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Conserved domains on  [gi|335892878|ref|NP_001229465|]
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UNC93-like protein MFSD11 isoform 2 [Homo sapiens]

Protein Classification

UNC93-like protein MFSD11( domain architecture ID 13024469)

unc-93-like protein MFSD11 belongs to the major facilitator superfamily (MFS) of transporters that facilitate the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
11-383 3.36e-177

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340965  Cd Length: 387  Bit Score: 498.71  E-value: 3.36e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  11 IIILGVAFMFMFTAFQTCGNVAQTVIRSLNR--TDFHGSGYTSMAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSM 88
Cdd:cd17407    1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLNQgnTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  89 YIAVFIQPFPWSFYTASVFIGIAAA----------------------------------------------------ESD 116
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAvlwtgqgnfltinsdsetigrnsgifwallqcsllfgnlyvyfafqgkttisDHD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 117 RRTVFIALTVISLVGTVLFFLIRKPDSENvlgedessddqdmevnesaqnnltkavdafkksfklcvtKEMLLLSITTAY 196
Cdd:cd17407  161 RRTVFIVLTVISLVGVVLLFLLRKPPSEP---------------------------------------KEMLLLSVTFAY 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 197 TGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-NRFGRNPVVLLGILVHFIAFYLIFL 275
Cdd:cd17407  202 TGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYLIFL 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 276 NMPGDAPIApvKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSN 355
Cdd:cd17407  282 NIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYSN 359
                        410       420
                 ....*....|....*....|....*...
gi 335892878 356 YLLLHWQLLVMVIFGFFGTISFFTVEWE 383
Cdd:cd17407  360 YLLLQWQLLILVVFGFLGTISFFLVEWK 387
 
Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
11-383 3.36e-177

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 498.71  E-value: 3.36e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  11 IIILGVAFMFMFTAFQTCGNVAQTVIRSLNR--TDFHGSGYTSMAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSM 88
Cdd:cd17407    1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLNQgnTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  89 YIAVFIQPFPWSFYTASVFIGIAAA----------------------------------------------------ESD 116
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAvlwtgqgnfltinsdsetigrnsgifwallqcsllfgnlyvyfafqgkttisDHD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 117 RRTVFIALTVISLVGTVLFFLIRKPDSENvlgedessddqdmevnesaqnnltkavdafkksfklcvtKEMLLLSITTAY 196
Cdd:cd17407  161 RRTVFIVLTVISLVGVVLLFLLRKPPSEP---------------------------------------KEMLLLSVTFAY 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 197 TGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-NRFGRNPVVLLGILVHFIAFYLIFL 275
Cdd:cd17407  202 TGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYLIFL 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 276 NMPGDAPIApvKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSN 355
Cdd:cd17407  282 NIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYSN 359
                        410       420
                 ....*....|....*....|....*...
gi 335892878 356 YLLLHWQLLVMVIFGFFGTISFFTVEWE 383
Cdd:cd17407  360 YLLLQWQLLILVVFGFLGTISFFLVEWK 387
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-378 4.58e-105

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 315.03  E-value: 4.58e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878   45 HGSGYTSMAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAA----------- 113
Cdd:pfam05978   7 AYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAflwtgqgsyls 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  114 --------------------------------------------ESDRRTVFIALTVISLVGTVLFFLIRKPDSENVLGE 149
Cdd:pfam05978  87 enstretierntsiswamlqssligggiflfivfqsggqgdeisDGQIKLLYSVFTAISIVGIVVFAFLPSPDYENVLSS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  150 DESSddqdmevnesaqnnlTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLS 229
Cdd:pfam05978 167 KEKI---------------QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTTYLIAIY 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  230 GIFIGIGEILGGSLFGLLSKNNR-FGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGtdSSAYIKSSKEVAILCSFL 308
Cdd:pfam05978 232 SISTGLGQIIGGIFFGPLGKRIRkFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDG--PGLLITPSLYLAFIISFL 309
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  309 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFFGTISFF 378
Cdd:pfam05978 310 LGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
 
Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
11-383 3.36e-177

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 498.71  E-value: 3.36e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  11 IIILGVAFMFMFTAFQTCGNVAQTVIRSLNR--TDFHGSGYTSMAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSM 88
Cdd:cd17407    1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLNQgnTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  89 YIAVFIQPFPWSFYTASVFIGIAAA----------------------------------------------------ESD 116
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAvlwtgqgnfltinsdsetigrnsgifwallqcsllfgnlyvyfafqgkttisDHD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 117 RRTVFIALTVISLVGTVLFFLIRKPDSENvlgedessddqdmevnesaqnnltkavdafkksfklcvtKEMLLLSITTAY 196
Cdd:cd17407  161 RRTVFIVLTVISLVGVVLLFLLRKPPSEP---------------------------------------KEMLLLSVTFAY 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 197 TGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-NRFGRNPVVLLGILVHFIAFYLIFL 275
Cdd:cd17407  202 TGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYLIFL 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 276 NMPGDAPIApvKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSN 355
Cdd:cd17407  282 NIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYSN 359
                        410       420
                 ....*....|....*....|....*...
gi 335892878 356 YLLLHWQLLVMVIFGFFGTISFFTVEWE 383
Cdd:cd17407  360 YLLLQWQLLILVVFGFLGTISFFLVEWK 387
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-378 4.58e-105

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 315.03  E-value: 4.58e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878   45 HGSGYTSMAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIAAA----------- 113
Cdd:pfam05978   7 AYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAflwtgqgsyls 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  114 --------------------------------------------ESDRRTVFIALTVISLVGTVLFFLIRKPDSENVLGE 149
Cdd:pfam05978  87 enstretierntsiswamlqssligggiflfivfqsggqgdeisDGQIKLLYSVFTAISIVGIVVFAFLPSPDYENVLSS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  150 DESSddqdmevnesaqnnlTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLS 229
Cdd:pfam05978 167 KEKI---------------QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTTYLIAIY 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  230 GIFIGIGEILGGSLFGLLSKNNR-FGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGtdSSAYIKSSKEVAILCSFL 308
Cdd:pfam05978 232 SISTGLGQIIGGIFFGPLGKRIRkFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDG--PGLLITPSLYLAFIISFL 309
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  309 LGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFFGTISFF 378
Cdd:pfam05978 310 LGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
11-382 1.74e-83

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 259.97  E-value: 1.74e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  11 IIILGVAFMFMFTAFQTCGNVAQTVIRSlnrtdfhGSGYTSMAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSMYI 90
Cdd:cd17338    1 VIILSFGFLLIFLAYSALQNLQTSLHEN-------GLGSISLGILYSSFAVSSFIAPLLVKLLGEKITLVLGGLGYAIFI 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  91 AVFIQPFPWSFYTASVFIGIAAA--------------------------------------------------ESDRRTV 120
Cdd:cd17338   74 ASNIFPIWGTLVPASIILGFAAAilwtaqgtyitrisdesnigrnfgifwsifqlsqvfgnlislallnhskgSSGTTIL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 121 FIALTVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVnesaqnnltkaVDAFKKSFKLCVTKEMLLLSITTAYTGLE 200
Cdd:cd17338  154 FIVFMAIMLVGIILLFFLRGPDNEVITEIESSSVGESMEK-----------KNLFKLPFTLLKDKRFLLLIPLLIYSGLE 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 201 LTFFSGVYGTCIGATNkfgaEEKSLIGLSGIFIGIGEILGGSLFGLLSKNnRFGRNPVVLLGILVHFIAFYLIFLNMPGD 280
Cdd:cd17338  223 QTFFSGVFTLIIGTPT----TGIARVGYVMAVYGFGDALGSLVAGLLSDW-RFGRIVLAVIGAFVHIASLILLFLSGNVT 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 281 APIAPvkgtdssayiksSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLH 360
Cdd:cd17338  298 PYGLG------------GSWLAYVSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQSIATAIAYFLSPYLPLF 365
                        410       420
                 ....*....|....*....|..
gi 335892878 361 WQLLVMVIFGFFGTISFFTVEW 382
Cdd:cd17338  366 VKLFVLLALLILLAIFFLFVEL 387
MFS_unc93A_like cd17406
Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of ...
11-383 1.83e-17

Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Caenorhabditis elegans Uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93), human protein unc-93 homolog A (HmUnc-93A or UNC93A), and similar proteins. Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. This unc93A-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340964 [Multi-domain]  Cd Length: 390  Bit Score: 83.07  E-value: 1.83e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  11 IIILGVAFMFMFTAFQTCGNVaQTvirSLNRTDfhGSGYTSMAIIYGVFSASNLITPSVV-AIVGPQLSMFASGLFYSMY 89
Cdd:cd17406    1 LLVISFAFLLLFTAFQGLQNL-QS---SLNSDD--GLGVVSLSVIYASLIVSCMFLPPLLiKKLGCKWTIVLSMFCYVLY 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878  90 IAVFIQPFPWSFYTASVFIGIAAA---------------------ESDRRTV--------FIALTVISLVGTVLFFLIRK 140
Cdd:cd17406   75 IAANFYPSWYTLIPASIILGFGAAplwsakctyltesgnryakltGKSGDDVinrffgifFMIFQSSQIWGNLISSLVFS 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 141 PDSEN-----------------VLGEDESSDDQDmevnESAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTF 203
Cdd:cd17406  155 QSLIYtllgiylgcgilaviivAVFLDPLKRDKE----KRKQETKFSVLSLLLATFKHLKDPRQLLLIPLTIYSGLEQAF 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 204 FSGVYgTCIGATNKFGAEEkslIGLSGIFIGIGEILGGSLFGLLSKnnRFGRNPVVLLGILVHF---IAFYLIFLNmPGD 280
Cdd:cd17406  231 LSGDF-TKSYVTCALGIWN---VGYVMICFGVVNALCSFLFGRLVK--YTGRIPLFALGALVNLgliIALLLWEPD-PDQ 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 335892878 281 apiapvkgtdssayiksskeVAILCSF--LLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLL 358
Cdd:cd17406  304 --------------------LAIFFVFagLWGMADAVWQTQINALYGVLFPKNKEAAFSNYRLWESLGFVIAFAYSNFLC 363
                        410       420
                 ....*....|....*....|....*
gi 335892878 359 LHWQLLVMVIFGFFGTISFFTVEWE 383
Cdd:cd17406  364 VYVKLYILLAVLLLGMVGYGVVEYI 388
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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