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Conserved domains on  [gi|326633087|ref|YP_004306698|]
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hypothetical protein Vi06_51 [Salmonella phage Vi06]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA00406 super family cl10200
hypothetical protein
 13-49 2.26e-10

hypothetical protein


The actual alignment was detected with superfamily member NF040465:

Pssm-ID: 447896  Cd Length: 47  Bit Score: 49.23  E-value: 2.26e-10
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 326633087 13 VTYRFLMVLCAALGYASLNGDLSSLEYALCSILTCSD 49
Cdd:NF040465 11 VTYRFLAVLLAALGVASGTQHLGQLETLVCSVLTCSD 47
 
Name Accession Description Interval E-value
T7_gp19.5 NF040465
gp19.5 family protein; Members of this family are phage proteins in the family of gp19.5 of ...
 13-49 2.26e-10

gp19.5 family protein; Members of this family are phage proteins in the family of gp19.5 of phage T7.


Pssm-ID: 439697  Cd Length: 47  Bit Score: 49.23  E-value: 2.26e-10
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 326633087 13 VTYRFLMVLCAALGYASLNGDLSSLEYALCSILTCSD 49
Cdd:NF040465 11 VTYRFLAVLLAALGVASGTQHLGQLETLVCSVLTCSD 47
PHA00406 PHA00406
hypothetical protein
 13-49 9.32e-10

hypothetical protein


Pssm-ID: 164797  Cd Length: 48  Bit Score: 47.49  E-value: 9.32e-10
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 326633087 13 VTYRFLMVLCAALGYASLNGDLSSLEYALCSILTCSD 49
Cdd:PHA00406 12 VTYRFLLVLAAALGYASLTDHLGQLETLVCSILTCSD 48
 
Name Accession Description Interval E-value
T7_gp19.5 NF040465
gp19.5 family protein; Members of this family are phage proteins in the family of gp19.5 of ...
 13-49 2.26e-10

gp19.5 family protein; Members of this family are phage proteins in the family of gp19.5 of phage T7.


Pssm-ID: 439697  Cd Length: 47  Bit Score: 49.23  E-value: 2.26e-10
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 326633087 13 VTYRFLMVLCAALGYASLNGDLSSLEYALCSILTCSD 49
Cdd:NF040465 11 VTYRFLAVLLAALGVASGTQHLGQLETLVCSVLTCSD 47
PHA00406 PHA00406
hypothetical protein
 13-49 9.32e-10

hypothetical protein


Pssm-ID: 164797  Cd Length: 48  Bit Score: 47.49  E-value: 9.32e-10
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 326633087 13 VTYRFLMVLCAALGYASLNGDLSSLEYALCSILTCSD 49
Cdd:PHA00406 12 VTYRFLLVLAAALGYASLTDHLGQLETLVCSILTCSD 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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