|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-601 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 1074.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 1 MNLCPSLTLITLMILTYPIMTSLTDIHKNTPYILHVKLTTICAFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISL 80
Cdd:MTH00108 1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 81 KLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108 81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 161 RTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 241 TPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMN 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 401 TSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLQM 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 481 TMPTYLKMTALIMTILGLTLAMELNLMTNNLKLELPSHTLKFSNMLGFFPMITHRSTPLRNLTMSQNTAFLLLDLIWLEK 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 311088248 561 TMPKNLSQLQMLSSTTISNQKGLIKLYFLSSLISMLLALLI 601
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLL 601
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
9-603 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 893.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 9 LITLMILTYPIMTSLTDIHKNTPYIL-HVKLTTICAFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISLKLDYFST 87
Cdd:MTH00137 12 ILIFALLIYPLLTTLSPNPQKPNWALtHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 88 LFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTA 167
Cdd:MTH00137 92 IFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 168 ALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHNPNP-IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSAL 246
Cdd:MTH00137 172 ALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFDLtLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSAL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 247 LHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAF 326
Cdd:MTH00137 252 LHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAF 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 327 LHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNA 406
Cdd:MTH00137 332 LHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNA 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 407 WALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLQMTMPTYL 486
Cdd:MTH00137 412 WALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLL 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 487 KMTALIMTILGLTLAMELNLMTNNLKLELPSHTL-KFSNMLGFFPMITHRSTPLRNLTMSQNTAFLLLDLIWLEKTMPKN 565
Cdd:MTH00137 492 KLAALIVTILGLLIALELASLTNKQFKPTPTLPPhHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKG 571
|
570 580 590
....*....|....*....|....*....|....*....
gi 311088248 566 LSQLQMLSSTTISN-QKGLIKLYFLSSLISMLLALLIVI 603
Cdd:MTH00137 572 IASLQLPLITTTSNiQQGMIKTYLTLFLLTLALATLLLL 610
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
5-601 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 843.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 5 PSLTLITLMILTYPIMTSLTdIHKNTPYILHVKLTTICAFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISLKLDY 84
Cdd:MTH00004 6 NTTTLLTLLILLTPILLPLL-SKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 85 FSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDA 164
Cdd:MTH00004 85 YSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 165 NTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMlNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVS 244
Cdd:MTH00004 165 NTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFS-PTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVS 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 245 ALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL 324
Cdd:MTH00004 244 ALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 325 AFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNT 404
Cdd:MTH00004 324 AFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYL 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 405 NAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLQMTMPT 484
Cdd:MTH00004 404 NAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPT 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 485 YLKMTALIMTILGLTLAMELNLMTNNLKLELPSHTLKFSNMLGFFPMITHRSTPLRNLTMSQNTAFLLLDLIWLEKTMPK 564
Cdd:MTH00004 484 TTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPK 563
|
570 580 590
....*....|....*....|....*....|....*...
gi 311088248 565 NLSQLQMLSSTTISN-QKGLIKLYFLSSLISMLLALLI 601
Cdd:MTH00004 564 GLANLQLTASKTLTTlQKGLIKNYLTSFALTILLLLLL 601
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
6-601 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 804.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 6 SLTLITLMILTYPIMTSltdihKNTPYILHVKLTTICAFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISLKLDYF 85
Cdd:MTH00066 9 SSMILSLLLLILPLLLP-----KSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 86 STLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDAN 165
Cdd:MTH00066 84 SIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADAN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 166 TAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNhNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSA 245
Cdd:MTH00066 164 TAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLN-DNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 246 LLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLA 325
Cdd:MTH00066 243 LLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 326 FLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTN 405
Cdd:MTH00066 323 FFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLN 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 406 AWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLQMTMPTY 485
Cdd:MTH00066 403 SWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTF 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 486 LKMTALIMTILGLTLAMELNLMTNNLKLELPSHTlkFSNMLGFFPMITHRSTPLRNLTMSQNTAFLLLDLIWLEKTMPKN 565
Cdd:MTH00066 483 MKLAALLVTLLGLLIALDLAKITSKTTPKTKMHS--FSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKG 560
|
570 580 590
....*....|....*....|....*....|....*..
gi 311088248 566 LSQLQMLSSTTISN-QKGLIKLYFLSSLISMLLALLI 601
Cdd:MTH00066 561 LTNQQLPPIKTITNiQTGLIKTYLTLFLITLLLMLIL 597
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-603 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 664.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 1 MNLCPSLTLITLMILTYPIMTSLTdihkntPYILHVKLTTICAFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISL 80
Cdd:MTH00211 2 NTIFNSGFLLILILLLLPLLLPLN------NSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 81 KLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00211 76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 161 RTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNhNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00211 156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILN-LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 241 TPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGIN 320
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMN 400
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 401 TSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLQM 480
Cdd:MTH00211 395 GSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIL 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 481 TMPTYLKMTALIMTILGLTLAMELnlmTNNLKLELPSHTLKFSNMLGFFPMITHRSTPLRNLTMSQNTAFLLLDLIWLEK 560
Cdd:MTH00211 475 SLPFLLKLMPLLVTIVGLLLGLEL---VNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEK 551
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 311088248 561 TMPKNLSQLQMLSSTTISN-QKGLIKLYFLSSLISMLLALLIVI 603
Cdd:MTH00211 552 LGPKGLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILLLFL 595
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
45-603 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 543.41 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 45 LISLIPAALF-TFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLL 123
Cdd:MTH00208 67 FLSLINLLIWiLLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFM 203
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 LNHNPNP---IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCL 280
Cdd:MTH00208 227 LNNSNSFlinILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 281 GSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMG 360
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 361 GLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVP 440
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 441 TIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLqmTMPTYLKMTALIMTILGLTLAMELnLMTNNLKLELPSHTL 520
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPL--TLPLILKSLPLIVTIIGAAFSFSF-LLSLSSNPINSNFFS 543
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 521 KFSNMLgFFPMITHRSTPLRNLTMSQNTAFLLLDLIWLEKTMPKNLSQLQMLSSTTISN-QKGLIKLYFLSSLISMLLAL 599
Cdd:MTH00208 544 FLSNQW-FFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLtQTGYIKQYLLSSTLLFLLIL 622
|
....
gi 311088248 600 LIVI 603
Cdd:MTH00208 623 TLSL 626
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
38-501 |
6.45e-140 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 419.56 E-value: 6.45e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIpaALFTFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLF 117
Cdd:COG1009 36 LAPLAAFVLSLL--LFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWE 197
Cdd:COG1009 114 FAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 198 LQQMF-----MLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNM 272
Cdd:COG1009 194 FSELLaaaptILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPV 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 273 TQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLnN 352
Cdd:COG1009 274 WLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-G 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 353 EQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATS-LTAVYSTRMIFYTL 431
Cdd:COG1009 353 TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVF 432
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 311088248 432 MKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPL--------TTLQMTMPTYLKMTALIMTILGLTLA 501
Cdd:COG1009 433 FGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGLlapaavlgGELHLAHGLLLNALPLLLSLLGIALG 510
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
38-501 |
1.34e-128 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 391.06 E-value: 1.34e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIpaALFTFSGQE---MIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNI 114
Cdd:PRK06590 37 GLVGLSALLSLV--VFFDFLLGGgraFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 115 NLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMawFSMYSN 194
Cdd:PRK06590 115 RRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGI--FLLFAE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 195 --SWELQQMF-----MLNHNPNPIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHP 265
Cdd:PRK06590 193 fgSLNYDEVFaaapqFFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 266 MTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGS 345
Cdd:PRK06590 273 LFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGS 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 346 IIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMnTSNTNAWALMITLIATSLTAVYSTR 425
Cdd:PRK06590 353 VIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFR 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 426 MIFYTLMKQ-----------PRFM-VPTIInennsplinsikrLAIGSIFAGFFMsnnIPPLTTL------------QMT 481
Cdd:PRK06590 432 LIFLVFHGKekekihhphesPAVMtLPLIV-------------LAVLSVFAGALI---VPPFLGVlplttelahgeaEHH 495
|
490 500
....*....|....*....|
gi 311088248 482 MPTYLKMTALIMTILGLTLA 501
Cdd:PRK06590 496 LPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
43-501 |
2.43e-123 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 377.01 E-value: 2.43e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 43 AFLISLIPAALFTFSGQEMIISN--WHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKY 120
Cdd:TIGR01974 40 SAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAY 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 121 LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQ 200
Cdd:TIGR01974 120 LNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 201 MFML--NHNPNPIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTL 276
Cdd:TIGR01974 200 VFALapGAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 277 MLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDI 356
Cdd:TIGR01974 280 VTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDI 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 357 RKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPR 436
Cdd:TIGR01974 360 RKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKER 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088248 437 FMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLQMT----------MPTYLKMTALIMTILGLTLA 501
Cdd:TIGR01974 440 HEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPTsaepalehhhVPALEIWSPTAVAILGILLA 514
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
36-504 |
7.48e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 347.45 E-value: 7.48e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 36 VKLTTICAFLISLIPAALF----TFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPD 111
Cdd:MTH00020 28 AGILTSSCLIISLSWSFLIfyeiLFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGD 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 112 PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSM 191
Cdd:MTH00020 108 PHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 192 YSNSWELQQMF-MLNHNPNP---IPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMT 267
Cdd:MTH00020 188 RFGSLDFSSVFnMVVSAPSSditLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLF 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 268 ENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSII 347
Cdd:MTH00020 268 EQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVI 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 348 HSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMI 427
Cdd:MTH00020 348 HALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLI 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 428 FYTLMKQP--RFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNI-PPLTTLQMTMPTYLKMTALIMTILGLTLAMEL 504
Cdd:MTH00020 428 YLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIwSFQITLPPIVPLSIKLLPVFLSLGGIGLVIIL 507
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
41-501 |
8.55e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 344.68 E-value: 8.55e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 41 ICAFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKY 120
Cdd:MTH00210 37 VISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSY 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 121 LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQ 200
Cdd:MTH00210 117 LSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFST 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 201 MFML---NHNPNPIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQT 275
Cdd:MTH00210 197 ISSLlvtNINKESLTIICLLLfiGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 276 LMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQD 355
Cdd:MTH00210 277 IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQD 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 356 IRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQP 435
Cdd:MTH00210 357 MRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNT 436
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088248 436 RFMVPTIINENNSPLINSIKR--LAIGSIFAG-----FFMSNNIPPLttlqmtMPTYLKMTALIMTILGLTLA 501
Cdd:MTH00210 437 NSKKEVFIGVHESSWNITFPLllLAFGSIFVGylgkeVVLSNVIPPI------VPNSIKMIPLLFSLLGALLA 503
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
44-603 |
2.58e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 339.43 E-value: 2.58e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 44 FLISLIPAALFTFSGQEMIIsNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLL 123
Cdd:MTH00165 15 SLILFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYsNSWELQQM-- 201
Cdd:MTH00165 94 FVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF-GSWNFIFYld 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 202 FMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLcLG 281
Cdd:MTH00165 172 FMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFLLL-IS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 282 STTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGG 361
Cdd:MTH00165 251 LLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGG 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 362 LFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPT 441
Cdd:MTH00165 331 LSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLN 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 442 IINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLqMTMPTYLKMTALIMTILGLTLAMELNLMTNNLKLeLPSHTLK 521
Cdd:MTH00165 411 NLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYM-ICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNL-KSLKNYK 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 522 FSNMLG---FFPMITHRSTPLRNLTMSQNTaFLLLDLIWLEKTMPKNLSQLQMLSSTTISN-QKGLIKLYFLSSLISMLL 597
Cdd:MTH00165 489 LSSFLGsmwFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFLLWMII 567
|
....*.
gi 311088248 598 ALLIVI 603
Cdd:MTH00165 568 LLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-603 |
5.43e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 333.35 E-value: 5.43e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 44 FLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLL 123
Cdd:MTH00151 14 YSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVML 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMysnswELQQMFM 203
Cdd:MTH00151 94 FVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVL-----LGHWSIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 LNHNPNPIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLG 281
Cdd:MTH00151 168 SMWDFKLSGWLGLLLvlAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFIS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 282 STTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGG 361
Cdd:MTH00151 248 LLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGS 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 362 LFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPT 441
Cdd:MTH00151 328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 442 IINENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTLqMTMPTYLKMTALIMTILGLTLAMeLNLMTNNLKLELPSHTLK 521
Cdd:MTH00151 408 SKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEE-FFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLSFF 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 522 FSNMLGFFPMITHrstPLRNLTM-SQNTAFLLLDLIWLEKTMPKnlSQLQMLSSTTISNQKGLIKLYFLSSLISMLLALL 600
Cdd:MTH00151 486 FSSMWFLSPLSSQ---PLKSLSLkLSNSSMKSLDMGWLEILGGQ--GVFKANKSFSVLNESWPVKWFNFFIGLILLLVLF 560
|
...
gi 311088248 601 IVI 603
Cdd:MTH00151 561 LVV 563
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
53-602 |
7.14e-97 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 306.96 E-value: 7.14e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 53 LFTFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILV 132
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 133 TANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNsWelqQMFMLNHNPNPIP 212
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-W---NIFYLNFNSNLGS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 213 LMGLL--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAI 290
Cdd:MTH00209 176 VISVLivLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASM 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 291 CALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTA 370
Cdd:MTH00209 256 SANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITS 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 371 SSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPL 450
Cdd:MTH00209 336 ICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLN 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 451 INSIKRLAIGSIFAGFFMSNNIPPlTTLQMTMPTYLKMTALIMTILGLTLaMELNLMTNNLKLELPSHTLKFSNMLgFFP 530
Cdd:MTH00209 416 LKPMLVLTLGSITGGSVMSWVMVP-SVNSVVLPWFLKLLPIMLILFGVLL-MYMVLKKNFFLIKGYKVNYFLSQMW-FLP 492
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 311088248 531 MIThrSTPLRNLTMS-QNTAFLLLDLIWLEKTMPKNLSQLQMLSSTTISN-QKGLIKLYFLSSLISMLLALLIV 602
Cdd:MTH00209 493 DLS--SQPVNKFTMKlSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIiQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-589 |
6.46e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 289.17 E-value: 6.46e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTIC---AFLISLIPAALFTFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNI 114
Cdd:MTH00032 31 LSTICmgsSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHV 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 115 NLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAW------ 188
Cdd:MTH00032 111 PRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLiyktig 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 189 ---FSMYSNSWELQQMFMLNHN--------PNPIPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 255
Cdd:MTH00032 191 sldFLTFNGGSVGSGIMDRGYYgggayespLAPFAIIGILLliGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 256 GIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH-LAFLHICNHAF 334
Cdd:MTH00032 271 GVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAF 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 335 FKAMLFMCSGSIIHSLN-NEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIE---------------- 397
Cdd:MTH00032 351 FKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssl 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 398 --------------------SMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQP----RFMVPTIINENNSPLINS 453
Cdd:MTH00032 431 lkiqgdigikkddrgsiggpEGYPSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPnspkESLISSHINIVDKRVLTV 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 454 IKRLAIGSIFAGFFMSNNI------PPLTTLQMTMPTYLKMTALIMTILGLTLAMELNLMTNNLKLElPSHTLKFSNMLG 527
Cdd:MTH00032 511 LSLLCFGAIFVGYLIQDILigdiehPIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIG-PSFLLSIYSFLG 589
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 311088248 528 F---FPMITHRSTPLRNLTMSQNTAFLLLDLIWLEKTMPKNLSQLQMLSSTTISN-QKGLIKLYFL 589
Cdd:MTH00032 590 GawqGDHLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYAL 655
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-602 |
5.33e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 283.96 E-value: 5.33e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 44 FLISLIPAALFTFSGQEMIISnWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLL 123
Cdd:MTH00207 18 SILMFPLSLYLMMCNKTILIE-WEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAIIYNRIGDIGFILTMAWfSMYSNSWELqqMFM 203
Cdd:MTH00207 97 FVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLNQGHWSI--TNM 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 LNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGST 283
Cdd:MTH00207 173 WQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 284 TTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLF 363
Cdd:MTH00207 253 TMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 364 KTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTII 443
Cdd:MTH00207 333 NQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHL 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 444 NENNSPLINSIKRLAIGSIFAGFFMSNNIPPLTTlQMTMPTYLKMTALIMTILGLTLAMELNLMTNNLKLELPSHTLKFS 523
Cdd:MTH00207 413 EDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQE-EPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHF 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 524 NMLGFFPMITHRSTPLRNLTMSQNTAFL-LLDLIWLEKTMPKNLSQLQMLSSTTISNQKGLIKLYFLSSLISMLLALLIV 602
Cdd:MTH00207 492 ASCLMWFLVPLSSQFIMSTPMNLSHNYLkLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIM 571
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
43-430 |
1.48e-83 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 274.98 E-value: 1.48e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 43 AFLISLIPAALF--------TFSGQEMIISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNI 114
Cdd:PRK07376 42 VLLISLVGAAAVlsyallwsQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGY 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 115 NLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSN 194
Cdd:PRK07376 122 VRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 195 SWELQQMF-----MLNHNPNPIPLMGLL-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFH 264
Cdd:PRK07376 202 SFDFDGIAdrlseLVSSGAVSGWLALLLcilvfLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 265 PMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSG 344
Cdd:PRK07376 282 PVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 345 SIIHSLNN--------EQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWalMITLIAT 416
Cdd:PRK07376 362 SVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTA 439
|
410
....*....|....
gi 311088248 417 SLTAVYSTRMIFYT 430
Cdd:PRK07376 440 GMTAFYMFRMYFLT 453
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
128-430 |
2.94e-64 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 224.77 E-value: 2.94e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFM---- 203
Cdd:CHL00025 135 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifnn 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 --LNHNPNPIPL----MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLM 277
Cdd:CHL00025 215 liYNNEVNLLFAtlcaFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLI 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 278 LCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSL------- 350
Cdd:CHL00025 295 SLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgys 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 351 -NNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLII-ESMNTSNTNAWalmITLIATSLTAVYSTRMIF 428
Cdd:CHL00025 375 pDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAI---IAWSTAGLTAFYMFRIYL 451
|
..
gi 311088248 429 YT 430
Cdd:CHL00025 452 LT 453
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-415 |
4.39e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 210.55 E-value: 4.39e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 43 AFLISLIPAALFTF--------SGQEMIISNWHWmsIQTLKLSISLKLDYFSTLFipvALLVT---WSIMEFSTWYMQPD 111
Cdd:PRK12647 17 GWLLALLPLALFLYflsfipeiAAGETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGH 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 112 PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDI----GFILTMA 187
Cdd:PRK12647 92 PDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLallaGLILLGN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 188 WFSMYSNSWELQQMFMLNHNPNPIPLMGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPM 266
Cdd:PRK12647 172 VTGTYSLSELLASGDVIREHPLYLAILLLVLGgAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPV 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 267 TENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCS 343
Cdd:PRK12647 252 LGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVA 331
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088248 344 GSIIHSLNNeQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIA 415
Cdd:PRK12647 332 GIIDHETGT-RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-428 |
1.42e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 205.42 E-value: 1.42e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 43 AFLISLIPAALftfsGQEMIISNWHWMSiqTLKLSISLKLDYFSTLFipvALLVT---WSIMEFSTWYMQPDPNINLFFK 119
Cdd:PRK12648 41 VLLALLYPAVA----AGEVIRAEIEWLP--ALGLNLSLRLDGLAWLF---ALLILgigLLVVLYARYYLSPADPVPRFFS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 120 YLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGdiGFILtMAWFSMYSN---SW 196
Cdd:PRK12648 112 FLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSY 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 197 ELQQMF----MLNHNPNPIPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNN 271
Cdd:PRK12648 189 DLDVVLaagdLIRAHPLYPPALVLiLLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 272 MTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPhLAFL----HICNHAFFKAMLFMCSGSII 347
Cdd:PRK12648 269 EWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP-LAAVaaifHIINHATFKASLFMAAGIID 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 348 HslnnE---QDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLII-ESMNTSNTNAWALMITLIAT---SLTA 420
Cdd:PRK12648 348 H----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSV 423
|
....*...
gi 311088248 421 VYSTRMIF 428
Cdd:PRK12648 424 AYSLRFIH 431
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
76-430 |
8.37e-56 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 194.60 E-value: 8.37e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 156 GwWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQM-FMLNHNPNPIPLMGLLLAATG---KSAQFGLHP 231
Cdd:COG0651 148 A-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 232 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPM---TENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTS 307
Cdd:COG0651 227 WLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLlfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 308 SQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHSLnNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMP 384
Cdd:COG0651 306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 311088248 385 FLTGFYSKDLIIESMntSNTNAWALMITLIATS-LTAVYSTRMIFYT 430
Cdd:COG0651 385 PLSGFVSKWLLLQAA--LEAGAWLLAAVLLLSSlLTLAYFVRIFGRA 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
65-438 |
1.05e-55 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 203.35 E-value: 1.05e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 65 NWHWMSIQTL-----KLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQ 139
Cdd:PRK12650 55 TWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 140 LFIGWEGVGIMSFLLIGwwYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMF---MLNHNPNPIPLMGL 216
Cdd:PRK12650 135 LFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILhsdVWAEKPGLTTVVAV 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 217 LLA--ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALT 294
Cdd:PRK12650 213 LIAvaAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 295 QNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHSLNNeQDIRKMGGLFKTMPFTAS 371
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFV 371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088248 372 SLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAV----YSTRMIFYTLMKQPRFM 438
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPRDM 442
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
74-436 |
2.48e-53 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 195.06 E-value: 2.48e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 74 LKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFL 153
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 154 LIGWWYGRTDANTAALQAIIYNRIGDI----GFILTMAWFSMYSNSWELQQMFMLNHNPNPIPLMGL-LLAATGKSAQFG 228
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLamlgGLILLGKITGSFSIDAVIASADAIRNSPLFGTAMVLvLLGAFTKSAQFP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:TIGR00940 225 FHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTIS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 309 QLGLMMVTLGINQPHL----------------AFLHICNHAFFKAMLFMCSGSIIHSlNNEQDIRKMGGLFKTMPFTASS 372
Cdd:TIGR00940 305 QLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTL 383
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088248 373 LTVGSLALTGMPFLTGFYSKDLIIES------MNTSNTNAWALM---ITLIATSLTAVYSTRMIFYTLMKQPR 436
Cdd:TIGR00940 384 AMIASAAMAGVPPFNGFLSKEMFFAEaitahlVNPFDTVTLGYLfpyVATVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-398 |
9.55e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 182.13 E-value: 9.55e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQM-----FMLNHNP 208
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 209 NPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHP--MTENNNMTQTLMLClGSTTT 285
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLlyLPSSPFIQQILLIL-AIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGL 362
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGL 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 311088248 363 FKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIES 398
Cdd:pfam00361 239 AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAA 274
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
76-428 |
2.77e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 187.43 E-value: 2.77e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 156 gWWYGRTDANTAALQAIIYNRIGDIgFILTMAWFSMYSNSWELQQMFMLNhnpnpIPLMGLLLAATGKSAQFGLHPWLPS 235
Cdd:MTH00095 117 -LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSS-----SMILMLLLTSFTKSAQFPFSSWLPK 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 236 AMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTqTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVM-KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 316 TLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLI 395
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
|
330 340 350
....*....|....*....|....*....|...
gi 311088248 396 IESMNTSNTNAWALMITLIATSLTAVYSTRMIF 428
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWK 381
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-428 |
6.77e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 192.06 E-value: 6.77e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 44 FLISLIPAALFTFsgqemIISNW-----------HWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPD- 111
Cdd:PRK12644 28 YVLALVPAAAFVW-----VLAQWpavlaggapteVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDe 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 112 PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGD----IGFILtma 187
Cdd:PRK12644 103 PRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGlamlVGIII--- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 188 wFSMYSNSWELQQMfmLNHNPN----PIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF 263
Cdd:PRK12644 180 -LGQAAGTYRLSEL--LADPPTgpavSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 264 HPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH--LAFLH-ICNHAFFKAMLF 340
Cdd:PRK12644 257 APGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALF 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 341 MCSGSIIHSlNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIA----T 416
Cdd:PRK12644 337 LVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGivlgS 415
|
410
....*....|..
gi 311088248 417 SLTAVYSTRMIF 428
Cdd:PRK12644 416 ILTVAYSLRFLW 427
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
128-430 |
3.59e-51 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 188.98 E-value: 3.59e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDI----GFILtmawFSMYSNSWELQQMF- 202
Cdd:PRK12645 123 MLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LYIMTGSFSIREMIa 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 203 ---MLNHNPNPIPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLML 278
Cdd:PRK12645 199 nadEIQNSPLFIPAMILiLLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVT 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 279 CLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL----------------AFLHICNHAFFKAMLFMC 342
Cdd:PRK12645 279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMI 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 343 SGSIIHSLNNeQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESM------NTSNTNAWALMITLIA- 415
Cdd:PRK12645 359 VGIVDHETGT-RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlnateaNLFSLDTWGVLFPVIAw 437
|
330
....*....|....*..
gi 311088248 416 --TSLTAVYSTRMIFYT 430
Cdd:PRK12645 438 vaSVFTFVYSIIFIFKT 454
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
68-427 |
5.13e-50 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 185.34 E-value: 5.13e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 68 WMSIqtLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPD-PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEG 146
Cdd:PRK12646 64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 147 VGIMSFLLIGWWYGRTDANTAALQAIIYNRIGD----IGFILTMAWFSMYSNSWELQQMFMLNHNPNPIPLM-GLLLAAT 221
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIfMFLLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 222 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKI 301
Cdd:PRK12646 222 TKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 302 VAFSTSSQLGLMMVTLGIN-----QPHLAF------------LHICNHAFFKAMLFMCSGSIIHSlNNEQDIRKMGGLFK 364
Cdd:PRK12646 302 LAYSTISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQ 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088248 365 TMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESM-NTSNTNAWALMIT-------LIATSLTAVYSTRMI 427
Cdd:PRK12646 381 LFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtQTGQLSQFSLISMiiivfigVIASIFTFTYALYMV 451
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
128-423 |
1.20e-47 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 173.62 E-value: 1.20e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWwYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHN 207
Cdd:PRK06525 126 MAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 208 PNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhpMTENNNMTQT---LMLCLGSTT 284
Cdd:PRK06525 205 LKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPHVigyVGAVMAIVT 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 285 TLFTAICALTQNDIKKIVAFSTSSQLGLMMVTL--GINQPHLAF----LHICNHAFFKAMLFMCSGSIIHSLNNeQDIRK 358
Cdd:PRK06525 283 LLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPR 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088248 359 MGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYS 423
Cdd:PRK06525 362 LRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
38-425 |
2.70e-47 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 175.48 E-value: 2.70e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIpaALFTFSGQEMIISNWHWMSIQTLKLSISLKLdyfSTLFIPVALLVT---WSIMEFSTWYMQPDPNI 114
Cdd:PRK07390 45 LMTLLAFVHSLL--ALRAIWNQPPQQLSFPWLQVADLDLSLSLEI---SPVTLGALELITglsLLAQIYALGYLEKDWGL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 115 NLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSN 194
Cdd:PRK07390 120 ARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAG 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 195 SWELQQMFM----LNHNPNPIPLMGLLLAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFHPMTE 268
Cdd:PRK07390 200 TLNFSDLAAwaatANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 269 NNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIH 348
Cdd:PRK07390 279 LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIIL 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088248 349 SlNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSkdLIIESMNTSNTNAWALMITLIATSLTAVYSTR 425
Cdd:PRK07390 359 T-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA--LLRLADGLWAVSPWLVGVLLLVNALTAFNLTR 432
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-427 |
4.05e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 171.17 E-value: 4.05e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 156 GWWYGRTDANTAALQAIIYNRIGD----IGFILTMAWFSMYSNSWELQQMFMLN----HNPNPIPLMGLLLAATGKSAQF 227
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGlfmfAGFLLLHVITGTYDIATILQDSELIEnikgHPLFLITLILIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTS 307
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 308 SQLGLMMVTLGINQPH-------LAFLHICNHAFFKAMLFMCSGSIIHSLNNeQDIRKMGGLFKTMPFTASSLTVGSLAL 380
Cdd:PRK12649 312 SQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAM 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 311088248 381 TGMPFLTGFYSKDLIIES---MNTSNTNAWALMITLIATS---LTAVYSTRMI 427
Cdd:PRK12649 391 AGIPPLNGFLSKEMFYETsveMGALIGGPFTIIIPAVAVLggvFTFAYSIKLI 443
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
422-602 |
1.34e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 151.16 E-value: 1.34e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 422 YSTRMIFYTLMKQPRFMVPTIINENNSPLINSIKRLAIGSIFAGFFMSNNIPPlTTLQMTMPTYLKMTALIMTILGLTLA 501
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 502 MELNLMTNNLKLELPSHTL-KFSNMLGFFPMITHRSTPLRNLTMSQNTAfLLLDLIWLEKTMPKNLSQLQMLSSTTISN- 579
Cdd:pfam06455 80 LELSNLSNKQLKKSLNFNLhSFSGSMWFFPNLSHRLIPKLSLKLGQKLA-KQIDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
|
170 180
....*....|....*....|...
gi 311088248 580 QKGLIKLYFLSSLISMLLALLIV 602
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-435 |
1.24e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 140.01 E-value: 1.24e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVTWsimeFSTWYMQPDP-NINLFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAI----AALLYAIGYGeHRQTRFYALFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 153 LLIGwwYGRT-DANTAALQAIIYNRIGD------IGFILTMAWfsmYSNSWELQQMFmlnhNPNPIPLMGLLLAATG--- 222
Cdd:PRK08375 144 ALVA--MGGDrRALAAARKYLIVGLIGStflligVGLLYGVTG---TLNMADLAGAL----AENPTVVTAFGFVLLAlal 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 223 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR-----FHPMTENNNMTQTLMLCLGSTTTLFTAICALTQND 297
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 298 IKKIVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHSLNNeQDIRKMGGLFKTMPFTASSLT 374
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFA 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088248 375 VGSLALTGMPFLTGFYSKDLIIESMNtsNTNAWALMITLIATSLTAVYSTRMIFYTLMKQP 435
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLLALLYFLRIWYRAFFGP 432
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-448 |
1.68e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 140.11 E-value: 1.68e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 75 KLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK12667 73 PIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 155 IGWWYGRTDANTAALQ----------------AIIYNRIGDigfiLTMAWFSMYSNSWELQQMFMLNHNPNPIPLMGLLL 218
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKyaligavgttlyflalAFLYATFGT----LNMADLSAKIRGLSFPLTGGLAGNPPLALGVALAL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 219 AA---TGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF--------HPMTENNNMTQTLMLCLGSTTTL 286
Cdd:PRK12667 229 ALwafTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHSLNNeQDIRKMGGLF 363
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 364 KTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMItLIATSLTAVYSTRMIFYTLMKQPRFMVPTII 443
Cdd:PRK12667 387 RKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWYSLFFGKPKSGEEVEH 465
|
....*
gi 311088248 444 NENNS 448
Cdd:PRK12667 466 KESPS 470
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-427 |
5.07e-32 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 129.43 E-value: 5.07e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIPAALFTFSGQEM-IISNWHWmsIQTLKLSISLKLDYFSTLFIPVALLVTWSIMeFSTWYmQPDPNINL 116
Cdd:COG1008 37 AVSLLTLLLSLYLLAGFDPGTGGFqFVESYPW--IPSLGISYHLGVDGISLPLVLLTALLTPLAI-LASWN-EIKKRPKL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAIIYNRIGDIGF---ILTMAWFSmYS 193
Cdd:COG1008 113 YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMlvaILALYFLA-GA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 194 NSWELQQMFMLNHNPNP-IPLMGLLLAATG-KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFH-PMT-E 268
Cdd:COG1008 191 LTFDIAELAAAPLPLTAqLLLFLAFFIAFAvKVPMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFAlPLFpE 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 269 NNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMC 342
Cdd:COG1008 270 ASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFLL 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 343 SGSIIHSLNNeQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSLTAVY 422
Cdd:COG1008 347 VGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLG--AFQVNPWLAILAALGLILTAAY 423
|
....*
gi 311088248 423 STRMI 427
Cdd:COG1008 424 LLWMY 428
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
37-347 |
1.87e-31 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 128.28 E-value: 1.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 37 KLTTICAFLISLIPAALFTFSgqemiisnWHWMSIQTLKLSislkldyfsTLFIPVALLVT---WSIMEFSTWYMQPDPN 113
Cdd:PRK08168 36 QAASLAGLFLALLGLVLFATG--------AAWPAAAWLEVS---------GLGLVMAALVQllgWVIGRFSHRYLQGEPG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 114 INLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYS 193
Cdd:PRK08168 99 QRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEV 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 194 NSWELQQ-MFMLNHNPNPIPL----MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGiFLLIRFHPMTE 268
Cdd:PRK08168 179 GSLSLSAlWAHLAAQGASPSLqaaaLLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGG-FVLIRFAPLLE 257
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088248 269 NNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSII 347
Cdd:PRK08168 258 QAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
38-398 |
3.10e-30 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 126.00 E-value: 3.10e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIPAALFTFSGQEMIISNWHWMSiqtlKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWY---MQPDPNI 114
Cdd:PRK08667 35 LWLVIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 115 NLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSN 194
Cdd:PRK08667 111 NLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 195 SWElqqmFMLNHNPNPI---PLMGLLLAATGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFHPMTENN 270
Cdd:PRK08667 191 SFE----LSPLGASAGIlslVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSP 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 271 NMT-QTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGI-------NQPHLAFL-------HICNHAFF 335
Cdd:PRK08667 266 ELWwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALF 345
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088248 336 KAMLFMCSGSIIHSLNNeQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIES 398
Cdd:PRK08667 346 KSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
132-396 |
5.69e-29 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 121.54 E-value: 5.69e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 132 VTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHNPNPI 211
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 212 PLMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTEnnnmtqtLMLCLGSTTTLFTAIC 291
Cdd:PRK12668 189 ILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 292 ALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMCSGSIIHSLNnEQDIRKMGGLFKT 365
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAgigigtALAING---AVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRS 333
|
250 260 270
....*....|....*....|....*....|.
gi 311088248 366 MPFTASSLTVGSLALTGMPFLTGFYSKDLII 396
Cdd:PRK12668 334 MPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
128-398 |
1.47e-27 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 117.68 E-value: 1.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHN 207
Cdd:PRK06521 126 MVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLS 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 208 PnPIPLMGLLLAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FHPMTENNNMTQTLMLCLG 281
Cdd:PRK06521 206 P-FWASLVFLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWWGVLVLALG 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 282 STTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGI-------NQPHLAFL-------HICNHAFFKAMLFMCSGSII 347
Cdd:PRK06521 284 AISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLLFLGAGAVL 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 311088248 348 HSLNnEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIES 398
Cdd:PRK06521 364 HATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQS 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-467 |
2.62e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 115.96 E-value: 2.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 78 ISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:PRK08376 84 IIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 158 WYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQM-FMLNHNPNPIPLMGLLLAATG---KSAQFGLHPWL 233
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFIAGlamKSGAVPVHMWL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 234 PSAM-EGPTPVSALLHSSTmvVAGIFLLIR----FHPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 309 QLGLMMVTLGINQPHL---------------AFLHICNHAFFKAMLFMCSGSIIHSLNNeQDIRKMGGLFKTMPFTASSL 373
Cdd:PRK08376 322 QIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAF 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 374 TVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTiINENNSPLINS 453
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMN-VKEPPKPMLVP 477
|
410
....*....|....
gi 311088248 454 IKRLAIGSIFAGFF 467
Cdd:PRK08376 478 MLILAIAIIGMGLF 491
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
134-478 |
7.92e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 113.89 E-value: 7.92e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 134 ANNLFQLFIGWEGVGIMSFLLIGwwYGRTD-ANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMfmLNHNPNPIP 212
Cdd:PRK07234 113 CADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGL--ATADPEAFA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 213 L--MGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLmlcLGSTTTLFTAI 290
Cdd:PRK07234 189 LiaLGLLV----KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 291 CALTQNDIKKIVAFSTSSQLGLMMVTLGINqphlAFLHICnHAFFKAMLFMCSGsIIHSLNNEQDIRKMGGLFKTMPfta 370
Cdd:PRK07234 262 FALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYALA-HGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP--- 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 371 ssLTVGSLALTGMPFLTGFYSKDLIIesmntSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNSPL 450
Cdd:PRK07234 333 --LTMASFSIAGFPLLAGFVSKVLTL-----KNLLPWQAIALNLAAVGTAASFWKFIFLPFSADDEDKKPLPGFWNAIAL 405
|
330 340
....*....|....*....|....*...
gi 311088248 451 INSIKRLAIGSIFAGFFMSNNIPPLTTL 478
Cdd:PRK07234 406 LLGGLFLANGVYTEAYTLGNILKALLTI 433
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
82-428 |
1.63e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 113.10 E-value: 1.63e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 82 LDYFSTLFIPVALLVTWSIMEFSTWYMQPD--------PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFL 153
Cdd:PRK06458 67 IDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelspVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSAL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 154 LIGWwYGRTDANTAALQAIIYNRIGD----IGFILT--------------MAWFSMYSNSWELQQMFMLnhnpnpIPLMG 215
Cdd:PRK06458 147 LVGI-YRTRASLEAAWKYIIICSVGVafalFGTILVyanaatvmgdgemaILWTELLKHASLLDPTLMK------LAFVF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 216 LLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFHPMTE---NNNMTQTLMLCLGSTTTLFTAIC 291
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAFF 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 292 ALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHSLNnEQDIRKMGGLFKTMPF 368
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPL 377
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088248 369 TASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSLTAVYS-----TRMIF 428
Cdd:PRK06458 378 TGWGLMLGALAIAGMPPFGVFISEFLILTA--GLARGPLLIAILLLLLLTLAFAAlvrrvAGMVF 440
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-427 |
2.67e-26 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 112.55 E-value: 2.67e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPnINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK08377 70 VGINLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALT 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 156 GwwYGRT-DANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHNPNP----IPLMGLLLAATGKSAQFGLH 230
Cdd:PRK08377 149 A--YNKTgEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPtvaqVGLALLIFGLAVEAELFPLN 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 231 PWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-FHPMTENNNMTQTL--MLCLGSTTTLFTAICALTQNDIKKIVAFST 306
Cdd:PRK08377 227 AWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARiLYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 307 SSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQdIRKMGGLFKTMPFTASSLTVGSLALTGM 383
Cdd:PRK08377 306 IGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGI 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 311088248 384 PFLTGFYSKDLIIESmNTSNTNAWALMITLIATSLTAVYSTRMI 427
Cdd:PRK08377 385 PLFNVFWSKFRIILA-GLSAGYTWPVALVLGASVVEAVYYFRLI 427
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-428 |
5.30e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 111.83 E-value: 5.30e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVtWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTAN---NLFQLFIGWEGVGIMSF 152
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFL-WICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 153 LLIGwwYGRTDANTAALQ---AIIYNRIGDIGFILTMAWFSMYsNSWELQQMFMLNHNPNPIPLMgLLLAATGKSAQFGL 229
Cdd:PRK06589 154 FLIG--HTRNNISLSGGYkylKILMISALLLFLPAVILIYTKT-GNLDFVSGGLFSKNQSIILLL-MFIYGIAKTAIFPV 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 230 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTL------MLCLGSTTTLFTAICALTQNDIKKIVA 303
Cdd:PRK06589 230 HSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnwLIFIPIVSIFYSSLKALKTDNIKKILA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 304 FSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIhSLNNEQDIRKMGGLFKTMPFTASSLTVGSLAL 380
Cdd:PRK06589 310 YSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 311088248 381 TGMPFLTGFYSKDLIIESMNTSNtNAWALMITLIATSLTAVYSTRMIF 428
Cdd:PRK06589 389 IGIPIFSGFISKFLILLAASEQN-QPWLSIIVMLVVIASSILSALYLL 435
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
128-428 |
1.60e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 110.74 E-value: 1.60e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAIIYNRIGDIG-FILTMAWFSMYSNSWelqqmfmlnh 206
Cdd:MTH00063 89 MGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVClFLLIGLSCWGGSGSF---------- 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 207 npnPIPLMGLLLAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNMTQTLMLCLgSTTTL 286
Cdd:MTH00063 158 ---LCCLFFFLIVFT-KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL-LLTIF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLNNEQDIR-----KMGG 361
Cdd:MTH00063 233 ITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYG 312
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088248 362 LFktMPFTASSLTVGslaLTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIATSLTAVYSTRMIF 428
Cdd:MTH00063 313 SW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCL 374
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-427 |
7.20e-23 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 102.20 E-value: 7.20e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIPAALFTFSGQEMIISNWH-WmsIQTLKLSISLKLDYFSTLFIPV-ALLVTWSIMefSTWYMQpDPNIN 115
Cdd:PRK05846 37 IGTLLTLLLSLVLWIGFDSSNAGFQFVEKHpW--IPRFGISYHLGVDGISLLLVVLtALLTPLAVL--ASWEEI-KKRVK 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 116 LFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAIIYNRIGD----IGFILTMAWFSM 191
Cdd:PRK05846 112 FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSllmlVAIIYLVVVYYN 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 192 YSNSWELQQMFMLNHNPNP-IPLMGLLLAATG-KSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIR 262
Cdd:PRK05846 191 ATGTFDIADLLNLPLPPGVqYWLFLAFFIAFAvKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLR 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 263 FH-PMTEN-NNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTLGI---NQPHL--AFLHICNHAFF 335
Cdd:PRK05846 264 FSlPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLS 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 336 KAMLFMCSGSIIHSLNNEqDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIesMNTSNTNAWALMITLIA 415
Cdd:PRK05846 342 SAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTG 418
|
410
....*....|..
gi 311088248 416 TSLTAVYSTRMI 427
Cdd:PRK05846 419 LILAAVYSLWLY 430
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
76-398 |
2.54e-22 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 101.23 E-value: 2.54e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 76 LSISLKLDYFSTLFIPVALLVTWSIMEFST-WYMQPDPNINLFFKYLLLFLITMLIlvtANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSFMM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 155 IgwWYGRTDANTAALQAIIYNRIGDIGFIltMAWFSMYS-----NSWELQQMFMLNHNPNPIPLMGLLLAATG--KSAQF 227
Cdd:PRK08668 138 V--PMGKKESRKASLKYFVLSAIGAYAML--YAIFLIYAktgtfDFADISQGLINDTSTGFALIVFLFLLAFGvaKAGIF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 228 GLHPWLPSAM-EGPTPVSALLHS--STMVVAGIFLLIRFHPMTE---------NNNMTQTLMLCLGSTTTLFTAICALTQ 295
Cdd:PRK08668 214 PLHVWAPDAYsEAPQSFSAVLSGqlSKLGAYGFLLVLYVLPGTKlfsefgtyrGVPLFNYILAWLGNISIIVGTLMAILQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 296 NDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHSlNNEQDIRKMGGLFKTMPFTASS 372
Cdd:PRK08668 294 EDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAM 372
|
330 340
....*....|....*....|....*.
gi 311088248 373 LTVGSLALTGMPFLTGFYSKDLIIES 398
Cdd:PRK08668 373 YLVAIISLAGIPPMSGFASKWLIFEA 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
130-467 |
4.70e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 96.73 E-value: 4.70e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 130 ILVTaNNLFQLFIGWEGVGIMSFLLIGWWYGRTdANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHN-- 207
Cdd:PRK12662 126 ILVS-NDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDlp 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 208 PNPIPLMGLLLAATG---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FHPMTENNNMTQTL-----M 277
Cdd:PRK12662 204 TNRAIQIGVLFIMVGlfiKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYDVFKANFVFTTLpfnnvF 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 278 LCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHSLNNeQ 354
Cdd:PRK12662 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGT-T 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 355 DIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATS-LTAVYSTRMIFYTLMK 433
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA--FIKSNAWIGLVVLLVGSgLSVIYVWKIVEALYFE 439
|
330 340 350
....*....|....*....|....*....|....*.
gi 311088248 434 QPRF--MVPTIINENNSPLINSIKRLAIGSIFAGFF 467
Cdd:PRK12662 440 SRMVesKANDKAFKTPNAMVLCIWIMAILSIIVGIY 475
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
128-435 |
1.81e-19 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 91.72 E-value: 1.81e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQM---FML 204
Cdd:COG1007 115 MMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaaLAA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 205 NHNPNPIPLMGLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FHPMTENnnmTQT 275
Cdd:COG1007 195 GGANSPLLLLGLVLVLAGlafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRllveaFPGLAAD---WQL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 276 LMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHSLNN 352
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGE 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 353 EQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATS-LTAVYSTRMIFYTL 431
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSA--AVEAGLYWLAVIAVLNSvISAYYYLRVVKAMY 428
|
....
gi 311088248 432 MKQP 435
Cdd:COG1007 429 FDEP 432
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-428 |
4.05e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 90.78 E-value: 4.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 71 IQTLKL-------SISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIG 143
Cdd:PRK07691 57 IQTLELgnwkapfGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVF 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 144 WEGVGIMSFLLIGwwYGRTDAN-TAALQAIIYNRIGDIGFILTMAWfsMYS-----NSWELQQ--MFMLNHNPNPIPLMG 215
Cdd:PRK07691 137 FEVMLMASYVLIV--IGGTKIQlRESIKYVLINVVSSAFFVVAVAI--LYSvvgtlNMADISVkiAELSAGQTGLITVVA 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 216 LLLA---ATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNN--MTQTLMLCLGSTTTLFTAI 290
Cdd:PRK07691 213 ILFLfvfAT-KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDtsFTHYLILILALLTIIFGVI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 291 CALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHsLNNEQDIRKMGGLFKTMP 367
Cdd:PRK07691 292 GAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYP 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088248 368 FTASSLTVGSLALTGMPFLTGFYSKDLIIESmNTSNTNAWALMITLIaTSLTAVYSTRMIF 428
Cdd:PRK07691 371 VLGWMFFIAALSLAGIPPLSGFYGKFFIVEG-TFEAGFYVSGIIVLL-SSLLVLYSVIKIF 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
204-467 |
9.87e-18 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 86.54 E-value: 9.87e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 LNHNPNPIPLMGL----LLAATGKSAQFGLHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPM--TENNNMTQTLM 277
Cdd:PRK12663 197 LNDMGDTATLTTIallfLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLlfPQERELLHPLL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 278 LCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHsLNNEQ 354
Cdd:PRK12663 276 ATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYR 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 355 DIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQ 434
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQG--ALDNGAYILLALMLITSLITMYSLFRIFFLAYWG 432
|
250 260 270
....*....|....*....|....*....|...
gi 311088248 435 PRFMVPTIINENNSPLINSIKRLAIGSIFAGFF 467
Cdd:PRK12663 433 DKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIA 465
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
128-467 |
2.10e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 82.18 E-value: 2.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMF-MLNH 206
Cdd:PRK05777 116 MMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAkALAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 207 NPNPIPL----MGLLLAATG-KSAQFGLHPWLPSAMEG-PTPVSALLHSSTMVvAGIFLLIR-----FHPMTENNnmtQT 275
Cdd:PRK05777 196 GSGNSLLllfgLVFLLVGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLRllvvaFGGLSEDW---QQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 276 LMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHSLNN 352
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGE 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 353 EQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSL-TAVYSTRMIFYTL 431
Cdd:PRK05777 352 AESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEA--AVEAGLWWLAVIGVLNSAiGAFYYLRVIKLMY 429
|
330 340 350
....*....|....*....|....*....|....*.
gi 311088248 432 MKQPRfmVPTIINENNSPLINSIKRLAIGSIFAGFF 467
Cdd:PRK05777 430 FDEPP--RDAPVNWPLSAGGAVLSVSALLVLVLGIF 463
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
229-398 |
5.23e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 78.33 E-value: 5.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNNM-TQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTS 307
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 308 SQLGLMMVTLG-------INQPHLAFL-------HICNHAFFKAMLFMCSGSIIHSlNNEQDIRKMGGLFKTMPFTASSL 373
Cdd:PRK08042 279 ENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAM 357
|
170 180
....*....|....*....|....*
gi 311088248 374 TVGSLALTGMPFLTGFYSKDLIIES 398
Cdd:PRK08042 358 LVGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
134-391 |
1.26e-14 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.61 E-value: 1.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRtDANTAALQAIIYNRIGDIgFILT----MAwFSMYSNSWELQQMFMLNHnPN 209
Cdd:PRK12561 106 AQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILVaglaLA-LSGDTFTFDLAELGAKSY-PL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 210 PIPLM---GLLLAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRFH-PMTENNNMT-QTLM 277
Cdd:PRK12561 182 ALELLlyaGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFNvQMLPDAHVYfAPAL 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 278 LCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMCSGSI---IH 348
Cdd:PRK12561 255 AILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLgiaaftDLGISG---AMLQMISHGLIAAALFFLTGVTyerTH 331
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 311088248 349 SLNneqdIRKMGGLFKTMP-----FTASSLtvGSLALTGMpflTGFYS 391
Cdd:PRK12561 332 TLS----IPNMGGLAKVMPktfalFTASSM--ASLALPGM---SGFVS 370
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
223-421 |
1.71e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.33 E-value: 1.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 223 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPMTENNNMTQT---LMLCLGSTTTLFTAICALTQNDI 298
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQfsnVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 299 KKIVAFSTSSQLGLMMVTLGINQPHLAF---LHICNHAFFKAMLFMCSGsIIHSLNNEQDIRKMGGLFKTMPFTASSLTV 375
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 311088248 376 GSLALTGMPFLTGFYSKDLIIesMNTSNTNAWALMITLIATSLTAV 421
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFIL--LQLGGISVWLVLAVLLLLLLAAS 420
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
164-347 |
2.09e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 75.84 E-value: 2.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 164 ANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMF----MLNHNPNPIPLMGLL--LAATGKSAQFGLHPWLPSAM 237
Cdd:PRK08601 152 AREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLsnenLAQLGTWEKTGINLLliLAVMIPAAQWPFQRWLIESA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 238 EGPTPVSALLHSStMVVAGIFLLIRFHPMTeNNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTL 317
Cdd:PRK08601 232 VAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQC 309
|
170 180 190
....*....|....*....|....*....|
gi 311088248 318 GINQPHLAFLHICNHAFFKAMLFMCSGSII 347
Cdd:PRK08601 310 ALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
201-428 |
2.51e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 75.45 E-value: 2.51e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 201 MFMLNHNPNPIPLMGLLLAATGKSAQFGLHPW--LPSAM--EGPTPVSALLHSS---TMVVAGIFLLIRFHPMTENNNmT 273
Cdd:PRK06277 187 NALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTFskfVLVALMLVIFKLFGGLSYFPS-A 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 274 QTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGsIIHSL 350
Cdd:PRK06277 266 QGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLGAG-IVSYR 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 351 NNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIE-SMNTSNTNAWALMITL-IATSLTAVYSTRMIF 428
Cdd:PRK06277 345 TKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQaAMQANMPELAIIMIIVsIGTFVSMMKAFYLIY 424
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-422 |
3.34e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 3.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 213 LMGLLLAATG-KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFHPMTENNNMTQTLMLCLGSTTTL 286
Cdd:PRK12665 211 LFAVLLVAFGiKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMV 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGsIIHSLNNEQDIRKMGGLF 363
Cdd:PRK12665 286 VGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLA 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 364 KTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTN-AWALMITLIATSLTAVY 422
Cdd:PRK12665 365 KASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWlAWALVAGGVVTSLLTLY 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
134-427 |
1.51e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 70.11 E-value: 1.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 134 ANNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAIIYNRIGDI----GFiLTMAWFSMYSN-SWELQQMFMLNHNP 208
Cdd:PRK06473 126 AQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF-LGLVWLSGASSfDYEPLRSHTLPLST 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 209 NPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF--HPMTENNNMTQTLMLCLGSTTT 285
Cdd:PRK06473 204 QLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVSV 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGsIIHSLNNEQDIRKMGGL 362
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 311088248 363 F---KTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSLTAVYSTRMI 427
Cdd:PRK06473 362 LnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRG--SFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
71-422 |
3.75e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 65.50 E-value: 3.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 71 IQTLKLSISLKLDYFSTLFIPVALLVTWsIMEFSTWYMQPDPNINLFFKYLLLFLITMLILvtANNLFQLFIGWEGVGIM 150
Cdd:PRK07363 66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRLYYSLILLINGGIAGALL--AQNLLLFFLFYELELIP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 151 SFLLIGWWYGRTDAnTAALQAIIYNRIGD---IGFILTMAWFSMYSN-SWELQQMFMLNHNPNPIPLMGLLLAATGKSAQ 226
Cdd:PRK07363 143 FYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVWLSGSTSfDYDAISTQNLSLNTQLILLTGLLLGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF--HPMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAF 304
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 305 STSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGsIIHSLNNEQDIRKMGGLF---KTMPFTASSLTVGSL 378
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGM 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 311088248 379 ALTGMPFLTGFYSKDLIIESmnTSNTNAWALMITLIATSLTAVY 422
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQG--SFSTFPIPTLLCIVASGLTAVY 422
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
191-413 |
6.13e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 60.99 E-value: 6.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 191 MYSNSWELQQMfmlnhnPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpMTENN 270
Cdd:MTH00112 79 WNTGQWDITQL------TNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 271 NMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHICNHAFFKAMLFMcsgsIIHSL 350
Cdd:MTH00112 148 SLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTT 222
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088248 351 NNEQdIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITL 413
Cdd:MTH00112 223 STKT-LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAM 284
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
223-482 |
6.35e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.94 E-value: 6.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 223 KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFH--PMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIK 299
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFdiPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 300 KIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFkaMLFMCSGS----IIHSLNNEQD-IRKMGGLFKTMPFTASSLT 374
Cdd:CHL00049 306 RMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLA 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 375 VGSLALTGMPFLTGFYSKDLIIESmntsntnAWA------LMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENNS 448
Cdd:CHL00049 384 LCLLSLGGIPPLAGFFGKLYLFWC-------GWQaglyflVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRS 456
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 311088248 449 PLI--NSIKR----LAIGSIFAGFFMSnniPPLTTLQMTM 482
Cdd:CHL00049 457 PLRsnNSIELsmivCVIASTIPGISMN---PIIAIAQDTL 493
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
78-423 |
9.10e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 61.48 E-value: 9.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 78 ISLKLDYFSTLFIPVALLVTWSIMEFSTwymqpdpninlffkylLLFLITMLIL-------VTANNLFQLFIGWEGVGIM 150
Cdd:MTH00226 103 ISIYFIILTGFIVPCSILISWHSVKYLT----------------KSFLICMLILefllyavFSVLDIFMFYILFEGVLIP 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 151 SFLLIGWWYGRTDANTAALQAIIYNRIGDIgfILTMAWFSMYSNSWELQQMFMLNHNPNPIP------LMGLLLAATGKS 224
Cdd:MTH00226 167 MYLILGIWGSREEKMQAAYYFFFYTLIGSV--LMLLCLFSLYNIHGTTDYLTLASCSHVVSEqtqkwiFLGIFLAMAVKI 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 225 AQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFH----PMTENNnmTQTLMLCLGSTTTLFTAICALTQNDIK 299
Cdd:MTH00226 245 PIFPFHIWLPKAhVEAPVAGSVLL-AGILLKLGGYGLVRLSwpilPLGAQN--LAPAVIAMGIVGIVYGSFATCRQIDVK 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 300 KIVAFSTSSQLGLMMVTL---GINQPHLAFLHICNHAFFKAMLFMCSgSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVG 376
Cdd:MTH00226 322 RLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVT 400
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 311088248 377 SLALTGMPFLTGFYSKDLIIesMNTSNTNAWALMITLIATSLTAVYS 423
Cdd:MTH00226 401 SLANVAVPPSGNFIGEYLSI--LSSFNWNPIIGVFVCSGVILSAVYS 445
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
68-115 |
9.32e-09 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 51.66 E-value: 9.32e-09
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 311088248 68 WMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNIN 115
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYA 48
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
141-421 |
3.07e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 56.64 E-value: 3.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 141 FIGWEGVGIMSFLLIGWWYGRtDANTAALQAIIYNRIGDIgFIL----TMAWFSMySNSWELQQMFMLNHNPNPIPLM-- 214
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMAFYGD-TPTFDMTALAAKDFGLGFQLLCya 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 215 GLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRFHP--MTENNNMTQTLMLCLGSTTT 285
Cdd:PRK02546 218 GLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLLRMNAgmLPDAHAQFAPLLIVLGVVNI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMCSGSI---IHSLNNEQdi 356
Cdd:PRK02546 291 IYAALTSFAQRNLKRKIAYSSISHMGFVLIgigsftDLGTSG---AMLQMISHGLIGASLFFLVGATydrTHTLMLDE-- 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088248 357 rkMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSntNAWALMITLIATSLTAV 421
Cdd:PRK02546 366 --MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATS--DAYTLPFRVVVVFLAAV 426
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
128-477 |
3.11e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 52.66 E-value: 3.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEgVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFmlnhn 207
Cdd:MTH00200 17 TLLTFSSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEML----- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 208 pNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNnmtqtLMLCLGSTTTLF 287
Cdd:MTH00200 91 -GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----ILLLLGLLSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHicnhaFFKAMLFMCSGSIIHSLNNEQDIRKMGGLFKTMP 367
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 368 FTASSLTVGSLALTGMPFLTGFYSKDLIIESMnTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRFMVPTIINENN 447
Cdd:MTH00200 239 ILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL-SKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRT 317
|
330 340 350
....*....|....*....|....*....|
gi 311088248 448 SPLINSIKRLAIGSIFAGFFMSNNIPPLTT 477
Cdd:MTH00200 318 KSNSNLLVGLLLLLSILGLPLTPQLLFLFF 347
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
131-429 |
3.92e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 53.03 E-value: 3.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 131 LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDAnTAALQAIIYNRIGDIgFILtMAWFSM--YSNSWELQQMFMLNHNP 208
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSI-FLL-IGVLGMglYGSNEPTLNFETLANQS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 209 NPIPL-----MGLLLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRFhpmtennNMT--- 273
Cdd:CHL00011 205 YPVALeilfyIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRI-------NMEllp 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 274 ------QTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLG-INQPHL--AFLHICNHAFFKAMLFMCSG 344
Cdd:CHL00011 271 hahsifSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAG 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 345 SI---IHSLNNEQdirkMGGLFKTMP--FTA-SSLTVGSLALTGMpflTGFYSKDLIIESMNTSntNAWALM----ITL- 413
Cdd:CHL00011 351 TSydrIRLVYLDE----MGGIAIPMPkiFTMfSSFSMASLALPGM---SGFVAELIVFFGIITS--QKYLLMpkilITFv 421
|
330 340
....*....|....*....|.
gi 311088248 414 --IATSLTAVYSTRM---IFY 429
Cdd:CHL00011 422 maIGMILTPIYLLSMlrqMFY 442
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
276-405 |
4.73e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 52.81 E-value: 4.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 276 LMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH-----LAFLHICNHAFFKAMLFMCSGSIIHSl 350
Cdd:PRK12664 203 ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR- 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 311088248 351 NNEQDIRKMGGLFKtMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTN 405
Cdd:PRK12664 282 TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
44-389 |
6.98e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 51.99 E-value: 6.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 44 FLISLIPAALFTFSGQEMIISNWHWMSIQTLKLS----------ISLKLDYFSTLFIPVALLVTWSIMEFStwymqpdpn 113
Cdd:MTH00204 40 LFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQwgplvfavdgVSLFFILLTTLLIPICILISWKSIKFL--------- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 114 INLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMawFSMYS 193
Cdd:MTH00204 111 FKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGI--FQLYS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 194 NSWELQQMFMLN----HNPNPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIR 262
Cdd:MTH00204 189 ITGTTDYQILLNiklpLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFLR 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 263 FH--PMTENNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTLGINQPHL-----AFLHICNHAFF 335
Cdd:MTH00204 262 FSwpLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFV 339
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 311088248 336 KAMLFMCSgSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGF 389
Cdd:MTH00204 340 SSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
129-392 |
1.17e-06 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.21 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 129 LILVTANNLFQLFIGWEGVGIMSFLLIGwwYGRTDA--NTAALQAIIYNRIGDIGFILTMAW---FSMYSNSWELQQMFM 203
Cdd:PRK02504 124 MFLSGATELVMIFISLETLSIASYLLTG--YMKRDPrsNEAALKYLLIGAASSAIFLYGSSLlygLSGGSTQLSAIALAL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 LNhNPNPIPLMGLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFhpmtennnmtqtLMLC 279
Cdd:PRK02504 202 IT-SPSLGLALALVFVIAGiafKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 280 LGSTTT----LFTA----------ICALTQNDIKKIVAFSTSSQLGLMMVTLGINqphlaflhicNHAFFKAM------- 338
Cdd:PRK02504 268 FPSFDEqwklLFTAlailsmvlgnVVALAQTSMKRMLAYSSIGQAGFVMIGLVAG----------TEAGYASMvfyllay 337
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088248 339 LFMCSGS----IIHSLNNEQD-IRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSK 392
Cdd:PRK02504 338 LFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
128-318 |
2.04e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 50.56 E-value: 2.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWygrTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSwelqqmFMLNHN 207
Cdd:PRK06459 85 MAIVLTSDNYLLFLAGWEIMTIPSYVAIALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGT------TNFSYL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 208 PNPIPLMGLLLAATGKSAQFGLH--PWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPMTENN--NMTQTLMLCLGS 282
Cdd:PRK06459 156 PSPVPLILASFGFIIKMGMMPFLvsEWLPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIpiGYFGLTILAIGA 234
|
170 180 190
....*....|....*....|....*....|....*.
gi 311088248 283 TTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLG 318
Cdd:PRK06459 235 FSILFGALYAYVSENVKGLLAFSTIENNGAILVALG 270
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
189-415 |
2.83e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 49.53 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 189 FSMYSNSWELQQMFMLNHnPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPmte 268
Cdd:MTH00070 72 FSSTINAWFTGEWTIMNM-QTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISH--- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 269 nnNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHICNHAFFKAMLFMCSGSIih 348
Cdd:MTH00070 148 --LLNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFLMLMNL-- 222
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088248 349 slnNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITLIA 415
Cdd:MTH00070 223 ---NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSA 286
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
42-426 |
2.85e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 49.94 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 42 CAFLISLIPAALFTFSGQEMIISNWHwmsiqtlKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYL 121
Cdd:MTH00206 24 STTFFSFLIALLFLLWFKWSSEVGWS-------FSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYIT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 122 LLFLITMLILVT--ANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAW--FSMYSNSWE 197
Cdd:MTH00206 97 LLIVLQLFLILFfsSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFlqNSLGSLSLY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 198 LQQMFMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPMTEN- 269
Cdd:MTH00206 177 ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGPs 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 270 NNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLM------MVTLGINQphlAFLHICNHAFFKAMLFmCS 343
Cdd:MTH00206 250 TKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVtagilsGSPWGFKG---ALLLMIAHGLVSSALF-CL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 344 GSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIesMNTSNTNAWALMITLIATSLTAVYS 423
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLII--TSLFSWSNFTLPLLGLGFLFTAIYS 403
|
...
gi 311088248 424 TRM 426
Cdd:MTH00206 404 LYM 406
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
183-422 |
8.25e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 48.39 E-value: 8.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 183 ILTMAWFSmysNSWelqqmfMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR 262
Cdd:MTH00041 74 ALIQAWLS---GSW------SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLIS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 263 FhpmteNNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHICNHAFFKAMLFmc 342
Cdd:MTH00041 145 I-----SNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIF-- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 343 sgsIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMntSNTNAWALMITLIATSLTAVY 422
Cdd:MTH00041 217 ---LIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCL--IQNNSILISIILIIGSLLSLF 291
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
9-313 |
1.79e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 47.66 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 9 LITLMILTYPIMTSLTDIHKNTPYILhvklTTICAFLISLIpaALFTFSGQemIISNWHWMSIQTLKLSISLKLDYFSTL 88
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPI----SISQSSLISLL--SLFLLNNH--WSSSWHNLSLSLATDSLSSPLIILSCW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 89 FIPVALLVTWSIMEFstwymQPDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAA 168
Cdd:MTH00044 73 LAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 169 LQAIIYNRIGDIGFILTMAWFSMYSNSWELQQMFMLNHNPNPIPLMGL-----LLAATGKSAQFGLHPWLPSA-MEGPTP 242
Cdd:MTH00044 148 LYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAhVEAPVA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 243 VSallhsstMVVAGIFL------LIR-----FHPMTENNNMTQTLMLCLGStttLFTAICALTQNDIKKIVAFSTSSQLG 311
Cdd:MTH00044 228 GS-------MILAAILLklggygLIRlinlfSLPSANNISFILIVFCCWGA---LITSIICLRQTDLKALIAYSSVGHMS 297
|
..
gi 311088248 312 LM 313
Cdd:MTH00044 298 LV 299
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
128-470 |
2.69e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.56 E-value: 2.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 128 MLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWELQQM-FMLNH 206
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYInLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 207 NPNP----IPLMGLLL--AATGKSAQFGLHPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFHPMTEnnnmtqtLML 278
Cdd:MTH00196 86 GQSFssvsVPIGYLLIivALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFsILVSIGLNVN-------ILL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 279 CLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGIN-----QPHLAFLhicnhaFFKAMLFMCSGSIIHSLNNE 353
Cdd:MTH00196 157 IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGsfesiQASLVYL------FIYIIMSICVFSIILALNVY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 354 QD-IRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALmITLIATSLTAVYSTRMIFYTLM 432
Cdd:MTH00196 231 KNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFL-LAVFCSVIAGVYYVRIVKILFF 309
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 311088248 433 KQPRFMVPTIINENNSPLINSIKRLAIGSI--FAGFFMSN 470
Cdd:MTH00196 310 QANSFLLISTKILKKENKINLRKALLIGFSlyLILFTILS 349
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-319 |
3.57e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 46.58 E-value: 3.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 52 ALFTFSGQEMIISNWHWM-SIQTLKLSISLKLDYFSTLF-------IPVALLVTWSIMEFStwymqpdpnINLFFKYLLL 123
Cdd:MTH00217 47 ASFDGEGQFQAIKKFEWIpGIEPVFGPVVFAVDGISIFFliltallTPICILISWNSIKFL---------IKEFLLCLLV 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIgFILtMAWFSMYSNSWELQQMFM 203
Cdd:MTH00217 118 IEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSV-FML-LGIFTLYSYAGTTDYQAL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 204 ----LNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRFH--PMTENN 270
Cdd:MTH00217 196 cclkIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFSwpLLPEAS 268
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 311088248 271 NMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTLGI 319
Cdd:MTH00217 269 EYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLGI 315
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
230-427 |
2.82e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 43.85 E-value: 2.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFHPMTennnmtQTLMLClGSTTTLFTAICALTQNDIKKIVAFSTS 307
Cdd:MTH00199 210 HMWAPDVYEGaPTITTALL--ATVPKIGVFsILVQIGPVT------NVVLIC-AVLSIIYGAIGALNQTKIKRLLAYSGI 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 308 SQLGLMMVTLGIN-----QPHLAFLHIcnhaffKAMLFMCSGSIIHSLNNEQD-IRKMGGLFKTMPFTASSLTVGSLALT 381
Cdd:MTH00199 281 GHMGFILFGVAIGsfesiQASLIYMII------YVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIA 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 311088248 382 GMPFLTGFYSKDLIIESMNTSntNAWALMITLIATSLTA-VYSTRMI 427
Cdd:MTH00199 355 GIPPLAGFLSKWLILLSGVSS--GYYLICIIAVLSSVIAgVYYVRVV 399
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
185-423 |
3.60e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 43.25 E-value: 3.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 185 TMAWFSmysNSWELQQMFmlnhnpNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFH 264
Cdd:MTH00135 76 TNAWLT---GQWDIQQMS------HPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIA 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 265 PMTennnmtQTLMLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHICNHAFFKAMLFMcsg 344
Cdd:MTH00135 147 PTN------PTLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFS-PSLTLLALLTYIIMTSSAFL--- 216
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088248 345 siIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTnawALMITLIAtsLTAVYS 423
Cdd:MTH00135 217 --TFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDL---PLTATLAA--LSALLS 288
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
227-422 |
6.26e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.18 E-value: 6.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPmtenNNMTQTLMLCLGSTTTLFTAICALTQNDIKKIVAFST 306
Cdd:MTH00144 101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLD----LYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 307 SSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHSLnneqdirKMGGLFKTMPFTASSLTVGSLALTGMPFL 386
Cdd:MTH00144 177 ISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDLGSLKPSYKTGLSIISLLLSLGGLPPF 249
|
170 180 190
....*....|....*....|....*....|....*.
gi 311088248 387 TGFYSKDLIIESMntSNTNAWALMITLIATSLTAVY 422
Cdd:MTH00144 250 LGFCSKLLVLISS--MESSPLLLILLLLLGSLISLF 283
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
203-433 |
6.65e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 41.97 E-value: 6.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 203 MLNHNPNPIPLMGLLLAATGKSAQFGLHP---WLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpmTENNNMTQTLMLC 279
Cdd:MTH00197 69 SLSFSNLYLSLLSVVLVILGLLLKLGAFPfhfWVPSVMESLSWFNCFLLATWQKLAPLLIL------AFNSSSFMGLLIC 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 280 lGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHIcnhAFFKAMLFMCSgsiIHSLNNEQDIRKM 359
Cdd:MTH00197 143 -SVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYL---IYFVIMFMLFL---FLSKNNLSSLNQQ 215
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 311088248 360 GGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWALMITlIATSLTAVYSTRMIFYTLMK 433
Cdd:MTH00197 216 YSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLI-LSTCFSLYYYLSLAYKSLIL 288
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
201-454 |
2.94e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.19 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 201 MFMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpmteNNNMTQTLMLCL 280
Cdd:MTH00160 78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL--------SYLINNNFIIII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 281 GSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHIcnhaffkaMLFMCSGSIIHSLNNEQ--DIRK 358
Cdd:MTH00160 150 IILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFL--------IYSIISLSIILLFNKFNifFLNQ 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 359 MGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMNTSNTNAWaLMITLIATSLTAVYSTRMIFYTLMKQPRFM 438
Cdd:MTH00160 222 LFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFL-LFILIMSSLITLYFYLRISYSSLMLNYNKN 300
|
250
....*....|....*.
gi 311088248 439 VPTIINENNSPLINSI 454
Cdd:MTH00160 301 KWNLKKKKNKFSLILN 316
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
208-437 |
3.06e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.15 E-value: 3.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 208 PNPIPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTENNnmtqtLMLCLGSTTTLF 287
Cdd:MTH00011 87 KNITALM-LLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILP-----MMTSMAAMSALA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 288 TAICALTQNDIKKIVAFSTSSQLGLMMVtLGINQPHLAFLHICNHAFFKAMLFMCSGSIihslnNEQDIRKMGGLFKTMP 367
Cdd:MTH00011 161 GGLGGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLMLLFAYL-----NAFSTKFNSKISSMSQ 234
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 368 FTASSLTVGSLALTGMPFLTGFYSKDLIIESMnTSNTNAWALMITLIATSLTAVYSTRMIFYTLMKQPRF 437
Cdd:MTH00011 235 TTSMSLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTF 303
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
38-430 |
3.63e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 40.28 E-value: 3.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 38 LTTICAFLISLIPAALFTFSGQEMIISNwHWMSIQtlklSISLKLDYFSTLFIPVALLVTWSIMefstwYMQPDPNINLF 117
Cdd:MTH00068 26 LTTTNSLIIAFLSLMWFNLPSETMNFTN-KYFGID----QISSPLLILTCWLLPLMILASQNHL-----KNEPINRQRTY 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNS-- 195
Cdd:MTH00068 96 ISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSls 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 196 ---WELQQMFMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFHP 265
Cdd:MTH00068 176 lilLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 266 MTENNNMTQTL-MLCLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFm 341
Cdd:MTH00068 249 LLTPLSKELSYpFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSfsgAIILMISHGLTSSALF- 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 342 CSGSIIHSLNNEQDIRKMGGLFKTMPFTASSLTVGSLALTGMPFLTGFYSKDLIIESMntSNTNAWALMITLIATSLTAV 421
Cdd:MTH00068 328 CLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSL--FNWSNWTILITGLGTLITAA 405
|
....*....
gi 311088248 422 YSTRMIFYT 430
Cdd:MTH00068 406 YTLYMFLMT 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
62-313 |
7.41e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 38.95 E-value: 7.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 62 IISNWHWMSIQTLKLSISLKLDYFSTLFIPVALLVTWSIMEFSTWYMQPDPNINLFFKYLLLFLITMLILVTANNLFQLF 141
Cdd:MTH00014 37 TLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFY 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 142 IGWEGVGIMSFLLIGWWYGRTDANTAALQAIIYNRIGDIGFILTMAWFSMYSNSWelqQMFMLNHNPNPIPLMGL----- 216
Cdd:MTH00014 117 IFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLMSSMEPPSIYLMNLwwlit 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 217 LLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPMTENNNMTQTLMLCLGSTT-TLFT 288
Cdd:MTH00014 194 ILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHINKSLSAPFSSISLVgAVIT 266
|
250 260
....*....|....*....|....*
gi 311088248 289 AICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:MTH00014 267 SLICIRQPDLKSLIAYSSVGHMGLM 291
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
129-313 |
8.40e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 39.05 E-value: 8.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 129 LILVTA---NNLFQLFIGWEGVGI-MSFLLIGWWYgrtdaNTAALQAIIYNRIGDIG------FILTMAWFSMYSNSWEL 198
Cdd:MTH00150 66 LILVLAfsvSSLLMFYFFFEASLIpTLLLILGWGY-----QPERLQAGMYMMLYTVGaslpllLVILWMSSSYGSSFMLL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088248 199 QQMFMLNHNPNPIPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPMTENNN 271
Cdd:MTH00150 141 ISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS 213
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 311088248 272 MTQTLML-CLGSTTTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:MTH00150 214 SSFSIFLiSLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLV 256
|
|
| |
