|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 729.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 241 GYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 321 GLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 333236315 401 TLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMWGWC 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 688.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEiGWTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSE-TMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 241 GYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 321 GLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 333236315 401 TLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMWGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 679.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEIGwTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 241 GYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 321 GLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 333236315 401 TLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-460 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 659.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEIGWTTSNSYlATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLF-FSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 241 GYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 321 GLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 401 TLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMWGWCY 460
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 560.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 3 KVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 83 NHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 163 VALLLLQQSTGTLSMLVIQYSQpllLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 243 GMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 323 VSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 333236315 403 ITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELM 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.38e-168 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 481.40 E-value: 2.38e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 241 GYGMMRMM-IMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIA 319
Cdd:MTH00044 241 GYGLIRLInLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 320 HGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGA 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 333236315 400 GTLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.23e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 372.18 E-value: 1.23e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLwttttTHSLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRqrLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKKNNYSN--LFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMlviqysqPLLLNSWGHKIWWAGCLI-AFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKL 239
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSF-------FLLNFFGSLNFLWYLSMIlAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 240 GGYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIA 319
Cdd:MTH00163 227 GGYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 320 HGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGA 399
Cdd:MTH00163 307 HGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLML 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 333236315 400 GTLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMWGW 458
Cdd:MTH00163 387 LSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-459 |
2.77e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 370.32 E-value: 2.77e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 37 ISLSWLNwTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILASQNHINSepISRQRLYIMLLTSLQTFLIMAFGATEI 116
Cdd:MTH00150 1 LSLLLLY-SSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 117 IMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLNSWghkIW 196
Cdd:MTH00150 78 LMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 197 WAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSI 276
Cdd:MTH00150 155 GLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLI 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLT 356
Cdd:MTH00150 235 CLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 357 AVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHL 436
Cdd:MTH00150 315 SLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEML 394
|
410 420
....*....|....*....|...
gi 333236315 437 LMALHLIPVILLVTKPELMWGWC 459
Cdd:MTH00150 395 LLLLHWVPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
1.44e-117 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 351.74 E-value: 1.44e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPtIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSeIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLL-LPLIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRqrLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 161 LLVALLLLQQSTGTLSMLVIQYSQPLLLNSwghKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 241 GYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 321 GLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 333236315 401 TLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-454 |
8.84e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 334.26 E-value: 8.84e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 28 TTHSLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILASQNHINSEpiSRQRLYIMLLTSLQTFL 107
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 108 IMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLviqYSQPLL 187
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 188 LNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILAL 267
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 268 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILAR 347
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 348 GLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPNHIMKL 427
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
410 420
....*....|....*....|....*..
gi 333236315 428 PPFHTREHLLMALHLIPVILLVTKPEL 454
Cdd:MTH00205 419 LAISEREYYILILHWFPLNILILKLKI 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-448 |
3.57e-91 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 285.05 E-value: 3.57e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 9 IMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTS-------EIGWTTS---NSYLATDPLSTPLLVLTCWLLPLMI 78
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTLLLSLYLLAGFDPGTggfqfveSYPWIPSlgiSYHLGVDGISLPLVLLTALLTPLAI 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 79 LASQNHINSepisRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGS 158
Cdd:COG1008 100 LASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAGS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 159 LPLLVALLLLQQSTGTLSMLVIQYSQpLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLK 238
Cdd:COG1008 175 LLMLVAILALYFLAGALTFDIAELAA-APLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 239 LGGYGMMRMMIMLDPL-SKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILM 317
Cdd:COG1008 254 MGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQM 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 318 IAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALT 397
Cdd:COG1008 334 VSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILA 413
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 333236315 398 GAGTLITAGYSLYMFlmsQR---GPTPNHIMKLPPFHTREHLLMALHLIPVILL 448
Cdd:COG1008 414 ALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-448 |
5.77e-85 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 269.38 E-value: 5.77e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 56 YLATDPLSTPLLVLTCWLLPLMILASQNHINSepisRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:PRK05846 77 HLGVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 136 RWGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQQSTGTLSMLVIQYSQpllLNSWGHKIWWAGCLIAFLVKMPLY 211
Cdd:PRK05846 153 VWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNLP---LPPGVQYWLFLAFFIAFAVKMPMF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 212 GVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPL-SKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 291 SVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLAL 370
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGL 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 333236315 371 PPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILL 448
Cdd:PRK05846 389 PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLL 466
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-448 |
2.28e-79 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 254.48 E-value: 2.28e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 57 LATDPLSTPLLVLTCWLLPLMILASQNHINSepisRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 137 WGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSQPLllNSWGHKIWWAGCLIAFLVKMPLYGVHLW 216
Cdd:TIGR01972 149 WGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPL--PFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 217 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDP-LSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 296 GLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPN 375
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 333236315 376 LMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMFlmsQR----GPTPNHIMKLPPFHTREHLLMALHLIPVILL 448
Cdd:TIGR01972 386 FVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY---KRvffgELSNPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
43-448 |
2.75e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 236.11 E-value: 2.75e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 43 NWTSEIGWTT--SNSYLATDPLSTPLLVLTCWLLPLMILASQNHINSepisRQRLYIMLLTSLQTFLIMAFGATEIIMFY 120
Cdd:MTH00204 63 EWIISPTLNFqwGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFY 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 121 IMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGT---LSMLVIQYsqPLLLNSWGhkiwW 197
Cdd:MTH00204 139 ILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyQILLNIKL--PLSIQKWL----L 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 198 AGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFII-LALWGIIMTGSI 276
Cdd:MTH00204 213 VGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLT 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLT 356
Cdd:MTH00204 293 TCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLF 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 357 AVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPNHIMKLPPFHTREHL 436
Cdd:MTH00204 373 VIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELL 452
|
410
....*....|..
gi 333236315 437 LMALHLIPVILL 448
Cdd:MTH00204 453 AILPLIIAIFLL 464
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
42-412 |
7.00e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 229.55 E-value: 7.00e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 42 LNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILASQNHINSepisRQRLYIMLLTSLQTFLIMAFGATEIIMFYI 121
Cdd:MTH00217 61 FEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 122 MFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMlviQYSQPLLLNSWGHKIWWAGCL 201
Cdd:MTH00217 137 LFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 202 IAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFI-ILALWGIIMTGSICLRQ 280
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWW 360
Cdd:MTH00217 294 VDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILM 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 333236315 361 FTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMF 412
Cdd:MTH00217 374 LLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
4.08e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 216.41 E-value: 4.08e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLNSWG 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 193 HKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLA-NTAYERTHSRTMILARGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 333236315 352 IFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
23-410 |
9.09e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 211.70 E-value: 9.09e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 23 LWTTTTTHSLLIALISLSWLNWTSEIGWTTSNSYL--ATDPLSTPLLVLTCWLLPLMILASQNHINSepISRQRLYIMLL 100
Cdd:MTH00226 62 LWLSLDQEGGFTPLMDIDWIEGPEKIIPIIMGGPLvfAVDGISIYFIILTGFIVPCSILISWHSVKY--LTKSFLICMLI 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 101 tsLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVI 180
Cdd:MTH00226 140 --LEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 181 QYSQPLLLNSWGHKIWwAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVY 260
Cdd:MTH00226 218 ASCSHVVSEQTQKWIF-LGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 261 PFII-LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTH 339
Cdd:MTH00226 297 PAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHH 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 333236315 340 SRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLY 410
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
43-411 |
3.59e-54 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 188.70 E-value: 3.59e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 43 NWTSEIGWTTSnsyLATDPLSTPLLVLTCWLLPLMILASQNhINSEPisrqRLYIMLLTSLQTFLIMAFGATEIIMFYIM 122
Cdd:PRK12561 44 AWLPQIGLEWS---LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLM 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 123 FEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSQ---PLLLNSWGhkiwWAG 199
Cdd:PRK12561 116 WELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAksyPLALELLL----YAG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 200 CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLdpLSKELVYPFIILALWGI--IMTGSIC 277
Cdd:PRK12561 191 FLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQM--LPDAHVYFAPALAILGVvnIIYGALN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 278 -LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLT 356
Cdd:PRK12561 269 aFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKT 348
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 333236315 357 AVWWFTANLANLALPPLPNLMGELMI---ITTLFSWSPW----TIALTGAGTLITAGYSLYM 411
Cdd:PRK12561 349 FALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
57-416 |
1.40e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 166.48 E-value: 1.40e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 57 LATDPLSTPLLVLTCWLLPLMILASQNHINSEpiSRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAgCLIAFLVKMPLYGVHLW 216
Cdd:COG0651 150 GGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 217 LPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELV--YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
Cdd:COG0651 228 LPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFlgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 295 MGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLP 374
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 333236315 375 NLMGELMIITTLF-SWSPWTIALTGAGTLITAGYSLYMFLMSQ 416
Cdd:COG0651 388 GFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
43-455 |
8.66e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 161.03 E-value: 8.66e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 43 NWTSEIGWTTSnsyLATDPLSTPLLVLTCWLLPLMILASQnhinsePIS-RQRLYIMLLTSLQTFLIMAFGATEIIMFYI 121
Cdd:PRK02546 72 SWLPQLGLTWS---VGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 122 MFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLS--MLVI---QYSQPLLLnswghkIW 196
Cdd:PRK02546 143 AWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTfdMTALaakDFGLGFQL------LC 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 197 WAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYP-FIILALWGIIMTGS 275
Cdd:PRK02546 216 YAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAAL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPL 355
Cdd:PRK02546 296 TSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRK 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 356 TAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWT-------IALTGAGTLITAGYSLYMF---LMSQRGPTPNHIM 425
Cdd:PRK02546 376 MFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTlpfrvvvVFLAAVGVILTPIYLLSMLreiFFGPENKELVSHE 455
|
410 420 430
....*....|....*....|....*....|
gi 333236315 426 KLPPFHTREHLLMALHLIPVILLVTKPELM 455
Cdd:PRK02546 456 KLVDAEPREVFIIACLLVPIIGIGLYPKLV 485
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
97-410 |
3.73e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 156.61 E-value: 3.73e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 97 IMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLllqqstgtLS 176
Cdd:MTH00094 65 LILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KN 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 177 MLVIQYSQPLLLNSWGHKIWwagCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMldpLSK 256
Cdd:MTH00094 137 FFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS---LNF 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 257 ELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYE 336
Cdd:MTH00094 211 VYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYH 290
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 333236315 337 RTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLY 410
Cdd:MTH00094 291 ISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
42-458 |
7.80e-41 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 152.55 E-value: 7.80e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 42 LNWTSEIGWTTS---NSYLATDPLSTPLLVLTCWLLPLMILASqnhinSEPISRQRLYIMLLTSLQTFLIMAFGATEIIM 118
Cdd:PRK06473 57 QQFTEFIPWIDSlglSYHLGVDGLSLPLLVLNSLLTLIAIYSS-----DESIQRPRFYYSLLLLLNAGVSGAFLAQDLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 119 FYIMFEATLIPTLIIITRWGNQtERLNAGTYFLFYT-------LAGSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLnsw 191
Cdd:PRK06473 132 FFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTaisgiliLVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLL--- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 192 ghkiwWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFiiLALWGII 271
Cdd:PRK06473 208 -----LAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVV 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 272 --MTGSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARG 348
Cdd:PRK06473 281 svLYGASCaIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRG 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 349 L---QMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPNHIM 425
Cdd:PRK06473 361 LlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELS 440
|
410 420 430
....*....|....*....|....*....|...
gi 333236315 426 KLPPFHTREHLLMALHLIPVILLVTKPELMWGW 458
Cdd:PRK06473 441 NLPRVLWSERLPALVLAVLIVVLGIQPSWLVRW 473
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
3.69e-40 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 150.48 E-value: 3.69e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 57 LATDPLSTPLLVLTCWLLPLMILASQnhinsePISRQ-RLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLLL-----QQSTGTLSMLVIQySQPLLLnswgHKIWWAGCLIAFLVKMPL 210
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglygsNEPTLNFETLANQ-SYPVAL----EILFYIGFLIAYAVKLPI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 211 YGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPF-IILALWGIIMTGSICLRQTDLKSLIAY 289
Cdd:CHL00011 228 IPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 290 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERThsRTMILAR--GLQMIFPLTAVWWFTANLAN 367
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMAS 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 333236315 368 LALPPLPNLMGELMI---ITTLFSWSPWTIAL----TGAGTLITAGYSLYM 411
Cdd:CHL00011 386 LALPGMSGFVAELIVffgIITSQKYLLMPKILitfvMAIGMILTPIYLLSM 436
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
6.68e-32 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 117.63 E-value: 6.68e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 1 MLKVLIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 333236315 81 SQNHINSEPISRQRLYIMLLTSLQTFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-407 |
5.74e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.82 E-value: 5.74e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 41 WLNWTSEIGWTTSnsyLATDPLSTPLLVLTCWLLPLMILASqnhinSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLGLSYS---LGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 121 IMFEATLIPTLIIITRWGNQtERLNAGTYFLFYT-LAGSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLNSwgHKIWWAG 199
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTaVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNT--QLILLTG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 200 CLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPfiILALWGII--MTGS-I 276
Cdd:PRK07363 211 LLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMI---F 353
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgL 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 333236315 354 PLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGY 407
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-396 |
6.60e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 113.14 E-value: 6.60e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 5 LIPTIMLFPTIWLTSPKWLWTTTTTHSLLIALISLSWLNWTSEI------GWTTS-NSYLATDPLSTPLLVLTCWLLPLM 77
Cdd:PRK12667 19 LLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPivylfgGWPAPiGIVYEVDLLGALLGLLTALVMFLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 78 ILASQNHINSEpiSRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAG 157
Cdd:PRK12667 99 LIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 158 SLPLLVALLLLQQSTGTLSM-----LVIQYSQPLLLNSWGHKIWWAG-----CLIAFLVKMPLYGVHLWLPKAHVEAPVA 227
Cdd:PRK12667 177 TTLYFLALAFLYATFGTLNMadlsaKIRGLSFPLTGGLAGNPPLALGvalalALWAFTIKAAIFPNHFWLPDAHPAAPSP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 228 GSMVLAAVLLKLGGYGMMRMM-------IMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAG 300
Cdd:PRK12667 257 VSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFM 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 301 GILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGEL 380
Cdd:PRK12667 337 GIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKL 416
|
410
....*....|....*.
gi 333236315 381 MIITTLFSWSPWTIAL 396
Cdd:PRK12667 417 LLFNALLESGFYLPAL 432
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-448 |
7.73e-27 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 112.72 E-value: 7.73e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRM-MIMLDPLSKELVYP-FIILALWGIIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYyILIDAAIGSDFPGRlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAV 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 359 WWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLymFLMSQRgptpnHIMKLPPFHTREHLLM 438
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAAL--VRRVAG-----MVFGEPPEAVNRGDLG 453
|
250
....*....|
gi 333236315 439 ALHLIPVILL 448
Cdd:PRK06458 454 WLTTSPMFVH 463
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-407 |
1.89e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 105.73 E-value: 1.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 57 LATDPLSTPLLVLTCWLLPLMILASQnhinSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQ---YSQPLLLNSWGHkiwwagCLIAFLVKMPLYGV 213
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalAENPTVVTAFGF------VLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 214 HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMI----MLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAY 289
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 290 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLA 369
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
330 340 350
....*....|....*....|....*....|....*....
gi 333236315 370 LPPLPNLMGELMIITTLFS-WSPWTIALTGAGTLITAGY 407
Cdd:PRK08375 382 VPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-432 |
5.46e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 85.96 E-value: 5.46e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALwGIIMTGSIC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 278 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTA 357
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333236315 358 VWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTgAGTLITAGYSLYMFLMSQRGPTPNHIMKLPPFHT 432
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT 445
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
1.90e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 84.23 E-value: 1.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 91 SRQRLYIMLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQ 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 171 STGTLSMLVIQYSQPLllnswghkiwwAGCLIA--FLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMM 248
Cdd:PRK07234 170 ANGTFAFSGLATADPE-----------AFALIAlgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 249 IMLDPLSKELVYPFIILALWGIImtgsICLRQTDLKSLIAYSSVSHMGLVAGGILIqtpwgfsgAIILMIAHGLVSSMLF 328
Cdd:PRK07234 239 LDVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLF 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 329 CLANTAYERTHS--RTMILARGLQMifPLTavwwftanLANLALPPLPNLMG---ELMIITTLFSWSPWTIALTGAGTLI 403
Cdd:PRK07234 307 LCAGALPSRNFTelISQMLGIGKWI--PLT--------MASFSIAGFPLLAGfvsKVLTLKNLLPWQAIALNLAAVGTAA 376
|
.
gi 333236315 404 T 404
Cdd:PRK07234 377 S 377
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
202-387 |
2.15e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 81.70 E-value: 2.15e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 202 IAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmmIMLDPLSKELVYPFIIL------ALWGIIMTgs 275
Cdd:PRK08667 213 LGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 276 icLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSG-----------AIILMIAHGLVSSMLFCLANTAYERTHSRTMI 344
Cdd:PRK08667 289 --LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIE 366
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 333236315 345 LARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLF 387
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-388 |
3.60e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 3.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 111 FGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLaGSLPLLVALLLLQQSTGTLSMLVIqySQPLLLNS 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADI--SQGLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 191 WGHKIWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLdPLSKELV--------- 259
Cdd:PRK08668 191 STGFALIVFLFLlaFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvp 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 260 ---YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYE 336
Cdd:PRK08668 270 lfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 333236315 337 RTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFS 388
Cdd:PRK08668 350 RTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALIS 401
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-407 |
5.12e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 80.20 E-value: 5.12e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 76 LMILASQNHINSEPISRqrlYIMLltslqtFLIMAFGATEIIM------FYIMFEATLIpTLIIITRWGNQTERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDK---YAML------FLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 150 FLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQySQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGS 229
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIA-QLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPIT 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 230 MVLAAVLLKLGGYGMMRMMIMLDPLS--KELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTP 307
Cdd:PRK08377 242 VMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 308 WGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLF 387
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGL 401
|
330 340
....*....|....*....|.
gi 333236315 388 SWS-PWTIALTGAGTLITAGY 407
Cdd:PRK08377 402 SAGyTWPVALVLGASVVEAVY 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-453 |
1.68e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.45 E-value: 1.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 96 YIMLLTslqTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTL 175
Cdd:PRK12663 113 FILLLM---AGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 176 SMLVIQysqpLLLNSWGHK----IWWAGCLIAFLVKMPLYGVHlWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIML 251
Cdd:PRK12663 189 NMAHIA----MRLNDMGDTatltTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 252 DPLSKELVYPFIILALWGIIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCL 330
Cdd:PRK12663 264 FPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 331 ANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAGYSLY 410
Cdd:PRK12663 344 AGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLF 423
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 333236315 411 -MFLMSQRGPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPE 453
Cdd:PRK12663 424 rIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAE 467
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-410 |
2.33e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 78.09 E-value: 2.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 105 TFLI------MAFGATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSM- 177
Cdd:PRK12665 116 TYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMa 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 178 -LVIQYSQpllLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPlSK 256
Cdd:PRK12665 195 dLAVRLDE---LPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 257 ELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYE 336
Cdd:PRK12665 271 GLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIER 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 333236315 337 RTHSRTMILARGLQMIFPLTAVWWFTANLaNLA-LPPLPNLMGELMIITT-LFSWSPWTIALTgAGTLITAGYSLY 410
Cdd:PRK12665 351 QAGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALV-AGGVVTSLLTLY 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-460 |
2.15e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 71.69 E-value: 2.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 9 IMLFPTIWLTSPKWLWTTTTTHSLLIALISLsWLNWTSEIGWTTSNSYLAtDPLSTPLLVLTCWLLPLMILASQNHINSE 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALALL-LLALGGGTGTAFGGMFVV-DGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 89 PISRQRLYIMLLTSLQTFLIMAfGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGT-YFLFYTLAgSLPLLVALLL 167
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALS-SGFLLYGISL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 168 LQQSTGTLSMLVIqySQPLLLNSWGHKIWWAGC---LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM 244
Cdd:COG1007 176 LYGATGSLNLAGI--AAALAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 245 -MRMMIM-LDPLSKELVYPFIILALwgIIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:COG1007 253 lLRLLVEaFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAY 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 321 GLVSSMLF-CLANTAYERTHSRTMILARGLQMIFPLTAVwWFTANLANLA-LPPLPNLMGELMIITTLFSWSPWTIALTG 398
Cdd:COG1007 331 LFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLAL-AMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIA 409
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 333236315 399 A-GTLITAGYSL----YMFLmsqRGPTPNHIMKLPPFHTrehLLMALHLIPVILLVTKPELMWGWCY 460
Cdd:COG1007 410 VlNSVISAYYYLrvvkAMYF---DEPEEEAPISAPPGLR---VALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
198-402 |
7.85e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 70.00 E-value: 7.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 198 AGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSI 276
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIF 353
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 333236315 354 PLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTL 402
Cdd:PRK06525 370 PLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
4.75e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.02 E-value: 4.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMmimlDPLSKELVYPFIILALWG---IIMTGSICLRQTDLKSLIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 290 SSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 333236315 370 LPPLPNLMGELMIITTLFSWSPWTIALTGAGTL 402
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-404 |
9.40e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 67.04 E-value: 9.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 119 FYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYS---QPLLLNswghKI 195
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKmseNPTVVA----KI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 196 WWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLaaVLLKLGG-YGMMRMMIMLDPLSKELV---YPFIILALWGII 271
Cdd:PRK08376 222 ALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLAtvgWVIIILGCLTMF 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 272 MTGSICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWGF---SGAIILMIAHGLVSSMLFCLANTAYERTH 339
Cdd:PRK08376 300 VGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETG 379
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333236315 340 SRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLIT 404
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLT 444
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-429 |
1.28e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 66.71 E-value: 1.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMIMLDpLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 293 SHMGLVAGGILIQtpwGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 373 LPNLMGELMIITTLFSWSPWTIALTGAGTL---ITAGYSLYMFLM----SQRGPTPNHI------MKLPP 429
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLvffgKPRPKTPKHPhespwlMTLPL 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-373 |
2.15e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.22 E-value: 2.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSqplllNSWG 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHS-----DVWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 193 HKIWWAGcLIAFLVKMPLYG------VHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIML--DPLSKELVypfII 264
Cdd:PRK12650 202 EKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVWNWLL---II 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 265 LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMI 344
Cdd:PRK12650 278 VGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIR 357
|
250 260
....*....|....*....|....*....
gi 333236315 345 LARGLQMIFPLTAVWWFTANLANLALPPL 373
Cdd:PRK12650 358 RLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-373 |
4.41e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 61.83 E-value: 4.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 208 MPLygvHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSkELVYPFIILALWGIIMTGSI--CLRQTDLKS 285
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAP-GWWWGVLVLALGAISAVLGVlyALAEHDLKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 286 LIAYSSVSHMGLV-----------AGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFP 354
Cdd:PRK06521 303 LLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP 382
|
170
....*....|....*....
gi 333236315 355 LTAVWWFTANLANLALPPL 373
Cdd:PRK06521 383 WTAWAFLIGCLAISALPPL 401
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-388 |
9.67e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 60.35 E-value: 9.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFI-ILALWGIIMTGSICLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 280 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180
....*....|....*....|....*....
gi 333236315 360 WFTANLANLALPPLPNLMGELMIITTLFS 388
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTFE 404
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-409 |
1.13e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 60.61 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 76 LMILASQNHINSEPISRQRLYIMLLTSLQTFLIMAFGATEIIMFyIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTL 155
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 156 AGSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFL------VKMPLYgvhLWLPKAhVEAPVAGS 229
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVS 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 230 MVL-AAVLLKLGGYGMMRMmimlDPLSKELVYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVS---HMGLVAGGI 302
Cdd:PRK12649 249 AFLhSATMVKAGVYLVARI----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYT 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 303 LIQTP-WGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELM 381
Cdd:PRK12649 325 TYHEPgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
330 340 350
....*....|....*....|....*....|....*.
gi 333236315 382 IITTLFSWS-----PWTI---ALTGAGTLITAGYSL 409
Cdd:PRK12649 405 FYETSVEMGaliggPFTIiipAVAVLGGVFTFAYSI 440
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-440 |
1.26e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.22 E-value: 1.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLS--KELVYPF---IILALWGIIMTGS 275
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylQRIFAEFnwlIFIPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 276 ICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPL 355
Cdd:PRK06589 297 KALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 356 TAVWWFTANLANLALPPLPNLMGELMIITTLFS----WSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPNH---IMKLP 428
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSEnsfITKSL 456
|
250
....*....|..
gi 333236315 429 PFHTREHLLMAL 440
Cdd:PRK06589 457 PYLMQISVITCC 468
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
20-456 |
2.20e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 59.19 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 20 PKWLWTTTTTHSLLIALISLsWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCWLLPLMILASQNHINSEPISRQRLYIML 99
Cdd:TIGR01770 30 NPLLLKNLSYIVLLSALVSL-FLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYILL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 100 LTSLQTFLIMAFgATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLV 179
Cdd:TIGR01770 109 LFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFED 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 180 I-QYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMI-MLDPLSKE 257
Cdd:TIGR01770 188 LlLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEA 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 258 LVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLF-CLANT-AY 335
Cdd:TIGR01770 268 WQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSY 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 336 ERTHSRTMILARGLQMIFPLTAVwWFTANLANLA-LPPLPNLMGELMIITTLFSWSPWTIALTGA-GTLITAGYSL---- 409
Cdd:TIGR01770 348 KDEWIEYISDFAGLFKTNPILAI-LILIFMFSLAgIPPLAGFFGKFYVFFALLKSGLYWLAVIAVlTSVIGAFYYLrvvk 426
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 333236315 410 YMFLmsqrgPTPNHIMKLPPFHTREHLLMALHLIPVILLVTKPELMW 456
Cdd:TIGR01770 427 VMYF-----DKPERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
94-452 |
2.32e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 2.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 94 RLYIMLLTSLQTFLIMAFGATEIIMfYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTG 173
Cdd:PRK12646 111 RFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 174 TLSMLVIQYSQPLLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMIMLD 252
Cdd:PRK12646 190 TNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 253 pLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG----------FSGAIILM 317
Cdd:PRK12646 269 -LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvlFAALFHLM 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 318 iAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSP------ 391
Cdd:PRK12646 348 -NHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfsl 426
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333236315 392 -WTIALTGAG---TLITAGYSLYMFLMSQRGPTpnHIMKLPPFHTREHLLMALHliPVILLVTKP 452
Cdd:PRK12646 427 iSMIIIVFIGviaSIFTFTYALYMVKEVFWGKY--DSKVFTKKNIHEPWLFSLP--SLILMVLVP 487
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
31-345 |
2.44e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.17 E-value: 2.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 31 SLLIALISLSWLNWTSEIGWTTSNSYLATDPLSTPLLVLTCwllpLMILASQNHINSEPISRQRLYIMLltSLqTFLIMA 110
Cdd:MTH00062 15 LLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLVL----FLGLYSQVMFYNLLSGVSRFFLFL--SL-IFSILC 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 111 FGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSqplllNS 190
Cdd:MTH00062 88 FCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD-----DS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 191 WGHKIWWAGCLIaFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALWGI 270
Cdd:MTH00062 163 VSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFF 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 333236315 271 IMTGSICLrqtDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMIL 345
Cdd:MTH00062 242 LITACSEL---DGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-331 |
4.01e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.59 E-value: 4.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 172 TGTLSML-VIQYSQPLLLNswghKIWWAGCLIAFL---VKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRm 247
Cdd:PRK12662 187 TGTLNMGdMFLIIQDLPTN----RAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIR- 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 248 mIMLDPLSKELVYP-------FIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAH 320
Cdd:PRK12662 262 -IVYDVFKANFVFTtlpfnnvFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNH 340
|
170
....*....|.
gi 333236315 321 GLVSSMLFCLA 331
Cdd:PRK12662 341 SIVKSALFMVS 351
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
170-387 |
4.62e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 58.69 E-value: 4.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 170 QSTGTLSMLVI-QYSQPLLLNSwghKIWWAGcLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMM 248
Cdd:PRK08042 159 QRYGTLDLRLLdMRMQQLPLGS---DIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 249 IMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQTP----WGFSGAIILM 317
Cdd:PRK08042 235 LLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQPaliaLGLVGGLYHL 314
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 318 IAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLF 387
Cdd:PRK08042 315 LNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 384
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-439 |
2.78e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 53.10 E-value: 2.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 197 WAGCLIAFLVKM---------PLygvHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMmimlDPLSKELVY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM----YPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 261 PFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGFSGAIILMIAHGLVSSMLFCLANT-- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 334 -------AYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSP--WTIALTGAGtlIT 404
Cdd:PRK07376 365 hgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPalWFVGFLTAG--MT 442
|
250 260 270
....*....|....*....|....*....|....*
gi 333236315 405 AGYSLYMFLMSQRGPTPNHIMKLppfhtREHLLMA 439
Cdd:PRK07376 443 AFYMFRMYFLTFEGEFRGNDKEL-----QKELLAA 472
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-383 |
3.02e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 52.73 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 263 IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 333236315 343 MILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMII 383
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
201-324 |
3.08e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.43 E-value: 3.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM-MRMMIMLDPLSKELVYP-FIILALWGIIMTGSICL 278
Cdd:PRK05777 211 LVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVAFGGLSEDWQQvLAIIAIASMLVGNLAAL 289
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 333236315 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVS 324
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
201-410 |
5.28e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.15 E-value: 5.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMMIMLDPLSkELVYPFIILALWGIIMTGSICLR 279
Cdd:PRK12644 210 LVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFADVP-VWRPTVLVLGLATMLLGGWRALR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 280 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVw 359
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAV- 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 360 wfTANLANLALPPLPNLMG----ELMIIT-----TLFSWSPWTIALTGAGTLITAGYSLY 410
Cdd:PRK12644 367 --VAALAAASMAGLPPLLGfvakEAALEAvlhdgALGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-406 |
3.09e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.92 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEA--PVAGsmvLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALWGI----IMTG 274
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 275 SI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLAN-----------------TAYE 336
Cdd:PRK12666 294 AIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYD 373
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 337 RTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLITAG 406
Cdd:PRK12666 374 LDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWLWALVLLSG 443
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-415 |
3.43e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.57 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 201 LIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLlKLGgygMMRMMIMLDPLSkELVYPFIILALWGIIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVA---PLFLLSNFLDLY-WLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 281 TDLKSLIAYSSVSHMGLVAGGILiqtpWGFSGAIILMIAHGLVSSMLFCLANtaYERTHSRTMILARGLQMIFPLTAVWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLW--SGDSGSMKDLGSLKPSYKTGLSIISL 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 333236315 361 FtanLANLALPPLPNLMGELMIITTLFSWSPW-TIALTGAGTLITAGYSLYMFLMS 415
Cdd:MTH00144 240 L---LSLGGLPPFLGFCSKLLVLISSMESSPLlLILLLLLGSLISLFFYLSVFFSS 292
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-388 |
4.45e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.64 E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 57 LATDPLSTPLLVLTCWLLPLMILASQNHINSEP-ISRQRLYImlltSLQTFLIMAFGATE-IIMFYIMFEATLIPTLIII 134
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYL----SLFTFLMMVLVTSDnYLQLFIGWEGVGVCSYLLV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQ---YSQPLLLNSWGHKIW-------WAGCLIAF 204
Cdd:MTH00032 152 AFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAyesplapFAIIGILL 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 205 LV----KMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMimldPLSKELVYPFIILALWGII---MTGSIC 277
Cdd:MTH00032 232 LIgcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 278 LRQTDLKSLIAYSSVSHMGLVAggILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTH--SRTMILARGLQMIFPL 355
Cdd:MTH00032 308 LVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvdEQDMRKMGGLIHSIPF 385
|
330 340 350
....*....|....*....|....*....|...
gi 333236315 356 TAVWWFTANLANLALPPLPNLMGELMIITTLFS 388
Cdd:MTH00032 386 TYTMMLIGSFSIMGLPYLTGFYSKDLILELTYS 418
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
172-387 |
5.54e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.47 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 172 TGTLSMLVIQYSQPLLLNSWGhkiwwagcliaFLVKMPLYGVHL--WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmMI 249
Cdd:PRK06459 147 SGTTNFSYLPSPVPLILASFG-----------FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILK-MT 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 250 MLDPLSKELVYPFIILALWGI-IMTGSICLRQTD-LKSLIAYSSVSHMG--LVAGGILIQTPWGFS--------GAIILM 317
Cdd:PRK06459 215 ILTQTIPIGYFGLTILAIGAFsILFGALYAYVSEnVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYS 294
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 318 IAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIfpltAVWWFTANLAnlALPPLPNLMGELMIITTLF 387
Cdd:PRK06459 295 FAHSVAKTGLFLSSGLQEKQSITYSKKIRNRWIEL----GLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
1.43e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.05 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 214 HLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDpLSkelvyPFIILALWGI-----IMTGSICLRQTDLKSLIA 288
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-LS-----PVALTVLIVIgtvtaIGASLVAIAQIDIKRALS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 289 YSSVSHMGLVAGGILIQTPwgfSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANL 368
Cdd:PRK07390 314 YSTSAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
170 180
....*....|....*....|....*...
gi 333236315 369 ALPPLPNLMGELMIITTLFSWSPWTIAL 396
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-409 |
3.06e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.06 E-value: 3.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 212 GVHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMMIMLDPLSKELVYPFIILALwGIIMTGSICLRQTDLK 284
Cdd:MTH00020 228 GLHTWLPDA-MEGPTpvsalihAATMVTAGVFL------LIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLK 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 285 SLIAYSSVSHMG--LVAGGIliqtpWGFSGAIILMIAHGLVSSMLFCLANTA-YERTHSRTMILARGLQMIFPLTAVWWF 361
Cdd:MTH00020 300 KVIAYSTCSQLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFL 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 333236315 362 TANLANLALPPLP-----NLMGELMIITTLFSWSPWtiaLTGAGTLITAGYSL 409
Cdd:MTH00020 375 IGSLSLMGFPYLTgfyskDLILELAFGQYYLIFAYW---LGCFSALLTAFYSI 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
198-416 |
7.23e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.91 E-value: 7.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 198 AGCLIAF--LVKMPLYGVHLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRMMimldPLSKELVYPFIILALWGIIMT-- 273
Cdd:PRK08168 202 AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFA----PLLEQAPPARWLLVLVGLATAvl 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 274 -GSICLRQTDLKSLIAYSSVSHMGLvaggILIQTPWG-FSGAIILMIAHGLVSSMLFCLANTAYERTHSRTM-------- 343
Cdd:PRK08168 277 aGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLqgpqsaag 352
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 333236315 344 ---ILARGLQMIFPLTAV--WWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALTGAGTLitAGYSLYMFLMSQ 416
Cdd:PRK08168 353 vvsLLLAPLLSAALVLLLqsLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGLGLGLLLV--AGLTALAFLAHL 428
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-397 |
7.96e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.47 E-value: 7.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 112 GATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLAgSLPLLVALLLLQQSTGTLSMLVIQYSQPLLLNS 190
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALS-SGLFLFGCALLCGTTGGLHLSYINLVLNSGQSF 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 191 WGHKIWWAGCLI--AFLVKMPLYGVHLWLPKAHVEAPVagsmVLAAVLLKLGGYGMMRMMIMLDPLskelVYPFIILALW 268
Cdd:MTH00196 90 SSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPT----KTTALLAIVPKLGIFSILVSIGLN----VNILLIGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 269 GIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAyeRTHSRTMILARG 348
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILAL--NVYKNLIIEFSG 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 333236315 349 LQMIFPLTAVWWFTANLANLALPPLPNLMGELMIITTLFSWSPWTIALT 397
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLL 288
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
216-411 |
8.72e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.47 E-value: 8.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALwGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:MTH00209 197 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSL-TTLMASMSANVESDLKKIIALSTLSQL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 333236315 296 GLVAGGILIQTPwgfSGAIILMIAHGLVSSMLF-CLANTAYERTHSRTMILARGLQMIFPLTAVWWFTANLANLALPPLP 374
Cdd:MTH00209 276 GLMMCSLGLNQP---ELAFFHLITHALFKALLFiCAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLA 352
|
170 180 190
....*....|....*....|....*....|....*....
gi 333236315 375 NLMGELMIITTLF--SWSPWTIALTGAGTLITAGYSLYM 411
Cdd:MTH00209 353 GFYSKDLILESMLesNMPIMTLILMFLSTSLTAAYSMRL 391
|
|
| |
