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Conserved domains on  [gi|315192843|gb|ADT90807|]
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Fem1c, partial [Xenopus laevis]

Protein Classification

ankyrin repeat domain-containing protein( domain architecture ID 11429852)

ankyrin repeat domain-containing protein; ANK proteins mediate specific protein-protein interactions without necessarily recognizing specific primary sequences which allows for one ankyrin repeat domain to recognize and bind to a variety of intracellular substrates and may be involved in a wide array of functions

Gene Ontology:  GO:0005515
PubMed:  17176038
SCOP:  4000366

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
89-163 9.56e-13

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 64.20  E-value: 9.56e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKNttcvgrypvckfpSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:COG0666  116 RDKDGETPLHLAAYNG-------------NLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGA 177
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
89-163 9.56e-13

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 64.20  E-value: 9.56e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKNttcvgrypvckfpSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:COG0666  116 RDKDGETPLHLAAYNG-------------NLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGA 177
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 89-163 1.20e-07

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 50.05  E-value: 1.20e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKNTTCVGRYpvckfpsfqvtaiLLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PHA03100 188 KDVYGFTPLHYAVYNNNPEFVKY-------------LLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP 249
Ank_2 pfam12796
Ankyrin repeats (3 copies);
97-160 2.34e-06

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 43.57  E-value: 2.34e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 315192843   97 LHLAVDKnttcvGRYPVCKFpsfqvtaiLLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVK 160
Cdd:pfam12796   1 LHLAAKN-----GNLELVKL--------LLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE 51
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 140-163 1.35e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 34.87  E-value: 1.35e-03
                           10        20
                   ....*....|....*....|....
gi 315192843   140 NSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:smart00248   3 RTPLHLAAENGNLEVVKLLLDKGA 26
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
89-163 9.56e-13

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 64.20  E-value: 9.56e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKNttcvgrypvckfpSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:COG0666  116 RDKDGETPLHLAAYNG-------------NLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGA 177
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
89-163 2.07e-12

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 63.43  E-value: 2.07e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKNttcvgrypvckfpSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:COG0666  149 QDNDGNTPLHLAAANG-------------NLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGA 210
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
76-163 7.25e-11

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 58.81  E-value: 7.25e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 315192843  76 KKQNIYRFLKLHPKGKNNFSPLHLAVDKNTTcvgrypvckfpsfQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIM 155
Cdd:COG0666   70 ALLLLAAGADINAKDDGGNTLLHAAARNGDL-------------EIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIV 136


                 ....*...
gi 315192843 156 NLLVKSGA 163
Cdd:COG0666  137 KLLLEAGA 144
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
89-163 8.79e-09

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 53.03  E-value: 8.79e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKnttcvGRYPVCKFpsfqvtaiLLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:COG0666  182 RDNDGETPLHLAAEN-----GHLEIVKL--------LLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGA 243
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 89-163 1.20e-07

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 50.05  E-value: 1.20e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843  89 KGKNNFSPLHLAVDKNTTCVGRYpvckfpsfqvtaiLLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PHA03100 188 KDVYGFTPLHYAVYNNNPEFVKY-------------LLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP 249
Ank_2 pfam12796
Ankyrin repeats (3 copies);
97-160 2.34e-06

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 43.57  E-value: 2.34e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 315192843   97 LHLAVDKnttcvGRYPVCKFpsfqvtaiLLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVK 160
Cdd:pfam12796   1 LHLAAKN-----GNLELVKL--------LLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE 51
Ank_2 pfam12796
Ankyrin repeats (3 copies);
91-165 5.52e-06

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 42.80  E-value: 5.52e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 315192843   91 KNNFSPLHLAvdknttcvgrypvCKFPSFQVTAILLECgADVNVRDaEQNSPLHVAALNNHPDIMNLLVKSGAHF 165
Cdd:pfam12796  28 KNGRTALHLA-------------AKNGHLEIVKLLLEH-ADVNLKD-NGRTALHYAARSGHLEIVKLLLEKGADI 87
Ank_4 pfam13637
Ankyrin repeats (many copies);
114-159 8.52e-06

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 41.11  E-value: 8.52e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 315192843  114 CKFPSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLV 159
Cdd:pfam13637   9 AASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 97-164 8.81e-06

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 44.57  E-value: 8.81e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 315192843  97 LHLAVDKNttcvgrypvckfpSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGAH 164
Cdd:PHA02874 128 LHYAIKKG-------------DLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAY 182
PHA03095 PHA03095
ankyrin-like protein; Provisional
 94-163 2.08e-05

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 43.47  E-value: 2.08e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 315192843  94 FSPLHLAVDKNTTcvgrYPVCKFpsfqvtaiLLECGADVNVRDAEQNSPLHV--AALNNHPDIMNLLVKSGA 163
Cdd:PHA03095  84 FTPLHLYLYNATT----LDVIKL--------LIKAGADVNAKDKVGRTPLHVylSGFNINPKVIRLLLRKGA 143
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 124-163 3.25e-05

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 42.96  E-value: 3.25e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 315192843 124 ILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PTZ00322 100 ILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGA 139
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 79-163 3.58e-05

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 42.73  E-value: 3.58e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 315192843  79 NIYRFLKLH-----PKGKNNFSPLHLAVDKNTTCVgryPVCKF---PSFQVTAI-----LLECGADVNVRDAEQNSPLHV 145
Cdd:PHA03100 122 SIVEYLLDNganvnIKNSDGENLLHLYLESNKIDL---KILKLlidKGVDINAKnrvnyLLSYGVPINIKDVYGFTPLHY 198

                         90
                 ....*....|....*...
gi 315192843 146 AALNNHPDIMNLLVKSGA 163
Cdd:PHA03100 199 AVYNNNPEFVKYLLDLGA 216
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 95-158 7.90e-05

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 41.81  E-value: 7.90e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 315192843  95 SPLHLAvdknttcvgrypvCKFPSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLL 158
Cdd:PTZ00322 117 TPLHIA-------------CANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
Ank_5 pfam13857
Ankyrin repeats (many copies);
125-164 1.01e-04

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 38.48  E-value: 1.01e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 315192843  125 LLECG-ADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGAH 164
Cdd:pfam13857   1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVD 41
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 125-163 2.99e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 40.05  E-value: 2.99e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 315192843 125 LLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PHA02876 361 LLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGA 399
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
121-163 3.85e-04

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 39.55  E-value: 3.85e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 315192843 121 VTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:COG0666   69 VALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGA 111
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 91-165 5.17e-04

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 39.26  E-value: 5.17e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 315192843  91 KNNFSPLHLAVDK--NTTCVGRypvckfpsfqVTAILLECGADVNVRDAEQNSPLHVAALN--NHPDIMNLLVKSGAHF 165
Cdd:PHA03100  66 KNNSTPLHYLSNIkyNLTDVKE----------IVKLLLEYGANVNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANV 134
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 125-163 6.77e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 39.18  E-value: 6.77e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 315192843 125 LLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PHA02874 110 ILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGA 148
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 120-163 9.72e-04

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 38.71  E-value: 9.72e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 315192843 120 QVTAILLECGADVNVRDAEQ-NSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PHA02878 148 EITKLLLSYGADINMKDRHKgNTALHYATENKDQRLTELLLSYGA 192
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 140-163 1.35e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 34.87  E-value: 1.35e-03
                           10        20
                   ....*....|....*....|....
gi 315192843   140 NSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:smart00248   3 RTPLHLAAENGNLEVVKLLLDKGA 26
PHA03095 PHA03095
ankyrin-like protein; Provisional
 89-164 2.36e-03

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 37.31  E-value: 2.36e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 315192843  89 KGKNNFSPLHLavdknttcvgrYPVCKFPSFQVTAILLECGADVNVRDAEQNSPLHVAALNNH--PDIMNLLVKSGAH 164
Cdd:PHA03095 113 KDKVGRTPLHV-----------YLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNanVELLRLLIDAGAD 179
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 121-163 3.00e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 37.35  E-value: 3.00e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 315192843 121 VTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGA 163
Cdd:PHA02876 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGA 202
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 91-164 3.23e-03

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 36.95  E-value: 3.23e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 315192843  91 KNNFSPLHLAVdknTTCVGRYPVCKFpsfqvtaiLLECGADVNVRDAEQNSPLHVAALNNHPD--IMNLLVKSGAH 164
Cdd:PHA03100 104 NNGITPLLYAI---SKKSNSYSIVEY--------LLDNGANVNIKNSDGENLLHLYLESNKIDlkILKLLIDKGVD 168
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 92-136 3.40e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 459634 [Multi-domain]  Cd Length: 34  Bit Score: 33.80  E-value: 3.40e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 315192843   92 NNFSPLHLAVDKNttcvGRYPVCKFpsfqvtaiLLECGADVNVRD 136
Cdd:pfam00023   1 DGNTPLHLAAGRR----GNLEIVKL--------LLSKGADVNARD 33
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 95-164 4.40e-03

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 36.78  E-value: 4.40e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 315192843  95 SPLHLAVDKnttcvgrypvckfPSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGAH 164
Cdd:PHA02878 170 TALHYATEN-------------KDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS 226
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 140-165 4.80e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 463933 [Multi-domain]  Cd Length: 30  Bit Score: 33.38  E-value: 4.80e-03
                          10        20
                  ....*....|....*....|....*.
gi 315192843  140 NSPLHVAALNNHPDIMNLLVKSGAHF 165
Cdd:pfam13606   3 NTPLHLAARNGRLEIVKLLLENGADI 28
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 89-164 6.73e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 36.09  E-value: 6.73e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 315192843  89 KGKNNFSPLHLAVDKNttcvgrypvckfpSFQVTAILLECGADVNVRDAEQNSPLHVAALNNHPDIMNLLVKSGAH 164
Cdd:PHA02874 153 EDDNGCYPIHIAIKHN-------------FFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNH 215
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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