 GLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 344031602 393 AYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILK 438
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILN 446
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
3.92e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 288.78 E-value: 3.92e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFINNMYWMVQVMLFFVSFIFLMMNNFMNY-----WSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNlsetgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 76 SES--VNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLP 153
Cdd:MTH00127 81 SQNhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 154 MLIGIFYVMNKIGSMNFYLMNNF------MFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSqplqlsSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 228 GYGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 308 GLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420
....*....|....*....|
gi 344031602 388 SFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPL 420
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
2.52e-66 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 219.95 E-value: 2.52e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKYNNykNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRP--KLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIF--YVMNKIGSMNFYLMNNFMFNYD---LLYFCLLLAFLVKMPMFLVHL 202
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILalYFLAGALTFDIAELAAAPLPLTaqlLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAH 281
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 282 MGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTL 361
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350
....*....|....*....|....*....|....*...
gi 344031602 362 NLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
2.45e-64 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 209.09 E-value: 2.45e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 106 SMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYD---- 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 182 --LLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFVWISISLVGGVL 259
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLA-NVSYERLGSRSLLINKGLLN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 344031602 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
5.60e-62 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 208.90 E-value: 5.60e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKynNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK--KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIFYV----MNKIGSMNFYLMNNFMFNYD---LLYFCLLLAFLVKMPMFLV 200
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGvqyWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 201 HLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSV 279
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 280 AHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 344031602 360 TLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
3.47e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 203.76 E-value: 3.47e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 104 FSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYDLL 183
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 184 YFCLL---LAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-SFLQLMNLKYSFVWISISLVGGVL 259
Cdd:MTH00204 209 KWLLVgffLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNF 339
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 340 MPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
3.37e-57 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 195.93 E-value: 3.37e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASEsvNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 128 LGWGyQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIG-SMNFYLMNNFMFNYD---LLYFCLLLAFLVKMPMFLVHLW 203
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFGvqtWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 204 LPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIsfLQLM---NLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVA 280
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFN--LPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 281 HMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 344031602 361 LNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
4.35e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 195.66 E-value: 4.35e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 104 FSSMSLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYDL 182
Cdd:MTH00217 126 FTILDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 183 LYFCLLLAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFVWISISLVGGV 258
Cdd:MTH00217 205 QYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVI 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 344031602 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:MTH00217 365 TMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
104-398 |
2.35e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 172.80 E-value: 2.35e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 104 FSSMSLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLM--NNFMFNY 180
Cdd:MTH00226 148 FSVLDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLasCSHVVSE 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 181 DL---LYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-SFLQLMNLKYSFVWISISLVG 256
Cdd:MTH00226 227 QTqkwIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGAQNLAPAVIAMGIVG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 257 GVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:MTH00226 307 IVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGL 386
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 344031602 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYL 398
Cdd:MTH00226 387 SITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-417 |
2.52e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 159.69 E-value: 2.52e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 19 NMYWMVQVMLFFVSFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLasesvnkyNNYKNLFLLNIVILLL 98
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLL--------SEKNFNLLILSNLLIL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 99 LLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMF 178
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEM 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 179 nydllYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFlqlMNLKYSFVWISISLVGGV 258
Cdd:MTH00094 154 -----FFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS---LNFVYNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344031602 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLYLYSFSQHGKLFSGVYSFSGG 417
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVG 384
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-375 |
1.36e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 148.64 E-value: 1.36e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNkynNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYD-----LLYFCLLLAFLVKMPMFLVHL 202
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPlalelLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAH 281
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 282 MGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPaMTLWWFLLSS-ANMAAPPT 360
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSmASLALPGM 365
|
330
....*....|....*
gi 344031602 361 LNLLGEVSLLNSIVS 375
Cdd:PRK12561 366 SGFVSELTVFLGITS 380
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-403 |
2.51e-37 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 141.05 E-value: 2.51e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 55 DMLSYGLVLLSLWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYqP 134
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-K 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 135 ERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYD-----LLYFCLLLAFLVKMPMFLVHLWLPKAHV 209
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDpglllAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 210 EAPVSGSMILAGIMLKLGGYGLLRVIS--FLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLS 287
Cdd:COG0651 234 AAPSPVSALLSGLLTKVGVYAILRVLTllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 288 GLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEV 367
Cdd:COG0651 314 GLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKW 393
|
330 340 350
....*....|....*....|....*....|....*..
gi 344031602 368 SLLNSIV-SWSWISMIMLSLLSFFSAAYTLYLYSFSQ 403
Cdd:COG0651 394 LLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-358 |
7.16e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 132.76 E-value: 7.16e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 52 LGCDMLSYGLVLLSLWICSLMLLASESVNKYNNyknLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNSR---LFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 132 YQpERLQAGVYLLFYTLLVSLPMLIGIFyvmnkigSMNFYLMNNFMFNYD-------------LLYFCLLLAFLVKMPMF 198
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLYGSNEPTLNFEtlanqsypvaleiLFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 199 LVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvISFLQLMNLKYSFV-WISIslVGGVLV---SLVCLRQTDLKSLI 274
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR-INMELLPHAHSIFSpWLVI--VGAIQIiyaASTSLGQRNLKKRI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 275 AYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSAN 354
Cdd:CHL00011 306 AYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMAS 385
|
....
gi 344031602 355 MAAP 358
Cdd:CHL00011 386 LALP 389
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-368 |
9.20e-33 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 129.43 E-value: 9.20e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 48 ISYFLGCDMLSYGLVLLSLWICSLMLLAS-ESVNKYNNYknlfLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFL 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSdESIQRPRFY----YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 127 ILGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYD-----LLYFCLLLAFLVKMPMFLVH 201
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPlstqlLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 202 LWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVC-LRQTDLKSLIAYSSVA 280
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 281 HMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGI 385
|
....*...
gi 344031602 361 LNLLGEVS 368
Cdd:PRK06473 386 PGMVGFIA 393
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-358 |
1.07e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 126.74 E-value: 1.07e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 52 LGCDMLSYGLVLLSLWICSLMLLASESVNkynnYK-NLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGW 130
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVT----FKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 131 GYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMN----NFMFNYDLL-YFCLLLAFLVKMPMFLVHLWLP 205
Cdd:PRK02546 159 GGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGLGFQLLcYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 206 KAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGI 284
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344031602 285 VLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAP 358
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-368 |
1.15e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 112.11 E-value: 1.15e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 48 ISYFLGCDMLSYGLVLLSlwiCSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMN----NFMFNYDLLYFC-LLLAFLVKMPMFLVHL 202
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAistqNLSLNTQLILLTgLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVisFLQLMNLKYSFVWISISLVGGVLV---SLVCLRQTDLKSLIAYSSV 279
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRF--GLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 280 AHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK07363 305 GHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAG 384
|
....*....
gi 344031602 360 TLNLLGEVS 368
Cdd:PRK07363 385 IPGLVGFVA 393
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-398 |
2.39e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.18 E-value: 2.39e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 109 LFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLM-NNFMFNYDL---LY 184
Cdd:PRK08375 128 LFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLaGALAENPTVvtaFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 185 FCLLlAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI------SFLQLMNLKYSFVWI-SISLVGG 257
Cdd:PRK08375 207 FVLL-ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLaLLSMLVG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 258 VLVSLVclrQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLL 337
Cdd:PRK08375 286 SLAALG---QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 344031602 338 NFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVS-WSWISMIMLSLLSFFSAAYTLYL 398
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
27-390 |
9.28e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 93.83 E-value: 9.28e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 27 MLFFVSFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLS-----LWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLV 101
Cdd:MTH00062 6 VGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDslsfyLILLVLFLGLYSQVMFYNLLSGVSRFFLFLSLIFSI 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 102 LTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYD 181
Cdd:MTH00062 86 LCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 182 LLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLqlmNLKYSFVWISISLVGGVLVS 261
Cdd:MTH00062 166 IVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI---FSGSFLGYLFLCCLFSVFFL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 262 LVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMP 341
Cdd:MTH00062 243 ITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSL 322
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 344031602 342 AMTLWWFLLSSANMAAPPTLNLLGEVSLLnsivsWSWISMIMLSLLSFF 390
Cdd:MTH00062 323 VLRVIVVFSFLSLCSFPPTIQFFCEVFLV-----SSSFGVLVYLLFWCF 366
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-391 |
3.56e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 90.18 E-value: 3.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLF--LLPVCFINNMYWMVQVMLFFVSFIFLMMN--------------NFMNYWSEISYFLGCDMLSYG-LVL 63
Cdd:PRK08667 6 FLGAILLLLAaaVIPLVFRHKRKRVWQSVLWLVIAIALLLFagslqlftgnpldiPLWGIAPGLDITFHIDRLAAFfIIL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 64 LSLWICSLMLLASESVN--KYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGV 141
Cdd:PRK08667 86 IGLVSLCVAIYSLGYNEhmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 142 YLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYDLLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 222 IMLKLGGYGLLRVISFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSY 301
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLD 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 302 TLM-----------IAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLL 370
Cdd:PRK08667 326 TLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
410 420
....*....|....*....|....*.
gi 344031602 371 NSI-----VSWSWISMIMLSLLSFFS 391
Cdd:PRK08667 406 ESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
104-315 |
4.81e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 83.51 E-value: 4.81e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 104 FSSMSLFMFYLFFESSLIPTLFLILgWGYQPERLQAGVYLLFyTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFN---- 179
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINdtst 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 180 -YDLLYFCLLLAF-LVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFVWIS------ 251
Cdd:PRK08668 193 gFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYRgvplfn 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344031602 252 --ISLVGGVLV---SLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:PRK08668 273 yiLAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-400 |
9.87e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 82.33 E-value: 9.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 55 DMLSYGLVLLSLWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQP 134
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 135 ERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMN------------FYLMNNFMFNYDL-LYFCLLL---AFLVKMPMF 198
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadlsakirglsFPLTGGLAGNPPLaLGVALALalwAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 199 LVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-------SFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLK 271
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVK 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 272 SLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLS 351
Cdd:PRK12667 321 RLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGA 400
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 344031602 352 SANMAAPPTLNLLGEVSLLNSIVSwswISMIMLSLLSFFSAAYTLYLYS 400
Cdd:PRK12667 401 LSLVGIPPLNGFFSKLLLFNALLE---SGFYLPALVLLIASAISLVGYF 446
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-395 |
2.50e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 77.85 E-value: 2.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 185 FCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-----SFLQLMNLKYSFVWISISLVGGVL 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNF 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 344031602 340 MPAMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIV-SWSWISMIMLSLLSFFSAAYT 395
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
187-362 |
6.74e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 76.85 E-value: 6.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 187 LLLAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFVWISISLVGGVLVSL 262
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGVL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 263 VCLRQTDLKSLIAYSSVAHMGIVLSGL-LTMTY----------WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLL 331
Cdd:PRK06521 293 YALAEHDLKRLLAYSTIENIGIIFVGLgLAMVFiaygmpllaaLALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDME 372
|
170 180 190
....*....|....*....|....*....|.
gi 344031602 332 INKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK06521 373 KLGGLIRRMP-WTAWAFLIGCLAISALPPLN 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-398 |
2.37e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 74.75 E-value: 2.37e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNF----YLMNNFMFNYDLLY 184
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylaVKMSENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 185 FCLLLA-FLVKMPMFLVHLWLPKAHVEAPVSGSMILagIMLKLGG-YGLLRVISFLQLMNLKYSFV-WISI-----SLVG 256
Cdd:PRK08376 223 LALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVgWVIIilgclTMFV 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 257 GVLVSLVclrQTDLKSLIAYSSVAHMGIVLSGL---------LTMTYWG---LCGSYTLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK08376 301 GVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYE 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 325 LGSRSLLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN------LLGEVS-LLNSIVSWSWISMIMLSLLSFFSAAYTLY 397
Cdd:PRK08376 378 TGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHTAF 456
|
.
gi 344031602 398 L 398
Cdd:PRK08376 457 F 457
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
187-387 |
3.00e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.50 E-value: 3.00e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 187 LLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR--VISFLQLMNLKYSFVWISISLVGGVLVSLVC 264
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 265 LRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAmT 344
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPL-T 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 344031602 345 LWWFLLSSANMA-APPTLNLLGEVSLLNSIVSWS-WISMIMLSLL 387
Cdd:PRK06458 379 GWGLMLGALAIAgMPPFGVFISEFLILTAGLARGpLLIAILLLLL 423
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-324 |
5.11e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 70.75 E-value: 5.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 103 TFSSMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNfmfnYDL 182
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLAT----ADP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 183 LYFCLL-LAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIsflqlmnLKYSFVWISISLVGG---V 258
Cdd:PRK07234 185 EAFALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-------LDVPGLDLIVRIFGVgtaL 257
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 344031602 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTmtywglCGSYTLmiAHGLCSSGLFCLANVSYER 324
Cdd:PRK07234 258 LGVLFALLEKDLKRMLAFSTISQLGFILAAPLV------GGLYAL--AHGLVKSTLFLCAGALPSR 315
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-398 |
5.62e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.55 E-value: 5.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 187 LLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNL--KYSFVWISISLVGGVLVSLVC 264
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAaeQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 265 LRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 344031602 345 LWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWS-WISMIMLSLLSFFSAAYTLYL 398
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-370 |
1.43e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 69.23 E-value: 1.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 103 TFSSMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYD- 181
Cdd:PRK12665 127 AFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPs 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 182 ----LLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL----QLMNLkysFVWISI- 252
Cdd:PRK12665 206 gtrtALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLfpggGLDTL---LMVVALl 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 253 SLVGGVLVSLVclrQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLI 332
Cdd:PRK12665 283 TMVVGILGAIA---QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|....*....
gi 344031602 333 NKGLLNFMPAMTLwWFLLSSANMAA-PPTLNLLGEVSLL 370
Cdd:PRK12665 360 LGGLAKASPLLAV-LFFVPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
194-370 |
1.12e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.99 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 194 KMPMFLVHLWLPKAHVEA-PVSgSMILAGIMLKLGGYGLLRvisFLQLM--NLKYSFVWISISLVGGVLVSLVCLRQTDL 270
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLR---FSPVFhdVAVWNWLLIIVGMITALMGAVFAVQKTDL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 271 KSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPaMTLWWFLL 350
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTI 375
|
170 180
....*....|....*....|.
gi 344031602 351 SSANMAA-PPTLNLLGEVSLL 370
Cdd:PRK12650 376 AALSMAAvPPLFGFVSKEGML 396
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-87 |
2.96e-11 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 60.23 E-value: 2.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 1 MLKIIFFLLFLLPVCFINNMYWM-----VQVMLFFVSFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90
....*....|..
gi 344031602 76 SESVNKYNNYKN 87
Cdd:pfam01059 81 SQKHLKSEPNNR 92
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-401 |
7.13e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.07 E-value: 7.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 50 YFLGCDMLSYGLVLLS----LWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLF 125
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLligfLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 126 LIlGWGYQPERLQAGV-YLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFNYDLLYFCLLLAFLVKMPMFLVHLWL 204
Cdd:PRK06589 155 LI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 205 PKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL----QLMNLKYSFVW-ISISLVGGVLVSLVCLRQTDLKSLIAYSSV 279
Cdd:PRK06589 234 PAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsYLQRIFAEFNWlIFIPIVSIFYSSLKALKTDNIKKILAYSTI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 280 AHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK06589 314 SQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 344031602 360 TLNLLGEVSLL-----NSIVSWSWISMIMLSLLSFFSAAYTLYLYSF 401
Cdd:PRK06589 394 FSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSS 440
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
111-398 |
4.77e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 61.69 E-value: 4.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 111 MFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG--IFYVMNKIGSMNFYLMNNFMFNYDLLY---- 184
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGfiMLYIMTGTNNITEILGQADHIKNHGLFipmi 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 185 FCLLLAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLMNLkYSFVWISISLVGGVLVSLV 263
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLGLSNM-YIYIVTFVGLITMLFGSIT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 264 CLRQTDLKSLIAYSSVAHMGIVLS------GLLTMTYWGLCGSYTL--------MIAHGLCSSGLFCLANVSYERLGSRS 329
Cdd:PRK12646 292 ALKQWDLKGILAYSTISQLGMIMAmvgiggGYAQHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEAGTRD 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 330 LLINKGLLNFMPAMTLwWFLLSSANMAAPPTLN-LLGEVSLLNSIVS------WSWISMIMLSLL----SFFSAAYTLYL 398
Cdd:PRK12646 372 IRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQtgqlsqFSLISMIIIVFIgviaSIFTFTYALYM 450
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-421 |
6.42e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 60.94 E-value: 6.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 187 LLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFVW--ISISLVGGVLVSLVC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 265 LRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344031602 345 LWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLL-SFFSAAYTLYLYsfsqHGKLFSGvysfSGGKIRE 421
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGaSVVEAVYYFRLI----HTMWFKG----EGERIRE 441
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-390 |
1.46e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.42 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 109 LFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNF--------YLMNNFMFNy 180
Cdd:PRK12663 130 LFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMahiamrlnDMGDTATLT- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 181 dLLYFCLLLAFLVKMPMFLVHlWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL---QLMNLKYSFVWIS-ISLVG 256
Cdd:PRK12663 208 -TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAaITMVI 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 257 GVLVSLVclrQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:PRK12663 286 GALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGL 362
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 344031602 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEVSLLN-SIVSWSWISMIMLSLLSFF 390
Cdd:PRK12663 363 YRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLITSLI 417
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-397 |
3.60e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.62 E-value: 3.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 109 LFMFYLFFEsslIPTLFLILGWGYQPERL---QAGVYLLFYTLLVSLPMLIGIFYVMNKIGSmnfYLMNNFMFN------ 179
Cdd:PRK12644 128 LLLLYVFWE---LTTVLSFLLIGHYAERAasrRAALQALLVTTAGGLAMLVGIIILGQAAGT---YRLSELLADpptgpa 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 180 YDLLYFCLLLAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvisflqlmnLKYSF----VWISISL 254
Cdd:PRK12644 202 VSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR---------LAPGFadvpVWRPTVL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 255 VGGVLVSLV----CLRQTDLKSLIAYSSVAHMG--IVLSGLLT--MTYWGLcgsyTLMIAHGLCSSGLFCLANVSYERLG 326
Cdd:PRK12644 272 VLGLATMLLggwrALRQHDLKLILAYGTVSQLGflTVLVGIGTrdAALAGL----AMLLAHALFKAALFLVVGIIDHSTG 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 344031602 327 SRSLLINKGLLNFMPAMtLWWFLLSSANMAA-PPTLNLLGEVSLLNSIV------SWSWISMIMLSLLSFFSAAYTLY 397
Cdd:PRK12644 348 TRDIRKLSGLGRRQPVL-AVVAALAAASMAGlPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
181-397 |
1.14e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 50.74 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 181 DLLYFCLLLAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLMNLKYSFVWISISLVGGVL 259
Cdd:PRK06525 207 YLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLY 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTY---WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:PRK06525 286 GFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGV 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 344031602 337 LNFMPAMTLWWFLLSSANMAAPP------TLNLLGEVSLLNSIVSWSWISMIMLSLLSFFSAAYTLY 397
Cdd:PRK06525 366 LKKLPLVGVGFCVAALAITGVPPfngffsKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLR 432
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
2.23e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 49.83 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvisfLQLMNLKYSFVWISISLVGGVLVSLV----CLRQTDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILT----LSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 276 YSSVAHMGIVLSGL-----------LTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 344031602 345 LwWFLLSSANMAAPPTLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-393 |
4.97e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 48.76 E-value: 4.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 106 SMSLFMFYLFFESSLIPTLFLIlgwGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYVMNKIGSMN---FYLMNN 175
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSlseLLASGD 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 176 FMFNYDLlYFCLLLAFLV----KMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvisflqlMN--LKYSFV 248
Cdd:PRK12647 187 VIREHPL-YLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR-------LNpvLGGTPL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 249 W-ISISLVGG---VLVSLVCLRQTDLKSLIAYSSVAHMgivlsGLLTMtywgLCGSYT---------LMIAHGLCSSGLF 315
Cdd:PRK12647 258 WqTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSAL-----GTLVM----LLGLGSelaikaavlFLVAHSLYKGALF 328
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344031602 316 CLANVSYERLGSRSLLINKGLLNFMPaMTLWWFLLSSANMAA-PPTLNLLGEVSLLNSIVSWSWISMImLSLLSFFSAA 393
Cdd:PRK12647 329 MVAGIIDHETGTRDITKLGGLRRAMP-ITAAAALLAALSMAGlPPLFGFLAKELIYEALLEAPLWSLI-LTVAAVLGNA 405
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
170-393 |
5.48e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.63 E-value: 5.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 170 FYLMNNFMFNYDLLYFCLLLA---FLVKMPM--FLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLK 244
Cdd:PRK06459 144 FIISGTTNFSYLPSPVPLILAsfgFIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIG 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 245 YSFVWI----SISLVGGVLVSLVClrqTDLKSLIAYSSVAHMGIVLS--GLLTMTY--------WGLCGSYTLMIAHGLC 310
Cdd:PRK06459 224 YFGLTIlaigAFSILFGALYAYVS---ENVKGLLAFSTIENNGAILValGLYMVTKqlitsiehFSLITVILYSFAHSVA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 311 SSGLFCLANVSYERLGSRSLLINKGLlnfmpaMTLWWFLLSSANMAAPPTLNLLGEVSLLNSIVSWSWISMIMLSLLSFF 390
Cdd:PRK06459 301 KTGLFLSSGLQEKQSITYSKKIRNRW------IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIV 374
|
...
gi 344031602 391 SAA 393
Cdd:PRK06459 375 TGA 377
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
154-394 |
1.66e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.03 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 154 MLIGIFYVMNKIGSMNFYLMNNFMFNYD----LLYFCLLL---AFLVKMPMFLVHLWLPKAHVEAPVSGSMILA------ 220
Cdd:COG1007 169 LLYGISLLYGATGSLNLAGIAAALAAGGanspLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAtapkia 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 221 --GIMLKLGGYGLLRVISFLQLMnlkysFVWISI-SLVGGvlvSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGL 297
Cdd:COG1007 249 afAALLRLLVEAFPGLAADWQLL-----LAVLAVlSMTVG---NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGV 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 298 CGSYTLMIAHGLCSSGLF-CLANVSYERLGSRSLLINKGLLNFMP----AMTLwwFLLSSANMaaPPTLNLLGEVSLLNS 372
Cdd:COG1007 321 SAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPllalAMTI--FLLSLAGI--PPTAGFFGKFYVFSA 396
|
250 260
....*....|....*....|....
gi 344031602 373 IVS--WSWISMIMLsLLSFFSAAY 394
Cdd:COG1007 397 AVEagLYWLAVIAV-LNSVISAYY 419
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
182-315 |
3.02e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 46.39 E-value: 3.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 182 LLYFCLLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMlklggygllRVISFLQLMNLKY-SFVWISISLVGGVLV 260
Cdd:MTH00198 300 LGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIP---------KFTVYILLTSLVItSKLLLSVAIISLVVG 370
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 344031602 261 SLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:MTH00198 371 AFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-399 |
3.85e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.91 E-value: 3.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 108 SLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGSMNFYLMNNFMFN------YD 181
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTilssplLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 182 LLYFCLLLAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLmnlkYSFVWISISLVGGV-- 258
Cdd:COG1009 212 LILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFAL----SPVWLTVVAIIGAIta 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 259 -LVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLltmtywGLcGSYT----LMIAHGLCSSGLFCLANVSYERLGSRSLLIN 333
Cdd:COG1009 287 lFAALIALAQTDIKRVLAYSTVSQLGYMFLAL------GV-GAYVaalfHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 334 KGLLNFMPAmTLWWFLLSSANMAA-PPTLNLLGEVSLLNSIV---SWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:COG1009 360 GGLRKKMPI-TAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
187-315 |
5.05e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 45.58 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 187 LLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMlKLGGYG-LLRV--ISFLQLMNLKYSFVWIsISLVGGVLVSLV 263
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLlvVAFGGLSEDWQQVLAI-IAIASMLVGNLA 287
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 344031602 264 CLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:PRK05777 288 ALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-288 |
9.56e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 41.42 E-value: 9.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 109 LFMFYLFFESSLIPTLFLILGWGyQPERLQAGV-YLLFYTLLVSLpMLIGIFYVMNKIGSMNFYLMNNFMFNYDLLyfcL 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGTAAWL---I 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 188 LLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMnlkysfVWI-SISLVGGVLVSLVclr 266
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIgAAMAVYGVFFALL--- 260
|
170 180
....*....|....*....|..
gi 344031602 267 QTDLKSLIAYSSVAHMGIVLSG 288
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAG 282
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-234 |
1.23e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 40.99 E-value: 1.23e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 344031602 187 LLLAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRV 234
Cdd:PRK12666 216 LLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRL 262
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
104-362 |
1.78e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.97 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 104 FSSMSLFMFyLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKIGS------MNFYLMNNFM 177
Cdd:PRK12649 129 FSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTydiatiLQDSELIENI 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 178 FNYDLLYFCLLLAFL---VKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQlmNLKYSFVWIS-I 252
Cdd:PRK12649 208 KGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 253 SLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTY----WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSR 328
Cdd:PRK12649 285 GMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATR 364
|
250 260 270
....*....|....*....|....*....|....
gi 344031602 329 SLLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK12649 365 DIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
186-286 |
1.96e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 186 CLLLAFLVKMPMFLVHLWLPKAhVEAPVSGSMILAGIMLKLGGYGLLRvisFLQLMNLKYSFVWIsISLVGG---VLVSL 262
Cdd:PRK08168 205 LLVLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIR---FAPLLEQAPPARWL-LVLVGLataVLAGL 279
|
90 100
....*....|....*....|....
gi 344031602 263 VCLRQTDLKSLIAYSSVAHMGIVL 286
Cdd:PRK08168 280 VMLTRISIKVRLAWSTVAQMGFML 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
155-315 |
2.96e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.93 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 155 LIGIFYVMNKIGSMNF----YLMNNFMFNYDLLYFCLLL---AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLG 227
Cdd:TIGR01770 170 LFGISLIYGFTGSLNFedllLFLSNGMLNISLLLLGIVLilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIA 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 228 GYGLLRVISFLQLMNlkYSFVWISISLVGGVLV----SLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTL 303
Cdd:TIGR01770 249 IFAVFLRLFLYILFG--FSEAWQIFLAIIAFLSmligNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFY 326
|
170
....*....|..
gi 344031602 304 MIAHGLCSSGLF 315
Cdd:TIGR01770 327 IFIYALMSLGAF 338
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
109-398 |
3.72e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLpMLIGIFYVMNKIGSMNFYLMNNFMFNyDLLYFCLL 188
Cdd:PRK06277 122 IFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDIHNALLV-NPTSPVIY 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 189 LAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLM-----NLKY----SFVWISISLVGGVL 259
Cdd:PRK06277 200 GGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYfpsaQGVLIALSVLAMVF 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344031602 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLSGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNF 339
Cdd:PRK06277 280 GVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPV 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 344031602 340 MPAMTLwWFLLSSANMAAPPTLN------LLGEVSLLNSIVSWSwISMIMLSLLSFFSAAYTLYL 398
Cdd:PRK06277 360 MPVVAF-MVLCAKLAISGVPPFNgfqsklMLAQAAMQANMPELA-IIMIIVSIGTFVSMMKAFYL 422
|
|
| |
