|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-462 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 674.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 81 QNHLQHEPPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 161 LVAILYLHSQMGTLHLPTLKLTPhllpPSSTNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTH----PTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 241 KLGGYGLMRITFLTNPsPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00124 237 KLGGYGIIRITLLLPP-LSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILL 400
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 325126686 401 TGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELISGP 462
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-463 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 550.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 81 QNHLQHEPPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 161 LVAILYLHSQMGTLHLPTLKLTPHLLPPSstnhWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNS----WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 241 KLGGYGLMRITFLTNPSpSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00110 237 KLGGYGMMRITIILNPL-TEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILL 400
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 325126686 401 TGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELISGPL 463
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 541.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 81 QNHLQHEPPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 161 LVAILYLHSQMGTLHLPTLKLTPHLLPPSSTNhwstLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTN----KIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 241 KLGGYGLMRITFLTNPSPSNLLhYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELS-YPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILL 400
Cdd:MTH00068 316 MISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 325126686 401 TGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELISG 461
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
1.81e-158 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 456.72 E-value: 1.81e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLA-PSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 80 SQNHLQHEPPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 160 LLVAILYLHSQMGTLHLptlkLTPHLLPPSSTNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSM----LTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 240 LKLGGYGLMRITFLTNPSpSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMI 319
Cdd:MTH00127 237 LKLGGYGMMRMMVMLDPL-TKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 320 LMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTIL 399
Cdd:MTH00127 316 LMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 325126686 400 LTGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELISG 461
Cdd:MTH00127 396 LTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-459 |
1.54e-146 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 425.89 E-value: 1.54e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 3 KIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLAPSY-YPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 82 NHLQHEPPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 162 VAILYLHSQMGTLHLPtlkltphLLPPSSTNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLY-------ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 242 LGGYGLMRITFLTNPSpSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILM 321
Cdd:MTH00206 234 LGGYGMMRIILILGPS-TKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 322 ISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILLT 401
Cdd:MTH00206 313 IAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 325126686 402 GTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELI 459
Cdd:MTH00206 393 GLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
1.39e-126 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 375.08 E-value: 1.39e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLAPSYY-PYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 80 SQNHLQHEPPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 160 LLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTNHWSTLFLnmalLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFC----ILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 240 LKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMI 319
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 320 LMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTIL 399
Cdd:MTH00044 317 LMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFP 396
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 325126686 400 LTGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELIS 460
Cdd:MTH00044 397 IIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
2.18e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 317.87 E-value: 2.18e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPtalLSPPKFMWtNTTMHSLLIATLSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSW-WLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 81 QNHLQHEPPTRKRIFTATLITVqpFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 161 LVAILYLHSQMGTLHLPTLKLtphllppsstNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF----------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 241 KLGGYGLMRITFLTNPSpSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00163 225 KLGGYGLLRVMSFFSKL-GLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLM 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILL 400
Cdd:MTH00163 304 MIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIF 383
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 325126686 401 TGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMI 443
Cdd:MTH00163 384 LMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLF 426
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
1.96e-96 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 297.81 E-value: 1.96e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPpKFMWTNTTMHSLLIATLSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 81 QNHLQHEppTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 161 LVAILYLHSQMGTLHLPTLKLTPHLLPPSStnhwstlFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLMN-------LWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 241 KLGGYGLMRITFLTnPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00014 231 KLGGYGLLRMSSLF-MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILL 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 401 TGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELIS 460
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-459 |
6.71e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 293.81 E-value: 6.71e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 8 TMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLASQNHLqhE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF--K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 88 PPTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYL 167
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 168 HSQMGTLHLptlkltpHLLPPSSTNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGL 247
Cdd:MTH00205 163 NSLNFSLSM-------FFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 248 MRIT---FLTNPSPSNLlhypFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISH 324
Cdd:MTH00205 236 IRITsmlYKLNSNFSEL----FFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAH 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 325 GLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILLTGTA 404
Cdd:MTH00205 312 GLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLI 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 325126686 405 TLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLILKPELI 459
Cdd:MTH00205 392 SFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-461 |
1.58e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 289.05 E-value: 1.58e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 37 LSLQWLAPSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLASQNHLQHEPPTRKRIFTATLITVqpFIILAFSTTELM 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 117 MFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLptlkLTPHLLPPSSTNHWst 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM----LLISSLRKLLSSMG-- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 197 lFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYpFITLALWGALM 276
Cdd:MTH00150 153 -LWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIF-LISLSLWGGVL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 277 TSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPL 356
Cdd:MTH00150 231 TSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLML 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 357 LPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILLTGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTT 436
Cdd:MTH00150 311 YPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKS 390
|
410 420
....*....|....*....|....*
gi 325126686 437 REHLLMILHLLPTLLLILKPELISG 461
Cdd:MTH00150 391 SEMLLLLLHWVPLLLLILKSDLLFM 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-398 |
2.78e-71 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 227.58 E-value: 2.78e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 113 TELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTN 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 193 HWSTLFLnmalLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSpSNLLHYPFITLALW 272
Cdd:pfam00361 82 LLLFLLI----LVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPS-SPFIQQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 273 GALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRTLLLAQ 351
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYG 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 325126686 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTI 398
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
54-391 |
2.57e-58 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 199.54 E-value: 2.57e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 54 PWI---------GTDQTSSPLLVLSCWLLPLMLLASQNHLQHepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEA 124
Cdd:COG1008 67 PWIpslgisyhlGVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWEL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 125 TLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVAILYL--HSQMGTLHLPTLKLTPhlLPPSsTNHWstLFLnmA 202
Cdd:COG1008 143 MLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALyfLAGALTFDIAELAAAP--LPLT-AQLL--LFL--A 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 203 LLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICL 282
Cdd:COG1008 215 FFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVAL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 283 RQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAT 362
Cdd:COG1008 295 AQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAA 374
|
330 340
....*....|....*....|....*....
gi 325126686 363 WWLLANLTNMALPPTTNLMAELNIMIALF 391
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAF 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-391 |
1.49e-54 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 189.64 E-value: 1.49e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 56 IGTDQTSSPLLVLSCWLLPLMLLASQNHLQheppTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK05846 78 LGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 136 WGnQPERLSAGIYLLFYTLISSLPLLVAILYL----HSQMGTLHLPTLKLTPhlLPPSsTNHWstLFLnmALLTAFMVKA 211
Cdd:PRK05846 154 WG-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLP--LPPG-VQYW--LFL--AFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLI 291
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 292 AYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTN 371
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340
....*....|....*....|
gi 325126686 372 MALPPTTNLMAELNIMIALF 391
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSF 405
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
56-391 |
1.21e-53 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 186.68 E-value: 1.21e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 56 IGTDQTSSPLLVLSCWLLPLMLLASQNHLQHepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 136 WGNqPERLSAGIYLLFYTLISSLPLLVAILYLHSQMG-TLHLPTLKLTPHllpPSSTNHWstLFLnmALLTAFMVKAPLY 214
Cdd:TIGR01972 149 WGG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPL---PFGVQTW--LFL--AFFIAFAVKVPLF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYS 294
Cdd:TIGR01972 221 PLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 295 SVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMAL 374
Cdd:TIGR01972 301 SISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
330
....*....|....*..
gi 325126686 375 PPTTNLMAELNIMIALF 391
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSF 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-438 |
2.86e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 173.18 E-value: 2.86e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 59 DQTSSPLLVLSCWLLPLMLLASQNHLQHepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLlPPSSTNHWstLFLNMALltAFMVKAPLYGLHL 218
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHV-VSEQTQKW--IFLGIFL--AMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSH 298
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 299 MGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTT 378
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 325126686 379 NLMAELNIMIALFNWsNPTILLTGTATLLTAS-YTLFMLTTTQRGIPSPHITALQNSTTRE 438
Cdd:MTH00226 412 NFIGEYLSILSSFNW-NPIIGVFVCSGVILSAvYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
59-463 |
5.34e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 171.78 E-value: 5.34e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 59 DQTSSPLLVLSCWLLPLMLLASQNHLQHepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRWGN 138
Cdd:MTH00204 82 DGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHllpPSSTNHWstLFLNMALltAFMVKAPLYGLHL 218
Cdd:MTH00204 158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKL---PLSIQKW--LLVGFFL--SLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLAL----WGALMTSsiclRQVDLKSLIAYS 294
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSViaviYGSLTTC----RQVDFKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 295 SVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMAL 374
Cdd:MTH00204 307 SVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 375 PPTTNLMAELNIMIALFNWSNPTILLTGTATLLTASYTLFMLTTTQRGIPSPHITALQNSTTREHLLMILHLLPTLLLIL 454
Cdd:MTH00204 387 PLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGI 466
|
....*....
gi 325126686 455 KPELISGPL 463
Cdd:MTH00204 467 VPFIIIDLV 475
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-394 |
4.74e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 158.29 E-value: 4.74e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 57 GTDQTSSPLLVLSCWLLPLMLLASQNHLQHepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 137 GNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLH---LPTLKLTPHLlppsstnhwsTLFLNMALLTAFMVKAPL 213
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDyqaLCCLKIEKEL----------QYFIFLGFFLSLAIKIPK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHyPFI-TLALWGALMTSSICLRQVDLKSLIA 292
Cdd:MTH00217 223 IPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFS-PLIqTLSLLAIIYGSLTTCRQVDLKRIIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 293 YSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNM 372
Cdd:MTH00217 302 YSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANA 381
|
330 340
....*....|....*....|..
gi 325126686 373 ALPPTTNLMAELNIMIALFNWS 394
Cdd:MTH00217 382 SIPLSCNFVGEFLSLLAAFEYS 403
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
105-417 |
9.90e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 144.66 E-value: 9.90e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 105 FIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVaiLYLHSQMgtlhlptlkltph 184
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF--VYLKNFF------------- 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 185 LLPPSSTNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLlhy 264
Cdd:MTH00094 139 FFSLCYFDFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNF--- 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 265 pFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHS 344
Cdd:MTH00094 216 -WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKS 294
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 325126686 345 RTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPTILLTGTATLLTASYTLFMLT 417
Cdd:MTH00094 295 RLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
59-392 |
9.32e-35 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 134.50 E-value: 9.32e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 59 DQTSSPLLVLSCWLLPLMLLASQNHLQHEppTRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITrWGN 138
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTnhwSTLFLnmALLTAFMVKAPLYGLHL 218
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL---LAAFA--LLLVGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLT-NPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVS 297
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 298 HMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330
....*....|....*
gi 325126686 378 TNLMAELNIMIALFN 392
Cdd:COG0651 387 SGFVSKWLLLQAALE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
56-390 |
2.44e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 125.91 E-value: 2.44e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 56 IGTDQTSSPLLVLSCWLLPLMLLASQNhLQHEPptrkRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 136 WGNQpERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLhlpTLKLTPhlLPPSSTNHWSTLFLNMALLTAFMVKAPLYG 215
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTF---TFDLAE--LGAKSYPLALELLLYAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLA----LWGALMTssicLRQVDLKSLI 291
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGvvniIYGALNA----FAQDNVKRRL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 292 AYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHsrTLLLAQ--GLQPLLPLMATWWLLANL 369
Cdd:PRK12561 280 AYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTH--TLSIPNmgGLAKVMPKTFALFTASSM 357
|
330 340
....*....|....*....|.
gi 325126686 370 TNMALPPTTNLMAELNIMIAL 390
Cdd:PRK12561 358 ASLALPGMSGFVSELTVFLGI 378
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
54-392 |
3.22e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 119.80 E-value: 3.22e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 54 PWI---------GTDQTSSPLLVLSCWLLPLMLLASQNHLQhepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEA 124
Cdd:PRK06473 64 PWIdslglsyhlGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYEL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 125 TLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTnhwstLFLNMALL 204
Cdd:PRK06473 139 ELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQ-----LLLLAPIL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 205 TAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLRQ 284
Cdd:PRK06473 213 VGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 285 VDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGL---QPLLPLMA 361
Cdd:PRK06473 293 KDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITG 372
|
330 340 350
....*....|....*....|....*....|.
gi 325126686 362 TWWLLANLTNMALPPTTNLMAELNIMIALFN 392
Cdd:PRK06473 373 SLMILGVMASAGIPGMVGFIAEFLVFRGSFP 403
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-390 |
1.20e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 112.49 E-value: 1.20e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 45 SYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLASQnhlqhePPTRK-RIFTATLITVQPFIILAFSTTELMMFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 124 ATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTnhwstLFLNMAL 203
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-----LLCYAGL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 204 LTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLR 283
Cdd:PRK02546 220 LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 284 QVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATW 363
Cdd:PRK02546 300 QRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAM 379
|
330 340
....*....|....*....|....*..
gi 325126686 364 WLLANLTNMALPPTTNLMAELNIMIAL 390
Cdd:PRK02546 380 WTACSLASLALPGMSGFVAELMVFVGF 406
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
9.14e-25 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 98.37 E-value: 9.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 1 MLKIILPTMMLLPTALLSPPKFMWTNTTMHSLLIATLSLQWL-APSYYPYKNLTPWIGTDQTSSPLLVLSCWLLPLMLLA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLnNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 325126686 80 SQNHLQHEPPTRKRIFTATLITVQPFIILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-384 |
1.28e-22 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 100.40 E-value: 1.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 110 FSTTELMMFYISFEATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVAILYL---HSQMGTLHLPTLKLTPHLL 186
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLANQSYPV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 187 PPSstnhwstLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPsnllHYPF 266
Cdd:CHL00011 208 ALE-------ILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHA----HSIF 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 267 IT-LALWGALM---TSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERT 342
Cdd:CHL00011 277 SPwLVIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 325126686 343 hsRTLLLAQ--GLQPLLPLMATWWLLANLTNMALPPTTNLMAEL 384
Cdd:CHL00011 357 --RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAEL 398
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
56-383 |
7.66e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 97.86 E-value: 7.66e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 56 IGTDQTSSPLLVLSCWLLPLMLLASQNHLQhepptRKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK07363 75 LGVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 136 WGNQpERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTnhwstLFLNMALLTAFMVKAPLYG 215
Cdd:PRK07363 150 WGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQ-----LILLTGLLLGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHypfITLALWGA---LMTSSICLRQVDLKSLIA 292
Cdd:PRK07363 224 LHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVA---PGLAIIGTisvIYGALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 293 YSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGL-QPL--LPLMATWWLLANL 369
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGM 380
|
330
....*....|....
gi 325126686 370 TNMALPPTTNLMAE 383
Cdd:PRK07363 381 ASAGIPGLVGFVAE 394
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
32-376 |
5.16e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 89.65 E-value: 5.16e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 32 LLIATLSLQWLAPSY-----YPYKNLTPWIG----TDQTSSPLLVLSCWLLPLMLLASQNHLQHEppTRKRIFTATLITV 102
Cdd:PRK12667 45 TLILSILLFIQVYSSnkpivYLFGGWPAPIGivyeVDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 103 QPFIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLT 182
Cdd:PRK12667 123 EAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAK 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 183 PHLLPPSSTNH------WSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNP 256
Cdd:PRK12667 203 IRGLSFPLTGGlagnppLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 257 SPSNLLHYPF------ITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSM 330
Cdd:PRK12667 283 ISPSLIDFRAalspilIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSL 362
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 325126686 331 LFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12667 363 LFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-391 |
2.08e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 84.55 E-value: 2.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 109 AFSTTELMMFYISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLkltPHLLPP 188
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL---AGALAE 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 189 SSTnhwstLFLNMAL-LTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFL---TNPSPSNLLHY 264
Cdd:PRK08375 198 NPT-----VVTAFGFvLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfgGDFRFALGLGW 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 265 PFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHS 344
Cdd:PRK08375 273 LLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGT 352
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 325126686 345 RTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALF 391
Cdd:PRK08375 353 RRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-389 |
2.11e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 68.99 E-value: 2.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 89 PTRKRIFTATLITVQPFIILAFS-------TTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTlISSLPLL 161
Cdd:PRK12662 99 PNRKEISVNKIPSFYSAFLLCLGgllgilvSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 162 VAILYLHSQMGTLHLPTLKLTPHLLPPSSTNHWSTLFLNMALLtafmVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:PRK12662 178 IGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLF----IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTK 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 242 LGGYGLMRITFLTNPSPSNLLHYPF----ITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGA 317
Cdd:PRK12662 254 VMIYLIIRIVYDVFKANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAA 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 325126686 318 MILMISHGLTSSMLFCLANT---NYERTHSRTLLlaqGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIA 389
Cdd:PRK12662 334 VAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
95-391 |
9.42e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 67.06 E-value: 9.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 95 FTATLITVQPFIILAFSTTELMMFYisfEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTL 174
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 175 HLPTLKLTPHLLPpsstnhwstlFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRitFLT 254
Cdd:PRK08667 193 ELSPLGASAGILS----------LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLM 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 255 N-PSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAAcmIQTYWSFS-------------GAMIL 320
Cdd:PRK08667 261 DvLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMG--IGLYVIFGvygldtlallalgGALFH 338
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 325126686 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALF 391
Cdd:PRK08667 339 SLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
105-349 |
1.76e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 65.71 E-value: 1.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 105 FIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLptlkltph 184
Cdd:MTH00062 83 FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF-------- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 185 LLPPSSTNHWSTLFLNMALLtaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTnpSPSNLLHY 264
Cdd:MTH00062 155 SDWGSDDSVSLIVYYVLSFM--FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI--FSGSFLGY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 265 PFITLALWGALMTSSicLRQVDLKSLIAYSSVSHMglVIAACMIQTYWSFSGAMILMIS--HGLTSSMLFCLANTNYERT 342
Cdd:MTH00062 231 LFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVS 306
|
....*..
gi 325126686 343 HSRTLLL 349
Cdd:MTH00062 307 GSRNWVL 313
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-389 |
1.89e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 66.15 E-value: 1.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 108 LAFSTTELMMFYISFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 188 PSSTNhwsTLFLnmALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSnllhypFI 267
Cdd:PRK12665 205 SGTRT---ALFA--VLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG------LD 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 268 TLALWGALMTSSI----CLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK12665 274 TLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAG 353
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 325126686 344 SRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIA 389
Cdd:PRK12665 354 SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
203-392 |
7.93e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 63.80 E-value: 7.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 203 LLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYP-FITLALWGALMTSSIC 281
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRlLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 282 LRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMA 361
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
170 180 190
....*....|....*....|....*....|.
gi 325126686 362 TWWLLANLTNMALPPTTNLMAELNIMIALFN 392
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLA 410
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-377 |
1.54e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.09 E-value: 1.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 110 FSTTELMMFYISFEATLIPTLILITrWGNQPERLSAGIYLLFyTLISSLPLLVAILYLHSQMGTLHLPtlKLTPHLLPPS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFA--DISQGLINDT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 190 STNhwSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGS---------MLLAALLLKLGGYGLMRI-TFLTNPSPS 259
Cdd:PRK08668 191 STG--FALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSavlsgqlskLGAYGFLLVLYVLPGTKLfSEFGTYRGV 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 260 NLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK08668 269 PLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVI 348
|
250 260 270
....*....|....*....|....*....|....*...
gi 325126686 340 ERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:PRK08668 349 YRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPM 386
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-393 |
1.27e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.97 E-value: 1.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 91 RKRIFTATLITVQPFIILAFSTTELMMFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQ 170
Cdd:PRK07234 92 KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 171 MGTLHLPTLKLTPHLlppsstnhwsTLFLnmaLLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRI 250
Cdd:PRK07234 171 NGTFAFSGLATADPE----------AFAL---IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 251 TFLtnpspSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIqtywsfsgAMILMISHGLTSSM 330
Cdd:PRK07234 238 ALD-----VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKST 304
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 325126686 331 LFCLANTNYERTHSRTLLLAQGLQPLLPLmatwwLLANLTNMALPPTTNLMAELNIMIALFNW 393
Cdd:PRK07234 305 LFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPW 362
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-392 |
2.20e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 59.40 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 155 ISSLPLLVAILYLHSQMGTLHLPTL-KLTPHLLPPSSTNHWSTLFLNMAlltafmVKAPLYGLHLWLPKAHVEAPIAGSM 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIaQLAGTIDPTVAQVGLALLIFGLA------VEAELFPLNAWAPDAYQAAPHPITV 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 234 LLAALLLKLGGYGLMRITFL--TNPSPSNLLHYpFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTY 311
Cdd:PRK08377 243 MFSAFVVKAGLYAMARILYLmqNANGWSSVLKL-VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 312 WSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALF 391
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGL 401
|
.
gi 325126686 392 N 392
Cdd:PRK08377 402 S 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
106-375 |
3.95e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.00 E-value: 3.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 106 IILAFSTtelMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHL 185
Cdd:PRK12646 126 IVLSDNT---ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADH 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 186 LppsSTNHWSTLFLNMALLTAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGLMrITFLTNPSPSNLLHYP 265
Cdd:PRK12646 203 I---KNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLL-FRFTPLLGLSNMYIYI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 266 FITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAAC-------------MIQTY-WSFSGAMILMISHGLTSSML 331
Cdd:PRK12646 277 VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyaqhqqdaIASIYvFVLFAALFHLMNHAIFKCAL 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 325126686 332 FCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALP 375
Cdd:PRK12646 357 FMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-397 |
4.86e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 58.29 E-value: 4.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 106 IILAFSTTELMMFyISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPL-LVAILYLHSQMGTLHLPTLKLTph 184
Cdd:PRK06589 130 VLIALSSDLFTMF-VCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLF-- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 185 llppsSTNHWSTLFLnmaLLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITF----LTNPSPSN 260
Cdd:PRK06589 206 -----SKNQSIILLL---MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLyifgLSYLQRIF 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 261 LLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06589 278 AEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYS 357
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 325126686 341 RTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFNWSNPT 397
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
106-390 |
5.17e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.23 E-value: 5.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 106 IILAFSTTELMMFYISFEATLIPTLILITRWgNQPERLSAGIYLLFYTLISSLPLLVAILYLHS------QMGTLHLPTL 179
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLFSltrqalGTGTLNWTEL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 180 KLTPHLLPPSSTNHWSTLFLnmallTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSP- 258
Cdd:PRK08676 194 AAHASLLSPSVLGASFLFIF-----IGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGa 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 259 ----SNLLhypfITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCL 334
Cdd:PRK08676 269 aeqfSNVL----IGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFS 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 325126686 335 ANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIAL 390
Cdd:PRK08676 345 AGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-332 |
1.15e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.47 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 115 LMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTNHW 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 195 STLFLnmalLTAFMVKAPLYGLHLWLPKAhVEAPI-------------AGSMLLaalllklggyglMRITFLTNPSPsnL 261
Cdd:COG1009 213 ILLLL----LLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhaatmvkAGVYLL------------ARLSPLFALSP--V 273
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 325126686 262 LHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSfsgAMILMISHGLTSSMLF 332
Cdd:COG1009 274 WLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVA---ALFHLLTHAFFKALLF 341
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
114-377 |
1.65e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.98 E-value: 1.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 114 ELMMFYISFEATLIPTLILITRWGNQPErlSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLkltphLLPPSSTNH 193
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI-----LHSDVWAEK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 194 wSTLFLNMALLTAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPsnLLHYPFITLAL 271
Cdd:PRK12650 204 -PGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA--VWNWLLIIVGM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 272 WGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQ 351
Cdd:PRK12650 281 ITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
|
250 260
....*....|....*....|....*.
gi 325126686 352 GLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:PRK12650 361 SLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-392 |
5.63e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.10 E-value: 5.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 111 STTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSS 190
Cdd:PRK08376 139 ITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVV 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 191 TNHWSTLFlnmalLTAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPF--IT 268
Cdd:PRK08376 219 AKIALALF-----IAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWviII 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 269 LALWGALMTSSICLRQVDLKSLIAYSSVSHMGLV-------IAACMIQTYWSF-----SGAMILMISHGLTSSMLFCLAN 336
Cdd:PRK08376 293 LGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglgvgLAALGDPAMASYgeialAGGIYHIVNHALYKALLFLTAG 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 325126686 337 TNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIM--IALFN 392
Cdd:PRK08376 373 AVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-391 |
1.47e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 53.80 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 106 IILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFyTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHL 185
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISVKIAE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 186 LPPSSTNHWSTLFlnMALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYP 265
Cdd:PRK07691 200 LSAGQTGLITVVA--ILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYL 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 266 FITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK07691 278 ILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTT 357
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 325126686 346 TLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALF 391
Cdd:PRK07691 358 DLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
91-392 |
4.78e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 51.87 E-value: 4.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 91 RKRIFTATLITVQPFIILAF----STTELMMFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLpLLVAIL 165
Cdd:TIGR01770 96 KEKINKFEFYILLLFALLGIfllvSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGIS 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 166 YLHSQMGTLHLPTLKLTPHLLPPSSTNhwstLFLNMAL-LTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 244
Cdd:TIGR01770 175 LIYGFTGSLNFEDLLLFLSNGMLNISL----LLLGIVLiLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIF 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 245 YGLMRITFLTNPSPSNLLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISH 324
Cdd:TIGR01770 251 AVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIY 330
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 325 GLTSSMLF-CLANT-NYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPTTNLMAELNIMIALFN 392
Cdd:TIGR01770 331 ALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
104-376 |
1.02e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.10 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 104 PFIIL-------AFSTTELMMFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHL 176
Cdd:PRK12663 112 PFILLlmagvigSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 177 PTLKLTPHLLPPSSTnhwsTLFLNMALLTAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFLTNP 256
Cdd:PRK12663 191 AHIAMRLNDMGDTAT----LTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 257 SPSNLLHyPFITLALWGALMTSSI-CLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK12663 266 QERELLH-PLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIA 344
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 325126686 336 NTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12663 345 GSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-328 |
1.72e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.11 E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 75 LMLLASQNHLQHEPPTRKRIFTATLITVQPFIILAfSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 154 LISSLpLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTnhwsTLFLNMAL-LTAFMVKAPLYGLHLWLPKAHVEAPIAGS 232
Cdd:COG1007 164 LSSGF-LLYGISLLYGATGSLNLAGIAAALAAGGANSP----LLLLGLVLvLAGLAFKLSAVPFHMWTPDVYEGAPTPVT 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 233 MLLAALLLKLGGYGLMRITFLTNPSPSNLLHYPFITLA----LWGALMTssicLRQVDLKSLIAYSSVSHMGLVIAACMI 308
Cdd:COG1007 239 AFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAA 314
|
250 260
....*....|....*....|
gi 325126686 309 QTYWSFSGAMILMISHGLTS 328
Cdd:COG1007 315 GTPLGVSAALFYLLAYLFMN 334
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
266-377 |
2.05e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 50.30 E-value: 2.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 266 FITLALWGA---LMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERT 342
Cdd:PRK12647 259 QTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHET 338
|
90 100 110
....*....|....*....|....*....|....*
gi 325126686 343 HSRTLLLAQGLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:PRK12647 339 GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPL 373
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-332 |
3.54e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 49.31 E-value: 3.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 105 FIILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLkLTPH 184
Cdd:MTH00020 123 LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV-FNMV 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 185 LLPPSSTNHWSTLFLnmalLTAFMVKAPLYGLHLWLPKAhVEAPIAGS-MLLAALLLKLGGYGLMRITFLTNPSPSNLLh 263
Cdd:MTH00020 202 VSAPSSDITLICLFL----FIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLFEQAPLALI- 275
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 325126686 264 yPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYwsfSGAMILMISHGLTSSMLF 332
Cdd:MTH00020 276 -IVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHY---SISLFHLMNHAFFKALLF 340
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-376 |
2.50e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.51 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 108 LAFSTTELMMFyISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTL-KLTPHLL 186
Cdd:PRK06525 129 LVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsGLHGSLK 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 187 ppsstnhwSTLFLnmALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGLM-RITFLTNPSPsnllhyp 265
Cdd:PRK06525 207 --------YLVFL--GILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLHAASMVKVGVYIFaRAIQSMGPIP------- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 266 fITLALWGALMTSSICLR-------QVDLKSLIAYSSVSHMGLVIAACMIQTYWS---FSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK06525 269 -HVIGYVGAVMAIVTLLYgflmylpQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlaLEGSIAYIFNHAFAKSLFFLVA 347
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 325126686 336 NTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06525 348 GALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-378 |
3.11e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.49 E-value: 3.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 59 DQTSSPLLVLSCWLLPLMLLASQNHLQHEPPTRKRIFTATLITvqpFIILAFSTTE-LMMFYISFEATLIPTLILITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFT---FLMMVLVTSDnYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 138 NQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKlTPHLLPPSSTNHWSTLFLNMALLTAFMV-------- 209
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFN-GGSVGSGIMDRGYYGGGAYESPLAPFAIigilllig 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 210 ---KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGLMRITF-LTNPSPSNLLhypfiTLALWGAL---MTSSICL 282
Cdd:MTH00032 235 cigKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSFpLFEKAPLTLL-----IITIFGALtafFAATVGL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 283 RQVDLKSLIAYSSVSHMGLVIAACMIQTywSFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRTLllaQGLQPLL 357
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSI 383
|
330 340
....*....|....*....|.
gi 325126686 358 PLMATWWLLANLTNMALPPTT 378
Cdd:MTH00032 384 PFTYTMMLIGSFSIMGLPYLT 404
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
194-376 |
6.63e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 45.26 E-value: 6.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 194 WSTLFLNMALLtAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGLMRITFltnpspsNLLHYP-----FIT 268
Cdd:PRK06521 208 WASLVFLLALF-GFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVF-------DLLGAPgwwwgVLV 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 269 LALWG--ALMTSSICLRQVDLKSLIAYSSVSHMGLVIAA---CMI-QTY-------WSFSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK06521 280 LALGAisAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfIAYgmpllaaLALTAALYHLLNHALFKSLLFLGA 359
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 325126686 336 NTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06521 360 GAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
261-376 |
7.01e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.02 E-value: 7.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 261 LLHYPFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06277 264 SAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSY 343
|
90 100 110
....*....|....*....|....*....|....*.
gi 325126686 341 RTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
282-328 |
3.10e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.89 E-value: 3.10e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 325126686 282 LRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTS 328
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-376 |
3.74e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 3.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 93 RIFTATLITVQPFIILAFSTTELMMFyISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 173 TLHLPTLKLTPHLLppsSTNHWSTLFLNMALL-----TAFMVKAPLYglhLWLPKAhVEAPIAGSMLLAALLLKLGGYGL 247
Cdd:PRK12649 191 TYDIATILQDSELI---ENIKGHPLFLITLILifigaAAKSAQGPFY---IWLPNA-MEAPTPVSAFLHSATMVKAGVYL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 248 M-RITFLTNPSPSNLLHYPFITLALwgALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTY----WSFSGAMILMI 322
Cdd:PRK12649 264 VaRIHPIFSGTEAWFILVSGTGMIT--MVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLL 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 325126686 323 SHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12649 342 NHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
106-332 |
1.24e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 40.78 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 106 IILAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTphL 185
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLV--L 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 186 LPPSSTNHWSTLFLNMALLTAFMVKAPLYGLHLWLPKAHVEAPiagsMLLAALLLKLGGYGLMRITFLTNPSPSNLLHYP 265
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 325126686 266 FITLALwGALMTssicLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLF 332
Cdd:MTH00196 160 LFSLFV-GAIGA----LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-335 |
1.93e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 40.60 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 137 GNQPERLSAGIYLLFYTLISSLPLLVAILYLHSQMGTLHLPTLKLTPHLLPPSSTnhwsTLFLNMA--LLTAFMVKAPLY 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADR----ALLEAGAalLLVVFLIKAAMW 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 215 GLHLWLPKAHVEA--PIAGSMllaalllklggyGLM---------RITFLTNPSPSNLLHYPFITLALWGALMTSSI--- 280
Cdd:PRK12666 228 PLNFWLPPAYAAAsaPVAALF------------AIMtkvgiyailRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgai 295
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 325126686 281 -CLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK12666 296 gVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
140-232 |
6.35e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.11 E-value: 6.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 325126686 140 PERLSAGI-YLLFYTLiSSLPLLVAILYLHSQMGTLhlptlkLTPHLLPPSSTNHWSTLFlnmalltAFMVKAPLYGLHL 218
Cdd:PRK12668 139 KAAVRAGFrYLLVHVL-GGVLLLAGILLHYAETGSF------AFGAIAGLGGTAAWLILI-------GFGVNAAFPPLHA 204
|
90
....*....|....
gi 325126686 219 WLPKAHVEAPIAGS 232
Cdd:PRK12668 205 WLPDAYPEATVTGS 218
|
|
| |
