|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 779.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 81 QYHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 161 LVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088107 401 LITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKILMGPTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 645.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 81 QYHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 161 LVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088107 401 LITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKILMGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 594.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 81 QYHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 161 LVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088107 401 LITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.23e-179 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 510.27 E-value: 1.23e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFF-SDPLSSPLLILTMWLFPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 80 SQYHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 160 LLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 240 GYGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 320 GLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 311088107 400 MLITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKILMGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.95e-167 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 478.28 E-value: 2.95e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 3 KIIIPTIMLLPVTWYSTNPMVWINITLHSLTI-SLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIaLLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 82 YHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 162 VALSFIQNYMGTLNLFMVTYWSQEmanSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 242 GMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 322 TSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 311088107 402 ITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.06e-148 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 430.17 E-value: 3.06e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFL-NQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 80 SQYHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 160 LLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 240 GYGMMRITMILN-PLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 311088107 399 NMLITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKILM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
38-441 |
7.78e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 356.46 E-value: 7.78e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 38 SLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMASQYhlTKEPSQRKKHFLFTLISLQLFLIMTFTATELIM 117
Cdd:MTH00150 2 SLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 118 FYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWsnsLMWM 197
Cdd:MTH00150 80 FYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 198 ACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICL 277
Cdd:MTH00150 157 LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMST 357
Cdd:MTH00150 237 RQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 358 WWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLM 437
Cdd:MTH00150 317 WWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
....
gi 311088107 438 SMHI 441
Cdd:MTH00150 397 LLHW 400
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
5.49e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 355.23 E-value: 5.49e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNpmvWINITLHSLTISLTSLSFLNQtDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 81 QyhLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00163 77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 161 LVALSFIQNYMGTLNLFMVTYwsqemaNSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 311088107 401 LITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHI 441
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHW 429
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
9.03e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 331.56 E-value: 9.03e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 22 MVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEPSqrKKHFLFTLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKN--SKLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 102 LQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 182 WSQEMANSWsnsLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPF 261
Cdd:MTH00205 177 LNFSDFYLF---LYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 262 LMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 342 MLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGKSPY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 311088107 422 HTRNFNPSLTRENTLMSMHILPLLLLTLNPKILM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.02e-108 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 329.01 E-value: 1.02e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYsTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 81 qyHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
Cdd:MTH00014 80 --FKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 161 LVALSFIQNYMGTLNLFMVTYWSQEMansWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 321 LTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 311088107 401 LITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKIL 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-411 |
3.18e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 251.54 E-value: 3.18e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASqyhlTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWmACIMAFMIKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFL-AFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 298 IVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350
....*....|....*....|....*....|....
gi 311088107 378 ELFITVATFSWSNMTIILTGLNMLITATYSLYML 411
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-410 |
6.53e-72 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 235.48 E-value: 6.53e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASqyhlTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QTERLNAGLYFLFYTLVGSLPLLVALSFI----QNYMGTLNLfmvTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMV-CLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 294 MALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 311088107 374 NLIGELFITVATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
1.15e-71 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 234.06 E-value: 1.15e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASQYHLTKepsqRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QTeRLNAGLYFLFYTLVGSLPLLVAlsFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLA--ILGLYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMV-CLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 298 IVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 378 ELFITVATFSWSNMTIILTGLNMLITAtysLYMLTMTQR----GKSPYHTRNFNPSLTRENTLMSMHILPLLLLTLNPKI 453
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAA---AYMLTLYKRvffgELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNP 465
|
....*.
gi 311088107 454 LMGPTY 459
Cdd:TIGR01972 466 LLDLTE 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
47-410 |
4.18e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 230.32 E-value: 4.18e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 47 GNSNNFSSTFFS-DPLSSPLLILTMWLFPLTIMASQ---YHLTKEpsqrkkhFLFTLISLQLFLIMTFTATELIMFYILF 122
Cdd:MTH00217 66 GIEPVFGPVVFAvDGISIFFLILTALLTPICILISWnsiKFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 123 ESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNlfMVTYWSQEMANSWSNsLMWMACIMA 202
Cdd:MTH00217 139 EGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKELQY-FIFLGFFLS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 203 FMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTD 281
Cdd:MTH00217 216 LAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLL 361
Cdd:MTH00217 296 LKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLL 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 311088107 362 ASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00217 376 LVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-410 |
1.87e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 226.10 E-value: 1.87e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 56 FFSDPLSSPLLILTMWLFPLTIMASQyhltKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITR 135
Cdd:MTH00204 79 FAVDGVSLFFILLTTLLIPICILISW----KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 136 WGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTywsqeMANSWSNSLMWM--ACIMAFMIKMPLYGLH 213
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL-----NIKLPLSIQKWLlvGFFLSLAVKIPQIPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 214 LWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPF-LMVCLWGMVMTSLICLRQTDLKSLIAYSSVS 292
Cdd:MTH00204 230 IWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 293 HMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPS 372
Cdd:MTH00204 310 HMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLS 389
|
330 340 350
....*....|....*....|....*....|....*...
gi 311088107 373 INLIGELFITVATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00204 390 CNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
9.78e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.95 E-value: 9.78e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 192 NSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMVCLWGMVM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 272 TSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQS 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 311088107 351 LLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-409 |
2.90e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 210.16 E-value: 2.90e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 56 FFSDPLSSPLLILTMWLFPLTIMASqYHLTKEPSqrkKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILIS-WHSVKYLT---KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 136 WGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGT---LNLFMVTYWSQEMANSWsnslMWMACIMAFMIKMPLYGL 212
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPF 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 213 HLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSV 291
Cdd:MTH00226 250 HIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSV 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 292 SHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:MTH00226 330 AHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
330 340 350
....*....|....*....|....*....|....*...
gi 311088107 372 SINLIGELFITVATFSWSNMTIILTGLNMLITATYSLY 409
Cdd:MTH00226 410 SGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
96-441 |
2.98e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 165.08 E-value: 2.98e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 96 LFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSfiqnymgtLN 175
Cdd:MTH00094 65 LILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KN 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 176 LFMVTYWSQEMANSWSNSLMwmaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRitmILNPLTK 255
Cdd:MTH00094 137 FFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNF 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 256 FMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYE 335
Cdd:MTH00094 211 VYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYH 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 336 RIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNMLITATYSLYMLTMTQ 415
Cdd:MTH00094 291 ISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSF 370
|
330 340
....*....|....*....|....*.
gi 311088107 416 RGKSPYHTRNFNPSLTRENTLMSMHI 441
Cdd:MTH00094 371 MGKKFSNFNNFNVGLSLPLVFMMFNM 396
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-387 |
8.51e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 161.85 E-value: 8.51e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 52 FSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLisLQLFLIMTFTATELIMFYILFESTLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLL--LLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 132 IITRWGNQtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACImAFMIKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLV-GFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 212 LHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLgLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 290 SVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330
....*....|....*...
gi 311088107 370 PPSINLIGELFITVATFS 387
Cdd:COG0651 384 PPLSGFVSKWLLLQAALE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
1.62e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 162.51 E-value: 1.62e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASqYHLTKEPsqrkKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSnSLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 298 IVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 311088107 378 EL--FITVA-----TFSWSNMTIILTGLNMLITATYSLYML 411
Cdd:PRK12561 371 ELtvFLGITssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
3.28e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 148.32 E-value: 3.28e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 58 SDPLSSPLLILTMWLFPLTIMASqYHLTKEPsqrkKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA-WPVTFKP----KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 138 NQtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNsLMWMACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 218 KAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLgVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 297 VIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLI 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 311088107 377 GEL--FITVATFSWSNMT-----IILTGLNMLITATYSLYML 411
Cdd:PRK02546 398 AELmvFVGFATSDAYTLPfrvvvVFLAAVGVILTPIYLLSML 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-416 |
3.38e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 139.45 E-value: 3.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASQYHLtkepsQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSwSNSLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMVclWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLAT--WAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 296 LVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGL---QSLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 311088107 373 INLIGELFITVATFswsNMTIILTGLNMLITATYSLYMLTMTQR 416
Cdd:PRK06473 389 VGFIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNR 429
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
59-411 |
1.42e-35 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 137.77 E-value: 1.42e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASqYHLTKEPsqrkKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAA-WPVTRNS----RLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMG---TLNLFMVTYWSQEMAnswSNSLMWMACIMAFMIKMPLYGLHLW 215
Cdd:CHL00011 158 K-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNFETLANQSYPVA---LEILFYIGFLIAYAVKLPIIPLHTW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 216 LPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLM-VCLWGMVMTSLICLRQTDLKSLIAYSSVSHM 294
Cdd:CHL00011 234 LPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLViVGAIQIIYAASTSLGQRNLKKRIAYSSVSHM 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 295 ALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIhsRTMLLAR--GLQSLLPLMSTWWLLASLTNLALPPS 372
Cdd:CHL00011 314 GFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGM 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 311088107 373 INLIGEL-----FITVATFSWSNMTII--LTGLNMLITATYSLYML 411
Cdd:CHL00011 392 SGFVAELivffgIITSQKYLLMPKILItfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-435 |
1.53e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 123.67 E-value: 1.53e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASQYHLtkepsQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENT-----ERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSwSNSLMWMACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 219 AHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFLMVclWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAI--IGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 296 LVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088107 373 INLIGELFITVATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGKSPYHTRNFNPSLTRENT 435
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKI 451
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-406 |
1.59e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 120.37 E-value: 1.59e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 55 TFFSDPLSSPLLILTMWLFpltIMASQYHL-TKEPSQRKKHFLFtLISLQLFLIMTFTATeLIMFYILFESTLIPTLIII 133
Cdd:PRK08375 72 ELRADSLSALFLLVTSILA---IAALLYAIgYGEHRQTRFYALF-LLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 134 TRWGNQtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMvtywSQEMANSWSNSLMWMA-CIMAFMIKMPLYGL 212
Cdd:PRK08375 147 AMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMAD----LAGALAENPTVVTAFGfVLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 213 HLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKF----MAYPFLMVCLWGMVMTSLICLRQTDLKSLIAY 288
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 289 SSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLA 368
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 311088107 369 LPPSINLIGELFITVATFS---WSNMTIILTGlnMLITATY 406
Cdd:PRK08375 382 VPPTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
7.08e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 101.20 E-value: 7.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLisLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLG--LEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 139 QTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNL------FMVTYWSQEMANS----WSNSLMWMACIMAFMIKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsakIRGLSFPLTGGLAgnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 209 LYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-------TMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 311088107 362 ASLTNLALPPSINLIGELFITVATFSWSnmtIILTGLNMLITATYSL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISL 442
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.50e-21 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 89.12 E-value: 1.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFS-DPLSSPLLILTMWLFPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 311088107 80 SQYHLTKEPSQRKKHFLFTLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
28-398 |
8.42e-20 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 91.53 E-value: 8.42e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 28 TLHSLTISLT-----SLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKE--------PSQRKKH 94
Cdd:PRK06458 32 TLNVLGITLTlilalWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelspVTLRLYY 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 95 FLFtlislQLFL---IMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTlVGslpllVALSFIQNYM 171
Cdd:PRK06458 112 GMY-----QLFLftmLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICS-VG-----VAFALFGTIL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 172 GTLNLFMVT-------YWSQ--EMANSWSNSLMWMACIMA---FMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:PRK06458 181 VYANAATVMgdgemaiLWTEllKHASLLDPTLMKLAFVFLligFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 240 GYGMMRITMILNPLTKFMAYPFLMVC--LWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMV 317
Cdd:PRK06458 261 LYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHML 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 318 AHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFS---WSNMTII 394
Cdd:PRK06458 341 NHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILL 420
|
....
gi 311088107 395 LTGL 398
Cdd:PRK06458 421 LLLL 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
96-395 |
1.21e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 84.59 E-value: 1.21e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 96 LFTLISLqLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLN 175
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 176 lfmVTYWSQEMANSWsnsLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTK 255
Cdd:MTH00062 154 ---FSDWGSDDSVSL---IVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 256 FMaypFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMaLVIVAILIQTPWSFMGATALM-VAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 228 LG---YLFLCCLFSVFFLITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088107 335 ERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIIL 395
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
48-327 |
3.36e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 3.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 48 NSNNFSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLISLqlflIMTFTATELIMFYILFESTLI 127
Cdd:PRK08668 57 FFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGV----LGVFLANDLLTLYIFWEIMTF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 128 PTLIIITRwGNQTERLNAGLYFLFyTLVGSLPLLVALSFIQNYMGTLNLFMVtywSQEMANSWSNSLMWMAC--IMAFMI 205
Cdd:PRK08668 133 SSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADI---SQGLINDTSTGFALIVFlfLLAFGV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 206 -KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGM------MRITMILNPLTKFMAYP---FLMVCLWGM--VMTS 273
Cdd:PRK08668 208 aKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvlyvLPGTKLFSEFGTYRGVPlfnYILAWLGNIsiIVGT 287
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 311088107 274 LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLF 327
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-412 |
3.56e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.77 E-value: 3.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 52 FSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 131 IIITRWGNQTERLNAGLYFLFYTLVGSLplLVALSFIQNYMGTLNlfmvTYWSQEMANSWSNSLMWMACIMAFMIKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTV--FLMLGIIVLFIQTGS----FELSPLGASAGILSLVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 211 GLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRItmILNPLTKFMAYPFLMVCLwGMVMTSL---ICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLA-GSISALLgviYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 288 YSSVSHMALVIVAILIQTPWSFMGATALM-----------VAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMS 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088107 357 TWWLLASLTNLALPPSINLIGELFITVATFswSNMTIILTGLNMLITATYSLYMLT 412
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF--QSFSVADPLIKILLFSVLAIFALT 433
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
4.52e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 74.23 E-value: 4.52e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 108 MTFTATELIMFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMA 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 188 NSWSNSLMWMAcIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPlTKFMAYPFLMVCLW 267
Cdd:PRK12665 205 SGTRTALFAVL-LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 268 GMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFcLANSNYERiHSRTMLLAR- 346
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-QAGSSSLRRl 360
|
250 260 270
....*....|....*....|....*....|....*
gi 311088107 347 -GLQSLLPLMSTWWLLASLtNLA-LPPSINLIGEL 379
Cdd:PRK12665 361 gGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
4.90e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.83 E-value: 4.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 52 FSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEpsqRKKHFLFTLIslqLFLIM----TFTATELIMFYILFESTLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 128 PTLIIITRWGNQTErLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSN--SLMWMACIMAFMI 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGliTVVAILFLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 206 KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340 350
....*....|....*....|....*....|....
gi 311088107 365 TNLALPPSINLIGELFITVATFSWSNMTIILTGL 398
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-387 |
1.27e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 72.49 E-value: 1.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 104 LFLIMTFTATELIM------FYILFESTLIpTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 178 MVTYWSQEMaNSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFM 257
Cdd:PRK08377 192 HIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 258 AYPFLMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLVIIMATLtvFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 311088107 336 RIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFS 387
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-427 |
2.06e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 72.16 E-value: 2.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 51 NFSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 131 IIITrWGNQTERLNAGLYFLFYTLVGSLPL-LVALSFIQNYMGTLNLfmVTYWSQEMANSWSNSLMWMACImafmIKMPL 209
Cdd:PRK06589 154 FLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDF--VSGGLFSKNQSIILLLMFIYGI----AKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 210 YGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMI---LNPLTKF--MAYPFLMVCLWGMVMTSLICLRQTDLKS 284
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 285 LIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088107 365 TNLALPPSINLIGELFITVATFSWSNMT--IILTGLNMLITATYSLYMLTMTQRGKSPYHTRNFN 427
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLLKILSSIYKPSLSENSF 451
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-418 |
3.43e-13 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 71.71 E-value: 3.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 95 FLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 175 NLFMVTYWSQEMANS-WSNSLMWMACIMAFMiKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNp 252
Cdd:PRK12646 192 NITEILGQADHIKNHgLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 253 LTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAI-----LIQTPWSFMGATALMVA--------- 318
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmn 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTnLALPPSIN--LIGELFIT--VATFSWSNMTII 394
Cdd:PRK12646 349 HAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFLDalTQTGQLSQFSLI 427
|
330 340 350
....*....|....*....|....*....|.
gi 311088107 395 LTGLNMLI-------TATYSLYMLTMTQRGK 418
Cdd:PRK12646 428 SMIIIVFIgviasifTFTYALYMVKEVFWGK 458
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-327 |
1.03e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.78 E-value: 1.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 93 KHFLFTLISLQLFLIMTFTATELIMFYILFE-STLIPTLIIITRwgNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYM 171
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAMIFAFIGLIFLFSLT 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 172 ------GTLNlfmvtyWSQ--EMANSWSNSLMWMACIM---AFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:PRK08676 180 rqalgtGTLN------WTElaAHASLLSPSVLGASFLFifiGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGI 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITMILNPLTKFMAYPFLMVCLwGMVMTSLIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMV 317
Cdd:PRK08676 254 YGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
250
....*....|
gi 311088107 318 AHGLTSSMLF 327
Cdd:PRK08676 333 AHSLVKSGLF 342
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-423 |
1.32e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 69.80 E-value: 1.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSwsnSL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSS---PL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 195 MWMACIMAF---MIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitmiLNPLtkFMAYPFLM-----VC 265
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLtvvaiIG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 266 LWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLA 345
Cdd:COG1009 283 AITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 346 RGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNML---ITATYSLYMLTMTQRGKSPYH 422
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVFFGKPRPK 439
|
.
gi 311088107 423 T 423
Cdd:COG1009 440 T 440
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-404 |
4.56e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 68.41 E-value: 4.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTywsqEMANSWSNSL 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELL----ASGDVIREHP 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 195 MWMACIMAFMI----KMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRitmiLNPLTKFMAYPFLMVCLWG- 268
Cdd:PRK12647 193 LYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGg 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 269 --MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK12647 268 ltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLG 347
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088107 347 GLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGL----NMLITA 404
Cdd:PRK12647 348 GLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAavlgNALMVA 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-339 |
6.89e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 67.28 E-value: 6.89e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 6 IPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDgnsnNFSSTFFSDPLSSpLLILTMWLfpLTIMASQYHLT 85
Cdd:PRK07234 17 FAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLD----NFGVTLRADALSG-YFILTNAL--VTLAVIFYCWE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 86 kepSQRKKHFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITrWGNQTERLNAGLYFLFYTLVGSLPLLVALS 165
Cdd:PRK07234 90 ---SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 166 FIQNYMGTLNLfmvtywsQEMANSWSNSLMWMAciMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMR 245
Cdd:PRK07234 166 LVYQANGTFAF-------SGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 246 ITMILNPLTKFMAYPFLMVCLWGmvmtSLICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsfmgATALMVAHGLTSSM 325
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKST 304
|
330
....*....|....
gi 311088107 326 LFCLANSNYERIHS 339
Cdd:PRK07234 305 LFLCAGALPSRNFT 318
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-401 |
1.15e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 66.54 E-value: 1.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 111 TATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMAnsw 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLK--- 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 191 snSLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITMILNPLTKFMAYPFLMVCLWGM 269
Cdd:PRK06525 207 --YLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 270 VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 311088107 347 GLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITVATFSWSNMTIILTGLNML 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-371 |
1.78e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 66.60 E-value: 1.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 96 LFTLISLQLFLimtftATELIMFYILFESTLIPTLIIITRWGNQTErlNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLN 175
Cdd:PRK12650 118 AFMAAMLLLVL-----ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 176 LFMV---TYWSQemaNSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNP 252
Cdd:PRK12650 191 LSGIlhsDVWAE---KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 253 LTKFMAypFLMVClwGM---VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCL 329
Cdd:PRK12650 268 VAVWNW--LLIIV--GMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFML 343
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 311088107 330 ANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12650 344 IGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-371 |
1.86e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 66.07 E-value: 1.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 145 AGLYFLFYTLVGSLPLLVALSFIQNYMGTLnlfmvTYWSQEMAN--SWSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVE 222
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSY-----DFAAMRAAHlsPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHPA 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 223 APIAGSMILAAILLKLGGYGMMRITM-ILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVA- 300
Cdd:PRK06521 240 APSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGl 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 301 ----ILIQTPWSFMGATALMVA------HGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALP 370
Cdd:PRK06521 320 glamVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALP 399
|
.
gi 311088107 371 P 371
Cdd:PRK06521 400 P 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
39-323 |
6.83e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 63.98 E-value: 6.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 39 LSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLISLqLFLIMTFTATELIMF 118
Cdd:COG1007 49 LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFAT-LGMMLMASANDLLTL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 119 YILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLVGSLpLLVALSFIQNYMGTLNLFMVtywSQEMANSWSNSLMWM 197
Cdd:COG1007 128 FLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAGI---AAALAAGGANSPLLL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 198 ACiMAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMILAAILlKLGGYGM-MRITMI-LNPLTKFMAYPFLMVCLWGMV 270
Cdd:COG1007 204 LG-LVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLAVLSMT 281
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 311088107 271 MTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTS 323
Cdd:COG1007 282 VGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-397 |
1.55e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 1.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASQYHLTKEPSQRKKHFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTLIIITRwG 137
Cdd:PRK12662 75 DILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGgLLGILVSNDVFNIYVFLEISSISSYVLVAM-G 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 138 NQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK12662 154 RDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 218 KAHVEAPIAGSMILAAILLKLGGYGMMRITM-ILNPLTKFMAYPF----LMVCLWGMVMTSLICLRQTDLKSLIAYSSVS 292
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 293 HMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK12662 314 HIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPT 393
|
330 340
....*....|....*....|....*...
gi 311088107 373 INLIGELFI---TVATFSWSNMTIILTG 397
Cdd:PRK12662 394 SGFVAKWYIldaFIKSNAWIGLVVLLVG 421
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-408 |
7.02e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.12 E-value: 7.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 52 FSSTFFSDPLSSpLLILTMWLFPLTIMAsqYHLTKEPSQRKKHFLFTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDIEHSGRRYGFPPFILLLMAgVIGSFLTGDLFNLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 131 IIITrWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLY 210
Cdd:PRK12663 146 VLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 211 GLHlWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPLTKFMAYPFL--MVCLwGMVMTSLICLRQTDLKSLIAY 288
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 289 SSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLA 368
Cdd:PRK12663 303 QVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 311088107 369 LPPSINLIGELFITVATFSWSNMTIILTGLNMLITATYSL 408
Cdd:PRK12663 383 LPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
2.47e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 59.46 E-value: 2.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 155 VGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMAnswSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 235 LLKLGGYGMMRITMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV-------IVAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 307 ---WSFMGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPPSINLIGELFITV 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 311088107 384 ATFSWSNMTIILTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-371 |
6.57e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.80 E-value: 6.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 82 YHLTKEPSQRKKHFLFTLIsLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLL 161
Cdd:PRK08376 111 ISYMKHDTGLDKYYTLILL-LELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 162 VALSFIQNYMGTLNLFMVTYWSQEMANSWSNSLMWMaCIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAIllKLGG- 240
Cdd:PRK08376 190 LGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALAL-FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI--KQAGl 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 241 YGMMRITM-ILNPLTKFMAYPFLMVCL--WGMVMTSLICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQTPWSFMG 311
Cdd:PRK08376 267 YALARVLFsIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGDPAMASYG 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 311088107 312 ATAL------MVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK08376 347 EIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
102-327 |
9.44e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 54.52 E-value: 9.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 102 LQLFL---IMTFTATELImfyilfestliptliiitrWGNQTER-LNAGL-YFLFYTLVGSLpLLVALSFIQNYMGTlnl 176
Cdd:PRK12668 116 LTLFVfweLMAFTSTFLV-------------------WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGS--- 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 177 FMVTYWSQEMANSWsnslmWMACImAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRI---TMILNPL 253
Cdd:PRK12668 173 FAFGAIAGLGGTAA-----WLILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLIYI 246
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 311088107 254 TKFMA-YPFLMVCLwgmvmtsliclrQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLF 327
Cdd:PRK12668 247 GAAMAvYGVFFALL------------ENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
2.26e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 53.39 E-value: 2.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 111 TATELIMFYILFESTLIPTLIIItrwGNQTERLN---AGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLfmvtywSQEMA 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRL------SELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 188 NSWSNSLMWMA--CIMA-FMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITmilnPLTKFMAYPFLM 263
Cdd:PRK12644 195 DPPTGPAVSVAvvLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPVWRPT 269
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088107 264 VCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLF 327
Cdd:PRK12644 270 VLVLGlatMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
31-408 |
3.29e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 52.67 E-value: 3.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 31 SLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSspLLILTMWLF-PLTIMA-SQYHLTKEPsqRKKHFLFTLISLQLFLIM 108
Cdd:MTH00208 78 LLGCPNINISLSNWLSNTLFNFSLSFIFDFYF--ILFFSVALFvTWSIIEfSHYYMSNDP--NKNAFFRLLIIFLLNMLI 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 109 TFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMVTYWSQEmaN 188
Cdd:MTH00208 154 LTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNS--N 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 189 SWSNSLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MILAAILLklggygMMRITMILNPLTKFmaypf 261
Cdd:MTH00208 232 SFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWF----- 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 262 LMVCLWGMVMTSL----ICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSfmgATALMVAHGLTSSMLFCLANSnyeRI 337
Cdd:MTH00208 300 LSLCLILGSLTALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTHAFFKAMLFLCSGS---II 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 338 HS-------RTMllaRGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGELFITvatfSWSN-MTIILTGLNMLITA 404
Cdd:MTH00208 374 HSlnneqdlRKM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGLA----SISNlLSIILALIATLLTA 446
|
....
gi 311088107 405 TYSL 408
Cdd:MTH00208 447 VYSF 450
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
6.45e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 51.88 E-value: 6.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 59 DPLSSPLLILTMWLFPLTIMASQYHLTKEPsqRKKHFLFTLiSLQLFLIMTF-TATELIMFYILFESTLIPTLIIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP--HVPRFLCYL-SLFTFLMMVLvTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 138 NQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNLFMV---TYWSQEMANSWSNSLMWMACIMAFMI--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 206 --KMPLYGLHLWLPKAHVEAPIAGSMILAAILLKLGGYGMMRITmilnPLTKFMAYPFLMVCLWGMV---MTSLICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 281 DLKSLIAYSSVSHMALVIVAILIQTpwSFMGATALMVAHGLTSSMLFCLANSnyeRIHSRT-----MLLARGLQSLLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 311088107 356 STWWLLASLTNLALPPSINLIGELFITVATFSWSNMTI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-398 |
6.81e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.39 E-value: 6.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 137 GNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLNlfmvtywsqeMA---------NSWSNSLMWMACIM---AFM 204
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLN----------MAdlaqriaqlPAADRALLEAGAALllvVFL 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 205 IKMPLYGLHLWLPKAHVEA--PIAGsmiLAAILLKLGGYGMMRI-TMILNPLTKFMAYPFLMVCLWGMVMTSLI----CL 277
Cdd:PRK12666 222 IKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVL 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLFCLAnsnyERIHSRTMLLARGLQSLLPLMST 357
Cdd:PRK12666 299 AAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA----DLVERQRGAAADRLAVTPELYDL 374
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 311088107 358 WWLLASLTNLALPPSINLIGELFITVAtfswsnmtIILTGL 398
Cdd:PRK12666 375 DEEEEEEVGVAIPATMALLGLLFFICA--------LALAGL 407
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-323 |
1.16e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.59 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 1 MLKIIIPTIMLLPVTWYSTNPMVWINITLHSLTISLTSLSFLNQTDGNSNNFSSTFFSDPLSSPLLILTMWLFPLTIMAS 80
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 81 QYHLTkepsQRKKHFLFTLISLQLFLIMTF-TATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLVGSL 158
Cdd:PRK05777 94 RPYLE----DRGRGEFYLLVLFALLGMMVMvSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIkYFVLGALASGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 159 pLLVALSFIQNYMGTLNLFMVtywSQEMANSWSNSLMWMACImAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMILAA 233
Cdd:PRK05777 170 -LLYGMSLLYGATGSLSFAGI---AKALADGSGNSLLLLFGL-VFLLvglafKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 234 ILlKLGGYGM-MRI-TMILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMG 311
Cdd:PRK05777 245 AP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSA 323
|
330
....*....|..
gi 311088107 312 ATALMVAHGLTS 323
Cdd:PRK05777 324 VLFYLLAYLFMT 335
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-371 |
3.32e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.44 E-value: 3.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 93 KHFLFTLISLQLFLIMTFTATELIMFyILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMG 172
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 173 TLNLFMVTYWSQEMANSWSNSLMWMACIMAFM---IKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRITM 248
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 249 ILNPLTKFmaypFLMVCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTP----WSFMGATALMVAHGL 321
Cdd:PRK12649 270 IFSGTEAW----FILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 311088107 322 TSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-371 |
1.46e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 47.60 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 155 VGSLPLLVALSFIQNYMGTLNLFMVTYWSQEMA-NSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMILAA 233
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWAATANlDPLTATLLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNS 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 234 ILLKLGGYGMMRITMI--LNPLTKFmaypfLMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPwsf 309
Cdd:PRK07390 261 VVVATGAWVLIKLQPVlaLSPVALT-----VLIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP--- 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088107 310 MGATALMVAHGLTSSMLFCLANSNYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07390 333 DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
96-414 |
5.65e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.37 E-value: 5.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 96 LFTLislqlFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALSFIQNYMGTLN 175
Cdd:MTH00020 119 LFTF-----LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 176 lFMVTYWSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGS-MILAAILLKLGGYGMMRITmilnPLT 254
Cdd:MTH00020 194 -FSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSS----PLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 255 KFMAYPFLMVCLWGMV---MTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMVAHGLTSSMLFCLAN 331
Cdd:MTH00020 268 EQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKALLFLSAG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 332 SnyeRIHS----RTMLLARGLQSLLPLMSTWWLLASLTNLALP-----PSINLIGEL--FITVATFSWsnmtiILTGLNM 400
Cdd:MTH00020 345 S---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILELafGQYYLIFAY-----WLGCFSA 416
|
330
....*....|....
gi 311088107 401 LITATYSLYMLTMT 414
Cdd:MTH00020 417 LLTAFYSIRLIYLT 430
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
187-371 |
2.25e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 187 ANSWSNSLMWMACIMAF---MIKMPLYGLHLWLPKAhVEAPIAGS-MILAAILLKLGGYGMMRitmiLNPLtkFMAYPFL 262
Cdd:PRK07376 218 SGAVSGWLALLLCILVFlgpMAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGVFLVAR----MYPV--FEQFPAV 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 263 M-VCLWGMVMTSL----ICLRQTDLKSLIAYSSVSHMALVIVAiliqtpwsfMGATAL------MVAHGLTSSMLFCLAN 331
Cdd:PRK07376 291 MtVIAWTGAITAFlgasIALTQNDIKKGLAYSTISQLGYMVMA---------MGCGAYsaglfhLMTHAYFKAMLFLGSG 361
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 311088107 332 S---------NYERIHSRTMLLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07376 362 SvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPP 410
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
2.28e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 40.01 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLVGSLPLL-VALSFIQNYMGTLNLFMVTYWSQEMANS 189
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 190 WSNSLMWMACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMILAaILLKLGgygMMRITMILNPLTKFmaypFLMVCLWGM 269
Cdd:MTH00196 92 VSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG---IFSILVSIGLNVNI----LLIGGLFSL 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 311088107 270 VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMVAHGLTSSMLF 327
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
201-364 |
3.23e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 201 MAFMIKMPLYGLHL--WLPKAHVEAPIAGSMILAAILLKLGGYGMMRITMILNPL-TKFMAYPFLMVCLWGMVMTSLICL 277
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIpIGYFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 278 RQTDLKSLIAYSSVSHMALVIVAI--------LIQTPWSFMGATALM--VAHGLTSSMLFC------------LANSNYE 335
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFAHSVAKTGLFLssglqekqsitySKKIRNR 325
|
170 180 190
....*....|....*....|....*....|..
gi 311088107 336 RIHSRTMLLARGLQSLLPL---MSTWWLLASL 364
Cdd:PRK06459 326 WIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-327 |
5.01e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.16 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 80 SQYHLTKEPSQRKkhFLFTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
Cdd:MTH00211 99 SLWYMSSEPNINR--FFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 160 LLVALSFIQNYMGTLNLfmvtywSQEMANSWSNSLMWMACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMIL-AAILLKL 238
Cdd:MTH00211 177 LLLSMVWLLLNLNSWEI------SQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSALLhSSTMVVA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088107 239 GGYGMMRitmiLNPLTKFMAYPFLMVCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAI-LIQTPWSFMgata 314
Cdd:MTH00211 250 GVFLLIR----LSPLFQNNQLILGAVLLLGaltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLgLNQPQLAFL---- 321
|
250
....*....|...
gi 311088107 315 LMVAHGLTSSMLF 327
Cdd:MTH00211 322 HICTHAFFKAMLF 334
|
|
| |
