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Conserved domains on  [gi|331746870|ref|YP_004425023|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Gomphocerus sibiricus tibetanus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 9.46e-41

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 130.67  E-value: 9.46e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   3 ILSTSILISFIVPMMVMLIATIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 331746870  83 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 9.46e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 130.67  E-value: 9.46e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   3 ILSTSILISFIVPMMVMLIATIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 331746870  83 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 4.21e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.21e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   19 MLIATIMSKKlINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKtSNIAMWTMSTTFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 331746870   99 VLLSGLYYEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.28e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.48  E-value: 1.28e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   8 ILISFIVPMMVMLIATIMSKKlINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNI- 86
Cdd:COG0838   12 LLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWf 90

                         90       100
                 ....*....|....*....|....*....
gi 331746870  87 AMWTMstTFFILVLLSGLYYEWNQGALQW 115
Cdd:COG0838   91 GLIEM--LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 9.46e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 130.67  E-value: 9.46e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   3 ILSTSILISFIVPMMVMLIATIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 331746870  83 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 2.59e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 119.58  E-value: 2.59e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   1 MLILSTSILISFIVPMMVMLIATIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 331746870  81 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.22e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 118.17  E-value: 1.22e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   1 MLILSTSILISFIVPMMVMLIATIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 331746870  81 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 4.38e-31

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 106.48  E-value: 4.38e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   1 MLILSTSILISFIVPMMVMLIATIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 331746870  81 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 116
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-117 2.28e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 96.93  E-value: 2.28e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   1 MLILSTSILISfivpMMVMLIATIMSKkLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00106   4 MLTLLTNTLLA----SLLVLIAFWLPQ-LNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 331746870  81 MKTSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWAD 117
Cdd:MTH00106  79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 16-117 2.20e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 94.60  E-value: 2.20e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870  16 MMVMLIATIMSKKLI----------NDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSN 85
Cdd:MTH00136   5 TTILTITIALSLILAivsfwlpqmtPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPS 84

                         90       100       110
                 ....*....|....*....|....*....|...
gi 331746870  86 IAMwTMSTTFFILVLLS-GLYYEWNQGALQWAD 117
Cdd:MTH00136  85 PLL-TFFWATAVLILLTlGLIYEWLQGGLEWAE 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 6-117 2.76e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 94.28  E-value: 2.76e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   6 TSILISFIVPMMVMLIATIMSKKLIN---DREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMK 82
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSrspDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 331746870  83 TSNIAMWTMSTTFFILVLLSGLYYEWNQGALQWAD 117
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 4-116 3.76e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 93.79  E-value: 3.76e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   4 LSTSILISFIVPMMVMLIATIMSKKLiNDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKT 83
Cdd:MTH00113   3 LISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 331746870  84 SNIAMWTMSTTFFILVLLSGLYYEWNQGALQWA 116
Cdd:MTH00113  82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-117 3.87e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 91.21  E-value: 3.87e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870  16 MMVMLIATIMSKKLIN----------DREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTsN 85
Cdd:MTH00069   3 MLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL-N 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 331746870  86 IAMWTMSTTFFILVLLS-GLYYEWNQGALQWAD 117
Cdd:MTH00069  82 TPTNTLFWSTLILILLTlGLIYEWIQGGLEWAE 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 4.13e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 91.11  E-value: 4.13e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   1 MLILSTSILISFIVPMMVMLIAtIMSKKLINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 331746870  81 MKTSNiaMWTMSTTFFILVLLSGLYYEWNQGALQW 115
Cdd:MTH00203  80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 4.21e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.21e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   19 MLIATIMSKKlINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKtSNIAMWTMSTTFFIL 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 331746870   99 VLLSGLYYEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 1.55e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 84.92  E-value: 1.55e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   8 ILISFIVPMMVMLIATIMSKKLiNDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILP-IVIIMKTSNI 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                         90       100       110
                 ....*....|....*....|....*....|
gi 331746870  87 AMWTMstTFFILVLLSGLYYEWNQGALQWA 116
Cdd:PRK06602  94 GFVEA--MIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.28e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.48  E-value: 1.28e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   8 ILISFIVPMMVMLIATIMSKKlINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNI- 86
Cdd:COG0838   12 LLVALGLALAMLLLSRLLGPK-RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWf 90

                         90       100
                 ....*....|....*....|....*....
gi 331746870  87 AMWTMstTFFILVLLSGLYYEWNQGALQW 115
Cdd:COG0838   91 GLIEM--LVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-115 9.98e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.40  E-value: 9.98e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   8 ILISFIVPMMVMLIATIMSKKlINDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILP-IVIIMKTSNI 86
Cdd:MTH00018   7 LIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwCVLYNQIAPF 85

                         90       100
                 ....*....|....*....|....*....
gi 331746870  87 AMWTMSTTFFILVLlsGLYYEWNQGALQW 115
Cdd:MTH00018  86 GFWTMVGFLFILTL--GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.48e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 69.35  E-value: 1.48e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870  32 DREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILP-IVIIMKTSNIAMWTMstTFFILVLLSGLYYEWNQ 110
Cdd:MTH00055  35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPwCVVYNQIGLFGFWVM--YLFLIILTIGLIYEWVK 112


                 ....*
gi 331746870 111 GALQW 115
Cdd:MTH00055 113 GGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 9.22e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 62.64  E-value: 9.22e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870  32 DREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNI-AMWTMSTtfFILVLLSGLYYEWNQ 110
Cdd:MTH00030  40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLfSFWIVYT--FLIVLAIGLAYEWIK 117


                 ....*
gi 331746870 111 GALQW 115
Cdd:MTH00030 118 GGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 8-115 5.43e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.99  E-value: 5.43e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   8 ILISFIVPMMVMLIATIMSKKLINDrEKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNIA 87
Cdd:CHL00022  14 LIISSLIPILAFLISGLLAPISKGP-EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVS 92

                         90       100
                 ....*....|....*....|....*...
gi 331746870  88 MWtMSTTFFILVLLSGLYYEWNQGALQW 115
Cdd:CHL00022  93 AF-IEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
9-115 1.02e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 46.97  E-value: 1.02e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   9 LISFIVPMMVMLIATIMSKKLIN---DREKSSPFEWGFDP-KSSARMpfSLRFFLIAVIFLIFDVEIALILPIVIIMKT- 83
Cdd:PRK08489  18 VLTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLl 95

                         90       100       110
                 ....*....|....*....|....*....|..
gi 331746870  84 SNIAMWTMstTFFILVLLSGLYYEWNQGALQW 115
Cdd:PRK08489  96 GLFGLIEM--LLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 1.24e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 46.66  E-value: 1.24e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870  32 DREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILP-IVIIMKTSNIAMWTMstTFFILVLLSGLYYEWNQ 110
Cdd:PRK07756  39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPwAVAYDKLGLFALIEM--LIFVVMLLVGLAYAWKK 116


                 ....*
gi 331746870 111 GALQW 115
Cdd:PRK07756 117 KVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.29e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 38.34  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870   1 MLILSTSILISFIVPMMVMLIATIMSKKLiNDREKSSPFEWGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 331746870  81 MKTSNIAMWtmsttFFILVLLSGLYYEWNQGALQW 115
Cdd:MTH00092  80 DFSSLISFF-----MLMIFIFFGFYMEWWYGKLIW 109
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 2.27e-04

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 37.73  E-value: 2.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746870  19 MLIATIMSKKLINdREKSSPFEWGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIALILPIVIIMKTSNI-AMWTMstTF 95
Cdd:PRK07928  22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVfGLVEM--AL 98

                         90       100
                 ....*....|....*....|
gi 331746870  96 FILVLLSGLYYEWNQGALQW 115
Cdd:PRK07928  99 FMLTVFVAYAYVWRRGGLEW 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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