CBN-HIS-60 protein [Caenorhabditis brenneri]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
PLN00035 super family | cl29687 | histone H4; Provisional |
1-49 | 1.83e-22 | ||
histone H4; Provisional The actual alignment was detected with superfamily member PLN00035: Pssm-ID: 177669 [Multi-domain] Cd Length: 103 Bit Score: 81.80 E-value: 1.83e-22
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Name | Accession | Description | Interval | E-value | ||
PLN00035 | PLN00035 | histone H4; Provisional |
1-49 | 1.83e-22 | ||
histone H4; Provisional Pssm-ID: 177669 [Multi-domain] Cd Length: 103 Bit Score: 81.80 E-value: 1.83e-22
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H4 | smart00417 | Histone H4; |
18-49 | 6.07e-13 | ||
Histone H4; Pssm-ID: 128694 Cd Length: 74 Bit Score: 56.78 E-value: 6.07e-13
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HFD_H4 | cd22912 | histone-fold domain found in histone H4 and similar proteins; Histone H4 is a core component ... |
22-49 | 1.23e-11 | ||
histone-fold domain found in histone H4 and similar proteins; Histone H4 is a core component of the nucleosome, which wraps and compacts DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication, and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called the histone code, and nucleosome remodeling. The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Pssm-ID: 467037 [Multi-domain] Cd Length: 79 Bit Score: 53.38 E-value: 1.23e-11
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Name | Accession | Description | Interval | E-value | ||
PLN00035 | PLN00035 | histone H4; Provisional |
1-49 | 1.83e-22 | ||
histone H4; Provisional Pssm-ID: 177669 [Multi-domain] Cd Length: 103 Bit Score: 81.80 E-value: 1.83e-22
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PTZ00015 | PTZ00015 | histone H4; Provisional |
18-49 | 1.94e-14 | ||
histone H4; Provisional Pssm-ID: 185397 Cd Length: 102 Bit Score: 61.29 E-value: 1.94e-14
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H4 | smart00417 | Histone H4; |
18-49 | 6.07e-13 | ||
Histone H4; Pssm-ID: 128694 Cd Length: 74 Bit Score: 56.78 E-value: 6.07e-13
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HFD_H4 | cd22912 | histone-fold domain found in histone H4 and similar proteins; Histone H4 is a core component ... |
22-49 | 1.23e-11 | ||
histone-fold domain found in histone H4 and similar proteins; Histone H4 is a core component of the nucleosome, which wraps and compacts DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication, and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called the histone code, and nucleosome remodeling. The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Pssm-ID: 467037 [Multi-domain] Cd Length: 79 Bit Score: 53.38 E-value: 1.23e-11
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PLN00163 | PLN00163 | histone H4; Provisional |
1-49 | 3.22e-11 | ||
histone H4; Provisional Pssm-ID: 165730 Cd Length: 59 Bit Score: 52.00 E-value: 3.22e-11
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Blast search parameters | ||||
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