|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.14e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 430.01 E-value: 1.14e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 1 MSPLTKLTLTLSLTLGTTTTITSSHWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 81 SGQWDITQLTNPPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLLTILAVM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 241 NAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLPPNSPNKMKQWSTKKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 327199769 321 INTLTPVLTLLSLSLLPLSPMILTTT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
25-324 |
1.09e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 361.81 E-value: 1.09e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSCILLTTAIAI 104
Cdd:MTH00135 25 HWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPTTMITLALAL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 105 KLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPItILLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:MTH00135 105 KIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLTSTLVGGWGGLNQTQLRKILAYSSI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 185 SHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKW 264
Cdd:MTH00135 184 AHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKW 263
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 265 LIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLPPNSPNKMKQWSTKKPINTL 324
Cdd:MTH00135 264 LILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
25-325 |
2.90e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 353.07 E-value: 2.90e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSCILLTTAIAI 104
Cdd:MTH00070 25 HWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTPLPTIMLTIALMM 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 105 KLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:MTH00070 105 KLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 185 SHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKW 264
Cdd:MTH00070 185 AHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKW 264
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 327199769 265 LIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLPPNSPNKMKQWSTKKPINTLT 325
Cdd:MTH00070 265 LILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNLL 325
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
6.79e-109 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 321.41 E-value: 6.79e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 1 MSPLTKLTLTLSLTLGTTTTITSSHWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 81 SGQWDITQLTNPPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLLTILAVM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 241 NAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLPPNSPN-KMK-QWSTK 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKwQFENT 320
|
....*.
gi 327199769 319 KPINTL 324
Cdd:MTH00105 321 KPMTLL 326
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.04e-90 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 275.31 E-value: 1.04e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 1 MSPLTKLTLTLSLTLGTTTTITSSHWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 81 SGQWDITQLTNPPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLLTILAVM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 241 NAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLPPNSPNKMKQWSTKKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....
gi 327199769 321 INTL 324
Cdd:MTH00200 321 SNLL 324
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
25-307 |
7.30e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 255.24 E-value: 7.30e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSCILLTTAIAI 104
Cdd:MTH00041 25 HWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLSSIIITLALAL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 105 KLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:MTH00041 105 KLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 185 SHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKW 264
Cdd:MTH00041 185 AHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKF 264
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 327199769 265 LIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLPPN 307
Cdd:MTH00041 265 ISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
26-343 |
9.03e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 190.03 E-value: 9.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 26 WVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGqwditqLTNPPSCILLTTAIAIK 105
Cdd:MTH00160 27 WFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM------LFNNISSMLINSSLLLK 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 106 LGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILlltSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00160 101 LGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSIN 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 186 HLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:MTH00160 178 HLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWI 257
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 327199769 266 IIQELTKQEMTTTATTISMLSLLGLFFYLRLAYcSTITLPPNSPNKMKQWSTKKPINTLTPVLTLLSLSLLPLSPMIL 343
Cdd:MTH00160 258 IIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
25-324 |
2.97e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 170.45 E-value: 2.97e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITqltnppscILLTTAIAI 104
Cdd:MTH00144 25 HWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM--------SLLLLGLCL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 105 KLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPI-TILLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSS 183
Cdd:MTH00144 97 KLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSS 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 184 ISHLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTlMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPK 263
Cdd:MTH00144 177 ISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSK 255
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 327199769 264 WLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLpPNSPNKMKQWSTKKPINTL 324
Cdd:MTH00144 256 LLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS-SKSKKSNSSKVLNSSIISL 315
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
26-305 |
3.71e-44 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 154.55 E-value: 3.71e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 26 WVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSmtnawsSGQWDITQLTNPPSCILLTTAIAIK 105
Cdd:MTH00011 28 WLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLKNITALMLLVSLMLK 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 106 LGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00011 102 LGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 186 HLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:MTH00011 182 HMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLM 261
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 327199769 266 IIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTITLP 305
Cdd:MTH00011 262 AIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSP 301
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
26-302 |
2.78e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.04 E-value: 2.78e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 26 WVMAWIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSgqwditqLTNPPSCILLTTAIAIK 105
Cdd:MTH00197 20 WFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YLSLLSVVLVILGLLLK 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 106 LGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHslNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00197 93 LGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 186 HLGWMTIIIVYNPKLTLLTFYLYTLMTASIFLSMNSINILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:MTH00197 171 HTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWL 250
|
250 260 270
....*....|....*....|....*....|....*..
gi 327199769 266 IIQELTKQEMTTTATTISMLSLLGLFFYLRLAYCSTI 302
Cdd:MTH00197 251 ILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
25-298 |
1.72e-34 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 131.78 E-value: 1.72e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLIS-KSHHPRATEAATKYFLVQATASTLMLF--------------SSMTNAWSSGQWDITQL 89
Cdd:COG1007 123 DLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAALAAGGANSPLL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 90 TnpPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKL----PPITILLLTSHSLNP---TLLTILAVMSI 162
Cdd:COG1007 203 L--LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqLLLAVLAVLSM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 163 ALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTL--LTFYL--YTLMTASIFLSMNSI--------NILKLSTL 230
Cdd:COG1007 281 TVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLsrkggeaeEIEDLAGL 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 327199769 231 mtsWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAY 298
Cdd:COG1007 361 ---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
25-268 |
7.69e-30 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 115.49 E-value: 7.69e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLI-SKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSC-------- 95
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGglnssgll 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 96 ---ILLTTAIAIKLGLTPFHFWFPEVLQGSSL-ITALLLSTAMKLPPITILLLTS--HSLNPT---LLTILAVMSIALGG 166
Cdd:pfam00361 83 llfLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 167 WMGLNQTQTRKILAFSSISHLGWMTIII----VYNPKLTLLTFYLYTLMTASIFLSMNSI--------NILKLSTLmtsW 234
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvhtrNIRDYGGL---A 239
|
250 260 270
....*....|....*....|....*....|....
gi 327199769 235 TKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
26-296 |
7.67e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 114.36 E-value: 7.67e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 26 WVMAWIGLEINTLAMIPLI-SKSHHPRATEAATKYFLVQATASTLMLFS-------------SMTNAWSSGQWDITQLTN 91
Cdd:MTH00196 15 WLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVLNSGQSFSSVSV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 92 PPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLltSHSLNPTLLTILAVMSIALGGWMGLN 171
Cdd:MTH00196 95 PIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLFSLFVGAIGALN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 172 QTQTRKILAFSSISHLGWMTIIIVYNP----KLTLLTFYLYTLMTASIFLSMNSIN-----ILKLSTLMTswtKTPMLNA 242
Cdd:MTH00196 173 QTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNvyknlIIEFSGLSR---RLPILAI 249
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 327199769 243 VLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRL 296
Cdd:MTH00196 250 TLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
25-296 |
1.62e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 114.92 E-value: 1.62e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLIS-KSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPS--------- 94
Cdd:PRK05777 124 DLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALAdgsgnslll 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 95 ---CILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILL-------LTSHSLNPTLLTILAVMSIAL 164
Cdd:PRK05777 204 lfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvvafGGLSEDWQQVLAIIAIASMLV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 165 GGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTL--LTFYL--YTLMTASIF--LSM------NSINILKLSTLmt 232
Cdd:PRK05777 284 GNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLlrrkggEAESISDFAGL-- 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327199769 233 SWTKtPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRL 296
Cdd:PRK05777 362 SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
25-297 |
3.51e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.50 E-value: 3.51e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLIS-KSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSC-------- 95
Cdd:TIGR01770 123 DLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNgmlnisll 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 96 ----ILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILL-------LTSHSLNPTLLTILAVMSIAL 164
Cdd:TIGR01770 203 llgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIFLAIIAFLSMLI 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 165 GGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTL--LTFYL--YTLMTASIF---LSMNSIN---ILKLSTLMTSW 234
Cdd:TIGR01770 283 GNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFgvlSLLRSYKdewIEYISDFAGLF 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 327199769 235 TKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLA 297
Cdd:TIGR01770 363 KTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
26-267 |
9.46e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 104.33 E-value: 9.46e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 26 WVMAWIGLEINTLAMIPLIS-KSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDI----TQLTNPPSCILLTT 100
Cdd:MTH00199 119 WLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSILTGDVGKILITI 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 101 AIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPTLltILAVMSIALGGWMGLNQTQTRKILA 180
Cdd:MTH00199 199 SLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVL--ICAVLSIIYGAIGALNQTKIKRLLA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 181 FSSISHLGWMTIIIVYNP----KLTLLTFYLYTLMTASIFLSMNSIN-----ILKLSTLMTswtKTPMLNAVLMLTLLSL 251
Cdd:MTH00199 277 YSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKltkglIVEVSGLSR---KNPVIALTLALTFLSI 353
|
250
....*....|....*.
gi 327199769 252 AGLPPLTGFLPKWLII 267
Cdd:MTH00199 354 AGIPPLAGFLSKWLIL 369
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-296 |
4.87e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.98 E-value: 4.87e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 30 WIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQL------TNPP----SCILLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGlllaAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 100 TAIAIKLGLTPFHFWFPEVL-QGSSLITALLLSTAMKLPPITIL----LLTSHSLNP---TLLTILAVMSIALGGWMGLN 171
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVYAILrvltLLFGADPALflgTLLLVLGLLTMLVGALGALA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 172 QTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLY----TLMTASIFLSMNSI-------NILKLSTLmtsWTKTPML 240
Cdd:COG0651 293 QRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAAGAIeratgtrDLDKLGGL---GKRMPLT 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 327199769 241 NAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRL 296
Cdd:COG0651 370 AAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
9.90e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 86.98 E-value: 9.90e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 51 RATEAATKYFLVQATASTLMLFS-SMTNAWSSGQWDI---------TQLTNPPSC----ILLTTAIAIKLGLTPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 117 EVLQGS-----------SLITALLLSTAMklppITILLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:CHL00049 239 DVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 186 HLGWMTI-IIVYNPK------LTLLTFYLY----TLMTASIF-LSMNSINILKLSTLmtsWTKTPMLNAVLMLTLLSLAG 253
Cdd:CHL00049 315 QIGYVIIgIIVGDSNdgyasmITYMLFYIFmnlgTFACIVLFgLRTGTDNIRDYAGL---YTKDPFLALSLALCLLSLGG 391
|
250
....*....|
gi 327199769 254 LPPLTGFLPK 263
Cdd:CHL00049 392 IPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.39e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 81.64 E-value: 5.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 50 PRATEAATKYFLVQATASTLMLF-SSMTNAWSSGQWDIT----QLTNPPSCILLTT------AIAIKLGLTPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSaialALITSPSLGLALAlvfviaGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 119 LQGSSLITALLLSTAMKLPPITI---LLLTSHSLNPT----LLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLGWMT 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 192 IIIVYNPKLTLLTFYLYtlMTASIFLSMNSINILKLSTLMTS----------WTKTPMLNAVLMLTLLSLAGLPPLTGFL 261
Cdd:PRK02504 317 IGLVAGTEAGYASMVFY--LLAYLFMNLGAFACVILFSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 327199769 262 PK 263
Cdd:PRK02504 395 GK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.21e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 80.69 E-value: 1.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 33 LEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFS-SMTNAwSSGQWDITQLTN--PPSCILLT------TAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 104 IKLGLTPFHFWFPEVLQG-SSLITALLLSTAMKLPPITILLLTSH------SLNPTLLTILAV---MSIALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfRFALGLGWLLAVlalLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 174 QTRKILAFSSISHLGWMTIIIVYNPKLTLL--TFYL--YTLMTASIFLSMNSI-------NILKLSTLMTswtKTPMLNA 242
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIevtygtrRLSELSGLGR---RMPLTAA 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 327199769 243 VLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAY 298
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
25-296 |
5.65e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 75.67 E-value: 5.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 25 HWVMAWIGLEINTLAMIPLISKSHHPRAT---------EAATKYFLVQATASTLMLF-----------SSMTNAWSSGQW 84
Cdd:MTH00198 209 NWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFgcalyfgftgnEGMLGTILSATL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 85 DITQL---TNPPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLppITILLLTSHSLNPTLLTILAVMS 161
Cdd:MTH00198 289 ETTNIelrQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITSKLLLSVAIIS 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 162 IALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTLM-TASIFLSMNSINIL--------------- 225
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALASFTVICTLeefgtrtptsrqrdg 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 226 ---------KLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGL------ 290
Cdd:MTH00198 447 sfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIictcis 526
|
....*..
gi 327199769 291 -FFYLRL 296
Cdd:MTH00198 527 aFYYIRI 533
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
27-270 |
4.26e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 70.18 E-value: 4.26e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 27 VMAWIGLEINTLAMIPLISKSHH-PRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSCIL---LTTAI 102
Cdd:COG1009 134 LLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILsspLLTLI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 103 AI--------KLGLTPFHFWFPEVLQGSSLITALLLSTAM---------KLPPItiLLLTSHSLnpTLLTILAVMSIALG 165
Cdd:COG1009 214 LLllllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPL--FALSPVWL--TVVAIIGAITALFA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 166 GWMGLNQTQTRKILAFSSISHLGWMTIIIVynpkLTLLTFYLYTLMT-----ASIFLS-------MNSINILKLSTLmts 233
Cdd:COG1009 290 ALIALAQTDIKRVLAYSTVSQLGYMFLALG----VGAYVAALFHLLThaffkALLFLGagsvihaTGTRDIRKMGGL--- 362
|
250 260 270
....*....|....*....|....*....|....*..
gi 327199769 234 WTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:COG1009 363 RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-267 |
4.47e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 69.72 E-value: 4.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 49 HPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQW--DITQLTN---PPS-----CILLTTAIAIKLGLTPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 119 L-QGSSLITALLLSTAMKLP-------PITILLLTSHSLNPTLLtILAVMSIALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKMGgygllrfALPLFPEASAYFAPLLA-ALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 191 TI-IIVYNPK-LTLLTFYL--YTLMTASIFLS-------MNSINILKLSTLmtsWTKTPMLNAVLMLTLLSLAGLPPLTG 259
Cdd:COG1008 315 LLgIFALNPLgLQGAVLQMvsHGLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAALFLLAALASLGLPGTSG 391
|
....*...
gi 327199769 260 FLPKWLII 267
Cdd:COG1008 392 FVGEFLVL 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
3.79e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 67.26 E-value: 3.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 80 SSGQWDITQL-TNPPSCILLTTAIAI-------KLGLTPFHFWFPEVLQGSSLITALLLSTAM---------KLPPItil 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 143 LLTSHSLNPTLLtILAVMSIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPK------LTLLTfyLYTLMTASIF 216
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALF 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 327199769 217 LSMNSI-------NILKLSTLmtsWTKTPMLNAVLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 337 LVVGIIdhstgtrDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-268 |
3.81e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 66.89 E-value: 3.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 55 AATKYFLVQATASTLMLFSSMTNAWSSGQ-WDITQLTNPPSCILLTT--------AIAIKLGLTPFHFWFPEV-LQGSSL 124
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhVEAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 125 ITALLLSTAMKLPPITILLL-------TSHSLNPtLLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYN 197
Cdd:TIGR01972 237 GSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 198 PKLTLL--TFYLYT--LMTASIFL-------SMNSINILKLSTLmtsWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:TIGR01972 316 NELGISgaVFQMIShgLITAALFLlvgvlyeRAHTRDIAKYGGL---ANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI 392
|
..
gi 327199769 267 IQ 268
Cdd:TIGR01972 393 LL 394
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
4.27e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.96 E-value: 4.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 33 LEINTLAMIPLIS-KSHHPRATEAATKYFLVQATASTLMLFS---------SMTNAWSSGQWDIT-QLTNPPSCILLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENpTVVAKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 102 IAIKLGLTPFHFWFPEVL-QGSSLITALLL-STAMKLPPITILLLT--SHSLNPT----LLTILAVMSIALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYpAAPSSISAMLLvIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 174 QTRKILAFSSISHLGWMTI-----IIVYNPklTLLTFYLYTLMTASIFLSMNSI--------------------NILKLS 228
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHAlykallfltagaviyetgtrNLNELG 387
|
250 260 270
....*....|....*....|....*....|....*...
gi 327199769 229 TLMTSWTKTPMLnavLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 388 GLARTMPKTTIA---FLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
3.94e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 60.74 E-value: 3.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 33 LEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSCI--LLTTAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAfaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 111 FHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPT--LLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 189 WmtiiIVYNPKLTLLTFYLYTLMTASIFLSMNSINilklSTLMTSWTKTPMLNAV-LMLTL--LSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLCAGALP----SRNFTELISQMLGIGKwIPLTMasFSIAGFPLLAGFVSKVL 354
|
....*.
gi 327199769 266 IIQELT 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
27-263 |
2.67e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.52 E-value: 2.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 27 VMAWIGLEINTLAMIPLISKSHhPRATEAATKYFLVQAtASTLMLFSSMtnAWSSGQWDITQLtnppSCIL--------- 97
Cdd:PRK12650 133 VVLFVAWELVSLASFFLIARSG-SGGEAGSIRTLILTF-FGGLTLLAAV--AIAATQTGTTSL----SGILhsdvwaekp 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 98 -LTTAIAIKLGLT--------PFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTS--HSLNPT---LLTILAVMSIA 163
Cdd:PRK12650 205 gLTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITAL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 164 LGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYT----LMTASIFLSMNSIN----ILKLSTLMTSWT 235
Cdd:PRK12650 285 MGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIGVVDhqagTRDIRRLGSLWR 364
|
250 260
....*....|....*....|....*...
gi 327199769 236 KTPMLNAVLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 365 RMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
2.83e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 58.39 E-value: 2.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 110 PFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPT-----LLTILAVMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 185 SHLGWMTIIIVYNPKLTLLTFYLY----TLMTASIFLSMNSIN-------ILKLSTLmtsWTKTPMLNAVLMLTLLSLAG 253
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAALSMAG 369
|
170
....*....|...
gi 327199769 254 LPPLTGFLPKWLI 266
Cdd:PRK12647 370 LPPLFGFLAKELI 382
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-267 |
5.79e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 57.13 E-value: 5.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 55 AATKYFLVQATASTLMLFSSMT----NAWSSGQWDITQLTNPPS----------CILLttAIAIKLGLTPFHFWFPEVLQ 120
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLppgvqywlflAFFI--AFAVKMPMFPLHTWLPDAHV 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 121 -----GSSLITALLLSTA------MKLPpitILLLTSHSLNPtLLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:PRK05846 240 qaptaGSVLLAGILLKMGaygllrFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 190 MTI-IIVYNPK-LTLLTFYL--YTLMTASIFLSMNSInILKLSTLMTS-----WTKTPMLNAVLMLTLLSLAGLPPLTGF 260
Cdd:PRK05846 316 VTLgIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVL-YDRLHTRDIAdygglAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
....*..
gi 327199769 261 LPKWLII 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
8.93e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.93 E-value: 8.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 34 EINTLA---MIPLISKshhpRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQ----LTNPPS-------CILLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADisqgLINDTStgfalivFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 100 TAIAIKLGLTPFHFWFPE-----------VLQGS-SLITALLLSTAMKLPPITILLLT-----SHSLNPTLLTILAVMSI 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 163 ALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLT----LLTFYLYTLMTASIFLSMNSI----NILKLSTLMTSW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327199769 235 TKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-305 |
2.23e-08 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 55.47 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 95 CILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTS--HSLNPTLL---TILAVMSIALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFEQAPLALiivTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 170 LNQTQTRKILAFSSISHLGWMTIII-VYNPKLTLLTFYLYTLMTASIFLSMNSI--------NILKLSTLMTSwtkTPML 240
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LPLT 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 327199769 241 NAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLS-LLGLFFYLRLAYCSTITLP 305
Cdd:MTH00020 370 YIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNT 435
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-292 |
7.36e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.58 E-value: 7.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 33 LEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFS-----------SMTNAWSSGQWDITQLTNPPSCILLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 102 IAIKLGLTPFHFWFPEVLQGS-SLITALLLSTAMKLPPITI-----------LLLTSHSLNpTLLTILAVMSIALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIirivydvfkanFVFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 170 LNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLY----TLMTASIFLSMNSI----NILKLSTLMTSWTKTPMLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 327199769 242 AVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFF 292
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
28-268 |
1.34e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.01 E-value: 1.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 28 MAWIGLEINTLAMIPLISKSHHPRATEAATKYFLV------QATASTLMLFSSMTNAWSSGQWDI--TQLTNPPSC---I 96
Cdd:PRK06458 132 LMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAATVMGDGEMAIlwTELLKHASLldpT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 97 LLTTAIAI-------KLGLTPFHFWFPEVLQG-----SSLITALLLSTAMkLPPITILLLTSHSLNP----TLLTILAVM 160
Cdd:PRK06458 212 LMKLAFVFlligfgtKVGLFPMHAWLPDAHSEapspvSALLSGVLLNVAL-YAVLRYYILIDAAIGSdfpgRLLLIFGLL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTLM----TASIFLSMNSI-------NILKLST 229
Cdd:PRK06458 291 SVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFFASGNVlqkygtrDINVIRG 370
|
250 260 270
....*....|....*....|....*....|....*....
gi 327199769 230 LMTSwtkTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 371 LLKV---SPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
30-295 |
1.49e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.83 E-value: 1.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 30 WIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATA------STLMLFSSMTNAWSSGQWDITQLTN-----PPSCILL 98
Cdd:PRK08676 128 WIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAhasllSPSVLGA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 99 T-----TAIAIKLGLTPFHFWFPEV-LQGSSLITALLLSTAMKLPPITILLLTS-------HSLNPTLLTILAVMSIALG 165
Cdd:PRK08676 208 SflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAEQFSNVLIGLGIFSIAVA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 166 GWMGLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTL----MTASIFLSMNSINILKLSTLMTSWTKTPMLN 241
Cdd:PRK08676 288 AFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLahslVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQ 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 327199769 242 AV----LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLG---LFFYLR 295
Cdd:PRK08676 368 PVaawgVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
1.60e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.04 E-value: 1.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 111 FHFWFPEVLQGSSLITALLLSTAMKLPPITIL-----LLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 186 HLGWMTIIIVYNPKLTLLTFYL--YTLMTASIFLSMNSI---------NILKLSTLMTSwtkTPMLNAVLMLTLLSLAGL 254
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 327199769 255 PPLTGFLPKWLIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
2.33e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 52.39 E-value: 2.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 38 LAMIPL---ISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSG----QWDITQLTNPP--SCILLTTAI----AI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGassfDYEPLRSHTLPlsTQLLLLAPIlvgfGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 105 KLGLTPFHFWFPEV-LQGSSLITALLLSTAMKLPPITIL------LLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 178 ILAFSSISHLGWMTIIIVYNPKLTLLTFYL----YTLMTASIFL-------SMNSINILKLSTLMTSWTKTPMLNAVLML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILAAVFqmisHGLISALLFLlvgvvykKTGSRDVDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 327199769 247 TLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-320 |
2.85e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.96 E-value: 2.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 34 EINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQ-----LTNPPSCILLTTAIAIKLG- 107
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 108 -----LTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLT-----SHSLNPTLLTILAVMSIA---LGGWMGLNQTQ 174
Cdd:PRK06277 210 lygsgLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLamvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 175 TRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYT----LMTASIFLSMNSINILK----LSTLMTSWTKTPMLNAVLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVSYRTktsnLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 327199769 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRLAYcsTITLPPNsPNKMKQWSTKKP 320
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPK-PEELEYKNKKVP 440
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
4.18e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 51.75 E-value: 4.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 48 HHPRATEAATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNPPSCI--------LLTTAIAIKLGLT------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 114 WFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPT-----LLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 189 WMTIIIVYNPK------LTLLTFYLYTLMT--ASIFLSMNSI-------NILKLSTLMTSWTKTPMlnaVLMLTLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATfkACLFLVAGIVaheaatrDIRKLGGLRKEMPITFI---VASIAALAMAG 392
|
250
....*....|
gi 327199769 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
3.15e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.81 E-value: 3.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 96 ILLTTAIAIKLGLTPFHFWFPEVL-QGSSLITALLLSTAMKLPPITI-----LLLTSHSLNpTLLTILAVMSIALGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 170 LNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYT----LMTASIFLSMNSI-------NILKLSTLMTSwtkTP 238
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIerqagssSLRRLGGLAKA---SP 368
|
170 180 190
....*....|....*....|....*....|
gi 327199769 239 MLNAVLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-272 |
4.21e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 48.60 E-value: 4.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 92 PPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITIL-----LLTSHSLNPTLLTILAVMSIALGG 166
Cdd:PRK12646 210 IPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 167 WMGLNQTQTRKILAFSSISHLGW-MTII-----IVYNPKLTLLTFY-------LYTLMTASIFLSM------------NS 221
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCAlfmgvgiidheaGT 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 327199769 222 INILKLSTLMTSWtktPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 370 RDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
4.69e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 48.28 E-value: 4.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 107 GLTPFHFWFPEVLQGSSLITALLLSTA-MKLPPITILLLTSHSLNPTL-----LTILAVMSIALGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 181 FSSISHLG--------WMTIIIVYNPKLTLLTFY--LYTLMTASIF-----LSMNSI-------NILKLSTLmtsWTKTP 238
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFksvlfLGAGSVwfrtghrDIEKLGGI---GKKMP 351
|
170 180 190
....*....|....*....|....*....|....
gi 327199769 239 MLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
8.06e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.33 E-value: 8.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 55 AATKYFLVQATASTLMLFSSMTNAWSSGQ--WDITQLTN---PPSCILLT-----TAIAIKLGLTPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 327199769 124 LITALLLSTAMKLPPITI------LLLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLGWMTIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-279 |
2.17e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 45.96 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 30 WIGLEINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMT---NAWSSGQW-DITQLTNPPSCILLTTAIA-- 103
Cdd:PRK06589 142 FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFvSGGLFSKNQSIILLLMFIYgi 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 104 IKLGLTPFHFWFPEVLQGSSLITALLLSTAM----KLPPITILLLTSHSLNPT-------LLTILAVMSIALGGWMGLNQ 172
Cdd:PRK06589 222 AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQrifaefnWLIFIPIVSIFYSSLKALKT 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 173 TQTRKILAFSSISHLGW--MTIIIVYNPKLTLLTFYLYT--LMTASIFLSMNSINILK----LSTLMTSWTKTPMLNAVL 244
Cdd:PRK06589 302 DNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVShsFAKICLFYSMGSIYSLKkedqVDKLHGTSKSFPLISFII 381
|
250 260 270
....*....|....*....|....*....|....*
gi 327199769 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTA 279
Cdd:PRK06589 382 SISSLSLIGIPIFSGFISKFLILLAASEQNQPWLS 416
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
70-268 |
2.18e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 46.30 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 70 MLFSSMTNAWSSGQWDITQLTNPPSCILLTTAIAI----KLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILL-- 143
Cdd:MTH00207 153 MLLLSIGWTLNQGHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrf 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 144 ---LTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLG-WMTIIIVYNPKLTLLTFYLYTLMTASIFLSM 219
Cdd:MTH00207 233 ypfLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCA 312
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 327199769 220 NSI-----NILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 313 GSLihshhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
2.32e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.86 E-value: 2.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 55 AATKYFLVQATASTLMLFSSMTNAWSSGQ----WDITQLTNPP---SCILLTTAI---AIKLGLTPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGStsfdYDAISTQNLSlntQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 125 ITALLLSTAM-KLPPITILLL-------TSHSLNPTLLTILAVmSIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVY 196
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 197 NPKLTLL----TFYLYTLMTASIFLSMNSI-------NILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 317 GTQLSLLgavaQMISHGLILALLFHLVGIVerkvgtrDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 327199769 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-303 |
2.63e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 45.77 E-value: 2.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 105 KLGLtpfHFWFPEVLQGSSLITALLLSTAMKLPPITIL-----LLTSHSLNPTLLTILAVMSIALGGWMGLNQTQTRKIL 179
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIirsgpLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 180 AFSSISHLGWMTIII-VYNPKLTLLTFYLYTLMTASIFLSMNSI--------NILKLSTLMTSwtkTPMLNAVLMLTLLS 250
Cdd:MTH00210 304 AYSTCSQLGYMVMVCgISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeqDMRKMGGLIKS---IPFTYVMILIGSLS 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 327199769 251 LAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLS-LLGLFFYLRLAYCSTIT 303
Cdd:MTH00210 381 LMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT 434
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
2.67e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.71 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 96 ILLTTAIAIKLGLTPFHFWFPEVLQG-----SSLITALLLSTAMKLPPITILLLTSHSLNPT--LLTILAVMSIALGGWM 168
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAppiaiAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 169 GLNQTQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYT----LMTASIFLSMNSI-------NILKLSTLMTSWtkt 237
Cdd:PRK07691 293 AVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIGIMikitgttDLKKMGGLIKRY--- 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 327199769 238 PMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISMLSLLGLFFYLRL 296
Cdd:PRK07691 370 PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
30-270 |
4.65e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.17 E-value: 4.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 30 WIGLEINTLAMIPLISKSHHPRATeaatkyFLVQATASTLMLFSSMTNAWS-SGQWDITQLTNPPSCILLTTAIAIKLGL 108
Cdd:PRK06459 101 WEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLPSPVPLILASFGFIIKMGM 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 109 TPFHF--WFPEVLQGSSLITALLLSTAMKLPPI-----TILLLTSHSLNPTLLTILAV--MSIALGGWMGLNQTQTRKIL 179
Cdd:PRK06459 175 MPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilkMTILTQTIPIGYFGLTILAIgaFSILFGALYAYVSENVKGLL 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 180 AFSSISHLGWM-----TIIIVYNPKLTLLTFYLYTLMTAS---------IFLSMNSINILKLSTLMTSWTKTPMLNAVLM 245
Cdd:PRK06459 255 AFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSITYSKKIRNRWIELGLTLL 334
|
250 260
....*....|....*....|....*
gi 327199769 246 LtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 335 A--SSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
68-285 |
5.64e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 44.90 E-value: 5.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 68 TLMLFSSMTNAWSSGQWDITQLTNPPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPItILLLTSH 147
Cdd:MTH00066 183 SMAWLAMNTNSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGI-FLLIRFH 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 148 SL---NPTLLTI---LAVMSIALGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYN-PKLTLLTFYLYTLMTASIFLSMN 220
Cdd:MTH00066 262 PLlenNQTALTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFFHICTHAFFKAMLFLCSG 341
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 327199769 221 SI--------NILKLSTLMTSwtkTPMLNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATTISML 285
Cdd:MTH00066 342 SIihslndeqDIRKMGGLQKA---LPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLI 411
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
1.77e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.04 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 33 LEINTLAMIPLISKSHHPRATEAATKYFLVQ-------ATASTLMLFSSMTNAWSSGQwDITQLTNPPSCILLTTAIAIK 105
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLIThigslglYLAAATLFLQTGTFALSALS-GLHGSLKYLVFLGILFAAWGK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 106 LGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNP------TLLTILAVMSIALGGWMGLNQTQTRKIL 179
Cdd:PRK06525 221 SAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLL 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 180 AFSSISHLGWMTIII---VYNPKLTLL--TFYLYT---------LMTASIFLSMNSINILKLSTLMtswTKTPMLNAVLM 245
Cdd:PRK06525 301 AYSTITQLGYMFFGLslaILGSRLALEgsIAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFC 377
|
250 260
....*....|....*....|..
gi 327199769 246 LTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 378 VAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-325 |
2.09e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.01 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 96 ILLTTAIAIKLGLTPFhFWFPEVLQGSSLITALLLSTAMK------LPPITILLLTSHS-LNPTLLTILAVMSIALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyaLIRVFTLLFPQEReLLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 169 GLNQTQTRKILAFSSISHLGWMTI-IIVYNPK-LTLLTFYLY---TLMTAsIFLSMNSINIL----KLSTLMTSWTKTPM 239
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVhdmVVKTA-LFLIAGSLVRLtgyrSLQYLGGLYRKEPL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 240 LNAVLMLTLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTTTATTI--SMLSLLGLFFYLRLAYCSTITLPPNSPNKMKQWs 316
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLitSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLY- 447
|
....*....
gi 327199769 317 TKKPINTLT 325
Cdd:PRK12663 448 RKLPLSILA 456
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
2.23e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.99 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 101 AIAIKLGLTPFHFWFPEV-----LQGSSLITALLLST---AMKLPPITILLLTSHSLNPTLLTiLAVMSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggyGLVRLSWPILPLGAQNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 173 TQTRKILAFSSISHLGWMTIIIVYNPKLTLLTFYLYTL---MTASIFLSMNSINILKLSTLMTSWTK-----TPMLNAVL 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 327199769 245 MLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
34-291 |
3.70e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.41 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 34 EINTLAMIPLISKSHHPRATEAATKYFLVQATASTLMLFSSMTNAW-SSGQWDITQLTNPP-----SCILLTTAIAIKLG 107
Cdd:PRK08667 141 EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAgilslVFLLLFLGFGIKAG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 108 LTPFHFWFPEVLQGS-SLITALLLSTAMKLPPITILLLTSHSLNP-----TLLTILAVMSIALGGWMGLNQTQTRKILAF 181
Cdd:PRK08667 221 IIPFHKWLPYAHPASpSNVSALMSGVMLKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAY 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 182 SSISHLGWMTIII-------VYN-PKLTLLT-------------FYLYTLMTA-SIFLSMNSINILKLSTLMTSwtkTPM 239
Cdd:PRK08667 301 SSIENIGIILMGIglyvifgVYGlDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPY 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 327199769 240 LNAVLMLTLLSLAGLPPLTGFLPKWLIIQELTKQ-EMTTTATTISMLSLLGLF 291
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFFQSfSVADPLIKILLFSVLAIF 430
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-267 |
5.95e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.48 E-value: 5.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 69 LMLFSSMTNAWSSGQWDITQLTNPPSCILLTTAIAIKLGLTPFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHS 148
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 149 LNPTLLTILAVMSIA-----LGGWMGLNQTQTRKILAFSSISHLGWMTIIIVYN-PKLTLLTFYLYTLMTASIFLSMNSI 222
Cdd:MTH00211 261 FQNNQLILGAVLLLGaltmlFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMCSGSI 340
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 327199769 223 -----NILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00211 341 ihglnNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
110-300 |
2.21e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 39.63 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 110 PFHFWFPEVLQGSSLITALLLSTAMKLPPITILLLTSHSLNPT-----LLTILAVMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:MTH00209 193 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpffsmSLLLLGSLTTLMASMSANVESDLKKIIALSTL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 185 SHLGWMTIIIVYN-PKLTLLTFYLYTLMTASIFLSMNSI-----NILKLSTLMTSWTKTPMLNAVLMLTLLSLAGLPPLT 258
Cdd:MTH00209 273 SQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAGNIihshgHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLA 352
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 327199769 259 GFLPKWLIIQELTKQEMTTTATTISMLSL-LGLFFYLRLAYCS 300
Cdd:MTH00209 353 GFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-190 |
2.40e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 39.62 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 110 PFHFWFPEVLQGSSLITALLLSTAMKLPPITIL--LLTSHSLNPTLLTILAV---MSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWtgaITAFLGASIALTQNDIKKGLAYSTI 324
|
....*.
gi 327199769 185 SHLGWM 190
Cdd:PRK07376 325 SQLGYM 330
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
55-192 |
5.53e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.51 E-value: 5.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 327199769 55 AATKYFLVQATASTLMLFSSMTNAWSSGQWDITQLTNP--PSCILLTTAI------AIKLGLTPFHFWFPEV-----LQG 121
Cdd:MTH00204 164 ASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIklPLSIQKWLLVgfflslAVKIPQIPFHIWLPQAhveapVAG 243
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 327199769 122 SSLITALLLstamKLP-------PITILLLTSHSLNPtLLTILAVMSIALGGWMGLNQTQTRKILAFSSISHLGWMTI 192
Cdd:MTH00204 244 SVILAGILL----KLGgygflrfSWPLFPAASEYFAP-LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
|
| |
