|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.67e-152 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 431.17 E-value: 4.67e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTLMSTT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQWYAKTS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 320526294 321 TNTLIPALTSLSVSLLPLTPMMLTTT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
8.50e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 366.94 E-value: 8.50e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTLMSTT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQWYAKTS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....
gi 320526294 321 TNTLIPALTSLSVSLLPLTPMMLT 344
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILN 344
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
5.11e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 357.58 E-value: 5.11e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTtILLITSHSLNPTLLTLMSTT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQWYAKTS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*
gi 320526294 321 TNTLIPAL-TSLSVSLLPLTPMMLT 344
Cdd:MTH00135 320 QLTLPLAIsTTATLMLLPLTPAILA 344
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.40e-114 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 334.89 E-value: 4.40e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTLMSTT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQW-YAKT 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWqFENT 320
|
330 340
....*....|....*....|....*..
gi 320526294 320 STNTLIPALTSLSVSLLPLTPMMLTTT 346
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.45e-95 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 286.86 E-value: 2.45e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTLMSTT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQWYAKTS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 320526294 321 TNTLIPALTSLSVSLLPLTPMMLTTT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-336 |
2.20e-82 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 254.08 E-value: 2.20e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 11 SSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLS 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 91 YPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTLMSTTSIALGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 171 NQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPMLSTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 251 LAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQWYAKTSTNTLIPALTS 330
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSI 330
|
....*.
gi 320526294 331 LSVSLL 336
Cdd:MTH00041 331 LSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
5.29e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.12 E-value: 5.29e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 tgqwdITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILlitSHSLNPTLLTLMSTT 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 161 SIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLppNPSNKTKQWYAKTS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330 340
....*....|....*....|...
gi 320526294 321 TNTLIPALTSLSVSLLPLTPMML 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
2.72e-46 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 160.05 E-value: 2.72e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 1 MTPIAKLISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWY 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITqlsyppacLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPT-TILLITSHSLNPTLLTLMST 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 160 TSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLpTLMVSWTKTPM 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-KDLGSLKPSYK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 320526294 240 LSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTKQW 315
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-340 |
4.84e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 156.86 E-value: 4.84e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 7 LISTSSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTInawytgQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 87 TQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTLMSTTSIALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 167 WMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPMLSTTLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 247 TLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYcTTITLPPNPSNKTkqwYAKTSTNTLIP 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSLK---SAPYEPKTKIL 318
|
330
....*....|....
gi 320526294 327 alTSLSVSLLPLTP 340
Cdd:MTH00011 319 --ISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-302 |
1.70e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.51 E-value: 1.70e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 11 SSILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGtinaWYTGQWDITQLS 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG----SLSFSNLYLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 91 YppaCLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHslNPTLLTLMSTTSIALGGWMGL 170
Cdd:MTH00197 81 S---VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 171 NQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLMTASIFLTMNTTNTLSLPTLMVSWTKTPMLSTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 320526294 251 LAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTI 302
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.62e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.12 E-value: 2.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 13 ILLGTTITITSNHWMTAWIGLEINTLSVIPMI-SKSHHPRAIEATTKYFLVQAAASTLLLFSGT-------------INA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 79 WYTGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLitSHSLNPTLLTLMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 159 TTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNP----KLTLLAFYIYTLMTASIF---LTMNTTNTLSLPTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 320526294 232 VSwTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRL 296
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
3.70e-27 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 111.36 E-value: 3.70e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 14 LLGTTITITSNHWMTAWIGLEINTLSVIPMIS-KSHHPRAIEATTKYFLVQAAASTLLLF--------SGTIN----AWY 80
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNlagiAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKL----PPTTILLITSHSLNP---TL 153
Cdd:COG1007 192 LAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 154 LTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAI-IITHNPK-LTLLAFY--IYTLMTASIFLTMNTTNTLSLPT 229
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVILLLSRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 320526294 230 LMVS-----WTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAY 298
Cdd:COG1007 352 EEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.61e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 102.39 E-value: 5.61e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 23 SNHWMTAWIGLEINTLSVIPMI-SKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLSYPP-------- 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 94 ---ACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFT-TALLLSTVMKLPPttILLITSHSLNPT-------LLTLMSTTSI 162
Cdd:pfam00361 81 lllLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 163 ALGGWMGLNQTQTRKIMAFSSISHIGWM--AIIITHNPKLTLLAFY--IYTLMTASIFL--------TMNTTNTLSLPTL 230
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMliALGAGTIYGIQAAIFHllTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 320526294 231 mvsWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 ---AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.22e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 100.28 E-value: 2.22e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 14 LLGTTITITSNHWMTAWIGLEINTLSVIPMIS-KSHHPRAIEATTKYFLVQAAASTLLLF--------SGTINAWYTGQW 84
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYgmsllygaTGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 85 DITQLSYPP----ACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKL----PPTTILLITSHSLNPT---L 153
Cdd:PRK05777 193 LADGSGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 154 LTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWM--AIIITHNPKLTLLAFY--IYTLMTASIF--LTMNTTNTLSL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYllAYLFMTLGAFgvISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 320526294 228 PTL----MVSWTKtPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRL 296
Cdd:PRK05777 353 ESIsdfaGLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
4.92e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 96.24 E-value: 4.92e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 13 ILLGTTITITSNHWMTAWIGLEINTLSVIPMIS-KSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLSY 91
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 92 PPAC----LLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTlmSTTSIALGGW 167
Cdd:MTH00199 186 ILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 168 MGLNQTQTRKIMAFSSISHIGW----MAIIITHNPKLTLLAFYIYTLMTA---SIFLTMNTTNTLSLPTLMVSwTKTPML 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSIcsfSIILSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260
....*....|....*....|....*..
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-297 |
2.08e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 94.63 E-value: 2.08e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 13 ILLGTTITITSNHWMTAWIGLEINTL-SVIPMISKSHHPRAIEATTKYFLVQAAASTLLLF--------SGTIN----AW 79
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLcFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFgisliygfTGSLNfedlLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 80 YTGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILL-------ITSHSLNPT 152
Cdd:TIGR01770 191 FLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 153 LLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIIT----HNPKLTLLAFYIYTLMTASIFLTM------NTT 222
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLagtlEGIKAVLFYIFIYALMSLGAFGVLsllrsyKDE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 320526294 223 NTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLA 297
Cdd:TIGR01770 351 WIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-271 |
1.66e-18 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 85.97 E-value: 1.66e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 14 LLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLS--- 90
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 91 --YPP-----ACLLLTTAIAIKLGLVPFHFWFPEVL-QGSSFTTALLLSTVMKLPP-------TTILLITSHSLNPTLLT 155
Cdd:COG0651 197 aeLDPglllaAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVyailrvlTLLFGADPALFLGTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 156 LMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIY----TLMTASIFLT----MNTTNTLSL 227
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRDL 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 320526294 228 PTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELI 271
Cdd:COG0651 357 DKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAAL 400
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-272 |
5.25e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 76.05 E-value: 5.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 15 LGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAI---------EATTKYFLVQAAASTLLLFS------------ 73
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 74 --GTINAWYTGQWDITQLSYPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLppTTILLITSHSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 152 TLLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIY-------TLMTASIFLTMNTTNT 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYavtylvsALASFTVICTLEEFGT 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 320526294 225 LS------------------LPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:MTH00198 437 RTptsrqrdgsfgnynlvrrLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIK 502
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
3.62e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 70.03 E-value: 3.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 51 RAIEATTKYFLVQAAASTLLL--FS-------GTINAWYTGQWDI-TQLSYPPACLL----LTTAIAIKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSwlyglsgGEIELQEIVNGLInTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 117 EVLQGSSFTTALLLSTVMKLP----PTTILLITSHSLNP---TLLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAasalATRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 190 MAI-IITHNPK------LTLLAFYIY-TLMT-ASIFLTMNTTNTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGF 260
Cdd:CHL00049 319 VIIgIIVGDSNdgyasmITYMLFYIFmNLGTfACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 320526294 261 LPK 263
Cdd:CHL00049 399 FGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-192 |
5.23e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.64 E-value: 5.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 38 LSVIPM---ISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQW-----DITQLSYPPA-----CLLLTTAIAI 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 105 KLGLVPFHFWFPEVLQGSSFTTALLLSTVMK-----------LPpttILLITSHSLNPTLLTLmSTTSIALGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQT 297
|
170
....*....|....*....
gi 320526294 174 QTRKIMAFSSISHIGWMAI 192
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLL 316
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
3.63e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.96 E-value: 3.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 33 LEINTLSVIPMIS-KSHHPRAIEATTKYFLVQAAASTLLLFSgtINAWYtGQWDITQLSYPP-------------ACLLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLG--IALLY-GQYGTLNMAYLAvkmsenptvvakiALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 99 TTAIAIKLGLVPFHFWFPEVLQG--SSFTTALLLSTVMKLPPTTILLITSHSLNPTLLTL------MSTTSIALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 171 NQTQTRKIMAFSSISHIGWM------AIIITHNPKL-----TLLAFYIY-----TLMTASIFLT----MNTTNTLSLPTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMasygeIALAGGIYhivnhALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 320526294 231 MVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-279 |
1.91e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.94 E-value: 1.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 23 SNHWMTAWIGLEINTLSVIPMISKSHHpRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDI----------TQLSYP 92
Cdd:PRK08668 117 ANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisqglindTSTGFA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 93 PACLLLTTAIAI-KLGLVPFHFWFPEV--LQGSSFTTAL----------LLSTVMKLPPTTILLIT-----SHSLNPTLL 154
Cdd:PRK08668 196 LIVFLFLLAFGVaKAGIFPLHVWAPDAysEAPQSFSAVLsgqlsklgayGFLLVLYVLPGTKLFSEfgtyrGVPLFNYIL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 155 TLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLA--FYIYT--LMTASIFLTMNT----TNTLS 226
Cdd:PRK08668 276 AWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGglFHVFNhaLFKGLFFLIFAAviyrTGTTK 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 320526294 227 LPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQELTTTA 279
Cdd:PRK08668 356 ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA 408
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-336 |
4.41e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 60.66 E-value: 4.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 33 LEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLS--YPPACLLLT------TAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 105 KLGLVPFHFWFPEVLQG-SSFTTALLLSTVMKLPPTTILLITSH------SLNPTLLTLMSTT---SIALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTvfggdfRFALGLGWLLAVLallSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 175 TRKIMAFSSISHIGWMAIIITHNPKLTLLA--FYI--YTLMTASIFLT----MNTTNTLSLPTLMVSWTKTPMLSTTLML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 247 TLLSLAGLPPLTGFLPKWLIIQELIKQELTTTATTISLLSLLSLFFYLRLAYCTTITLPPNPSNKTkqwYAKTSTNTLIP 326
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAP---KQEAPLGMLAP 451
|
330
....*....|
gi 320526294 327 ALTSLSVSLL 336
Cdd:PRK08375 452 SLALALLSLL 461
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-279 |
6.07e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 54.18 E-value: 6.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 50 PRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQW----DITQLSYPPAC-----LLLTTAIAIKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 120 QGSSFTTALLLSTVMKLPPTTILLI-------TSHSLNPTLLTLmSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAPVLAAL-GVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 193 IITHNPKLTLLAFYIYT----LMTASIFLTMNT----TNTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250
....*....|....*
gi 320526294 265 LIIQELIKQELTTTA 279
Cdd:TIGR01972 391 LILLGSFKVNPVVAF 405
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-263 |
7.85e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.16 E-value: 7.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 81 TGQWDITQL-SYPPACLLLTTAIAI-------KLGLVPFHFWFPEVLQGSSFTTALLLSTVM---------KLPPTtilL 143
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 144 ITSHSLNPTLLTLMSTTSIaLGGWMGLNQTQTRKIMAFSSISHIGWMAIII---THNPKLTLLAFYI-YTLMTASIFLTM 219
Cdd:PRK12644 261 ADVPVWRPTVLVLGLATML-LGGWRALRQHDLKLILAYGTVSQLGFLTVLVgigTRDAALAGLAMLLaHALFKAALFLVV 339
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 320526294 220 ----NTTNTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 340 giidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
2.88e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.06 E-value: 2.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 13 ILLGTTITITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAA------STLLLFSGTINAWYTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 87 TQLS-----YPPACLLLT-----TAIAIKLGLVPFHFWFPEV-LQGSSFTTALLLSTVMKLPPTTILLITS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 320526294 149 LNPTLLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
3.51e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 48.61 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 48 HHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLS-----------YPPACLLLTTAIAIKLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLaaaptilssplLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 117 EVLQGSSFTTALLLSTVM---------KLPPttiLLITSHSLNPTLLTLMSTTSIaLGGWMGLNQTQTRKIMAFSSISHI 187
Cdd:COG1009 236 DAMEGPTPVSALLHAATMvkagvyllaRLSP---LFALSPVWLTVVAIIGAITAL-FAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 188 GWMAI-------------IITHnpkltllAFYIYTL-MTA-SIFLTMNTTNTLSLPTLmvsWTKTPMLSTTLMLTLLSLA 252
Cdd:COG1009 312 GYMFLalgvgayvaalfhLLTH-------AFFKALLfLGAgSVIHATGTRDIRKMGGL---RKKMPITAITFLIGALSLA 381
|
250
....*....|....*....
gi 320526294 253 GLPPLTGFLPKWLIIQELI 271
Cdd:COG1009 382 GIPPFAGFFSKEAILEAAL 400
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
6.10e-06 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 47.74 E-value: 6.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 50 PRAIEATTKYFLVQAAASTLLLF---------SGTINAWYTGQWDITQLSYPPACLLL--TTAIAIKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsGGSTQLSAIALALITSPSLGLALALVfvIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 119 LQGSSFTTALLLSTVMKLPPTTI---LLITSHSLNPT----LLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 192 IIITHNPKLTLLAFYIYTLmtasIFLTMN------------TTNTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTG 259
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLL----AYLFMNlgafacvilfslRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 320526294 260 FLPK 263
Cdd:PRK02504 393 FFGK 396
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-272 |
6.62e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 47.80 E-value: 6.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 59 YFLVQAAASTLLLFSGTINAWY-TGQWDITQLSYPPAC-----LLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 133 VM-KLPPTTILLITSHSLNP-----TLLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIG--------WMAIIITHNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 199 KLTLLA-------------FYIYTLMTA-SIFLTMNTTNTLSLPTLMVSwtkTPMLSTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 326 TLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFASEL 402
|
....*...
gi 320526294 265 LIIQELIK 272
Cdd:PRK08667 403 LLYESFFQ 410
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-211 |
9.66e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 47.23 E-value: 9.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 20 TITSNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLFsGTINAWYTGQwdiTQLSYPPACLLLT 99
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALF-GTILVYANAA---TVMGDGEMAILWT 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 100 TAIAI----------------------KLGLVPFHFWFPEV-LQGSSFTTALLLSTVMKLPPTTIL---LITSHSLNP-- 151
Cdd:PRK06458 200 ELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVALYAVLryyILIDAAIGSdf 279
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 320526294 152 --TLLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYTLM 211
Cdd:PRK06458 280 pgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLN 341
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-230 |
1.83e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 46.18 E-value: 1.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 55 ATTKYFLVQAAASTLLLFSGTINAWYTGQ--WDITQL---SYPPACLLLT-----TAIAIKLGLVPFHFWFPEVLQGSSF 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 125 TTALLLSTVM-KLPPTTI------LLITSHSLNPTLLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHN 197
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 320526294 198 PKL----TLLAFYIYTLMTASIFL----TMNTTNTLSLPTL 230
Cdd:PRK12561 298 TDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLSIPNM 338
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
1.85e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 46.57 E-value: 1.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 98 LTTAIAI--------KLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITS--HSLNPT---LLTLMSTTSIAL 164
Cdd:PRK12650 206 LTTVVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 165 GGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIYT----LMTASIFLTM----NTTNTLSLPTLMVSWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 320526294 237 TPMLSTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
1.99e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.35 E-value: 1.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 38 LSVIPM---ISKSHHPRAIEATTKYFLVQAAASTLLLFS----GTINAWYTGQWDITQL---SYPPA-------CLLLtt 100
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLlnlPLPPGvqywlflAFFI-- 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 101 AIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVM-----------KLPpttILLITSHSLNPTLLTLmSTTSIALGGWMG 169
Cdd:PRK05846 220 AFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILlkmgaygllrfSLP---LFPDASHEFAPIIITL-GVIAIIYGALVA 295
|
170 180
....*....|....*....|....*
gi 320526294 170 LNQTQTRKIMAFSSISHIGWMAIII 194
Cdd:PRK05846 296 LAQTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-266 |
2.76e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 46.07 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 91 YPPACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMKLPPTTILLITSHSLNPT-----LLTLMSTTSIALG 165
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTG 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 166 GWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIY----TLMTASIFLTMNT----TNTLSLPTLMVSWTKT 237
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAM 353
|
170 180
....*....|....*....|....*....
gi 320526294 238 PMLSTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 354 PITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
6.90e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.82 E-value: 6.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 48 HHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQLSYPPAC--------LLLTTAIAIKLGLV------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 114 WFPEVLQGSSFTTALLLSTVMkLPPTTILLITSH---SLNPTLLTLMSTTSIA---LGGWMGLNQTQTRKIMAFSSISHI 187
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATM-VKAGVYLVARIHpifSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 188 GWMAII----ITHNPKLTLLAFYIYTL----MTASIFLTM----NTTNTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLP 255
Cdd:PRK12649 315 AYLMTMygytTYHEPGLGVAAATFHLLnhatFKACLFLVAgivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 320526294 256 PLTGFLPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
7.54e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 39.93 E-value: 7.54e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 320526294 291 FFYLRLAYCTTITLPPNPSNKTKQW-YAKTSTNTLIPALTSLSVSLLPLTP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWrFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-272 |
3.36e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 42.41 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 23 SNHWMTAWIGLEINTLSVIPMISKSHHPRAIEATTKYFLVQAAASTLLLF--------SGTINAwyTGQWDITQLSYPP- 93
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIgigflyaiTGTLNM--GDMFLIIQDLPTNr 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 94 ----ACLLLTTAIAIKLGLVPFHFWFPEVLQGS-SFTTALLLSTVMKLPPTTI-----------LLITSHSLNPTLLTLm 157
Cdd:PRK12662 207 aiqiGVLFIMVGLFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIirivydvfkanFVFTTLPFNNVFMIL- 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 158 STTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLAFYIY----TLMTASIFLTMNTT----NTLSLPT 229
Cdd:PRK12662 286 AALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLED 365
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 320526294 230 LMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK12662 366 CLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
4.96e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.74 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 96 LLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTV-MKLPPTTILLITSHSLNPTL-----LTLMSTTSIALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 170 LNQTQTRKIMAFSSISHIGWMAI--------IITHNPKLTLLAFY--IYTLMTASIFLTM---------NTTNTLSLPTL 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 320526294 231 MVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-273 |
9.44e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 15 LGTTITITSNHWMTAWIGLEINTLS---VIPMISKSHHPRAIeattkyFLVQAAASTLLLFSGTINAWY-TGQWDITQLS 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 91 YPPACLLLTTAIAIKLGLVPFHF--WFPEVLQGSSFTTALLLSTVMKLPPT-TILLITSHSLNPT------LLTLMSTTS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVyGILKMTILTQTIPigyfglTILAIGAFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 162 IALGGWMGLNQTQTRKIMAFSSISHIGWM-----AIIITHNPKLTLLAFYIYTLMTAS---------IFLTMNTTNTLSL 227
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSI 316
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 320526294 228 PTLmvSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQ 273
Cdd:PRK06459 317 TYS--KKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESLFMF 360
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
14-190 |
9.64e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.84 E-value: 9.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 14 LLGTTITITSNHW---MTAW--IGLEINTLSVIpmisKSHHPRAIEATTKYFLVQAAASTLLLFSGTINAWYTGQWDITQ 88
Cdd:PRK08168 110 LAAVHLLVLSDHLlvlIAAWaaISLALHRLLCF----YPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 89 L-----SYPP------ACLLLTTAIAIKLGLVPFHFWFPEVLQGSSFTTALLLSTV-----MKLPPTTILLITSHSLNpT 152
Cdd:PRK08168 186 LwahlaAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggFVLIRFAPLLEQAPPAR-W 264
|
170 180 190
....*....|....*....|....*....|....*...
gi 320526294 153 LLTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWM 190
Cdd:PRK08168 265 LLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-268 |
1.38e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.32 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 96 LLLTTAIAIKLGLVPFhFWFPEVLQGSSFTTALLLSTVMK-------LPPTTILLITSHSLNPTLLTLMSTTSIALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 169 GLNQTQTRKIMAFSSISHIGWM-AIIITHNPK-LTLLAFY---IYTLMTASIFLT---MNTTNTLSLPTLMVSWTKTPML 240
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFIlLGLALGTPAgINGAIFYlvhDMVVKTALFLIAgslVRLTGYRSLQYLGGLYRKEPLF 369
|
170 180
....*....|....*....|....*...
gi 320526294 241 STTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
2.61e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.57 E-value: 2.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 96 LLLTTAIAIKLGLVPFHFWFPEvlqgsSFTTALLLST-----------VMKLPPTTILLITSHSLNpTLLTLMSTTSIAL 164
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPD-----SYPTAPAPVTavfaglltkvgVYAIIRTHTLLFPGGGLD-TLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 165 GGWMGLNQTQTRKIMAFSSISHIGWMAIIITHNPKLTLLA--FYI--YTLMTASIFLTM----NTTNTLSLPTLMVSWTK 236
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGaiYYVahHITVQTTLFLVVglieRQAGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|..
gi 320526294 237 TPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
60-268 |
2.76e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 39.31 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 60 FLVQAAASTLLLFSGTINAWYTGQwdITQ-LSYPPACLLLTTAI---AIKLGLVPFHFWFPEVLQGSSFTTALLLSTVMK 135
Cdd:PRK07363 171 LLVLAAFLGIVWLSGSTSFDYDAI--STQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLA 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 136 LPPTTILLI--------TSHSLNPTLLTLmSTTSIALGGWMGLNQTQTRKIMAFSSISHIGW----------------MA 191
Cdd:PRK07363 249 KLGTYGLLRfglqlfpqTWSLVAPGLAII-GTISVIYGALSAIAQKDIKRMVAYSSIGHMGYilvaaaagtqlsllgaVA 327
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 320526294 192 IIITHNPKLTLLaFYIYTLMTASIfltmNTTNTLSLPTLMVSWTKTPMLSTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 328 QMISHGLILALL-FHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
3.44e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.17 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 105 KLGLvpfHFWFPEVLQGSSFTTALLLSTVMkLPPTTILLITSHSL------NPTLLTLMSTTSIALGGWMGLNQTQTRKI 178
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLfekaplTLLIITIFGALTAFFAATVGLVQNDLKKV 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 179 MAFSSISHIGWMAIII----THNPKLTLL---AFYIYTL-MTASIFLTMNTTNTLSLPTLMVSWTKTPMLSTTLMLTLLS 250
Cdd:MTH00032 317 IAYSTCSQLGYMVLIIgiegSHNVGLFHLvnhAFFKALLfLSAGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFS 396
|
170
....*....|....*...
gi 320526294 251 LAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 397 IMGLPYLTGFYSKDLILE 414
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-204 |
3.98e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 38.91 E-value: 3.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 55 ATTKYFLVQAAASTLLLFSGTINAWYTGqwdITQLSYPPAC---------LLLTTAI----AIKLGLVPFHFWFPEVLQG 121
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSG---ASSFDYEPLRshtlplstqLLLLAPIlvgfGIKIPLVPFHTWLPDAHVE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 122 SSFTTALLLSTVMKLPPTTILLITSHSLNPTL-------LTLMSTTSIALGGWMGLNQTQTRKIMAFSSISHIGWMAIII 194
Cdd:PRK06473 235 ASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAwvylapwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAA 314
|
170
....*....|
gi 320526294 195 THNPKLTLLA 204
Cdd:PRK06473 315 AAATPLSILA 324
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-197 |
8.16e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 8.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320526294 101 AIAIKLGLVPFHFWFPEV-LQGSSFTTALLLSTVMKLP-------PTTILLITSHSLNPTLLTlMSTTSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGgyglvrlSWPILPLGAQNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100
....*....|....*....|....*.
gi 320526294 173 TQTRKIMAFSSISHIGWMAI-IITHN 197
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSItLVTHD 343
|
|
| |
