|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-205 |
8.49e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 214.62 E-value: 8.49e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFY 81
Cdd:MTH00165 318 NMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIY 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 82 YSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIVLPYYLKFLTIIVVVLGSYLGYFVSNFNF 161
Cdd:MTH00165 398 YSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSL 477
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 342161521 162 SYGLFSLNMLPYVSFFGSMWFMPFLSTSFISYLPLKMGYYSSKS 205
Cdd:MTH00165 478 SYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKS 521
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
6-197 |
2.58e-38 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 138.62 E-value: 2.58e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFYYSMS 85
Cdd:MTH00209 318 SQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLW 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 86 GDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIVLPYYLKFLTIIVVVLGSYLGYFVSNFNFsygl 165
Cdd:MTH00209 398 GPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF---- 473
|
170 180 190
....*....|....*....|....*....|..
gi 342161521 166 FSLNMLPYVSFFGSMWFMPFLSTSFISYLPLK 197
Cdd:MTH00209 474 FLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMK 505
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
6-205 |
5.40e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 135.28 E-value: 5.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFYYSMS 85
Cdd:MTH00207 322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLW 401
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 86 GDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIVLPYYLKFLTIIVVVLGSYLGYFVSNFNFSYGL 165
Cdd:MTH00207 402 SPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTP 481
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 342161521 166 FSLNMLPYVSFFGSMWFMPFLSTSFISYLPLKMGYYSSKS 205
Cdd:MTH00207 482 LLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKL 521
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
4-199 |
8.88e-35 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 128.81 E-value: 8.88e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 4 SDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFYYS 83
Cdd:MTH00151 317 SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCL 396
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 84 MSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIVLPYYLKFLTIIVVVLGSYLGYFVSNFNFSY 163
Cdd:MTH00151 397 VWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSS 476
|
170 180 190
....*....|....*....|....*....|....*.
gi 342161521 164 GLFSLNmlpyVSFFGSMWFMPFLSTSFISYLPLKMG 199
Cdd:MTH00151 477 SKMVKL----SFFFSSMWFLSPLSSQPLKSLSLKLS 508
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
75-205 |
1.08e-27 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 103.01 E-value: 1.08e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 75 YSFRLFYYSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIVLPYYLKFLTIIVVVLGSYLGY 154
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 342161521 155 FVSNFNFSYGLFSLNMlPYVSFFGSMWFMPFLSTSFISYLPLKMGYYSSKS 205
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ 130
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
2-203 |
5.23e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 104.26 E-value: 5.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFY 81
Cdd:MTH00211 343 GLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIF 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 82 YSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIV-LPYYLKFLTIIVVVLGSYLGYFVSNfn 160
Cdd:MTH00211 423 LSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVN-- 500
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 342161521 161 fsyGLFSLNMLPYVSFFGSMWFMPFLSTSFISYLPLKMGYYSS 203
Cdd:MTH00211 501 ---LTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLS 540
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
2-194 |
5.04e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 101.59 E-value: 5.04e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFY 81
Cdd:MTH00208 375 SLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIF 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 82 YSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPyMIVLPYYLKFLTIIVVVLGSYLGyFVSNFNF 161
Cdd:MTH00208 455 FCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFS-FSFLLSL 532
|
170 180 190
....*....|....*....|....*....|...
gi 342161521 162 SYGLFSLNmlpYVSFFGSMWFMPFLSTSFISYL 194
Cdd:MTH00208 533 SSNPINSN---FFSFLSNQWFFVNISHSIIISF 562
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
2-153 |
6.32e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 95.62 E-value: 6.32e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFY 81
Cdd:MTH00004 348 NLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMIL 427
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 342161521 82 YSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPI-PYMIVLPYYLKFLTIIVVVLGSYLG 153
Cdd:MTH00004 428 LVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLA 500
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
2-184 |
1.63e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 94.20 E-value: 1.63e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFY 81
Cdd:MTH00066 346 SLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIY 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 82 YSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFPIPYMIV-LPYYLKFLTIIVVVLGSYLGYFVSNFN 160
Cdd:MTH00066 426 FSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKIT 505
|
170 180
....*....|....*....|....
gi 342161521 161 FSyglfSLNMLPYVSFFGSMWFMP 184
Cdd:MTH00066 506 SK----TTPKTKMHSFSNLLAFFP 525
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
2-149 |
3.81e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 93.38 E-value: 3.81e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFY 81
Cdd:MTH00108 349 NLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIF 428
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 82 YSMSGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLIFP--IPYMiVLPYYLKFLTIIVVVLG 149
Cdd:MTH00108 429 FALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILG 497
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
2-84 |
1.39e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 82.96 E-value: 1.39e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 2 NLSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRL-F 80
Cdd:MTH00137 354 SLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvF 433
|
....
gi 342161521 81 YYSM 84
Cdd:MTH00137 434 FVSM 437
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
3-201 |
1.44e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 83.13 E-value: 1.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 3 LSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFYY 82
Cdd:MTH00210 351 VSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYL 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 83 SMSGDNNfcSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWLI--FPIPYMI--VLPYYLKFLTIIVVVLGSYLGYFVSN 158
Cdd:MTH00210 431 TFITNTN--SKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGkeVVLSNVIppIVPNSIKMIPLLFSLLGALLAFVIYN 508
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 342161521 159 ------FNFSYGLFSLNMLPYVSFFGSMWFMPFLSTSFISYLPLKMGYY 201
Cdd:MTH00210 509 smvfliKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHL 557
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
3-200 |
1.06e-17 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 80.51 E-value: 1.06e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 3 LSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFYY 82
Cdd:MTH00020 350 LSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYL 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 83 S-MSGDNNFCSSFSFDDKG-YYISFGMISLLFVAVFGGSFLSWLI--FPIPYMIVLPYYLKFLTIIVVVLGSYLG---YF 155
Cdd:MTH00020 430 TfLSNTNLKKAVFFHLHEGdWNLLLPLGILALGSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGLViilYF 509
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 342161521 156 VSNFNFSYGLFSLNMLPYvSFFGSMWFMPFLSTSFISYLPLKMGY 200
Cdd:MTH00020 510 YSSKTFRVPFSFIGRNSY-TFLGSAWQFNYILNYFLIKKIWKGGH 553
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
5-155 |
1.43e-16 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 77.12 E-value: 1.43e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 5 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEmVCLSWINCLIFFLFFFSTGLTASYSFRLFYYSM 84
Cdd:PRK06590 359 HEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVF 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 85 SGDNnfcssfsfDDKGY-------YISFGMISLLFVAVFGG-----SFLSWLIFP-----IPYMIVLPYYLKFLTIIVVV 147
Cdd:PRK06590 438 HGKE--------KEKIHhphespaVMTLPLIVLAVLSVFAGalivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVAL 509
|
....*...
gi 342161521 148 LGSYLGYF 155
Cdd:PRK06590 510 AGIALAWL 517
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-156 |
3.71e-16 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 75.96 E-value: 3.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILE-MVCLSWINCLIFFLFFFSTGLTASYSFRLFYYSM 84
Cdd:COG1009 353 TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVF 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 85 SGDNNFCSSFSFDDKGYYISFGMISLLFVAVFGGSFLSWL---------IFPIPYMIVLPYYLKFLTIIVVVLGSYLGYF 155
Cdd:COG1009 433 FGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYL 512
|
.
gi 342161521 156 V 156
Cdd:COG1009 513 L 513
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
6-87 |
1.17e-13 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 68.90 E-value: 1.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSwiNCLIFFLFFFSTGLTASYSFRLFYYSMS 85
Cdd:PRK07376 378 AQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFE 455
|
..
gi 342161521 86 GD 87
Cdd:PRK07376 456 GE 457
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
6-110 |
3.40e-09 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 55.67 E-value: 3.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMvclSWINCLIFFLFFFST-GLTASYSFRLFYYSM 84
Cdd:CHL00025 378 SQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND---SWLYSPIFAIIAWSTaGLTAFYMFRIYLLTF 454
|
90 100
....*....|....*....|....*.
gi 342161521 85 SGDnnFCSSFSFDDKGYYISFGMISL 110
Cdd:CHL00025 455 EGH--LRVHFQNYSGKKNSSFYSISL 478
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
5-51 |
5.01e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.19 E-value: 5.01e-07
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 342161521 5 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEM 51
Cdd:MTH00032 369 DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
4-68 |
2.15e-06 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 46.92 E-value: 2.15e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 342161521 4 SDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFS 68
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
6-82 |
2.09e-05 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 44.37 E-value: 2.09e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVcLSWINCLIFFLFFFSTGLTASYSFRLFYY 82
Cdd:COG0651 353 TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-81 |
1.12e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 42.27 E-value: 1.12e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 342161521 5 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTgLTASYSFRLFY 81
Cdd:PRK12667 375 GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
6-201 |
3.05e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 41.06 E-value: 3.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWINCLIFFLFFFSTGLTASYSFRLFYYSMS 85
Cdd:MTH00095 306 QQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFL 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342161521 86 GDNNFCSSFSFDDKGYYISFGMIsllfvaVFGGSFLSWLIFPIPYMIVLPYYLKFLTIIVVVLgsyLGYFVSNFNFSYGL 165
Cdd:MTH00095 386 SFSKVVNVYSSSVLMNFLSLMLV------FFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLF---MIMLFSFFFFKLLF 456
|
170 180 190
....*....|....*....|....*....|....*.
gi 342161521 166 FSLNMLPYVSFFGSMWFMPFLSTSFISYLPLKMGYY 201
Cdd:MTH00095 457 KELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYK 492
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-73 |
4.70e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 37.20 E-value: 4.70e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSkdlILEMVCLSWINCLIFF-LFFFSTGLTA 73
Cdd:PRK07390 362 TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVgVLLLVNALTA 427
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
6-50 |
5.04e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 37.33 E-value: 5.04e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILE 50
Cdd:PRK12650 353 TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLT 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
6-80 |
6.39e-03 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 36.98 E-value: 6.39e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 342161521 6 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGLPFLAGFYSKDLILEMVCLSWIncLIFFLFFFSTGLTASYSFRLF 80
Cdd:COG1008 356 TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWMY 428
|
|
| |
