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Conserved domains on  [gi|318067408|dbj|BAJ61199|]
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UDP-N-acetylglucosamine: dolichol phosphate N-acetylglucosamine-1-P transferase [Gateway binary vector pGWB714]

Protein Classification

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase( domain architecture ID 10160631)

UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc onto the carrier lipid dolichyl phosphate in the dolichol pathway of N-linked protein glycosylation; belongs to glycosyltransferase family 4

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
99-382 7.20e-134

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


:

Pssm-ID: 133465  Cd Length: 283  Bit Score: 385.83  E-value: 7.20e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  99 IPVTARYVLRRNMFGFDINKRGTPqgdiKVPESLGIVVGIVFLIVAIIFQYFNFTEDS--NWLVEYNAALASICFMILLG 176
Cdd:cd06855    1 IPKFGPLFIKAGLYGIDLNKNGEE----KIPESAGLVPGIVFLIVLFLFIPFPFLKDFphDKLVEYLSALLSICCMTFLG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 177 FVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIVIPKPLVAYIGLEVLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLE 256
Cdd:cd06855   77 FADDVLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVPLRPLLGTLIDLGILYYVYMILLAVFCTNSINIYAGINGLE 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 257 IGQTVVIAAAILIHNVMQIGASVDPEYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGH 336
Cdd:cd06855  157 VGQSLVIALSILLYNLLELNGSSGSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAGMVFAVVGILGH 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 318067408 337 FSETLLIFFLPQVLNLLLSLPQLAGIVKCPRHRLPRYDPATGLLTG 382
Cdd:cd06855  237 FSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEP 282
 
Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
99-382 7.20e-134

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 385.83  E-value: 7.20e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  99 IPVTARYVLRRNMFGFDINKRGTPqgdiKVPESLGIVVGIVFLIVAIIFQYFNFTEDS--NWLVEYNAALASICFMILLG 176
Cdd:cd06855    1 IPKFGPLFIKAGLYGIDLNKNGEE----KIPESAGLVPGIVFLIVLFLFIPFPFLKDFphDKLVEYLSALLSICCMTFLG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 177 FVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIVIPKPLVAYIGLEVLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLE 256
Cdd:cd06855   77 FADDVLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVPLRPLLGTLIDLGILYYVYMILLAVFCTNSINIYAGINGLE 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 257 IGQTVVIAAAILIHNVMQIGASVDPEYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGH 336
Cdd:cd06855  157 VGQSLVIALSILLYNLLELNGSSGSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAGMVFAVVGILGH 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 318067408 337 FSETLLIFFLPQVLNLLLSLPQLAGIVKCPRHRLPRYDPATGLLTG 382
Cdd:cd06855  237 FSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEP 282
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
164-335 2.66e-24

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 98.06  E-value: 2.66e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  164 AALASICFMILLGFVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIvipkpLVAYIGLEVLNLGRIYKLYMGLLAVFC- 242
Cdd:pfam00953   2 GLLLGALLIGLIGLIDDLLGLSARIKLLLQALAALILLVLGGIGLTS-----LGLPFGGGSLELGPWLSILLTLFAIVGl 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  243 TNSINIHAGLNGLEIGQTVVIAAAILIHNvmqigasvdpeYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTV 322
Cdd:pfam00953  77 TNAVNFIDGLDGLAGGVAIIAALALGIIA-----------YLLGNLELALLSLALLGALLGFLPFNFYPAKIFMGDSGSL 145
                         170
                  ....*....|...
gi 318067408  323 FAGMTMAVVGILG 335
Cdd:pfam00953 146 FLGFLLAVLAIIG 158
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
89-346 8.57e-22

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 94.81  E-value: 8.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  89 LVGFFVTLKMIPVTARYVLRRNMF----GFDINKRGTPQGdikvpesLGIVVGIVFLIVAIIFQYFnftedsnWLVEYNA 164
Cdd:COG0472    8 LLAFLLSLLLTPLLIRLARRLGLVddpnERKSHKRPTPRM-------GGIAIFLGFLLALLLLALL-------SNPELLL 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 165 ALASICFMILLGFVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIVIPkplvayiGLEVLNLGRIYKLYMGLLAVFCTN 244
Cdd:COG0472   74 LLLGALLLGLIGFLDDLLGLSARQKLLGQLLAALLLVLLLLRITSLTIP-------FFGLLDLGWLYIPLTVFWIVGVSN 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 245 SINIHAGLNGLEIGQTVVIAAAILIHNvmqigasvdpeYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFA 324
Cdd:COG0472  147 AVNLTDGLDGLAAGVSLIAALALAIIA-----------YLAGQGELALLAAALAGALLGFLWFNFPPAKIFMGDTGSLFL 215
                        250       260
                 ....*....|....*....|..
gi 318067408 325 GMTMAVVGILGHFSETLLIFFL 346
Cdd:COG0472  216 GFALAALAILGRQEGASLLLLL 237
 
Name Accession Description Interval E-value
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
99-382 7.20e-134

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 385.83  E-value: 7.20e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  99 IPVTARYVLRRNMFGFDINKRGTPqgdiKVPESLGIVVGIVFLIVAIIFQYFNFTEDS--NWLVEYNAALASICFMILLG 176
Cdd:cd06855    1 IPKFGPLFIKAGLYGIDLNKNGEE----KIPESAGLVPGIVFLIVLFLFIPFPFLKDFphDKLVEYLSALLSICCMTFLG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 177 FVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIVIPKPLVAYIGLEVLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLE 256
Cdd:cd06855   77 FADDVLDLRWRHKLILPTFASLPLLMVYYGNTGITLPIVPLRPLLGTLIDLGILYYVYMILLAVFCTNSINIYAGINGLE 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 257 IGQTVVIAAAILIHNVMQIGASVDPEYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGH 336
Cdd:cd06855  157 VGQSLVIALSILLYNLLELNGSSGSMTLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFVGDTFTYFAGMVFAVVGILGH 236
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 318067408 337 FSETLLIFFLPQVLNLLLSLPQLAGIVKCPRHRLPRYDPATGLLTG 382
Cdd:cd06855  237 FSKTLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGLLEP 282
GT_GPT_like cd06851
This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and ...
113-349 5.46e-51

This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and archaeal GPT-like glycosyltransferases. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaeal gene, indicating eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133461  Cd Length: 223  Bit Score: 171.53  E-value: 5.46e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 113 GFDINKRGTPqgdiKVPESLGIVVGIVFLIVAIIFQYFNFTEDSNW-LVEYNAALASICFMILLGFVDDVLDVPWRVKLV 191
Cdd:cd06851    2 GKDMNKKGNV----MIPEPGGISILIGFVASEITLIFFPFLSFPHFpISEILAALITSVLGFSVGIIDDRLTMGGWFKPV 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 192 LPSFATLPLLMAYAGHTTIVIPkplvayIGLEVLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLEIGQTVVIAAAILIHN 271
Cdd:cd06851   78 ALAFAAAPILLLGAYDSNLDFP------LFGGSVKIPSLYLVLVVFMIVITGNAFNSIAGLNGVEAGFTTIISFALAISL 151
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 318067408 272 VMQIgasvdpeyhqaHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGHFSETLLIFFLPQV 349
Cdd:cd06851  152 LVQQ-----------NYEIGIACLCLAFASLAFLYYNKYPSRIFPGDTGAYMFGATYAVVAILGEVEKIAAVAFIPAI 218
GT_GPT_archaea cd06856
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT ...
112-416 1.45e-31

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene, indicating that eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133466  Cd Length: 280  Bit Score: 121.59  E-value: 1.45e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 112 FGFDINKRGTPqgdiKVPESLGIVVGIVFLIVAIIFQYFNFTedsnwlVEYNAALASICFMILLGFVDDVLDVPWRVKLV 191
Cdd:cd06856    1 VGRDVHKPGKP----EVPEMGGIAVLLGFSLGLLFLSALTHS------VEALALLITSLLAGLIGLLDDILGLSQSEKVL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 192 LPSFATLPLLMAYAGHTTIVIPKPLVAYIGLevlnlgrIYKLYMGLLAVFCTNSINIHAGLNGLEIGQTVVIAAAILIHN 271
Cdd:cd06856   71 LTALPAIPLLVLKAGNPLTSLPIGGRVLGIL-------YYLLIVPLGITGASNAFNMLAGFNGLEAGMGIIILLALAIIL 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 272 VMQigasvdpeyhqAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGHFSETLLIFFLPQVlN 351
Cdd:cd06856  144 LIN-----------GDYDALIIALILVAALLAFLLYNKYPAKVFPGDVGTLPIGALIGTIAVLGGLEIILLILLLPYV-I 211
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 318067408 352 LLLSLPQLAGIVKCPRHRLPRYDpatglltgtKDGTLVNVY----------LRLFGPKSEKSLCIHLLVFQALAC 416
Cdd:cd06856  212 DFLLKLRSKGGGKEHREKPTKVL---------EDGTLYPPPdksslltlrlLLRKGPMTEKEVVLVLWALEALLG 277
GT_MraY-like cd06499
Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine: ...
127-332 4.81e-29

Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases. They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate, which is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. One member, D-N-acetylhexosamine 1-phosphate transferase (GPT) is a eukaryotic enzyme, which is specific for UDP-GlcNAc as donor substrate and dolichol-phosphate as the membrane bound acceptor. The bacterial members MraY, WecA, and WbpL/WbcO utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic endproducts implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The eukaryotic reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for N-glycosylation. The prokaryotic reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly. Archaeal and eukaryotic enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme. Archaea possess the same N-glycosylation pathway as eukaryotes. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene.


Pssm-ID: 133460  Cd Length: 185  Bit Score: 112.01  E-value: 4.81e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 127 KVPESLGIVVGIVFLIVAIIFQYFNFTEdsnwlveYNAALASICFMILLGFVDDVLD----VPWRVKLVLPSFATLPLLM 202
Cdd:cd06499    1 PTPTMGGLAILLGFLLGVLLYIPHSNTL-------ILLALLSGLVAGIVGFIDDLLGlkveLSEREKLLLQILAALFLLL 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 203 AYAGHTTIVIPKPLVayiglevLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLEIGQTVVIAAAILIHNVMQigasvdpe 282
Cdd:cd06499   74 IGGGHTTVTTPLGFV-------LDLGIFYIPFAIIAIVGATNAVNLIDGMDGLAAGISVIASIACALFALLS-------- 138
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 318067408 283 yHQAHAFSIFLtqPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVG 332
Cdd:cd06499  139 -GQTTSALLFI--ILAGACLGFLYFNFYPAKIFMGDTGSYFLGAAYAAVA 185
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
164-335 2.66e-24

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 98.06  E-value: 2.66e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  164 AALASICFMILLGFVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIvipkpLVAYIGLEVLNLGRIYKLYMGLLAVFC- 242
Cdd:pfam00953   2 GLLLGALLIGLIGLIDDLLGLSARIKLLLQALAALILLVLGGIGLTS-----LGLPFGGGSLELGPWLSILLTLFAIVGl 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  243 TNSINIHAGLNGLEIGQTVVIAAAILIHNvmqigasvdpeYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTV 322
Cdd:pfam00953  77 TNAVNFIDGLDGLAGGVAIIAALALGIIA-----------YLLGNLELALLSLALLGALLGFLPFNFYPAKIFMGDSGSL 145
                         170
                  ....*....|...
gi 318067408  323 FAGMTMAVVGILG 335
Cdd:pfam00953 146 FLGFLLAVLAIIG 158
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
89-346 8.57e-22

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 94.81  E-value: 8.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408  89 LVGFFVTLKMIPVTARYVLRRNMF----GFDINKRGTPQGdikvpesLGIVVGIVFLIVAIIFQYFnftedsnWLVEYNA 164
Cdd:COG0472    8 LLAFLLSLLLTPLLIRLARRLGLVddpnERKSHKRPTPRM-------GGIAIFLGFLLALLLLALL-------SNPELLL 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 165 ALASICFMILLGFVDDVLDVPWRVKLVLPSFATLPLLMAYAGHTTIVIPkplvayiGLEVLNLGRIYKLYMGLLAVFCTN 244
Cdd:COG0472   74 LLLGALLLGLIGFLDDLLGLSARQKLLGQLLAALLLVLLLLRITSLTIP-------FFGLLDLGWLYIPLTVFWIVGVSN 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 245 SINIHAGLNGLEIGQTVVIAAAILIHNvmqigasvdpeYHQAHAFSIFLTQPLMATSLAMLAYNWYPSSVFVGDTYTVFA 324
Cdd:COG0472  147 AVNLTDGLDGLAAGVSLIAALALAIIA-----------YLAGQGELALLAAALAGALLGFLWFNFPPAKIFMGDTGSLFL 215
                        250       260
                 ....*....|....*....|..
gi 318067408 325 GMTMAVVGILGHFSETLLIFFL 346
Cdd:COG0472  216 GFALAALAILGRQEGASLLLLL 237
GT_WecA_like cd06853
This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. ...
133-346 2.90e-16

This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.


Pssm-ID: 133463  Cd Length: 249  Bit Score: 77.91  E-value: 2.90e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 133 GIVVGIVFLIVAIIFQYFNFTEDSNWLveynAALASICFMILLGFVDDVLDVPWRVKLVLPSFATLplLMAYAGHTTIVI 212
Cdd:cd06853   13 GLAIFLGFLLALLLALLFPFFLLPELL----GLLAGATIIVLLGLLDDLFDLSPKVKLLGQILAAL--IVVFGGGVILSL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 213 PKPLvayiGLEVLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLEIGQTVVIAAAILIHNvmqigasvdpeYHQAHAFSIF 292
Cdd:cd06853   87 LGPF----GGGIILLGWLSIPLTVLWIVGIINAINLIDGLDGLAGGVALIASLALAILA-----------LLNGQVLVAL 151
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 318067408 293 LTQPLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGHFSETLLIFFL 346
Cdd:cd06853  152 LALALAGALLGFLPYNFHPARIFMGDAGSLFLGFLLAVLSILGTQKSSTAISPV 205
GT_MraY cd06852
Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the ...
118-345 1.89e-10

Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.


Pssm-ID: 133462  Cd Length: 280  Bit Score: 61.35  E-value: 1.89e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 118 KRGTPQGDikvpeslGIVVGIVFLIVAIIFqyFNFTEDSNWLVeynaALASICFMiLLGFVDDVLDV--------PWRVK 189
Cdd:cd06852    8 KAGTPTMG-------GILFILAILISTLLW--ADLDSPEVLLL----LLLTLGFG-LIGFLDDYLKVvkkrnlglSARQK 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 190 LVLPSFATLpLLMAYAGHTTIVIPKPLVAYIGLEVLNLGRIYKLYMGLLAVFCTNSINIHAGLNGLEIGQTVVIAAAILI 269
Cdd:cd06852   74 LLLQFLIAI-VFALLLYYFNGSGTLITLPFFKNGLIDLGILYIPFAIFVIVGSSNAVNLTDGLDGLAAGVSIIVALALAI 152
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 318067408 270 hnvmqigasVDPEYHQAHAFSIFLTQpLMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVGILGHfSETLLIFF 345
Cdd:cd06852  153 ---------IAYLAGNAVFLAVFCAA-LVGACLGFLWFNAYPAKVFMGDTGSLALGGALAALAILTK-QELLLLII 217
GT_MraY_like cd06912
This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like ...
138-332 2.68e-03

This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like family. This family contains both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases, which catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate. This is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. The three bacterial members MraY, WecA, and WbpL/WbcO, utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The prokaryotic enzyme-catalyzed reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly.


Pssm-ID: 133467  Cd Length: 193  Bit Score: 38.76  E-value: 2.68e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 138 IVFLIVAIIFQYFNFTEDSNWLveYNAALASICFMIllGFVDDVLD-VPWRVKLVlpsFATLPLLMAYAGHTTIVIPKPL 216
Cdd:cd06912   18 AIFLGLLAGLLLLSLLSGSLLL--LLLLAALPAFLA--GLLEDITKrVSPRIRLL---ATFLSALLAVWLLGASITRLDL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 318067408 217 VAYIGLEVLNLgrIYKLYMGLLAVFCTNSINIHAGLNGLEIGqTVVIAAAILIHNVMQIGASvdpeyhqahaFSIFLTQP 296
Cdd:cd06912   91 PGLDLLLSFPP--FAIIFTIFAVAGVANAFNIIDGFNGLASG-VAIISLLSLALVAFQVGDT----------DLAFLALL 157
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 318067408 297 LMATSLAMLAYNWYPSSVFVGDTYTVFAGMTMAVVG 332
Cdd:cd06912  158 LAGALLGFLIFNFPFGKIFLGDGGAYLLGFLLAWLA 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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