|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 684.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 1 MCSLSFFSLFFSSTFIFILGIYYLMVDYSLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEK 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 81 NINRFIIIVLMFILSRYLF-MTPPLISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFG 159
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLiISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 160 SWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNC 239
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 240 GWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDS 319
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 320 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSG 399
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 400 DNNFYSSFSFDDNGYYISFGMIGLLFVAVFGGSLLSWLIFPVPYMISLPYYLKFMTITVVMLGSYLGYLISKFNFSYNLF 479
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 480 SLNFLSFVSFAGSMWFMPFLSTKFISYLPLKMGFYSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLLTFI 559
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 326370512 560 FWMFILVMLFL 570
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
17-569 |
7.95e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 483.38 E-value: 7.95e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 17 FILGIYYLMVDYSLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILS- 95
Cdd:MTH00209 17 FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSm 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 96 RYLFMTPPLISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNyIYYYDFILGSfe 175
Cdd:MTH00209 97 NFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 176 MKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCLTMFMA 254
Cdd:MTH00209 174 GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSSPFFSMSLLLLGSLTTLMA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 255 GFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPL 334
Cdd:MTH00209 254 SMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPI 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 335 TSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGY 414
Cdd:MTH00209 334 TSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 415 YISFGMIGLLFVAVFGGSLLSWLIFPVPYMISLPYYLKFMTITVVMLGSYLGYLISKFNFsynlFSLNFLSFVSFAGSMW 494
Cdd:MTH00209 414 LNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNF----FLIKGYKVNYFLSQMW 489
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 326370512 495 FMPFLSTKFISYLPLKMGFYSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLLTFIFWMFILVMLF 569
Cdd:MTH00209 490 FLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
16-570 |
1.38e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 483.11 E-value: 1.38e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 16 IFILGIYYLMVDYSLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILS 95
Cdd:MTH00207 21 MFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 96 -RYLFMTPPLISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDfilgSF 174
Cdd:MTH00207 101 mNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQ----TD 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 175 EMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcgWF---LLLIGCLTM 251
Cdd:MTH00207 177 MNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTY--WFnpaLLLTASLTM 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 252 FMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNF 331
Cdd:MTH00207 255 LMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQ 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 332 MPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDD 411
Cdd:MTH00207 335 MPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLED 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 412 NGYYISFGMIGLLFVAVFGGSLLSWLIFPVPYMISLPYYLKFMTITVVMLGSYLGYLISKFNFSYNLFSLNFLSFVSFAG 491
Cdd:MTH00207 415 EDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASC 494
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 326370512 492 SMWFMPFLSTKFISYLPLKMGFYSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLltFIFWMFILVMLFL 570
Cdd:MTH00207 495 LMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL--MMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
17-569 |
1.61e-164 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 480.11 E-value: 1.61e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 17 FILGIYYLMVDYSLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSR 96
Cdd:MTH00151 19 FPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSM 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 97 YLFM-TPPLISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFILGSFe 175
Cdd:MTH00151 99 NLLIfIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKLSGW- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 176 mkvITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYN-CGWFLLLIGCLTMFMA 254
Cdd:MTH00151 178 ---LGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSgFSSFLLFISLLTLLMA 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 255 GFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPL 334
Cdd:MTH00151 255 GISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 335 TSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGY 414
Cdd:MTH00151 335 TSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDF 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 415 YISFGMIGLLFVAVFGGSLLSWLIFPVPYMISLPYYLKFMTITVVMLGSYLGYLisKFNFSYNLFSLNFLSFvsFAGSMW 494
Cdd:MTH00151 415 YVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFG--FWDSGFSSSKMVKLSF--FFSSMW 490
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 326370512 495 FMPFLSTKFISYLPLKMGFYSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLLTFIFWMFILVMLF 569
Cdd:MTH00151 491 FLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
16-571 |
2.38e-114 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 352.33 E-value: 2.38e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 16 IFILGIYYLMVDYSLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILS 95
Cdd:MTH00211 43 LIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 96 RYLFMTPP-LISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTAL-SNRIGDVAILISIAWML-NFGSWNYIYYYDFilg 172
Cdd:MTH00211 123 MLILVSANnLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFIL--- 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 173 SFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LDTYNCGWFLLLIGCLTM 251
Cdd:MTH00211 200 NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNNQLILGAVLLLGALTM 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 252 FMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNF 331
Cdd:MTH00211 280 LFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKN 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 332 MPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDD 411
Cdd:MTH00211 360 LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINE 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 412 NGYYISFGMIGLLFVAVFGGSLLSWLIFPVPYMI-SLPYYLKFMTITVVMLGSYLGYLISKFnfsynLFSLNFLSFVSFA 490
Cdd:MTH00211 440 NYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELVNL-----THKQLKTSTLSFS 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 491 GSMWFMPFLSTKFISYLPLKMG-FYSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLLTFIFWMFILVMLF 569
Cdd:MTH00211 515 NMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLF 594
|
..
gi 326370512 570 LL 571
Cdd:MTH00211 595 LL 596
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
34-466 |
4.49e-93 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 297.08 E-value: 4.49e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYLFMTP-PLISILLRWD 112
Cdd:MTH00004 66 WPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITAnNMFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 113 GLGLVSYCLVIYYQN-VKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNyiyyydfILGSFEMKVITML----IVLA 186
Cdd:MTH00004 146 GVGIMSFLLIGWWSGrAEANTAALQAIIYNRIGDIGLILSMAWLaMTLNTWE-------IQQLFSPTQTPTLpllgLILA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 187 AMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYN-----CgwflLLIGCLTMFMAGFGANFE 261
Cdd:MTH00004 219 ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQtaltiC----LCLGALTTLFAATCALTQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 262 FDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNV 341
Cdd:MTH00004 295 NDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTI 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 342 SSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMI 421
Cdd:MTH00004 375 GNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPIT 454
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 326370512 422 GLLFVAVFGGSLLSWLIFPV-PYMISLPYYLKFMTITVVMLGSYLG 466
Cdd:MTH00004 455 RLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLA 500
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-569 |
3.70e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 286.80 E-value: 3.70e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 29 SLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYLFMTP-PLISI 107
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTAnNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 108 LLRWDGLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFILGSFEMKVITMLIvL 185
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNSTLPLLGLI-L 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 186 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCLTMFMAGFGANFEFDL 264
Cdd:MTH00066 216 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLCLGALTTLFTAACALTQNDI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 265 KKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSL 344
Cdd:MTH00066 296 KKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSL 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 345 SLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLL 424
Cdd:MTH00066 376 ALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLA 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 425 FVAVFGGSLLSWLIFPVPYMI-SLPYYLKFMTITVVMLGSYLGYLISKFNFSYNLFSLNFlsfvSFAGSMWFMPFLSTKF 503
Cdd:MTH00066 456 WGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH----SFSNLLAFFPTIIHRL 531
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 326370512 504 ISYLPLKMGF-YSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLLTFIFWMFILVMLF 569
Cdd:MTH00066 532 SPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-571 |
2.19e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 285.71 E-value: 2.19e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 37 FNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFI---IIVLMFILsrYLFMTPPLISILLRWDG 113
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFrllIIFLLNML--ILTSSNNLFLLFIGWEG 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 114 LGLVSYCLVIYYQNVKSYSAGMLTA-LSNRIGDVAILISIAW-MLNFGSWNY--IYYYDFILGSFeMKVITMLIVLAAMT 189
Cdd:MTH00208 170 VGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLneILSLNNSNSFL-INILLFGILLAAAG 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 190 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDtyNCGWFL---LLIGCLTMFMAGFGANFEFDLKK 266
Cdd:MTH00208 249 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLILGSLTALFAASTAISQHDIKK 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 267 IIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSL 346
Cdd:MTH00208 327 IIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLAL 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 347 CGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLLFV 426
Cdd:MTH00208 407 MGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIG 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 427 AVFGGSLLSWLIFPVPyMISLPYYLKFMTITVVMLGSYLGYLISKFnFSYNLFSLNFLSFVSFAgsmWFMPFLSTKFISY 506
Cdd:MTH00208 487 TIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFLLS-LSSNPINSNFFSFLSNQ---WFFVNISHSIIIS 561
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 326370512 507 LPLKMGFY-SSKSFDYGWGELLGGQGLYELFIYVIGYVQSWYDFNFSIYLLTFIFWMFILVMLFLL 571
Cdd:MTH00208 562 FSFFTSLFgSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLI 627
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
34-469 |
2.09e-84 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 274.72 E-value: 2.09e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWD 112
Cdd:COG1009 62 YTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLgLVLSDNLLLLFVFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 113 GLGLVSYCLVIYYQNVKSYSAGMLTA-LSNRIGDVAILISIAWMLN-FGSWNY---IYYYDFILGSFEMKVITMLIVLAA 187
Cdd:COG1009 142 LVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAAAPTILSSPLLTLILLLLLLGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 188 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCLTMFMAGFGANFEFDLKK 266
Cdd:COG1009 222 FGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSPVWLTVVAIIGAITALFAALIALAQTDIKR 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 267 IIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSL 346
Cdd:COG1009 302 VLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSL 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 347 CGMPFLAGFYSKDLILE-MVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLLF 425
Cdd:COG1009 381 AGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAV 460
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 326370512 426 VAVFGGSLLSWL---------IFPVPYMISLPYYLKFMTITVVMLGSYLGYLI 469
Cdd:COG1009 461 LSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
46-516 |
2.11e-84 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 274.42 E-value: 2.11e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYLFMTPP-LISILLRWDGLGLVSYCLV-I 123
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANnLFQLFIGWEGVGIMSFLLIgW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 124 YYQNVKSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWNYIYYydFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPA 202
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPS 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 203 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLigCL----TMFMAgFGANFEFDLKKIIALSTLSQLGL 278
Cdd:MTH00108 236 AMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTL--CLgaitTLFTA-ICALTQNDIKKIVAFSTSSQLGL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 279 MMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 358
Cdd:MTH00108 313 MMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 359 DLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLLFVAVFGGSLLSWLI 438
Cdd:MTH00108 393 DLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNI 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 439 FP--VPYMiSLPYYLKFMTITVVMLGSYLGYLISkfNFSYNLFSLNFLSFVSFAGSMWFMPFLSTKFISYLPLKMGFYSS 516
Cdd:MTH00108 473 PPttIPQM-TMPLYLKLTALAVTILGFILALELN--LLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLA 549
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-469 |
6.81e-77 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 254.90 E-value: 6.81e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSR-YLFMTPPLISILLRWD 112
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMlMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 113 GLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFILGSFE--MKVITMLIVLAAM 188
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAFFsaLTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 189 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD-TYNCGWFLLLIGCLTMFMAGFGANFEFDLKKI 267
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFElSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 268 IALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 347
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 348 GMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLLFVA 427
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 326370512 428 VFGGSLLSWLIFPVPYMI-----------SLPYYLKFMTITVVMLGSYLGYLI 469
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
51-397 |
2.17e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 253.60 E-value: 2.17e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 51 DWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYLFMTPP-LISILLRWDGLGLVSYCLV-IYYQNV 128
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANnMFQLFIGWEGVGIMSFLLIgWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 129 KSYSAGMLTALSNRIGDVAILISIAWML-NFGSWNyIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAP 207
Cdd:MTH00137 167 DANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 208 TPVSALVHSSTLVTAGVYLLIRFSPMLDTYN-----CgwflLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSI 282
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLMENNQtalttC----LCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVT 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 283 LAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:MTH00137 322 IGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAII 401
|
330 340 350
....*....|....*....|....*....|....*.
gi 326370512 363 EMVCLSWINCLIFFLYFFSTGLTASYSFRL-FYYSM 397
Cdd:MTH00137 402 EALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-393 |
2.77e-73 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 245.45 E-value: 2.77e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSR-YLFMTPPLISILLRWDGLGLVSYCLVIY 124
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMlMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 125 YQNVKSYSAGMLTA-LSNRIGDVAILISIAWML-NFGSWNYIY-----YYDFILGSFEMKVITMLIVLAAMTKSAQIPFS 197
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYDEvfaaaPQFFGLGWSALTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 198 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD-TYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQL 276
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFElSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 277 GLMMsiLAMGFP--KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 354
Cdd:PRK06590 318 GYMF--LALGVGayAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAG 395
|
330 340 350
....*....|....*....|....*....|....*....
gi 326370512 355 FYSKDLILEmVCLSWINCLIFFLYFFSTGLTASYSFRLF 393
Cdd:PRK06590 396 FFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
34-565 |
4.36e-68 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 231.50 E-value: 4.36e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 34 WELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYLFMTPP-LISILLRWD 112
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDnYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 113 GLGLVSYCLV-IYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFILG--SFEMKVITMLIVLAAM 188
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVSapSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 189 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLL-LIGCLTMFMAGFGANFEFDLKKI 267
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 268 IALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLC 347
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 348 GMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYS-MSGDNNFYSSFSFDDNGYYISFGMIGLL-F 425
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTfLSNTNLKKAVFFHLHEGDWNLLLPLGILaL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 426 VAVFGGSLLSWLIF--------PVPYMISL-PYYLKFM-TITVVMLGSYLGYLISKFNFSYNLFSLNFLsfvsfaGSMWF 495
Cdd:MTH00020 462 GSIFVGYLAKEMIWsfqitlppIVPLSIKLlPVFLSLGgIGLVIILYFYSSKTFRVPFSFIGRNSYTFL------GSAWQ 535
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 326370512 496 MPFLSTKFISYLPLKMG-FYSSKSFDYGWGELLGGQGLYELFIYV---IGYVQSWYDFNFS-IYLLTFIFWMFIL 565
Cdd:MTH00020 536 FNYILNYFLIKKIWKGGhLISYRTIDKGVLELVGPKGISNFLIILtqgLSSLQSGLVFNYAlVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
48-571 |
8.47e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 225.27 E-value: 8.47e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 48 LILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFiiivlMFILSRYLFMTPPL------ISILLRWDGLGLVSYCL 121
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRF-----MSYLSLFTFLMIVLvtsdnyVQLFIGWEGVGLCSYLL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 122 V-IYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFILGSFE---MKVITMLIVLAAMTKSAQIPF 196
Cdd:MTH00210 151 InFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 197 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLL-LIGCLTMFMAGFGANFEFDLKKIIALSTLSQ 275
Cdd:MTH00210 231 HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQ 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 276 LGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 355
Cdd:MTH00210 311 LGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 356 YSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSS--FSFDDNGYYISFGMIGLLFVAVFGGSL 433
Cdd:MTH00210 391 YSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEvfIGVHESSWNITFPLLLLAFGSIFVGYL 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 434 -----LSWLIFPVpymisLPYYLKFMTITVVMLGSYLGYLI------SKFNFSYNLFSLNFLSFVSFAGSMWFMPFLSTK 502
Cdd:MTH00210 471 gkevvLSNVIPPI-----VPNSIKMIPLLFSLLGALLAFVIynsmvfLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINH 545
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 326370512 503 FISYLPLKMGFY-SSKSFDYGWGELLGGQGLYELFIYV---IGYVQSWYDFNfsiylltFIFWMFILVMLFLL 571
Cdd:MTH00210 546 FIVKNIWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLtqkISNLQSGMVFN-------YALIMIIFTTLFIS 611
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
31-521 |
1.35e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 198.60 E-value: 1.35e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 31 FVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILL 109
Cdd:MTH00095 24 FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFmLNFSNSVFTMLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 110 RWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILIsiawmlnFGSWNYIYYYDFILGSFEMKVITMLIVLAAMT 189
Cdd:MTH00095 104 SWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSSYYFFSFSFFSSSMILMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 190 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIA 269
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 270 LSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 349
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 350 PFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIglLFVAVF 429
Cdd:MTH00095 337 MFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNFLSLMLV--FFSVFF 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 430 GGSLLSWLIFPVPYMISLPYYLKFMTITVVMLGSYLGYLISKFNFSYNLFSLNFLSFVSFAGSMW-FMPFLSTKFISYLP 508
Cdd:MTH00095 415 LWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLkFFDLFLNKFGYKGF 494
|
490
....*....|...
gi 326370512 509 LKMGFYSSKSFDY 521
Cdd:MTH00095 495 NFFSSFSFFFFSY 507
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-400 |
2.02e-54 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 195.63 E-value: 2.02e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLGLVSYCLVIY 124
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLgLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 125 YQNVKSYSAGMLTA-LSNRIGDVAILISIAWMLnfgswnyiyyydFILGSFEMKVI---------------------TML 182
Cdd:PRK07376 165 WYDRKGAADAAQKAfVVNRVGDFGLLLGILGLF------------WATGSFDFDGIadrlselvssgavsgwlalllCIL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 183 IVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTY-NCGWFLLLIGCLTMFMAGFGANFE 261
Cdd:PRK07376 233 VFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFpAVMTVIAWTGAITAFLGASIALTQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 262 FDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKD--------SQDIRFMGSIVNFMP 333
Cdd:PRK07376 313 NDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMP 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 326370512 334 LTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSwiNCLIFFLYFFSTGLTASYSFRLFYYSMSGD 400
Cdd:PRK07376 393 ITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
104-381 |
2.49e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 180.59 E-value: 2.49e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 104 LISILLRWDGLGLVSYCLVIYY-QNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFILGSFEMKV 178
Cdd:pfam00361 4 LLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSGLLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 179 ITMLIVLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW--FLLLIGCLTMFMAG 255
Cdd:pfam00361 84 LFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 256 FGANFEFDLKKIIALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFM 332
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAKTM 242
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 326370512 333 PLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFS 381
Cdd:pfam00361 243 PILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
48-569 |
1.14e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 182.47 E-value: 1.14e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 48 LILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMF-ILSRYLFMTPPLISILLRWDGLGLVSYCLVIYYQ 126
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFtFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 127 N-VKSYSAGMLTALSNRIGDVAILISIAWM------LNFGSWNYIYYYDFILGSFEMK------------VITMLIVLAA 187
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSGIMDRGYYGggayesplapfaIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 188 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLI-GCLTMFMAGFGANFEFDLKK 266
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 267 IIALSTLSQLGLMMSILAM-GFPKLAFFHLLAHALFKALLFMCAGSMIHNLK-DSQDIRFMGSIVNFMPLTSVCFNVSSL 344
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 345 SLCGMPFLAGFYSKDLILEMVCL------------------------------------SWINCLIFFLYFFSTGLTASY 388
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 389 SFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLLFVAVFGGSLLSWLIFPV-----------PYMISLPYYLKFMTIT 457
Cdd:MTH00032 476 SIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdiehpivpPLIKVMPTLMGLFGMG 555
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 458 VVMLGSYLGYLISKFNFSYNLFSLNFLSFVSFAGSMWFMPFLSTKFISYLPLKMGFYSS-KSFDYGWGELLGGQGLYELF 536
Cdd:MTH00032 556 LCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIA 635
|
570 580 590
....*....|....*....|....*....|...
gi 326370512 537 IYVIGYVQSWYDFNFSIYLLTFIFWMFILVMLF 569
Cdd:MTH00032 636 LRVSQFISNLQSGVISRYALVLLSFTIIFLALW 668
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-363 |
3.62e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 177.54 E-value: 3.62e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 40 NGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYLF-MTPPLISILLRWDGLGLVS 118
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLvLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 119 YCLViyyqnVKSYSAG----MLTALSNRIGDVAILISIAWMLN-FGSWNYiyyyDFILGSFE-------MKVITMLIVLA 186
Cdd:PRK12650 147 FFLI-----ARSGSGGeagsIRTLILTFFGGLTLLAAVAIAATqTGTTSL----SGILHSDVwaekpglTTVVAVLIAVA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 187 AMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTyNCGWFLLLIGC--LTMFMAGFGANFEFDL 264
Cdd:PRK12650 218 AFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD-VAVWNWLLIIVgmITALMGAVFAVQKTDL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 265 KKIIALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNV 341
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTI 375
|
330 340
....*....|....*....|..
gi 326370512 342 SSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK12650 376 AALSMAAVPPLFGFVSKEGMLT 397
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-395 |
9.87e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 163.78 E-value: 9.87e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRYL-FMTPPLISILLRWDGLGLVSYCLVIYY 125
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGaFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 126 QNVKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWNYIYYYDFI--LGSFEMKVITMLIVLAAMTKSAQIPFSSWLPA 202
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 203 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYN----CGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLG 277
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADpalfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 278 LMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 354
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 326370512 355 FYSKDLILEMVcLSWINCLIFFLYFFSTGLTASYSFRLFYY 395
Cdd:COG0651 389 FVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
37-363 |
2.37e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 165.09 E-value: 2.37e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 37 FNLNGSMVvmtliLDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLG 115
Cdd:PRK12647 54 LGVNLSFL-----LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLgLVLSDNLITLFVFWELTS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 116 LVSYCLVIY-YQNVKSYSAGMLTALSNRIGDVAILI------------SIAWMLNFGswnyiyyyDFILGSFEMKVITML 182
Cdd:PRK12647 129 ITSFLLIGFnHEREAARRAALQALLVTGGGGLALLAglillgnvtgtySLSELLASG--------DVIREHPLYLAILLL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 183 IVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCLTMFMAGFGANFE 261
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 262 FDLKKIIALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVC 338
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAA 359
|
330 340
....*....|....*....|....*
gi 326370512 339 FNVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK12647 360 ALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
388-569 |
4.11e-43 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 151.93 E-value: 4.11e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 388 YSFRLFYYSMSGDNNFYSSFSFDDNGYYISFGMIGLLFVAVFGGSLLSWLIFPVPYMISLPYYLKFMTITVVMLGSYLGY 467
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 468 LISKFNFSYNLFSLNFlSFVSFAGSMWFMPFLSTKFISYLPLKMGFYSSKSFDYGWGELLGGQGLYELFIYVIGYVQSWY 547
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 326370512 548 DFNFSIYLLTFIFWMFILVMLF 569
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-365 |
2.06e-42 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 162.71 E-value: 2.06e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLGLVSYCLVIYY 125
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLgVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 126 -QNVKSYSAGMLTALSNRIGDVAILISIAWML----NFGSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWL 200
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 201 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLM 279
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 280 MSILAMGFPKL----------------AFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSS 343
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|..
gi 326370512 344 LSLCGMPFLAGFYSKDLILEMV 365
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEA 410
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-391 |
7.63e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 158.43 E-value: 7.63e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLGLVSYCLVIYY 125
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLgIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 126 QNVKSYSAGMLTALS-NRIGDVAILisiAWMLNFGSwnyiyyydfILGSFEMKVI----------------TMLIVLAAM 188
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALL---AGVLLLGH---------IVGSYDLDVVlaagdlirahplyppaLVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 189 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcGWFLL--LIGCLTMFMAGFGANFEFDLKK 266
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTE-EWFWIvgGAGLITLLLGAYFALFQHDLKG 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 267 IIALSTLSQLGLMMSILAMGFPK---LAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSS 343
Cdd:PRK12648 298 LLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 326370512 344 LSLCGMPFLAGFYSKDL----ILEMVCLSWINCLIFFLYFFSTGLTASYSFR 391
Cdd:PRK12648 377 AAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
182-394 |
1.15e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 152.00 E-value: 1.15e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 182 LIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DTYNCGWFLLLIGCLTMFMAGFGANF 260
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 261 EFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHL---LAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSV 337
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAV 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 326370512 338 CFNVSSLSLCGMPFLAGFYSKDLILEMV----CLSWINCLIFFLYFFSTGLTASYSFRLFY 394
Cdd:PRK12644 367 VAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
182-404 |
1.39e-38 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 151.20 E-value: 1.39e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 182 LIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTY----NcgwFLLLIGCLTMFMAGFG 257
Cdd:CHL00025 232 LLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpyimN---LISLIGIITALLGATL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 258 ANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNL--------KDSQDIRFMGSIV 329
Cdd:CHL00025 309 ALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLR 388
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 326370512 330 NFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMvclSWINCLIF-FLYFFSTGLTASYSFRLFYYSMSGDNNFY 404
Cdd:CHL00025 389 KYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND---SWLYSPIFaIIAWSTAGLTAFYMFRIYLLTFEGHLRVH 461
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
50-363 |
1.13e-36 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 145.67 E-value: 1.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 50 LDWMSLIFMSFVMYISSLVIYYSEDYMFGEK-NINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLGLVSYCLVIY-YQ 126
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIgIVLSDNTILMYVFWELTSVSSFLLISYwYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 127 NVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIY----YYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPA 202
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 203 AMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNC-GWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMS 281
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 282 ILAMG----------FPKL-------AFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSL 344
Cdd:PRK12646 316 MVGIGggyaqhqqdaIASIyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330
....*....|....*....
gi 326370512 345 SLCGMPFLAGFYSKDLILE 363
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLD 413
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
16-484 |
1.14e-36 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 143.10 E-value: 1.14e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 16 IFILGIYYLMVDY-SLFVEWELFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFIL 94
Cdd:MTH00063 8 LLCLLIFFLFLVGvSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 95 SR-YLFMTPPLISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNFGSWNYIyyydfilgs 173
Cdd:MTH00063 88 VMgILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFL--------- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 174 femkvITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCLTMFM 253
Cdd:MTH00063 159 -----CCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 254 AGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIR-----FMGSI 328
Cdd:MTH00063 234 TGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 329 VNFMPLTSVCfnvssLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTGLTASYSFRLFyysmsgdNNFYSSFS 408
Cdd:MTH00063 314 WNLFYLFLLV-----LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLC-------LILFGVKS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 409 FDDNGYYISFGMIGLLfvaVFGGSLLSWLIF-----PVPYMISLPYYLKFMTITVVMLGSYLGYLISKFNFSYNLFSLNF 483
Cdd:MTH00063 382 SLSSGVRFLFFNSGLM---VFLWLFINYYVFllldeVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSSSLFGCDN 458
|
.
gi 326370512 484 L 484
Cdd:MTH00063 459 L 459
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
182-365 |
2.73e-35 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 141.60 E-value: 2.73e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 182 LIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcGWFLL--LIGCLTMFMAGFGAN 259
Cdd:PRK12645 215 LILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQ-VWFWTvtLVGLITLFWGSLNAV 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 260 FEFDLKKIIALSTLSQLGLMMSILAMGFPKL----------------AFFHLLAHALFKALLFMCAGSMIHNlKDSQDIR 323
Cdd:PRK12645 294 KQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIR 372
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 326370512 324 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMV 365
Cdd:PRK12645 373 KLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESM 414
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
31-362 |
1.38e-33 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 133.56 E-value: 1.38e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 31 FVEWELFNLnGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMF-------GEKNINRFIIIVLMFILSRY-LFMTP 102
Cdd:PRK06525 55 AVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAgLVYSS 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 103 PLISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMlnfgswnYIYYYDFILGSF-----EMK 177
Cdd:PRK06525 134 TLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL-------FLQTGTFALSALsglhgSLK 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 178 VITMLIVL-AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTY--NCGWFLLLIGCLTMFMA 254
Cdd:PRK06525 207 YLVFLGILfAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphVIGYVGAVMAIVTLLYG 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 255 GFGANFEFDLKKIIALSTLSQLGLM-----MSIL--AMGFpKLAFFHLLAHALFKALLFMCAGSMIHNLkDSQDIRFMGS 327
Cdd:PRK06525 287 FLMYLPQQDMKRLLAYSTITQLGYMffglsLAILgsRLAL-EGSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRG 364
|
330 340 350
....*....|....*....|....*....|....*
gi 326370512 328 IVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:PRK06525 365 VLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-395 |
1.69e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 127.69 E-value: 1.69e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSedYMFGEKNINRFIIIVLMFI-------LSRYLFMTPPLISILLrwdglgLVSY 119
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLagllgalLTADLFNLFVFLEIMS------LSSY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 120 CLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLNF-GSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSS 198
Cdd:PRK08375 144 ALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHT 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 199 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS------PMLDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALST 272
Cdd:PRK08375 224 WLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 273 LSQLGLMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGM 349
Cdd:PRK08375 304 VSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 326370512 350 PFLAGFYSK-DLILEMVCLSWINCLIFFLyfFSTGLTASYSFRLFYY 395
Cdd:PRK08375 383 PPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-363 |
6.96e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 128.02 E-value: 6.96e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 44 VVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLGLVSYCLV 122
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIgMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 123 IYYQNVKSYSAGMLTALsnRIGDVAILISIAWMLNFGSWNYIYYYDFILGSFEM----------KVITMLIVLAAMTKSA 192
Cdd:PRK12649 152 GYWRHRPESVYGATKSL--LITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplfLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 193 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNcGWFLLL--IGCLTMFMAGFGANFEFDLKKIIAL 270
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 271 STLSQLGLMMSIL--------AMGFPKlAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVS 342
Cdd:PRK12649 309 STISQLAYLMTMYgyttyhepGLGVAA-ATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIA 386
|
330 340
....*....|....*....|.
gi 326370512 343 SLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK12649 387 ALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-311 |
6.37e-25 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 108.63 E-value: 6.37e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 53 MSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIiVLMFILS--RYLFMTPPLISILLRWDGLGLVSYCLVIYYQNVKs 130
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVR-ALAGVLAavHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 131 ysAGMLTA----LSNRIGDVAILISIA-WMLNFGSWNY---IYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPA 202
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 203 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDTYNCG-WFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMS 281
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 326370512 282 ILAMGFPKLAFFHLLAHALFKALLFMCAGS 311
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-363 |
7.77e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 101.57 E-value: 7.77e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 182 LIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLDTYNCGWFLLLIGCLTMFMAGFGANFE 261
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LDVPGLDLIVRIFGVGTALLGVLFALLE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 262 FDLKKIIALSTLSQLGLmmsILAMgfPKLAFFHLLAHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVNFMPLTsvcfnV 341
Cdd:PRK07234 267 KDLKRMLAFSTISQLGF---ILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLT-----M 335
|
170 180
....*....|....*....|..
gi 326370512 342 SSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK07234 336 ASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-394 |
1.59e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 101.20 E-value: 1.59e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMFGE-KNINRFIIIVLMFILSRYLFMTPPLISILLRWDGLGLVSYCLVIYY 125
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHEsGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 126 QNVK-SYSAGMLTALSNRIGDVAILISIAWMLN-FGSWN--------YIYYYDFILGSFEMKVITMLIVLAAMT-----K 190
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 191 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML--DTYNCGWFLLLIGCLTMFMAGFGA-------NF 260
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgISPSLIDFRAALSPILIILGAVSAiigalmmVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 261 EFDLKKIIALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSV 337
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 326370512 338 CFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWINCLIFFLYFFSTgLTASYSFRLFY 394
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
106-368 |
2.35e-22 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 101.12 E-value: 2.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 106 SILLRWDGLGLVSYCLVIYYQNVKS-YSAGMLTALSNRIGDVAILISIAWMlnfgsWNYIYYYDFI------LGSFEMKV 178
Cdd:PRK06521 137 SFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYDFAamraahLSPFWASL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 179 ITMLIVLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS-PMLDTYNCGW--FLLLIGCLTMFMA 254
Cdd:PRK06521 212 VFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLLGAPGWWWgvLVLALGAISAVLG 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 255 GFGANFEFDLKKIIALST-------LSQLGLMMSILAMGFPKLA-------FFHLLAHALFKALLFMCAGSMIHNLKdSQ 320
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TR 369
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 326370512 321 DIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLS 368
Cdd:PRK06521 370 DMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-363 |
3.28e-22 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 100.96 E-value: 3.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDY---MFGEKNINRFIIIVLMFILSRYL-FMTPPLISILLRWDGLGLVSYCL 121
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGvVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 122 VIY-YQNVKSYSAGMLTALSNRIGDVAILISIAWM-LNFGSWnyiyyyDFILGSFEMKVITMLIVLAAMT---KSAQIPF 196
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSF------ELSPLGASAGILSLVFLLLFLGfgiKAGIIPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 197 SSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW--FLLLIGCLTMFMAGFGANFEFDLKKIIALSTL 273
Cdd:PRK08667 225 HKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 274 SQLGLMM--------------SILAMGFPKLAFFHLLAHALFKALLFMCAGSMIHNLKDsQDIRFMGSIVNFMPLTSVCF 339
Cdd:PRK08667 304 ENIGIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....
gi 326370512 340 NVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-394 |
9.72e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 98.35 E-value: 9.72e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 48 LILDWMSLIFMSFVMYISSLVIYYSEDYM---FGEKNINRFIIIVLMFILSRYLFMTPPLISILLRWDGLGLVSYCLVIY 124
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLainNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 125 YQNVKSYSAGmLTALSNRIGDVAILISIAWMLNFGSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAM 204
Cdd:PRK06589 159 TRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAM 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 205 AAPTPVSALVHSSTLVTAGVYLLIR-------FSPMLDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLG 277
Cdd:PRK06589 238 VAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 278 LMMSILAMGFPK---LAFFHLLAHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAG 354
Cdd:PRK06589 318 LALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 326370512 355 FYSKDLILEMVCLS---WINCLIFFLYFFSTGLTASYSFRLFY 394
Cdd:PRK06589 397 FISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS 439
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
139-386 |
2.85e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 97.67 E-value: 2.85e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 139 LSNRIGDVAILISIAWMLNF-GSWNYIYYYDFIL-GSFEMKVITML-IVLAA--MTKSAQIPFSSWLPAAMAAPTPVSAL 213
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtANLDPLTATLLgLALIAgpTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 214 vHSSTLVTAGVYLLIRFSPMLD----TYNcgwFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPK 289
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLAlspvALT---VLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 290 LAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSkdlILEMVCLSW 369
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLW 409
|
250
....*....|....*...
gi 326370512 370 INCLIFFLYF-FSTGLTA 386
Cdd:PRK07390 410 AVSPWLVGVLlLVNALTA 427
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-311 |
1.42e-20 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 95.10 E-value: 1.42e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 36 LFNLNGSMVVMTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINR-FIIIVLMFILSRYLFMTPPLISILLRWdGL 114
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKyFALFTFTTGFASLAWLSGDLRLMALCW-GA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 115 GLVSYCLVIYYQN---VKSYSAGMlTALSNRIGDVAILISIAWM-LNFGSWNY--IYYYDFI--LGSFEMKVITMLIVLA 186
Cdd:PRK08601 135 TLLGLTLLIGLNKgwkVAREAAKI-SGMLFLISWLALALAIVWLfIATGEWQLtsVLSNENLaqLGTWEKTGINLLLILA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 187 AMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCLTMFMaGFGANF-EFDLK 265
Cdd:PRK08601 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLI-GTGISLvQVDYK 291
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 326370512 266 KIIALSTLSQLGLMMSILAMGFPKLAFFHLLAHALFKALLFMCAGS 311
Cdd:PRK08601 292 RQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-365 |
2.87e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 94.39 E-value: 2.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 50 LDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRFIIIVLMFILSRY-LFMTPPLISILLRWDGLGLVSYCLVIYYQNV 128
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLgMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 129 -KSYSAGMLTALSNRIGDVAILISIAwmLNFGSWN-----YIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPA 202
Cdd:PRK08376 168 wEAIEAGIKYMFVGSLASSMVLLGIA--LLYGQYGtlnmaYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 203 AM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQL 276
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 277 GLMM-----SILAMGFPKL----------AFFHLLAHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNV 341
Cdd:PRK08376 324 GYMLlglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLI 402
|
330 340
....*....|....*....|....
gi 326370512 342 SSLSLCGMPFLAGFYSKDLILEMV 365
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYESS 426
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
104-362 |
2.11e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 91.88 E-value: 2.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 104 LISILLRWDGLGLVSYCLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAW-MLNFGSWnyiyyyDFILGSFEMKVITML 182
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSF------AFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 183 IVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmldtyncGWFLLL-IGCltmFMAGFGANF- 260
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIyIGA---AMAVYGVFFa 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 261 --EFDLKKIIALSTLSQLGLMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGSMIHNLKDSqDIRFMGSIVNFMPLT 335
Cdd:PRK12668 259 llENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLT 337
|
250 260
....*....|....*....|....*..
gi 326370512 336 SVCFNVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:PRK12668 338 ALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
182-392 |
3.43e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 87.51 E-value: 3.43e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 182 LIVLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCG----WFLLLIGCLTMFMAGF 256
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWssvlKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 257 GANFEFDLKKIIALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNfMP 333
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR-MP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 326370512 334 LTSVCFNVSSLSLCGMPFLAGFYSKDLILeMVCLSWINCLIFFLYFFSTGLTASYSFRL 392
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
195-393 |
6.56e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 80.51 E-value: 6.56e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 195 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PML--DTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIAL 270
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 271 STLSQLGLM------MSILAMGFpklAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSL 344
Cdd:COG1008 306 SSVSHMGFVllgifaLNPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAAL 381
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 326370512 345 SLCGMPFLAGFYSKDLILEMVCLSWIncLIFFLYFFSTGLTASYSFRLF 393
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWMY 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
17-394 |
6.58e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 6.58e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 17 FILGIYYLMVDYSLFV-EWELFNLNGSMVVMTLILDWMSLIFMSfvmyISSLVIYYSEDYMFGEKNINR---FIIIVLMF 92
Cdd:PRK08668 33 ALPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAM----ISLLVIFSVAFFMVSEKTKNDayfNMFALMSL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 93 ILSRYLFMTPPLISILLRWDGLGLVSYcLVIYYQNVKSYSAGMLTALSNRIGDVAILISIAWMLN-FGSWNYIYYYDFIL 171
Cdd:PRK08668 109 AGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 172 G--SFEMKVI-TMLIVLAAMTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLDTYNC-------- 239
Cdd:PRK08668 188 NdtSTGFALIvFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyr 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 240 -----GWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGS 311
Cdd:PRK08668 267 gvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 312 MIHNLKDSQdIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVcLSWINCLIFFLYFFSTGLTASYSFR 391
Cdd:PRK08668 347 VIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFR 424
|
...
gi 326370512 392 LFY 394
Cdd:PRK08668 425 PLA 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
175-362 |
2.85e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 72.29 E-value: 2.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 175 EMKVITMLIVLAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML---DTYNCGWFLLLIGCLTM 251
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 252 FMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGSMIHnLKDSQDIRFMGSI 328
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGL 362
|
170 180 190
....*....|....*....|....*....|....
gi 326370512 329 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:PRK12663 363 YRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
176-363 |
5.59e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 71.13 E-value: 5.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 176 MKVITMLIVLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW---FLLLIGCLTM 251
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 252 FMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGSMIHnLKDSQDIRFMGSI 328
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190
....*....|....*....|....*....|....*
gi 326370512 329 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-393 |
7.13e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 7.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 181 MLIVLAAmtKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGW----FLLLIGCLTMFMAG 255
Cdd:PRK08676 212 IFIGFLA--KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEqfsnVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 256 FGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKLAF---FHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVNFM 332
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 326370512 333 PLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-EMVCLS-WINCLIFFLYFFSTGLTASYSFRLF 393
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
133-393 |
8.61e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 70.74 E-value: 8.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 133 AGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMA-APTP 209
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 210 VSALVhSSTLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCLTMFMAGFGANFEF---DLKKIIALSTLSQLGLMMSILAMG 286
Cdd:TIGR01972 237 GSVIL-AGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALaqtDIKRLIAYSSISHMGFVLLGIFSF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 287 FP---KLAFFHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILe 363
Cdd:TIGR01972 316 NElgiSGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL- 393
|
250 260 270
....*....|....*....|....*....|
gi 326370512 364 mVCLSWINCLIFFLYFFSTGLTASYSFRLF 393
Cdd:TIGR01972 394 -LGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
194-355 |
1.16e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 70.63 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 194 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYN--CGWFLLLIGCLTMFMAGFGANFEFDLKKIIAL 270
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPlwWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 271 STLSQLGLMMSILAMGFPKLA--------------FFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTS 336
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 326370512 337 VCFNVSSLSLCGMPFLAGF 355
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
189-362 |
2.09e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.57 E-value: 2.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 189 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLD----TYNCGWFLLLIGCLTMFMAGFGANFEFD 263
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDaaigSDFPGRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 264 LKKIIALSTLSQLGLMMSILAMGFPkLAFF----HLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCF 339
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGL 382
|
170 180
....*....|....*....|...
gi 326370512 340 NVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-363 |
6.58e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.07 E-value: 6.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 190 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLDTYNCGW-FLLLIGCLTMFMAGFGANFEFDLKKI 267
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 268 IALSTLSQLGLMMSILAMGFPK---LAFFHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSL 344
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
170
....*....|....*....
gi 326370512 345 SLCGMPFLAGFYSKDLILE 363
Cdd:PRK12665 380 NLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
139-362 |
7.70e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 67.53 E-value: 7.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 139 LSNRIGDVAILISIAWM-----LNFGSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMA-APTPVSA 212
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 213 LvHSSTLVTAGVYLLIRFS-PMLD--TYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLG-LMMSILAMGFP 288
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 326370512 289 KL--AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:PRK05846 327 GIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-358 |
3.03e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 56.28 E-value: 3.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMfGEKNINRFIIIVLM-FILSRYLFMT--PPLISILLRWDGLGLVSYCLV- 122
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLlFATLGMMLMAsaNDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 123 IYYQNVKSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFILGSFEMK---VITMLIVLAAMT-KSAQ 193
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLAfKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 194 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLDTYNCGWFLLL--IGCLTMFMAGFGANFEFDLKKII 268
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 269 ALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLS 345
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 326370512 346 LCGMPFLAGFYSK 358
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
180-363 |
3.89e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 52.13 E-value: 3.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 180 TMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYncgwFLLLIGCLTMFMAGFGAN 259
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 260 FEFDLKKIIALSTLSQLGLMMSILAMGfPKLAFFHLLAHALFKALLFMcagsMIHNLKdSQDIRFMGSIVNFMPLTSVCF 339
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 326370512 340 NVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
176-358 |
1.05e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.27 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 176 MKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------SPMLDTYNCGWFLLLIGC 248
Cdd:PRK12662 208 IQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 249 LTMFMAGFGANFEFDLKKIIALSTLSQLGLMmsILAMGFPK-----LAFFHLLAHALFKALLFMCAGSMIHNLkDSQDIR 323
Cdd:PRK12662 288 LAIVFGSVLAILSKDIKRIFAYSSISHIGYI--ILAVSLNTyyglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLE 364
|
170 180 190
....*....|....*....|....*....|....*
gi 326370512 324 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 358
Cdd:PRK12662 365 DCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-362 |
4.54e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 49.46 E-value: 4.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 181 MLIVLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFS--------PMLDTYNCGWfLLLIGCLTM 251
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLStllfgpeaGASAGFGQDW-LLPGGLATL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 252 FMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGSM---------------- 312
Cdd:PRK12666 291 AFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpe 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 326370512 313 IHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 362
Cdd:PRK12666 371 LYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
180-363 |
1.99e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 46.84 E-value: 1.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 180 TMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYncgwFLLLIGCLTMFMAGFGAN 259
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 260 FEFDLKKIIALSTLSQLGLMMSILAMgFPKLAFFHLLAHALFKALLFMcagsMIHNLKDSQDIRFMGSIVNFMPLTSVcF 339
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSM-M 244
|
170 180
....*....|....*....|....
gi 326370512 340 NVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:MTH00070 245 MLTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
150-396 |
2.59e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 46.50 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 150 ISIAWMLNFGSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 229
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 230 FSPMLDTyncgWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGfPKLAFFHLLAHALFKALLFmca 309
Cdd:MTH00200 145 LAPALNS----NILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 310 gsMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemvclswINCLIFFLYFFSTGLTASYS 389
Cdd:MTH00200 217 --LLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
....*..
gi 326370512 390 FRLFYYS 396
Cdd:MTH00200 288 LSLFFYL 294
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
218-363 |
2.73e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.95 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 218 TLVTAGVYLLIRFSPMLDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFP---KLAFFH 294
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFH 323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 326370512 295 LLAHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-358 |
5.48e-05 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 45.77 E-value: 5.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 51 DWMSLIFMSFVMYISSLVIYYSEDYM-FGEKNINRFIIIVLMFIL-SRYLFMTPPLISILLRWDGLGLVSYCLVIYY-QN 127
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLgGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 128 VKSYSAGMLTALSNRIGDVAILISIAWM--LNFGSWNYIYYYDFILGSFEMKVITMLIVLAAMT-----KSAQIPFSSWL 200
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 201 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDTY-NCGWFLLL--IGCLTMFMAGFGANFEFDLKKIIALSTLSQL 276
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFsSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 277 GLMMSILAMGFPKLAFFHLLAHALFkaLLFMCAGS----MIHNLKDSQD-IRFMGSIVNFMPLTSVCFNVSSLSLCGMPF 351
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 326370512 352 LAGFYSK 358
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-439 |
1.68e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 44.34 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 182 LIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLDTYNCGWFLLLIGCLTMFMAGFGANFE 261
Cdd:PRK12664 149 LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASLE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 262 FDLKKIIALSTLSQLGLMmsILAMGFP-------KLAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNfMPL 334
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLL--IIAIGFSgssgvaiGILILQIVLSVVYQTLLFMVADSVINRTR-KFNLNRVGGLFK-MSL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 335 TSVCFNVSSLSLCGMPFLAGFYSKDLIL-EMVCLSWINCLIFFLY-FFSTGLTASYSFRLFYYSMSGDNNfySSFSFDDN 412
Cdd:PRK12664 299 EAMCCIIAILNMGAFPGTAGFVSKSLIThSIDTAGLTLVLYKKLFlICSLLLFASVGLKFFWYAFISKSK--SKPEAEKV 376
|
250 260
....*....|....*....|....*..
gi 326370512 413 GYYISFGMIGLLFVAVFGGSLLSWLIF 439
Cdd:PRK12664 377 YIGSKLSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
105-363 |
2.76e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 105 ISILLRWDGLGLVSYCLVIYYQNvKSYSAGMLTALSNrigdvailISIAWMLNFGSWNYIYYYDFILGSFEMKVITMLIV 184
Cdd:PRK06459 95 LLFLAGWEIMTIPSYVAIALTKK-NKRPAFVFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILAS 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 185 LAAMTKSAQIPF--SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDTYNCGWF---LLLIGCLTMFMAGFGAN 259
Cdd:PRK06459 166 FGFIIKMGMMPFlvSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAY 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 260 FEFDLKKIIALSTLSQLGLMMSILAM------------GFPKLA-FFHLLAHALFKALLFMCAGSMihnlkDSQDIRFMG 326
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGAILVALGLymvtkqlitsieHFSLITvILYSFAHSVAKTGLFLSSGLQ-----EKQSITYSK 320
|
250 260 270
....*....|....*....|....*....|....*..
gi 326370512 327 SIVNFMplTSVCFNVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK06459 321 KIRNRW--IELGLTLLASSLSGLLPNIGGVASWLLLE 355
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
143-427 |
3.09e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.37 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 143 IGDVAILISIAWMLNF-GSWNYIYYY--DFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTL 219
Cdd:MTH00226 193 IGSVLMLLCLFSLYNIhGTTDYLTLAscSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 220 VTAGVYLLIRFS-PM--LDTYNCGWFLLLIGCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILA----MGFPKlAF 292
Cdd:MTH00226 273 LKLGGYGLVRLSwPIlpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVthdiIGLTG-SI 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 293 FHLLAHALFKALLFMCAgSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeMVCLSWiNC 372
Cdd:MTH00226 352 FIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI-LSSFNW-NP 428
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 326370512 373 LIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDN--GYYISFGMIGLLFVA 427
Cdd:MTH00226 429 IIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNrrEFYITASMVFFAFLI 485
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-358 |
4.14e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.89 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 47 TLILDWMSLIFMSFVMYISSLVIYYSEDYMfGEKNINRFIIIVLMFILSRYLFMTP-PLISILLRWDGLGLVSYCLVIY- 124
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSAnDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 125 YQNVKSYSAGM----LTALSNRIgdvaILISIAWMLNF-GSWNYIYYYDFILGSFEMKVI----TMLIVLAAMTKSAQIP 195
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGAtGSLSFAGIAKALADGSGNSLLllfgLVFLLVGLAFKLSAVP 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 196 FSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLDTYNCGW---FLLLIGCLTMFMAGFGANFEFDLKKIIALS 271
Cdd:PRK05777 223 FHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 272 TLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCG 348
Cdd:PRK05777 302 SIAHAGYLLVGLAAGTAegySAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330
....*....|
gi 326370512 349 MPFLAGFYSK 358
Cdd:PRK05777 382 IPPTAGFWGK 391
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
190-357 |
5.33e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.71 E-value: 5.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 190 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDTYNCGWF---LLLIGCLTMFMAGFGANFEFDLK 265
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDAHVYFapaLAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 266 KIIALSTLSQLGLMM----SILAMGFPKlAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNV 341
Cdd:PRK12561 277 RRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTYERTH-TLSIPNMGGLAKVMPKTFALFTA 354
|
170
....*....|....*.
gi 326370512 342 SSLSLCGMPFLAGFYS 357
Cdd:PRK12561 355 SSMASLALPGMSGFVS 370
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
173-363 |
1.46e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 41.24 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 173 SFEMKVITM-LIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLDTYNCGWFLL-----LI 246
Cdd:PRK07363 200 SLNTQLILLtGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaII 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 247 GCLTMFMAGFGANFEFDLKKIIALSTLSQLGLMMSILAMGFPKL---AFFHLLAHALFKALLFMCAGsMIHNLKDSQDIR 323
Cdd:PRK07363 278 GTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLD 356
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 326370512 324 FMGSIVN---FMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 363
Cdd:PRK07363 357 VLNGLMNpirGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
194-361 |
2.01e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.84 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 194 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSpmLDTYNCGW-----FLLLIGCLTMFMAGFGANFEFDLKKI 267
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSVLYGASCAIAQKDMKKM 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 268 IALSTLSQLGLMMSILAMGFP---KLAFFHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVN---FMPLTSVCFNV 341
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMIL 377
|
170 180
....*....|....*....|
gi 326370512 342 SSLSLCGMPFLAGFYSKDLI 361
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
5.10e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 35.10 E-value: 5.10e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 326370512 46 MTLILDWMSLIFMSFVMYISSLVIYYSEDYMFGEKNINRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
143-426 |
8.28e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 8.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 143 IGDVAILISIAWMLNF-GSWNYIYYYDFILGSFEMKVITMLIVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 221
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 222 AGVYLLIRFSPMLDTYNCGWFLLLIGCLTMFMAGFGANF---EFDLKKIIALSTLSQLGLM-MSILAMGFPKL--AFFHL 295
Cdd:MTH00217 251 LGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTtcrQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326370512 296 LAHALFKALLFMcAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFlagfySKDLILEMVCL------SW 369
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL-----SCNFVGEFLSLlaafeySY 404
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 326370512 370 InclIFFLYFFSTGLTASYSFRLFYYSMSGDNNFYSSFSFDDN--GYYISFGMIGLLFV 426
Cdd:MTH00217 405 I---VGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNrrEFYVLLPLVFLIYL 460
|
|
| |
