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Conserved domains on  [gi|331746868|ref|YP_004425021|]
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ATP synthase F0 subunit 6 (mitochondrion) [Gomphocerus sibiricus tibetanus]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.18e-93

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 273.20  E-value: 1.18e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNiFYISMNWTTTFFGLLLIPPMFWLTSSPINIMWKKKNFSPHNEFKTLLGPKsFIGATFFFISTFIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  81 MLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTLSV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746868 161 RLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.18e-93

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 273.20  E-value: 1.18e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNiFYISMNWTTTFFGLLLIPPMFWLTSSPINIMWKKKNFSPHNEFKTLLGPKsFIGATFFFISTFIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  81 MLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTLSV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746868 161 RLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 6-225 4.83e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 144.66  E-value: 4.83e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868    6 FSTFDP-PTNIFYISMNWTTTFFGLLLIPPMF----WLTSSPINIMWKKKNFSPHNEFKTLLGPKSFIGATFFFiSTFIM 80
Cdd:TIGR01131   2 FSQFDIsPITLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   81 MLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTLSV 160
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 331746868  161 RLSANMIAGHLLLTLLGNTGAT-MSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 4.32e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 132.14  E-value: 4.32e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  73 FFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNI 152
Cdd:cd00310    7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868 153 IRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310   87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
58-222 2.67e-23

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 92.94  E-value: 2.67e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   58 FKTLLGPKSFIGATFFFISTFIMMLFNNFMGLF---PHIFSSTSHLTLTFTIAVPMWLSLMLFGGINH-TNHMFAHLVPQ 133
Cdd:pfam00119  45 VKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVP 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  134 GTPPPLMSFMVLIETISNIIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLII---GQMMLLILESAVAMIQA 210
Cdd:pfam00119 125 PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQA 204

                         170
                  ....*....|..
gi 331746868  211 YVFSILSTLYSS 222
Cdd:pfam00119 205 YVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 67-220 1.54e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 80.50  E-value: 1.54e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  67 FIGATFFFIstfimmLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINH-TNHMFAHLVPQGTPPpLMSFMVL 145
Cdd:COG0356   60 LLLTLFLFI------LVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLP 132

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746868 146 IETISNIIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISmlIIGQMMLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356  133 IEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.18e-93

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 273.20  E-value: 1.18e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNiFYISMNWTTTFFGLLLIPPMFWLTSSPINIMWKKKNFSPHNEFKTLLGPKsFIGATFFFISTFIM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  81 MLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTLSV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746868 161 RLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 3.37e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 157.89  E-value: 3.37e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNIFY--ISMNWTTTFFGLLLIPPMFWLTSSPINIMWKK-KNFSPhnEFKTLLGPKSFIGATFFFIST 77
Cdd:MTH00176   1 MLVDLFSSFDPPNKNIFsmISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMfSTFLP--EMILRSNGSYILGSASIIISL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  78 FIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGT 157
Cdd:MTH00176  79 FILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLT 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331746868 158 LSVRLSANMIAGHLLLTLLGNTGA---TMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:MTH00176 159 LAVRLAANLSAGHLLLGLLGAAMWgllPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 6-225 4.83e-43

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 144.66  E-value: 4.83e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868    6 FSTFDP-PTNIFYISMNWTTTFFGLLLIPPMF----WLTSSPINIMWKKKNFSPHNEFKTLLGPKSFIGATFFFiSTFIM 80
Cdd:TIGR01131   2 FSQFDIsPITLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   81 MLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTLSV 160
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 331746868  161 RLSANMIAGHLLLTLLGNTGAT-MSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSEVY 225
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSlMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-222 4.32e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 132.14  E-value: 4.32e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  73 FFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNI 152
Cdd:cd00310    7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868 153 IRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSS 222
Cdd:cd00310   87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 6.42e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 129.08  E-value: 6.42e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNIFYISMN----WTTTFFGLLLIPPMFWLTSSPINIMWKKKNFSPHNEFKTLLGpKSFIGATFFFIS 76
Cdd:MTH00005   1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  77 TFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPG 156
Cdd:MTH00005  80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868 157 TLSVRLSANMIAGHLLLTLLGNTGATM---STNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 1.89e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 122.63  E-value: 1.89e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTnIFYISMNWTTTFFGLLLIPPM--FWLTSSPINIM-WKKKNFSphnefKTLLGPKSFIGA--TFFFI 75
Cdd:MTH00120   1 MNLNFFDQFSSPE-LLGIPLILLAMLIPALLIPSPknRLLTNRLTTLQlWLIKLIT-----KQLMLPLNKKGHkwALILT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  76 STFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRP 155
Cdd:MTH00120  75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331746868 156 GTLSVRLSANMIAGHLLLTLLGN-TGATMSTN-LISMLIIGQMMLL-ILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00120 155 LALGVRLTANLTAGHLLIQLISTaTLNLLPTMpTLSLLTLIILLLLtILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-223 4.60e-34

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 121.62  E-value: 4.60e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   2 MTNFFSTFDP--PTNIFYISMNWTTTFFGL---LLIPPMFWLtSSPINIMWKKKNFSPHNEFKTLLGPKSFIGATFFFiS 76
Cdd:MTH00035   1 MIINNSIFGQfsPDTILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-T 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  77 TFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPG 156
Cdd:MTH00035  79 VFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPI 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 331746868 157 TLSVRLSANMIAGHLLLTLLGNTGATMSTNLI--SMLIIGQMMLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00035 159 ALGLRLAANLTAGHLLIFLLSTAIWELSNSPLisIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 6.25e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 121.13  E-value: 6.25e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNIFYI--SMNWTTTFFGLLLIPPMFWLTSSPINIMWKKKNFSPHNEFKTLLGpKSFIGATFFFISTF 78
Cdd:MTH00173   1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  79 IMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTL 158
Cdd:MTH00173  80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 331746868 159 SVRLSANMIAGHLLLTLLGN--TGATMSTNLISMLI--IGQMMLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNylSSSLFSSSVVSLLLvlLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 3.90e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 118.90  E-value: 3.90e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTNIFYISMNWTTTFFGLLLIPPMFWLTSSPINI--MWKKKNFSphNEFKTLLGPKSFIGATFFFiSTF 78
Cdd:MTH00179   1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTlqSWFFGSFT--FQLMQPINKKGHKWAVLFL-SLM 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  79 IMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRPGTL 158
Cdd:MTH00179  78 LFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLAL 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 331746868 159 SVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQ---MMLLILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00179 158 GVRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 3.16e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 116.60  E-value: 3.16e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   1 MMTNFFSTFDPPTnIFYISMNWTTTFFGLLLIPPMF--WLTSSPINI-MWKKKNFSphnefKTLLGPKSFIGATFFFIST 77
Cdd:MTH00073   1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFPTPTnkWLNNRLSTLqIWFLQNFT-----KQLMLPLNTPGHKWALILT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  78 FIMM--LFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNIIRP 155
Cdd:MTH00073  75 SLMVflITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRP 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 331746868 156 GTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLL---ILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00073 155 LALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 74-223 7.03e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 110.73  E-value: 7.03e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  74 FISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNII 153
Cdd:MTH00132  73 LTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFI 152

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 331746868 154 RPGTLSVRLSANMIAGHLLLTLLGnTGATMSTNLISMLIIGQMMLL----ILESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00132 153 RPLALGVRLTANLTAGHLLIQLIA-TAAFVLLPLMPTVAILTATLLflltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-220 1.70e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 106.96  E-value: 1.70e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  71 TFFFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETIS 150
Cdd:MTH00101  69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 331746868 151 NIIRPGTLSVRLSANMIAGHLLLTLLGN-TGATMSTNLISMLI--IGQMMLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00101 149 LFIQPMALAVRLTANITAGHLLIHLIGGaTLALMSISTTTALItfIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
58-222 2.67e-23

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 92.94  E-value: 2.67e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868   58 FKTLLGPKSFIGATFFFISTFIMMLFNNFMGLF---PHIFSSTSHLTLTFTIAVPMWLSLMLFGGINH-TNHMFAHLVPQ 133
Cdd:pfam00119  45 VKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVP 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  134 GTPPPLMSFMVLIETISNIIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLII---GQMMLLILESAVAMIQA 210
Cdd:pfam00119 125 PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQA 204

                         170
                  ....*....|..
gi 331746868  211 YVFSILSTLYSS 222
Cdd:pfam00119 205 YVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 72-220 1.55e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 88.91  E-value: 1.55e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  72 FFFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISN 151
Cdd:MTH00175  84 PFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSY 163

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 331746868 152 IIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLI----LESAVAMIQAYVFSILSTLY 220
Cdd:MTH00175 164 LIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 73-220 5.75e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 87.40  E-value: 5.75e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  73 FFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNI 152
Cdd:MTH00172  74 FIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYI 153

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 331746868 153 IRPGTLSVRLSANMIAGHLLLTLLGNTGATMST-----NLISMLIIgqMMLLILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00172 154 SRAISLGVRLAANLSAGHLLFAILAGFGFNMLCasgflSLFPLLIM--VFITLLEIAVAVIQAYVFCLLTTIY 224
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 67-220 1.54e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 80.50  E-value: 1.54e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  67 FIGATFFFIstfimmLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINH-TNHMFAHLVPQGTPPpLMSFMVL 145
Cdd:COG0356   60 LLLTLFLFI------LVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLP 132

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 331746868 146 IETISNIIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISmlIIGQMMLLILESAVAMIQAYVFSILSTLY 220
Cdd:COG0356  133 IEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 6.09e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 73.68  E-value: 6.09e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  73 FFISTFIMMLFNNFMGLFP-HIFSSTSHLTLTFTIAVPMWLSLMLFGGINH-TNHMFAHLVPQGTPpplmsFMVLIETIS 150
Cdd:PRK05815  75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKgLGGYLKEFYLQPHP-----LLLPIEIIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868 151 NIIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGqMMLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 73-220 1.46e-14

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 70.35  E-value: 1.46e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  73 FFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISNI 152
Cdd:MTH00174  93 FVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYI 172

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 331746868 153 IRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLL----ILESAVAMIQAYVFSILSTLY 220
Cdd:MTH00174 173 SRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-220 9.84e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 60.14  E-value: 9.84e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  73 FFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMW-------LSLMLFGGinhtnhMFAHLVpQGTPPPLMSFMVL 145
Cdd:PRK13419 173 YLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFfitqyaaIKAHGIKG------YLAHLT-GGTHWSLWIIMIP 245

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 331746868 146 IETISNIIRPGTLSVRLSANMIAGHLLLTLLGNTGATMSTNLISMLIIGQMMLLI--LESAVAMIQAYVFSILSTLY 220
Cdd:PRK13419 246 IEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIylLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 26-223 1.72e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 52.67  E-value: 1.72e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  26 FFGLLLIPPMFWLTSSPINIMWKKKNFSPHNEFKTLlgpKSFIGATFFFISTFIMMLFNNFMGLFPHIFSSTSHLTLTFT 105
Cdd:MTH00087  10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868 106 IAVPMWLSLMLFggINHTNHMFAHLVPQGTPPPLMSF-MVLIETISNIIRPGTLSVRLSANMIAGHLLLTLLGntgaTMS 184
Cdd:MTH00087  87 YALVAWLSTFLS--FLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLN----FLG 160

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 331746868 185 TNLISMLIIGQMMllilESAVAMIQAYVFSILSTLYSSE 223
Cdd:MTH00087 161 EKYVWLSILAIMM----ECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 97-220 3.84e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 49.89  E-value: 3.84e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  97 TSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETI-SNIIRPGTLSVRLSANMIAGHLLLT- 174
Cdd:PRK13417 219 TGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILa 298

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 331746868 175 LLGNTGATMSTNLISMLIIGQMMLLILESAVAMIQAYVFSILSTLY 220
Cdd:PRK13417 299 LMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 72-161 8.94e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 41.41  E-value: 8.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  72 FFFISTFIMMLFnnFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFGGINHTNHMFAHLVPQGTPPPLMSFMVLIETISN 151
Cdd:MTH00050  26 YSVVLFIVLFLF--LLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISY 103

                         90
                 ....*....|
gi 331746868 152 IIRPGTLSVR 161
Cdd:MTH00050 104 IIRPVVLILR 113
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 69-220 1.71e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 38.18  E-value: 1.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868  69 GATFFFISTF-IMMLFNNFMGLFPHIFSSTSHLTLTFTIAVPMWLSLMLFG----GInhTNHMFAHLVPQgtpPPLMSFM 143
Cdd:PRK13420  72 RLVLPFVGTLwIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGiraeGL--REYLKHYLSPS---PFLLPFH 146

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 331746868 144 VlietISNIIRPGTLSVRLSANMIaghllltllgntgaTMSTNLISMLIIGQMM----LLILESAVAMIQAYVFSILSTL 219
Cdd:PRK13420 147 L----ISEITRTLALAVRLFGNIM--------------SLELAALLVLLVAGFLvpvpILMLHIIEALVQAYIFGMLALI 208


                 .
gi 331746868 220 Y 220
Cdd:PRK13420 209 Y 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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