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replication protein (plasmid) [Shigella flexneri 2a str. 301]
replication regulatory protein RepA( domain architecture ID 10014355)
replication regulatory protein RepA is involved in the determination of copy number in gene replication and binds to the repA promoter thus inhibiting the synthesis of the mRNA for the initiator protein RepA
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
PRK13702 | PRK13702 | replication regulatory protein RepA; |
1-85 | 1.59e-42 | |||
replication regulatory protein RepA; : Pssm-ID: 184258 Cd Length: 85 Bit Score: 133.31 E-value: 1.59e-42
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Name | Accession | Description | Interval | E-value | |||
PRK13702 | PRK13702 | replication regulatory protein RepA; |
1-85 | 1.59e-42 | |||
replication regulatory protein RepA; Pssm-ID: 184258 Cd Length: 85 Bit Score: 133.31 E-value: 1.59e-42
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RepB-RCR_reg | pfam10723 | Replication regulatory protein RepB; This is a family of proteins which regulate replication ... |
1-82 | 1.64e-37 | |||
Replication regulatory protein RepB; This is a family of proteins which regulate replication of rolling circle replication (RCR) plasmids that have a double-strand replication origin (dso). Regulation of replication of RCR plasmids occurs mainly at initiation of leading strand synthesis at the dso, such that Rep protein concentration controls plasmid replication. Pssm-ID: 287668 Cd Length: 81 Bit Score: 120.50 E-value: 1.64e-37
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Name | Accession | Description | Interval | E-value | |||
PRK13702 | PRK13702 | replication regulatory protein RepA; |
1-85 | 1.59e-42 | |||
replication regulatory protein RepA; Pssm-ID: 184258 Cd Length: 85 Bit Score: 133.31 E-value: 1.59e-42
|
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RepB-RCR_reg | pfam10723 | Replication regulatory protein RepB; This is a family of proteins which regulate replication ... |
1-82 | 1.64e-37 | |||
Replication regulatory protein RepB; This is a family of proteins which regulate replication of rolling circle replication (RCR) plasmids that have a double-strand replication origin (dso). Regulation of replication of RCR plasmids occurs mainly at initiation of leading strand synthesis at the dso, such that Rep protein concentration controls plasmid replication. Pssm-ID: 287668 Cd Length: 81 Bit Score: 120.50 E-value: 1.64e-37
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Blast search parameters | ||||
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