|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 1072.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 1 MNLFSSFTLITLMILMYPIMTNLMNIHKNVPYTLHVKLITTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISL 80
Cdd:MTH00108 1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 81 KADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYG 160
Cdd:MTH00108 81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 161 RADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHNPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 241 TPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGIN 320
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMN 400
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 401 MSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPQM 480
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 481 TMPTYLKTMALAVTILGLTLAMELSLTTNNLKLKSPSQVLKFSNMLGFFPNIIHRLTPLYKLTTSQNTASLLLDLIWLEK 560
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570 580
....*....|....*....|....*...
gi 311088066 561 SMPKNMSQLQLSFSKTVSNQKGLIKLYF 588
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYF 588
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
3-587 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 905.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 3 LFSSFTLITLMILMYPIMTNLMNIHKNVPYTL-HVKLITTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISLK 81
Cdd:MTH00137 6 IMTSSLILIFALLIYPLLTTLSPNPQKPNWALtHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 82 ADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGR 161
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 162 ADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHNPNL-VPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00137 166 ADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFDLtLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 241 TPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGIN 320
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMN 400
Cdd:MTH00137 326 QPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALN 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 401 MSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPQM 480
Cdd:MTH00137 406 TSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVM 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 481 TMPTYLKTMALAVTILGLTLAMEL-SLTTNNLKLKSPSQVLKFSNMLGFFPNIIHRLTPLYKLTTSQNTASLLLDLIWLE 559
Cdd:MTH00137 486 TMPPLLKLAALIVTILGLLIALELaSLTNKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLE 565
|
570 580
....*....|....*....|....*....
gi 311088066 560 KSMPKNMSQLQLSFSKTVSN-QKGLIKLY 587
Cdd:MTH00137 566 KTGPKGIASLQLPLITTTSNiQQGMIKTY 594
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
3-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 851.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 3 LFSSFTLITLMILMYPIMTNLMNiHKNVPYTLHVKLITTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISLKA 82
Cdd:MTH00004 4 LLNTTTLLTLLILLTPILLPLLS-KNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 83 DYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRA 162
Cdd:MTH00004 83 DQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 163 DANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMlNHNPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTP 242
Cdd:MTH00004 163 EANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFS-PTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 243 VSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQP 322
Cdd:MTH00004 242 VSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 323 HLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMS 402
Cdd:MTH00004 322 QLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 403 HANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPQMTM 482
Cdd:MTH00004 402 YLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTM 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 483 PTYLKTMALAVTILGLTLAMELSLTTNNLKLKSPSQVLKFSNMLGFFPNIIHRLTPLYKLTTSQNTASLLLDLIWLEKSM 562
Cdd:MTH00004 482 PTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMG 561
|
570 580
....*....|....*....|....*..
gi 311088066 563 PKNMSQLQLSFSKTVSN-QKGLIKLYF 588
Cdd:MTH00004 562 PKGLANLQLTASKTLTTlQKGLIKNYL 588
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-587 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 816.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 1 MNL---FSSFTLITLMILMYPIMTNLMNihknvPYTLHVKLITTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLT 77
Cdd:MTH00066 1 MNLmliFNSSMILSLLLLILPLLLPKSN-----NFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNIN 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 78 ISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISW 157
Cdd:MTH00066 76 SSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGW 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 158 WYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNhNPNLVPLMGLLLAATGKSAQFGLHPWLPSAM 237
Cdd:MTH00066 156 WHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLN-DNSTLPLLGLILAAAGKSAQFGLHPWLPAAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 238 EGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTL 317
Cdd:MTH00066 235 EGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 318 GINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIE 397
Cdd:MTH00066 315 GLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIE 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 398 TMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTT 477
Cdd:MTH00066 395 AMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKP 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 478 PQMTMPTYLKTMALAVTILGLTLAMELSLTTNNLKLKSPSqvLKFSNMLGFFPNIIHRLTPLYKLTTSQNTASLLLDLIW 557
Cdd:MTH00066 475 QILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKM--HSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTW 552
|
570 580 590
....*....|....*....|....*....|.
gi 311088066 558 LEKSMPKNMSQLQLSFSKTVSN-QKGLIKLY 587
Cdd:MTH00066 553 YEKSGPKGLTNQQLPPIKTITNiQTGLIKTY 583
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 669.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 1 MNLFSSFTLITLMILMYPIMTNLMNihknvpYTLHVKLITTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISL 80
Cdd:MTH00211 2 NTIFNSGFLLILILLLLPLLLPLNN------SKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 81 KADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYG 160
Cdd:MTH00211 76 KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 161 RADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHNPNLvPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00211 156 RSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLTL-FLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 241 TPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGIN 320
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 321 QPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMN 400
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 401 MSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPQM 480
Cdd:MTH00211 395 GSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIL 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 481 TMPTYLKTMALAVTILGLTLAMELSlttNNLKLKSPSQVLKFSNMLGFFPNIIHRLTPLYKLTTSQNTASLLLDLIWLEK 560
Cdd:MTH00211 475 SLPFLLKLMPLLVTIVGLLLGLELV---NLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEK 551
|
570 580
....*....|....*....|....*....
gi 311088066 561 SMPKNMSQLQLSFSKTVSN-QKGLIKLYF 588
Cdd:MTH00211 552 LGPKGLGVNQKKLIKLVTSpQQGLIKSYL 580
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
3-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 545.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 3 LFSSFTLITLMILMYPIMTNLMNIHKNVPYTLHVKLITTYAFLtSLIPATLF-TFSQQETIVSNWHWMTIQTLKLTISLK 81
Cdd:MTH00208 26 FSSNLPNISTSNASLGGNNNNNSIINYNNSNFSISLLKTLAFL-SLINLLIWiLLGCPNINISLSNWLSNTLFNFSLSFI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 82 ADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGR 161
Cdd:MTH00208 105 FDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTR 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 162 ADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLN-HNPNLVPLM--GLLLAATGKSAQFGLHPWLPSAME 238
Cdd:MTH00208 185 NDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNnSNSFLINILlfGILLAAAGKSAQFGLHPWLPAAME 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 239 GPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLG 318
Cdd:MTH00208 265 GPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIG 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 319 INQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIET 398
Cdd:MTH00208 345 LNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEA 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 399 MNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPmtTP 478
Cdd:MTH00208 425 GLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFN--LP 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 479 QMTMPTYLKTMALAVTILGLTLAMELsLTTNNLKLKSPSQVLKFSNMLgFFPNIIHRLTPLYKLTTSQNTASLLLDLIWL 558
Cdd:MTH00208 503 PLTLPLILKSLPLIVTIIGAAFSFSF-LLSLSSNPINSNFFSFLSNQW-FFVNISHSIIISFSFFTSLFGSTRTLDRGWS 580
|
570 580 590
....*....|....*....|....*....|.
gi 311088066 559 EKSMPKNMSQLQLSFSKTVSN-QKGLIKLYF 588
Cdd:MTH00208 581 ENIGPQGIGNTSSTLSKSYQLtQTGYIKQYL 611
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
43-501 |
1.31e-138 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 416.48 E-value: 1.31e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 43 AFLTSLIpaTLFTFSQQETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLL 122
Cdd:COG1009 41 AFVLSLL--LFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMF 202
Cdd:COG1009 119 LFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 203 ---MLNHNPNLVPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLM 277
Cdd:COG1009 199 aaaPTILSSPLLTLILLLLllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 278 LCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLnNEQDIR 357
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 358 KMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATS-LTAVYSTRIIFYVLMKQPR 436
Cdd:COG1009 358 KMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPR 437
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088066 437 FTASSMTSENNPLLINSIKRLAIGSIFAGF--------LLSSNILPMTTPQMTMPTYLKTMALAVTILGLTLA 501
Cdd:COG1009 438 PKTPKHPHESPWLMTLPLVVLAVLSLVLGLllpgllegLLAPAAVLGGELHLAHGLLLNALPLLLSLLGIALG 510
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
43-501 |
4.58e-131 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 397.61 E-value: 4.58e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 43 AFLTSLIPATLFTFSQQETI-VSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYL 121
Cdd:PRK06590 42 SALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM 201
Cdd:PRK06590 122 NLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 202 F-----MLNHNPNLVPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQ 274
Cdd:PRK06590 202 FaaapqFFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEAL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 275 TLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQ 354
Cdd:PRK06590 282 LFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 355 DIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMnMSHANAWALTVTLIATSLTAVYSTRIIFYVL--- 431
Cdd:PRK06590 362 DIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFhgk 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 432 ----MKQPRFTASSMTsenNPLLInsikrLAIGSIFAGFLLS---SNILPMTT------PQMTMPTYLKTMALAVTILGL 498
Cdd:PRK06590 441 ekekIHHPHESPAVMT---LPLIV-----LAVLSVFAGALIVppfLGVLPLTTelahgeAEHHLPVWVALLPLVVALAGI 512
|
...
gi 311088066 499 TLA 501
Cdd:PRK06590 513 ALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
43-526 |
3.13e-122 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 374.31 E-value: 3.13e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 43 AFLTSLIPATLFTFSQQETI-VSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYL 121
Cdd:TIGR01974 41 AALSAFVFVDFFLNGEGEAFtQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM 201
Cdd:TIGR01974 121 NLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEV 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 202 FML--NHNPNLVPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLM 277
Cdd:TIGR01974 201 FALapGAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLV 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 278 LCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIR 357
Cdd:TIGR01974 281 TIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIR 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 358 KMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRF 437
Cdd:TIGR01974 361 KMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERH 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 438 TASSMTSENNPLLINSIKRLAIGSIFAGFLLS------SNILPMTTPQMT----MPTYLKTMALAVTILGLTLAMELSLT 507
Cdd:TIGR01974 441 EADAHPHESPLVMLLPLIVLAVGSVFAGFFIVplfeflKGVLPTSAEPALehhhVPALEIWSPTAVAILGILLAYLLYLG 520
|
490
....*....|....*....
gi 311088066 508 TNNLKLKSPSQVLKFSNML 526
Cdd:TIGR01974 521 NPTLPAKIAQRHSGLYRLL 539
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
36-504 |
2.83e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 348.61 E-value: 2.83e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 36 VKLITTYAFLTSLIPATLF----TFSQQETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSD 111
Cdd:MTH00020 28 AGILTSSCLIISLSWSFLIfyeiLFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGD 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 112 PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLV 191
Cdd:MTH00020 108 PHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 192 HSNTWELQQMF-MLNHNPN---LVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMT 267
Cdd:MTH00020 188 RFGSLDFSSVFnMVVSAPSsdiTLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLF 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 268 ETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSII 347
Cdd:MTH00020 268 EQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVI 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 348 HNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRII 427
Cdd:MTH00020 348 HALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLI 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 428 FYVLMKQPRFTASSMTS--ENNPLLINSIKRLAIGSIFAGFLLSSNI--LPMTTPQMtMPTYLKTMALAVTILGLTLAME 503
Cdd:MTH00020 428 YLTFLSNTNLKKAVFFHlhEGDWNLLLPLGILALGSIFVGYLAKEMIwsFQITLPPI-VPLSIKLLPVFLSLGGIGLVII 506
|
.
gi 311088066 504 L 504
Cdd:MTH00020 507 L 507
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
66-501 |
9.60e-108 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 336.98 E-value: 9.60e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 66 WHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWE 145
Cdd:MTH00210 62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 146 GVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFML---NHNPNLVPLMGLLL--AA 220
Cdd:MTH00210 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLlvtNINKESLTIICLLLfiGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 221 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKK 300
Cdd:MTH00210 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 301 IVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLAL 380
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 381 TGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPR-----FTASSMTSEN--NPLLIns 453
Cdd:MTH00210 382 MGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNskkevFIGVHESSWNitFPLLL-- 459
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 311088066 454 ikrLAIGSIFAGFL-----LSSNILPMttpqmtMPTYLKTMALAVTILGLTLA 501
Cdd:MTH00210 460 ---LAFGSIFVGYLgkevvLSNVIPPI------VPNSIKMIPLLFSLLGALLA 503
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
42-575 |
6.05e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 333.35 E-value: 6.05e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 42 YAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYL 121
Cdd:MTH00151 12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWwYGRADANTAALQAIVYNRIGDIGFILSMAWFLV--HSNTWelq 199
Cdd:MTH00151 92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIY-YQNKKSLSAGMLTALTNRIGDVLILLSIALLVLlgHWSIL--- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 200 qmFMLNHNPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLC 279
Cdd:MTH00151 168 --SMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 280 LGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKM 359
Cdd:MTH00151 246 ISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 360 GGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTA 439
Cdd:MTH00151 326 GSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 440 SSMTSENNPLLINSIKRLAIGSIFAGFLLSSnILPMTTPQMTMPTYLKTMALAVTILGLTLAMELSLTTNNLKLKSPSQV 519
Cdd:MTH00151 406 LSSKSDEDFYVSLPMLLLSLGALIGGKLLQS-LFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLSF 484
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 311088066 520 LkFSNMLGFFPNIIHRLTPLYKLTTSQNTASllLDLIWLEKSMPKNMSQLQLSFSK 575
Cdd:MTH00151 485 F-FSSMWFLSPLSSQPLKSLSLKLSNSSMKS--LDMGWLEILGGQGVFKANKSFSV 537
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
53-588 |
1.07e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 327.48 E-value: 1.07e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 53 LFTFSQQETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILV 132
Cdd:MTH00165 23 LYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLI 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 133 TANNLFQLFIGWEGVGIMSFLLIsWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHsNTWELQQM--FMLNHNPNL 210
Cdd:MTH00165 103 ISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF-GSWNFIFYldFMKNSFEML 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 211 VPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLcLGSITTLFTAM 290
Cdd:MTH00165 181 LIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFLLL-ISLLTMFMAGL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 291 CALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTA 370
Cdd:MTH00165 260 GANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 371 SSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLL 450
Cdd:MTH00165 340 SCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFM 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 451 INSIKRLAIGSIFAGFLLSSNILPMtTPQMTMPTYLKTMALAVTILGLTLAMELSLTTNNLKLKSpSQVLKFSNMLG--- 527
Cdd:MTH00165 420 LKSMILLLFMSIFGGSMLSWLIFPE-PYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKS-LKNYKLSSFLGsmw 497
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088066 528 FFPNIIHRLTPLYKLTTSQNTaSLLLDLIWLEKSMPKNMSQLQLSFSKTVSN-QKGLIKLYF 588
Cdd:MTH00165 498 FMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYL 558
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
44-575 |
5.83e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 296.94 E-value: 5.83e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 44 FLTSLIPATLFTFSQqETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLL 123
Cdd:MTH00209 13 FLFSFLMFVIFMWFQ-KIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLISWwYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNtWelqQMFM 203
Cdd:MTH00209 92 FILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-W---NIFY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 204 LNHNPNL--VPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLG 281
Cdd:MTH00209 167 LNFNSNLgsVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 282 SITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGG 361
Cdd:MTH00209 247 SLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGN 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 362 LLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASS 441
Cdd:MTH00209 327 LWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLN 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 442 MTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPqMTMPTYLKTMALAVTILGLTLaMELSLTTNNLKLKSPSQVLK 521
Cdd:MTH00209 407 SSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNS-VVLPWFLKLLPIMLILFGVLL-MYMVLKKNFFLIKGYKVNYF 484
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 311088066 522 FSNMLgFFPNIIHRLTPLYKLTTSQNTASlLLDLIWLEKSMPKNMSQLQLSFSK 575
Cdd:MTH00209 485 LSQMW-FLPDLSSQPVNKFTMKLSKTMLK-LLDQGWVEKMSGQGSFKVLKKSSK 536
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
39-569 |
6.76e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 294.37 E-value: 6.76e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 39 ITTYAFLTSLIPATLFTFSQQETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFF 118
Cdd:MTH00207 12 YLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 119 KYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWwYGRADANTAALQAIVYNRIGDIGFILSMAWFLvHSNTWEL 198
Cdd:MTH00207 92 SLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIY-YQNPKSLGAGMITALTNRIGDVMLLLSIGWTL-NQGHWSI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 199 QQMFMLNHNPNLVplMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLML 278
Cdd:MTH00207 170 TNMWQTDMNNYIA--LSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 279 CLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRK 358
Cdd:MTH00207 248 LTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRT 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 359 MGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFT 438
Cdd:MTH00207 328 MGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 439 ASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPMTTPqMTMPTYLKTMALAVTILGLTLAME-LSLTTNNLKLKSPS 517
Cdd:MTH00207 408 PYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEE-PILPLQYKLLPLLVVTLGALLAWLfTTPNITKTPLLINN 486
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 311088066 518 QVLKFSNMLGFFPNIIHRLTPLYKLTTSQNTASLLLDLIWLEKSMPKNMSQL 569
Cdd:MTH00207 487 PLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKM 538
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
66-587 |
1.25e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 296.48 E-value: 1.25e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 66 WHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWE 145
Cdd:MTH00032 62 YKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 146 GVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAwfLVHSNTWELQQMFM--------------LNHNPNLV 211
Cdd:MTH00032 142 GVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMV--LIYKTIGSLDFLTFnggsvgsgimdrgyYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 212 PL-------MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSIT 284
Cdd:MTH00032 220 PLapfaiigILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 285 TLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH-LAFLHICNHAFFKAMLFMCSGSIIHNLN-NEQDIRKMGGL 362
Cdd:MTH00032 300 AFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGL 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 363 LKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIE------------------------------------TMNMSHANA 406
Cdd:MTH00032 380 IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSA 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 407 WALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSEN----NPLLINSIKRLAIGSIFAGFLLsSNILPMTTPQMTM 482
Cdd:MTH00032 460 FAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHinivDKRVLTVLSLLCFGAIFVGYLI-QDILIGDIEHPIV 538
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 483 PTYLKTMALAVTILGLTLAMELSLTTNNLKLK------SPSQVLKFSNMLGF---FPNIIHRLTPLYKLTTSQNTASLLL 553
Cdd:MTH00032 539 PPLIKVMPTLMGLFGMGLCLWAQKGTREGELYwgfdpiGPSFLLSIYSFLGGawqGDHLINKLVAIPLFSFGHWGIYKTL 618
|
570 580 590
....*....|....*....|....*....|....*
gi 311088066 554 DLIWLEKSMPKNMSQLQLSFSKTVSN-QKGLIKLY 587
Cdd:MTH00032 619 DRGWLELFGPQGISTIALRVSQFISNlQSGVISRY 653
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
87-428 |
8.83e-81 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 267.66 E-value: 8.83e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 87 VLFIPVALLVtwsiMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANT 166
Cdd:PRK07376 98 VLVTTVALLV----MIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAAD 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 167 AALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMF-----MLNHN---PNLVPLMGLL--LAATGKSAQFGLHPWLPSA 236
Cdd:PRK07376 174 AAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIAdrlseLVSSGavsGWLALLLCILvfLGPMAKSAQFPLHVWLPDA 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 237 MEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVT 316
Cdd:PRK07376 254 MEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMA 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 317 LGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNN--------EQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTG 388
Cdd:PRK07376 334 MGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAG 413
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 311088066 389 FYSKDLIIETMNMSHANAWAltVTLIATSLTAVYSTRIIF 428
Cdd:PRK07376 414 FWSKDEILGAAFEANPALWF--VGFLTAGMTAFYMFRMYF 451
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
128-428 |
8.13e-63 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 220.53 E-value: 8.13e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGF---ILSMAWFlvhSNTWELQQMFM- 203
Cdd:CHL00025 135 MLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgILGFYWI---TGSFEFRDLFEi 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 204 -----LNHNPNLVP--LMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQ 274
Cdd:CHL00025 212 fnnliYNNEVNLLFatLCAFLLflGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIM 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 275 TLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNL---- 350
Cdd:CHL00025 292 NLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepiv 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 351 ----NNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIetmnmshANAW--ALTVTLIATS---LTAV 421
Cdd:CHL00025 372 gyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-------NDSWlySPIFAIIAWStagLTAF 444
|
....*..
gi 311088066 422 YSTRIIF 428
Cdd:CHL00025 445 YMFRIYL 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-415 |
4.39e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 210.55 E-value: 4.39e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 42 YAFLTSLIPATLF-TFSQQ-------ETIVSNWHWmtIQTLKLTISLKADYFSVLFipvALLVT---WSIMEFSTWYMQS 110
Cdd:PRK12647 16 AGWLLALLPLALFlYFLSFipeiaagETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 111 DPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDI----GFILsm 186
Cdd:PRK12647 91 HPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLallaGLIL-- 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 187 AWFLvhSNTWELQQMF----MLNHNPNLVPLMGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLI 261
Cdd:PRK12647 169 LGNV--TGTYSLSELLasgdVIREHPLYLAILLLVLGgAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 262 RFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAM 338
Cdd:PRK12647 247 RLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGA 326
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088066 339 LFMCSGSIIHNLNNeQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETmnMSHANAWALTVTLIA 415
Cdd:PRK12647 327 LFMVAGIIDHETGT-RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
78-430 |
1.37e-57 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 199.60 E-value: 1.37e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 78 ISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISw 157
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 158 WYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM-FMLNHNPNLVPLMGLLLAATG---KSAQFGLHPWL 233
Cdd:COG0651 149 LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 234 PSAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPM---TETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQ 309
Cdd:COG0651 229 PDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLlfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 310 LGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHNLnNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFL 386
Cdd:COG0651 308 IGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 311088066 387 TGFYSKDLIIETMnMSHANAWALTVTLIATSLTAVYSTRIIFYV 430
Cdd:COG0651 387 SGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
65-436 |
1.57e-56 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 205.66 E-value: 1.57e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 65 NWHWMTIQTL-----KLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQ 139
Cdd:PRK12650 55 TWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 140 LFIGWEGVGIMSFLLI--SWWYGRAdantAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMF---MLNHNPNLVPLM 214
Cdd:PRK12650 135 LFVAWELVSLASFFLIarSGSGGEA----GSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILhsdVWAEKPGLTTVV 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 215 GLLLA--ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCA 292
Cdd:PRK12650 211 AVLIAvaAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 293 LTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLLKTMPFT 369
Cdd:PRK12650 291 VQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFT 369
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088066 370 ASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAV----YSTRIIFYVLMKQPR 436
Cdd:PRK12650 370 FVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-430 |
1.81e-54 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 199.65 E-value: 1.81e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 43 AFLTSLIPATLftfsQQETIVSNWHWMtiQTLKLTISLKADYFSVLFipvALLVT---WSIMEFSTWYMQSDPNINLFFK 119
Cdd:PRK12648 41 VLLALLYPAVA----AGEVIRAEIEWL--PALGLNLSLRLDGLAWLF---ALLILgigLLVVLYARYYLSPADPVPRFFS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 120 YLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGdiGFILsMAWFLVHSN---TW 196
Cdd:PRK12648 112 FLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSY 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 197 ELQQMF----MLNHNPNLVPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHP-MTETN 270
Cdd:PRK12648 189 DLDVVLaagdLIRAHPLYPPALVLiLLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPvLAGTE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 271 NTAQTLMLClGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPhLAFL----HICNHAFFKAMLFMCSGSI 346
Cdd:PRK12648 269 EWFWIVGGA-GLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP-LAAVaaifHIINHATFKASLFMAAGII 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 347 IHnlnnE---QDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLII-ETM--NMSHANAWAL-TVTLIATSLT 419
Cdd:PRK12648 347 DH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLdtHLLGSLDWLLpVAATLAGAFS 422
|
410
....*....|.
gi 311088066 420 AVYSTRIIFYV 430
Cdd:PRK12648 423 VAYSLRFIHDV 433
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-414 |
1.90e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 186.75 E-value: 1.90e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 134 ANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM-----FMLNHNP 208
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 209 NLVPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHP-MTETNNTAQTLMLCLGSITTL 286
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLlYLPSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 287 FTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLL 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 311088066 364 KTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIE-TMNMSHANAWALTVTLI 414
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAaAVAASWIFLVLAGVVGS 291
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
39-436 |
1.97e-53 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 195.06 E-value: 1.97e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 39 ITTYAFLTSLIPATLFTFSQQETIvsNWhwmtIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFF 118
Cdd:TIGR00940 36 LVCFLYTLGLYPYTASGGVLHYTI--DW----VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 119 KYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWEL 198
Cdd:TIGR00940 110 AYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 199 QQMF-----MLNHNPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTA 273
Cdd:TIGR00940 190 DAVIasadaIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAW 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 274 QTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL----------------AFLHICNHAFFKA 337
Cdd:TIGR00940 270 FWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKG 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 338 MLFMCSGSIIHNlNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTL---- 413
Cdd:TIGR00940 350 SLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPFDTVTLgylf 428
|
410 420
....*....|....*....|....*...
gi 311088066 414 -----IATSLTAVYSTRIIFYVLMKQPR 436
Cdd:TIGR00940 429 pyvatVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-467 |
3.69e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 192.83 E-value: 3.69e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 66 WHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSD-PNINLFFKYLLLFLITMLILVTANNLFQLFIGW 144
Cdd:PRK12644 56 EVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 145 EGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMfmLNHNPN----LVPLMGLLLAA 220
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL--LADPPTgpavSVAVVLILVGA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 221 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKK 300
Cdd:PRK12644 214 LSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 301 IVAFSTSSQLGLMMVTLGINQPH--LAFLH-ICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLLKTMPFTASSLIIGS 377
Cdd:PRK12644 294 ILAYGTVSQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAA 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 378 LALTGMPFLTGFYSKDLIIETM----NMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENN---PLL 450
Cdd:PRK12644 373 ASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLWGAFARKPGAFPSVAVTEMHrpsPLF 452
|
410
....*....|....*..
gi 311088066 451 INSIKRLAIGSIFAGFL 467
Cdd:PRK12644 453 LAPPAVLAVLGLVLGLL 469
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
84-475 |
2.48e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 184.74 E-value: 2.48e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 84 YFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIsWWYGRAD 163
Cdd:MTH00095 45 FNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV-LFYNNWD 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 164 ANTAALQAIVYNRIGDIgFILSMAWFLVHSNTWELQQMFMLNhnpnLVPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPV 243
Cdd:MTH00095 124 SNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSS----SMILM-LLLTSFTKSAQFPFSSWLPKAMSAPTPV 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 244 SALLHSSTMVVAGIFLLIRFHPMTEtNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH 323
Cdd:MTH00095 198 SSLVHSSTLVTAGLILLMNFSYLIL-NMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSF 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 324 LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSH 403
Cdd:MTH00095 277 VSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNN 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088066 404 ANAWALTVTLIATSLTAVYSTRIIFYVLMKqprFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPM 475
Cdd:MTH00095 357 YMIFFSLMFFFSVFLTFGYSYRLWKSFFLS---FSKVVNVYSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNL 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
8-427 |
1.69e-50 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 186.88 E-value: 1.69e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 8 TLITLMILMYPIMTNLMNIHKNVPYTLHVKLIttyAFLTSLIPATLFTFSQQETIVSNW-----HWMTIqtLKLTISLKA 82
Cdd:PRK12646 2 SLVYLLIAILVIMAMILLTSKRRALAKYAGYI---ALVAPIISSIYFLIQIPSVAKLQYlstsiPWMKT--LDINLDLRL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 83 DYFSVLFIPVALLVTWSIMEFSTWYMQSD-PNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGR 161
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 162 ADANTAALQAIVYNRIGD----IGFIlsMAWFLVHSNTWE--LQQMFMLNHNPNLVPLM-GLLLAATGKSAQFGLHPWLP 234
Cdd:PRK12646 157 GDSQFGAIQSFMITVFGGlallVGFI--MLYIMTGTNNITeiLGQADHIKNHGLFIPMIfMFLLGAFTKSAQFPFHIWLP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 235 SAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMM 314
Cdd:PRK12646 235 RAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIM 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 315 VTLGIN-----QPHLAF------------LHICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLLKTMPFTASSLIIGS 377
Cdd:PRK12646 315 AMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAA 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 311088066 378 LALTGMPFLTGFYSKDLIIETM-NMSHANAWALTVT-------LIATSLTAVYSTRII 427
Cdd:PRK12646 394 LSMAGVPFLNGFLSKEMFLDALtQTGQLSQFSLISMiiivfigVIASIFTFTYALYMV 451
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
128-430 |
2.04e-50 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 186.67 E-value: 2.04e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDI----GFILsmawFLVHSNTWELQQMF- 202
Cdd:PRK12645 123 MLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LYIMTGSFSIREMIa 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 203 ---MLNHNPNLVPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLML 278
Cdd:PRK12645 199 nadEIQNSPLFIPAMILiLLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVT 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 279 CLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHL----------------AFLHICNHAFFKAMLFMC 342
Cdd:PRK12645 279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMI 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 343 SGSIIHNLNNeQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETM-NMSHANAWALT--------VTL 413
Cdd:PRK12645 359 VGIVDHETGT-RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlNATEANLFSLDtwgvlfpvIAW 437
|
330
....*....|....*..
gi 311088066 414 IATSLTAVYSTRIIFYV 430
Cdd:PRK12645 438 VASVFTFVYSIIFIFKT 454
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
128-423 |
3.18e-47 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 172.47 E-value: 3.18e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLISWwYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHN 207
Cdd:PRK06525 126 MAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 208 PNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF-HPMTETNNTAQTLMLCLGSITTL 286
Cdd:PRK06525 205 LKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAiQSMGPIPHVIGYVGAVMAIVTLL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 287 FTAMCALTQNDIKKIVAFSTSSQLGLMMVTL--GINQPHLAF----LHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMG 360
Cdd:PRK06525 285 YGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLR 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088066 361 GLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYS 423
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
38-435 |
1.44e-45 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 170.48 E-value: 1.44e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 38 LITTYAFLTSLIpaTLFTFSQQETIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLF 117
Cdd:PRK07390 45 LMTLLAFVHSLL--ALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWE 197
Cdd:PRK07390 123 FALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLN 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 198 LQQMFM----LNHNPNLVPLMGLLLAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFHPMTETNN 271
Cdd:PRK07390 203 FSDLAAwaatANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSP 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 272 TAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNlN 351
Cdd:PRK07390 282 VALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-T 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 352 NEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIEtmNMSHANAWALTVTLIATSLTAVYSTRIIFYVL 431
Cdd:PRK07390 361 ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLAD--GLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF 438
|
....
gi 311088066 432 MKQP 435
Cdd:PRK07390 439 LGKP 442
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-427 |
1.66e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 172.32 E-value: 1.66e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 76 LTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 156 SWWYGRADANTAALQAIVYNRIGdiGFILSMAWFLVHS--NTWELQQMF--------MLNHNPNLVPLMGLLLAATGKSA 225
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGG--GLFMFAGFLLLHVitGTYDIATILqdselienIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFS 305
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 306 TSSQLGLMMVTLGINQPH-------LAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLLKTMPFTASSLIIGSL 378
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAAL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 311088066 379 ALTGMPFLTGFYSKDLIIET---MNMSHANAWALTVTLIATS---LTAVYSTRII 427
Cdd:PRK12649 389 AMAGIPPLNGFLSKEMFYETsveMGALIGGPFTIIIPAVAVLggvFTFAYSIKLI 443
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
422-588 |
2.87e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 150.39 E-value: 2.87e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 422 YSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGSIFAGFLLSSNILPmTTPQMTMPTYLKTMALAVTILGLTLA 501
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 502 MELSLTTNNLKLKSPSQVL-KFSNMLGFFPNIIHRLTPLYKLTTSQNTASlLLDLIWLEKSMPKNMSQLQLSFSKTVSN- 579
Cdd:pfam06455 80 LELSNLSNKQLKKSLNFNLhSFSGSMWFFPNLSHRLIPKLSLKLGQKLAK-QIDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
|
....*....
gi 311088066 580 QKGLIKLYF 588
Cdd:pfam06455 159 QKGLIKIYL 167
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-466 |
1.45e-40 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 154.27 E-value: 1.45e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 76 LTISLKADYFSVLFIPVALLVTWsimeFSTWY-MQSDPNINLFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAI----AALLYaIGYGEHRQTRFYALFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 153 LLISWwYGRADANTAALQAIVYNRIGD------IGFILSMAWFLvhsNTWELQQMfmLNHNPNLVPLMGLLLAATG-KSA 225
Cdd:PRK08375 144 ALVAM-GGDRRALAAARKYLIVGLIGStflligVGLLYGVTGTL---NMADLAGA--LAENPTVVTAFGFVLLALAlKAA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR-----FHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKK 300
Cdd:PRK08375 218 VFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKR 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 301 IVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLLKTMPFTASSLIIGS 377
Cdd:PRK08375 298 VLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVAS 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 378 LALTGMPFLTGFYSKDLIIETMNmsHANAWALTVTLIATSL-TAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKR 456
Cdd:PRK08375 377 LSLIGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLA 454
|
410
....*....|
gi 311088066 457 LAIGSIFAGF 466
Cdd:PRK08375 455 LALLSLLLGI 464
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-436 |
3.64e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 142.03 E-value: 3.64e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 75 KLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK12667 73 PIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 155 ISWWYGRADANTAALQAIVYNRIGD------IGFI------LSMAWFLVHSNTWELQQMFMLNHNPNLVPLMGLLLAA-- 220
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTtlyflaLAFLyatfgtLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALwa 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 221 -TGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF--------HPMTETNNTAQTLMLCLGSITTLFTAM 290
Cdd:PRK12667 233 fTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGAL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 291 CALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLLKTMP 367
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMP 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 311088066 368 FTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWALtVTLIATSLTAVYSTRIIFYVLMKQPR 436
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL-VLLIASAISLVGYFRAWYSLFFGKPK 458
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
37-425 |
1.00e-32 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 131.74 E-value: 1.00e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 37 KLITTYAFLTSLIP--ATLFTFSQQETIVSNWHWMT----IQTLKLTISLKADYFSVLFIPVALLVTWSIMeFSTWYMQs 110
Cdd:COG1008 29 RLARWVALAVSLLTllLSLYLLAGFDPGTGGFQFVEsypwIPSLGISYHLGVDGISLPLVLLTALLTPLAI-LASWNEI- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 111 DPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWyGRADANTAALQAIVYNRIGDIGFILSMAW-- 188
Cdd:COG1008 107 KKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILAly 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 189 FLVHSNTWELQQMFMLNHNPNL-VPLMGLLLAATG-KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFH- 264
Cdd:COG1008 186 FLAGALTFDIAELAAAPLPLTAqLLLFLAFFIAFAvKVPMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFAl 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 265 PMT-ETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLmmVTLGI---NQPHL--AFLHICNHAFFKAM 338
Cdd:COG1008 265 PLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF--VLLGIfalNPLGLqgAVLQMVSHGLITAA 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 339 LFMCSGSIIHNLNNeQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIetMNMSHANAWALTVTLIATSL 418
Cdd:COG1008 343 LFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLIL 419
|
....*..
gi 311088066 419 TAVYSTR 425
Cdd:COG1008 420 TAAYLLW 426
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
86-347 |
2.93e-32 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 130.59 E-value: 2.93e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 86 SVLFIPVALLVT---WSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRA 162
Cdd:PRK08168 68 SGLGLVMAALVQllgWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 163 DANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQ-MFMLNHNPNLVPL----MGLLLAATGKSAQFGLHPWLPSAM 237
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSAlWAHLAAQGASPSLqaaaLLLVLAVILKTAQLPVHGWLIQVM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 238 EGPTPVSALLHSSTMVVAGiFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTL 317
Cdd:PRK08168 228 EAPTPVSALLHAGVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLEC 306
|
250 260 270
....*....|....*....|....*....|
gi 311088066 318 GINQPHLAFLHICNHAFFKAMLFMCSGSII 347
Cdd:PRK08168 307 GLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
128-412 |
8.87e-31 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 127.70 E-value: 8.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHN 207
Cdd:PRK06521 126 MVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLS 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 208 PNLVPLmGLLLAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FHPMTETNNTAQTLMLCLG 281
Cdd:PRK06521 206 PFWASL-VFLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWWGVLVLALG 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 282 SITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGI-------NQPHLAFL-------HICNHAFFKAMLFMCSGSII 347
Cdd:PRK06521 284 AISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLLFLGAGAVL 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 311088066 348 HNLNnEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIET-MNMSHANAWALTVT 412
Cdd:PRK06521 364 HATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSlLSSPGLPQWGLKLA 428
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
132-396 |
1.34e-29 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 123.47 E-value: 1.34e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 132 VTANNLFQLFIGWEGVGIMSFLLIsWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHNPNLV 211
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 212 PLMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTEtnntaqtLMLCLGSITTLFTAMC 291
Cdd:PRK12668 189 ILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 292 ALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMCSGSIIHNLNnEQDIRKMGGLLKT 365
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAgigigtALAING---AVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRS 333
|
250 260 270
....*....|....*....|....*....|.
gi 311088066 366 MPFTASSLIIGSLALTGMPFLTGFYSKDLII 396
Cdd:PRK12668 334 MPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-435 |
8.68e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 120.59 E-value: 8.68e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 78 ISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISW 157
Cdd:PRK08376 84 IIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 158 WYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM-FMLNHNPNLVPLMGLLLAATG---KSAQFGLHPWL 233
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFIAGlamKSGAVPVHMWL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 234 PSAM-EGPTPVSALLHSSTmvVAGIFLLIR--FHPMTETNNTAQT--LMLCLGSITTLFTAMCALTQNDIKKIVAFSTSS 308
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIK--QAGLYALARvlFSIYGPAINLATVgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 309 QLGLMMVTLGINQPHL---------------AFLHICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLLKTMPFTASSL 373
Cdd:PRK08376 322 QIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAF 400
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 311088066 374 IIGSLALTGMPFLTGFYSKDLIIETMNMSHAnawALTV-TLIATSLTAVYSTRIIFYVLMKQP 435
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSALFNP---ILGViAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
76-398 |
9.56e-29 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 121.38 E-value: 9.56e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 76 LTISLKADYFSVLFIPVALLVTWSIMEFSTWY---MQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSF 152
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 153 LLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWElqqmFMLNHNPNLV---PLMGLLLAATGKSAQFGL 229
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFE----LSPLGASAGIlslVFLLLFLGFGIKAGIIPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 230 HPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFHPMTETNNTA-QTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTS 307
Cdd:PRK08667 225 HKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 308 SQLGLMMVTLGI-------NQPHLAFL-------HICNHAFFKAMLFMCSGSIIHNLNNeQDIRKMGGLLKTMPFTASSL 373
Cdd:PRK08667 304 ENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....*
gi 311088066 374 IIGSLALTGMPFLTGFYSKDLIIET 398
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYES 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
83-414 |
2.58e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 112.72 E-value: 2.58e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 83 DYFSVLFIPVALLVTWSIMEFSTWYMQ--------SDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRhevehgelSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 155 ISWwYGRADANTAALQAIVynrIGDIGfiLSMAWF---LVHSN-----TWELQQMF---MLNHNPNLVP-LMGL-----L 217
Cdd:PRK06458 148 VGI-YRTRASLEAAWKYII---ICSVG--VAFALFgtiLVYANaatvmGDGEMAILwteLLKHASLLDPtLMKLafvflL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 218 LAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFHPMTET---NNTAQTLMLCLGSITTLFTAMCAL 293
Cdd:PRK06458 222 IGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAaigSDFPGRLLLIFGLLSVLVAAFFLL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 294 TQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLNnEQDIRKMGGLLKTMPFTA 370
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTG 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 311088066 371 SSLIIGSLALTGMPFLTGFYSKDLIIETmnMSHANAWALTVTLI 414
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTA--GLARGPLLIAILLL 421
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-478 |
2.04e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 109.91 E-value: 2.04e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 76 LTISLKADYFSVLFIPVALLVtWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTAN---NLFQLFIGWEGVGIMSF 152
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFL-WICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 153 LLISwwYGRADANTAALQaivynRIGDIGFILSMAWFLV-------HSNTWELQQMFMLNHNPNLVPLMgLLLAATGKSA 225
Cdd:PRK06589 154 FLIG--HTRNNISLSGGY-----KYLKILMISALLLFLPaviliytKTGNLDFVSGGLFSKNQSIILLL-MFIYGIAKTA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTAQTLM-----LCLGSITTLFTA-MCALTQNDIK 299
Cdd:PRK06589 226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIK 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 300 KIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIhNLNNEQDIRKMGGLLKTMPFTASSLIIG 376
Cdd:PRK06589 306 KILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISIS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 377 SLALTGMPFLTGFYSKDLIIETMNMSHaNAWALTVTLIATSLTAVYSTRIIFYVL--MKQPRFTASSMTSENNPLLINSI 454
Cdd:PRK06589 385 SLSLIGIPIFSGFISKFLILLAASEQN-QPWLSIIVMLVVIASSILSALYLLKILssIYKPSLSENSFITKSLPYLMQIS 463
|
410 420
....*....|....*....|....
gi 311088066 455 KRLAIGSIFAGFLLSSNILPMTTP 478
Cdd:PRK06589 464 VITCCCALTLFYFIQILIREFLAY 487
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
134-476 |
2.92e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 109.27 E-value: 2.92e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 134 ANNLFQLFIGWEGVGIMSFLLISwwYGRAD-ANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHNPNLVP 212
Cdd:PRK07234 113 CADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFALI 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 213 LMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMteTNNTAQTLMLcLGSITTLFTAMCA 292
Cdd:PRK07234 191 ALGLLV----KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD--VPGLDLIVRI-FGVGTALLGVLFA 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 293 LTQNDIKKIVAFSTSSQLGLMMVTLGINqphlAFLHICnHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLLKTMPftass 372
Cdd:PRK07234 264 LLEKDLKRMLAFSTISQLGFILAAPLVG----GLYALA-HGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP----- 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 373 LIIGSLALTGMPFLTGFYSKDLIietmnMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLIN 452
Cdd:PRK07234 333 LTMASFSIAGFPLLAGFVSKVLT-----LKNLLPWQAIALNLAAVGTAASFWKFIFLPFSADDEDKKPLPGFWNAIALLL 407
|
330 340
....*....|....*....|....
gi 311088066 453 SIKRLAIGSIFAGFLLsSNILPMT 476
Cdd:PRK07234 408 GGLFLANGVYTEAYTL-GNILKAL 430
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
78-427 |
5.95e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 108.70 E-value: 5.95e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 78 ISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPnINLFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISW 157
Cdd:PRK08377 72 INLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAY 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 158 wYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHNPN-LVPLMGLLLAATG---KSAQFGLHPWL 233
Cdd:PRK08377 151 -NKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDpTVAQVGLALLIFGlavEAELFPLNAWA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 234 PSAMEG-PTPVSALLhSSTMVVAGIFLLIRFHPMTETNNTAQT---LMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQ 309
Cdd:PRK08377 230 PDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSvlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 310 LGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQdIRKMGGLLKTMPFTASSLIIGSLALTGMPFL 386
Cdd:PRK08377 309 VGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLF 387
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 311088066 387 TGFYSKDLIIeTMNMSHANAWALTVTLIATSLTAVYSTRII 427
Cdd:PRK08377 388 NVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLI 427
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
128-425 |
3.91e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.50 E-value: 3.91e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLIsWWYGRADANTAALQAIVYNRIGDIGFILSMAWFlvhsntwelqqmFMLNHN 207
Cdd:MTH00063 89 MGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLS------------CWGGSG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 208 PNLVPLMGLLLAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTeTNNTAQTLMLCLGSITTLF 287
Cdd:MTH00063 156 SFLCCLFFFLIVFT-KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLL-GFSWLSIFFSVLLLLTIFI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 288 TAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLNNEQDIRKMggllKTMP 367
Cdd:MTH00063 234 TGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCV----YSSI 309
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088066 368 FTASSLIIGS----LALTGMPFLTGFYSKDLIIETMNMSHANAWALTVTLIATSLTAVYSTR 425
Cdd:MTH00063 310 LYGSWNLFYLfllvLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
67-398 |
6.29e-24 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 106.23 E-value: 6.29e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 67 HWMTIQTLKLTisLKADYFSVLFIPVALLVTWSIMEFST-WYMQSDPNINLFFKYLLLFLITMLIlvtANNLFQLFIGWE 145
Cdd:PRK08668 54 LTLFFGGFKLT--FTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 146 GVGIMSFLLISwwYGRADANTAALQAIVYNRIGDIGFIlsMAWFLVHSNT-----WELQQMFMLNHNPNLVPLMGLLLAA 220
Cdd:PRK08668 129 IMTFSSFMMVP--MGKKESRKASLKYFVLSAIGAYAML--YAIFLIYAKTgtfdfADISQGLINDTSTGFALIVFLFLLA 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 221 TG--KSAQFGLHPWLPSAM-EGPTPVSALLHS--STMVVAGIFLLIRFHPMTETNNTAQT---------LMLCLGSITTL 286
Cdd:PRK08668 205 FGvaKAGIFPLHVWAPDAYsEAPQSFSAVLSGqlSKLGAYGFLLVLYVLPGTKLFSEFGTyrgvplfnyILAWLGNISII 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 287 FTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLL 363
Cdd:PRK08668 285 VGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLI 363
|
330 340 350
....*....|....*....|....*....|....*
gi 311088066 364 KTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIET 398
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEA 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-423 |
7.66e-22 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 99.12 E-value: 7.66e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 38 LITTYAFLTSLIPATLFTFSQQETI-VSNWHWmtIQTLKLTISLKADYFSVLFIPV-ALLVTWSIMefSTWYMQSDpNIN 115
Cdd:PRK05846 37 IGTLLTLLLSLVLWIGFDSSNAGFQfVEKHPW--IPRFGISYHLGVDGISLLLVVLtALLTPLAVL--ASWEEIKK-RVK 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 116 LFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWyGRADANTAALQAIVYNRIGD----IGFILSMAWFLV 191
Cdd:PRK05846 112 FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSllmlVAIIYLVVVYYN 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 192 HSNTWELQQMFMLNHNPNL-VPLMGLLLAATG-KSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIR 262
Cdd:PRK05846 191 ATGTFDIADLLNLPLPPGVqYWLFLAFFIAFAvKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLR 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 263 FH-PMT-ETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLmmVTLGI---NQPHL--AFLHICNHAFF 335
Cdd:PRK05846 264 FSlPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLS 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 336 KAMLFMCSGSIIHNLNNEqDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIetMNMSHANAWALTVTLIA 415
Cdd:PRK05846 342 SAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTG 418
|
....*...
gi 311088066 416 TSLTAVYS 423
Cdd:PRK05846 419 LILAAVYS 426
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
130-435 |
5.88e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 96.34 E-value: 5.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 130 ILVTaNNLFQLFIGWEGVGIMSFLLISWWYGRAdANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMLNHN-- 207
Cdd:PRK12662 126 ILVS-NDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDlp 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 208 PNLVPLMGLLLAATG---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FHPMTETNNTAQTL-----M 277
Cdd:PRK12662 204 TNRAIQIGVLFIMVGlfiKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYDVFKANFVFTTLpfnnvF 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 278 LCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNeQ 354
Cdd:PRK12662 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGT-T 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 355 DIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAwALTVTLIATSLTAVYSTRIIFYVLMKQ 434
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI-GLVVLLVGSGLSVIYVWKIVEALYFES 440
|
.
gi 311088066 435 P 435
Cdd:PRK12662 441 R 441
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-428 |
8.40e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 92.70 E-value: 8.40e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 71 IQTLKL-------TISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLFLITMLILVTANNLFQLFIG 143
Cdd:PRK07691 57 IQTLELgnwkapfGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVF 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 144 WEGVGIMSFLLISWWyGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQ-----MFMLNHNPNLVPLMGLLL 218
Cdd:PRK07691 137 FEVMLMASYVLIVIG-GTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADisvkiAELSAGQTGLITVVAILF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 219 A---ATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNNTA--QTLMLCLGSITTLFTAMCAL 293
Cdd:PRK07691 216 LfvfAT-KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSftHYLILILALLTIIFGVIGAV 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 294 TQNDIKKIVAFSTSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGSIIHnLNNEQDIRKMGGLLKTMPFTA 370
Cdd:PRK07691 295 AYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLG 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 311088066 371 SSLIIGSLALTGMPFLTGFYSKDLIIETmNMSHANAWALTVTLIaTSLTAVYSTRIIF 428
Cdd:PRK07691 374 WMFFIAALSLAGIPPLSGFYGKFFIVEG-TFEAGFYVSGIIVLL-SSLLVLYSVIKIF 429
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
128-469 |
2.62e-19 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 90.95 E-value: 2.62e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM---FML 204
Cdd:COG1007 115 MMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaaLAA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 205 NHNPNLVPLMGLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF--HPMTETNNTAQTLML 278
Cdd:COG1007 195 GGANSPLLLLGLVLVLAGlafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 279 CLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNNEQD 355
Cdd:COG1007 274 VLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEE 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 356 IRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIetMNMSHANAWALTVTLIATS-LTAVYSTRIIFYVLMKQ 434
Cdd:COG1007 354 IEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVF--SAAVEAGLYWLAVIAVLNSvISAYYYLRVVKAMYFDE 431
|
330 340 350
....*....|....*....|....*....|....*..
gi 311088066 435 P--RFTASSMTSENNPLLINSIKRLAIGsIFAGFLLS 469
Cdd:COG1007 432 PeeEAPISAPPGLRVALVIAALLVLLLG-IFPGPLLD 467
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
78-465 |
7.01e-19 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 90.01 E-value: 7.01e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 78 ISLKADYFSVLFIPVALLVTWSIMEFSTwymqsdPNINLFFKYLLLFLITMLILVTAN------NLFQLFIGWEGVGIMS 151
Cdd:PRK12663 71 IQFTGDSLSALMVTTASFVATAIMAYGF------GDIEHSGRRYGFPPFILLLMAGVIgsfltgDLFNLYVWFEVMLIAS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 152 FLLISWWyGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFM----LNHNPNLVPLMGLLLAATG-KSAQ 226
Cdd:PRK12663 145 FVLITLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrlndMGDTATLTTIALLFLLAFGmKAAL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 227 FGLHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPM--TETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAF 304
Cdd:PRK12663 224 FPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLlfPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGY 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 305 STSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGSIIHnLNNEQDIRKMGGLLKTMPFTASSLIIGSLALT 381
Cdd:PRK12663 303 QVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIG 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 382 GMPFLTGFYSKDLIIETmnMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGS 461
Cdd:PRK12663 382 GLPPFSGFWGKVLLVQG--ALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVV 459
|
....
gi 311088066 462 IFAG 465
Cdd:PRK12663 460 IAMG 463
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
62-391 |
9.88e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 83.16 E-value: 9.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 62 IVSNWHWmtIQTLKLTISLKADYFSVLFIPVALLVTwSIMEFSTWYMQSDPNINLFFkylllflitMLILVTAN------ 135
Cdd:PRK12561 39 LVERYAW--LPQIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKPRLFYFL---------MLVLYSAQigvfla 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 136 -NLFQLFIGWEGVGIMSFLLISWWYGRaDANTAALQAIVYNRIGDIgFILSMAWFLVHSN---TWELQQMFMLNHNPNLV 211
Cdd:PRK12561 107 qDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILVAGLALALSGdtfTFDLAELGAKSYPLALE 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 212 PL--MGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRFHP--MTETNNTAQTLMLCL 280
Cdd:PRK12561 185 LLlyAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFNVqmLPDAHVYFAPALAIL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 281 GSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMCSGSI---IHNLN 351
Cdd:PRK12561 258 GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLgiaaftDLGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088066 352 neqdIRKMGGLLKTMP-----FTASSLiiGSLALTGMpflTGFYS 391
Cdd:PRK12561 335 ----IPNMGGLAKVMPktfalFTASSM--ASLALPGM---SGFVS 370
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
128-469 |
3.67e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 81.41 E-value: 3.67e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMF---ML 204
Cdd:PRK05777 116 MMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAkalAD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 205 NHNPNLVPLMGLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLHSSTMvVAGIFLLIR-----FHPMTETNntaQT 275
Cdd:PRK05777 196 GSGNSLLLLFGLVFLLVGlafKLSAVPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFAVLLRllvvaFGGLSEDW---QQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 276 LMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGSIIHNLNN 352
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGE 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 353 EQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETmnMSHANAWALTVTLIATSL-TAVYSTRIIFYVL 431
Cdd:PRK05777 352 AESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEA--AVEAGLWWLAVIGVLNSAiGAFYYLRVIKLMY 429
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 311088066 432 MKQPR---FTASSMTSENNPLLINSIKRLAIGsIFAGFLLS 469
Cdd:PRK05777 430 FDEPPrdaPVNWPLSAGGAVLSVSALLVLVLG-IFPQPLLD 469
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
164-351 |
1.47e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 79.69 E-value: 1.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 164 ANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFMlnhNPNLVPL-------MGLL--LAATGKSAQFGLHPWLP 234
Cdd:PRK08601 152 AREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLS---NENLAQLgtwektgINLLliLAVMIPAAQWPFQRWLI 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 235 SAMEGPTPVSALLHSStMVVAGIFLLIRFHPMTEtNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMM 314
Cdd:PRK08601 229 ESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFML 306
|
170 180 190
....*....|....*....|....*....|....*..
gi 311088066 315 VTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLN 351
Cdd:PRK08601 307 VQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
223-396 |
1.57e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 79.41 E-value: 1.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 223 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPMTETNNTAQT---LMLCLGSITTLFTAMCALTQNDI 298
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQfsnVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 299 KKIVAFSTSSQLGLMMVTLGINQPHLAF---LHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLLKTMPFTASSLII 375
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180
....*....|....*....|.
gi 311088066 376 GSLALTGMPFLTGFYSKDLII 396
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-422 |
1.69e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 79.63 E-value: 1.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 78 ISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLLfliTMLILVT-------ANNLFQLFIGWEGVGIM 150
Cdd:PRK12665 70 ITLVVDRLSALMLVVSSVVLLAVLVYAIGQGIRDGDEEQPVSIFLP---TYLILVAgvsnaflAGDLFNLYVGFEILLVA 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 151 SFLLISWWyGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFM-LNHNPNLV--PLMGLLLAATG-KSAQ 226
Cdd:PRK12665 147 SYVLLTLG-ATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVrLDELPSGTrtALFAVLLVAFGiKAAV 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 227 FGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFHPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKI 301
Cdd:PRK12665 226 FPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 302 VAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSL 378
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 311088066 379 ALTGMPFLTGFYSKDLIIET-MNMSHANAWALTVTLIATSLTAVY 422
Cdd:PRK12665 380 NLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTLY 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
229-389 |
7.48e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.56 E-value: 7.48e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhpmTETNNTAQ----TLMLCLGSITTLFTAMCALTQNDIKKIVAF 304
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL---SLLGGNAPlwwgVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 305 STSSQLGLMMVTLG-------INQPHLAFL-------HICNHAFFKAMLFMCSGSIIHNlNNEQDIRKMGGLLKTMPFTA 370
Cdd:PRK08042 276 HTLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 311088066 371 SSLIIGSLALTGMPFLTGF 389
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
131-435 |
1.65e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 76.22 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 131 LVTANNLFQLFIGWEGVGIMSFLLIsWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQM--FMLNHNP 208
Cdd:PRK06277 116 IVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIhnALLVNPT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 209 NLVPLMGLLLAATGKSAQFGLHPW--LPSAM--EGPTPVSALLHSS---TMVVAGIFLLIRFHPMTETNNtAQTLMLCLG 281
Cdd:PRK06277 195 SPVIYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTFskfVLVALMLVIFKLFGGLSYFPS-AQGVLIALS 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 282 SITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH---LAFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRK 358
Cdd:PRK06277 274 VLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRK 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 311088066 359 MGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIE-TMNmshANAWALTVTLIATSLTAVYSTRIIFYVLMKQP 435
Cdd:PRK06277 353 LGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQaAMQ---ANMPELAIIMIIVSIGTFVSMMKAFYLIYLKP 427
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
134-422 |
7.82e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 73.97 E-value: 7.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 134 ANNLFQLFIGWEGVGIMSFLLISWWyGRADANTAALQAIVYNRIGDI----GFiLSMAWFLVHSN-TWELQQMFMLNHNP 208
Cdd:PRK06473 126 AQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF-LGLVWLSGASSfDYEPLRSHTLPLST 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 209 NLVPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF--HPMTETNNTAQTLMLCLGSITT 285
Cdd:PRK06473 204 QLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVSV 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 286 LFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQP---HLAFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGL 362
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGL 361
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088066 363 L---KTMPFTASSLIIGSLALTGMPFLTGFYSKDLI---------IETMnmshanawaltVTLIATSLTAVY 422
Cdd:PRK06473 362 LnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVfrgsfpifpVQTL-----------LCMIGTGLTAVY 422
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
71-422 |
1.27e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 70.51 E-value: 1.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 71 IQTLKLTISLKADYFSVLFIPVALLVTWsIMEFSTWYMQSDPNINLFFKYLLLFLITMLILvtANNLFQLFIGWEGVGIM 150
Cdd:PRK07363 66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRLYYSLILLINGGIAGALL--AQNLLLFFLFYELELIP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 151 SFLLISWWYGRADAnTAALQAIVYNRIGD---IGFILSMAWFLVHSN-TWELQQMFMLNHNPNLVPLMGLLLAATGKSAQ 226
Cdd:PRK07363 143 FYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVWLSGSTSfDYDAISTQNLSLNTQLILLTGLLLGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF--HPMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAF 304
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 305 STSSQLGLMMVTLGINQPHL---AFLHICNHAFFKAMLFMCSGsIIHNLNNEQDIRKMGGLL---KTMPFTASSLIIGSL 378
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGM 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 311088066 379 ALTGMPFLTGFYSKDLIIETMNMSHANAWALTVtlIATSLTAVY 422
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCI--VASGLTAVY 422
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
128-477 |
5.42e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 61.14 E-value: 5.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEgVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWELQQMFmlnhn 207
Cdd:MTH00200 17 TLLTFSSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEML----- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 208 pNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNntaqtLMLCLGSITTLF 287
Cdd:MTH00200 91 -GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----ILLLLGLLSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 288 TAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHicnhaFFKAMLFMCSGSIIHNLNNEQDIRKMGGLLKTMP 367
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 368 FTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHaNAWALTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENN 447
Cdd:MTH00200 239 ILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQG-LFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRT 317
|
330 340 350
....*....|....*....|....*....|
gi 311088066 448 PLLINSIKRLAIGSIFAGFLLSSNILPMTT 477
Cdd:MTH00200 318 KSNSNLLVGLLLLLSILGLPLTPQLLFLFF 347
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
84-423 |
1.67e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 60.32 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 84 YFSVL---FIPVALLVTWSIMEFSTwymqsdpninlffkylLLFLITMLIL-------VTANNLFQLFIGWEGVGIMSFL 153
Cdd:MTH00226 106 YFIILtgfIVPCSILISWHSVKYLT----------------KSFLICMLILefllyavFSVLDIFMFYILFEGVLIPMYL 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 154 LISWWYGRADANTAALQAIVYNRIGDIGFILSM-AWFLVHSNTWELQQM---FMLNHNPNLVPLMGLLLAATGKSAQFGL 229
Cdd:MTH00226 170 ILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLfSLYNIHGTTDYLTLAscsHVVSEQTQKWIFLGIFLAMAVKIPIFPF 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 230 HPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNntAQTL---MLCLGSITTLFTAMCALTQNDIKKIVAFS 305
Cdd:MTH00226 250 HIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLG--AQNLapaVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 306 TSSQLGLMMVTL---GINQPHLAFLHICNHAFFKAMLFMCSgSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTG 382
Cdd:MTH00226 328 SVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVA 406
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 311088066 383 MPFLTGFYSKDLIIetMNMSHANAWALTVTLIATSLTAVYS 423
Cdd:MTH00226 407 VPPSGNFIGEYLSI--LSSFNWNPIIGVFVCSGVILSAVYS 445
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
141-421 |
1.81e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 60.49 E-value: 1.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 141 FIGWEGVGIMSFLLISWWYGRaDANTAALQAIVYNRIGDIgFIL----SMAwFLVHSNTWELQQMFMLNHNPNLVPLM-- 214
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FYGDTPTFDMTALAAKDFGLGFQLLCya 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 215 GLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRFHPMTETNNTAQ--TLMLCLGSITT 285
Cdd:PRK02546 218 GLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLLRMNAGMLPDAHAQfaPLLIVLGVVNI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 286 LFTAMCALTQNDIKKIVAFSTSSQLGLMMV------TLGINQphlAFLHICNHAFFKAMLFMCSGSI---IHNLNNEQdi 356
Cdd:PRK02546 291 IYAALTSFAQRNLKRKIAYSSISHMGFVLIgigsftDLGTSG---AMLQMISHGLIGASLFFLVGATydrTHTLMLDE-- 365
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 357 rkMGGLLKTMP-----FTASSLiiGSLALTGMpflTGFYSKDLIIetMNMSHANAWALTVTLIATSLTAV 421
Cdd:PRK02546 366 --MGGVGQKMRkmfamWTACSL--ASLALPGM---SGFVAELMVF--VGFATSDAYTLPFRVVVVFLAAV 426
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
192-442 |
1.91e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 59.45 E-value: 1.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 192 HSNTWELQQMfmlnhnPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpMTETNN 271
Cdd:MTH00112 80 NTGQWDITQL------TNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNS 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 272 TAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLhicnhAFFKAMLFMCSGSIIHNLN 351
Cdd:MTH00112 149 LNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLL-----TFYIYILMTTPMFLTLNTT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 352 NEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHAnAWALTVTLIATSLTAVYSTRIIFYVL 431
Cdd:MTH00112 223 STKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNM-TPTATIMAMLSLLSLFFYLRLTYIST 301
|
250
....*....|.
gi 311088066 432 MKQPRFTASSM 442
Cdd:MTH00112 302 ITLPPNTTNMM 312
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
68-115 |
2.39e-09 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 53.20 E-value: 2.39e-09
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 311088066 68 WMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNIN 115
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYA 48
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
223-392 |
5.58e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 55.40 E-value: 5.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 223 KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFH--PMTETNNTAQTLMLCLGSITTLFTAMCALTQNDIK 299
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFdiPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 300 KIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFkaMLFMCSGS----IIHNLNNEQD-IRKMGGLLKTMPFTASSLI 374
Cdd:CHL00049 306 RMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLA 383
|
170
....*....|....*...
gi 311088066 375 IGSLALTGMPFLTGFYSK 392
Cdd:CHL00049 384 LCLLSLGGIPPLAGFFGK 401
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
128-318 |
2.20e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 53.64 E-value: 2.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 128 MLILVTANNLFQLFIGWEGVGIMSFLLIswwYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTwelqqmFMLNHN 207
Cdd:PRK06459 85 MAIVLTSDNYLLFLAGWEIMTIPSYVAI---ALTKKNKRPAFVFMAFGELSTVLILAGFAWAFIISGT------TNFSYL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 208 PNLVPLMGLLLAATGKSAQFGLH--PWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPMTETN--NTAQTLMLCLGS 282
Cdd:PRK06459 156 PSPVPLILASFGFIIKMGMMPFLvsEWLPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIpiGYFGLTILAIGA 234
|
170 180 190
....*....|....*....|....*....|....*.
gi 311088066 283 ITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLG 318
Cdd:PRK06459 235 FSILFGALYAYVSENVKGLLAFSTIENNGAILVALG 270
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
276-405 |
1.01e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 51.65 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 276 LMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPH-----LAFLHICNHAFFKAMLFMCSGSIIhNL 350
Cdd:PRK12664 203 ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NR 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 311088066 351 NNEQDIRKMGGLLKtMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHAN 405
Cdd:PRK12664 282 TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
136-389 |
1.02e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 51.60 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 136 NLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMawFLVHSNTWELQQMFMLN----HNPNLV 211
Cdd:MTH00204 133 DLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGI--FQLYSITGTTDYQILLNiklpLSIQKW 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 212 PLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRFH--PMTETNNTAQTLMLCLGS 282
Cdd:MTH00204 211 LLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFLRFSwpLFPAASEYFAPLIVMLSV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 283 ITTLFTAMCALTQNDIKKIVAFSTSSQLGLmmVTLGINQPHL-----AFLHICNHAFFKAMLFMCSgSIIHNLNNEQDIR 357
Cdd:MTH00204 284 IAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIK 360
|
250 260 270
....*....|....*....|....*....|..
gi 311088066 358 KMGGLLKTMPFTASSLIIGSLALTGMPFLTGF 389
Cdd:MTH00204 361 YYRGLTLTMPLFVIIMLVLSLANMGFPLSCNF 392
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
202-422 |
2.04e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 46.85 E-value: 2.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 202 FMLNHNPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhpmteTNNTAQTLMLCLG 281
Cdd:MTH00041 84 WSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNLLNSNILILCG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 282 SITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINqPHLAFLHICNHAFFKAMLFmcsgsIIHNLNNEQDIRKMGG 361
Cdd:MTH00041 159 ILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIF-----LIGNNFSLSTLSHLNK 232
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 311088066 362 LLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMShaNAWALTVTLIATSLTAVY 422
Cdd:MTH00041 233 LSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQN--NSILISIILIIGSLLSLF 291
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
68-435 |
2.05e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 47.35 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 68 WMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYM-QSDPNINLFFKYLLLFLITMLILVTANNLFQLFIGWEG 146
Cdd:PRK02504 62 WDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLET 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 147 VGIMSFLLISWWYGRADANTAALQaivYNRIGDIgfilSMAWFL--------VHSNTWELQQMFM-LNHNPNLVPLMGLL 217
Cdd:PRK02504 142 LSIASYLLTGYMKRDPRSNEAALK---YLLIGAA----SSAIFLygssllygLSGGSTQLSAIALaLITSPSLGLALALV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 218 LAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFhpmtetnntaqtLMLCLGSITT----LFTA 289
Cdd:PRK02504 215 FVIAGiafKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 290 MC----------ALTQNDIKKIVAFSTSSQLGLMMVTLGINqphlaflhicNHAFFKAM-------LFMCSGS----IIH 348
Cdd:PRK02504 282 LAilsmvlgnvvALAQTSMKRMLAYSSIGQAGFVMIGLVAG----------TEAGYASMvfyllayLFMNLGAfacvILF 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 349 NLNNEQD-IRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHAnAWALTVTLIATSLTAVYSTRII 427
Cdd:PRK02504 352 SLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGL-YLLVLVGLVTSVISIYYYIRVI 430
|
....*...
gi 311088066 428 FYVLMKQP 435
Cdd:PRK02504 431 KMMVVKEP 438
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
230-463 |
2.73e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.56 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFHPmtetnntAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTS 307
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFsILVSIGL-------NVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 308 SQLGLMMVTLGIN-----QPHLAFLhicnhaFFKAMLFMCSGSIIHNLNNEQD-IRKMGGLLKTMPFTASSLIIGSLALT 381
Cdd:MTH00196 186 GHMGFVLWGIEIGsfesiQASLVYL------FIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIA 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 382 GMPFLTGFYSKDLIIETMNMSHANAWALTvTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIKRLAIGS 461
Cdd:MTH00196 260 GIPPLVGFLGKWLILLSGVVYQYYLIFLL-AVFCSVIAGVYYVRIVKILFFQANSFLLISTKILKKENKINLRKALLIGF 338
|
..
gi 311088066 462 IF 463
Cdd:MTH00196 339 SL 340
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
37-423 |
3.19e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 46.86 E-value: 3.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 37 KLITTYAFLTSLIPATLFTFSQQETIVSNWHwmtiqtlKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINL 116
Cdd:MTH00206 19 KWLWRSTTFFSFLIALLFLLWFKWSSEVGWS-------FSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQ 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 117 FFKYLLLFLITMLILVT--ANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSN 194
Cdd:MTH00206 92 RIYITLLIVLQLFLILFfsSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLG 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 195 TWELQQMFMLNHNPNLVPL--MGLLLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHP 265
Cdd:MTH00206 172 SLSLYILYFSKLTTWNNNLwwLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIIL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 266 M-TETNNTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSSQLGLM------MVTLGINQphlAFLHICNHAFFKAM 338
Cdd:MTH00206 245 IlGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVtagilsGSPWGFKG---ALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 339 LFmCSGSIIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLII-ETMNMSHanaWALTVTLIATS 417
Cdd:MTH00206 322 LF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIItSLFSWSN---FTLPLLGLGFL 397
|
....*.
gi 311088066 418 LTAVYS 423
Cdd:MTH00206 398 FTAIYS 403
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
229-468 |
4.31e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 46.07 E-value: 4.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNntaqtLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSS 308
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 309 QLGLMMVTLGINqPHLAFLHICNHAFFKAMLFMCSGSIihnlnNEQDIRKMG-GLLKTMPFTASSLIIgSLALTGMPFLT 387
Cdd:MTH00070 186 HLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFLMLMNL-----NSTNINKLSsSWSKNPTLTSMMMLT-LLSLGGLPPTT 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 388 GFYSKDLIIETMNMSHANAWAlTVTLIATSLTAVYSTRIIFYVLMKQPRFTASSMTSENNPLLINSIkrLAIGSIFAGFL 467
Cdd:MTH00070 259 GFIPKWLILQELTKQNLTTLA-TLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNL--LSLTIILSLML 335
|
.
gi 311088066 468 L 468
Cdd:MTH00070 336 L 336
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
211-437 |
1.40e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.39 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 211 VPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMTETNntaqtLMLCLGSITTLFTAM 290
Cdd:MTH00011 89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILP-----MMTSMAAMSALAGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 291 CALTQNDIKKIVAFSTSSQLGLMMVtLGINQPHLAFLHICNHAFFKAMLFMcsgsiIHNLNNEQDIRKMGGLLKTMPFTA 370
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLML-----LFAYLNAFSTKFNSKISSMSQTTS 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 311088066 371 SSLIIGSLALTGMPFLTGFYSKDLIIETMnMSHANAWALTVTLIATSLTAVYSTRIIFYVLMKQPRF 437
Cdd:MTH00011 238 MSLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTF 303
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
203-475 |
1.54e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.11 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 203 MLNHNPNLVPLMGLLLAATG-KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPmtetNNTAQTLMLCLG 281
Cdd:MTH00144 76 IMYNLSFSWFSMSLLLLGLClKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLD----LYWLAYLLCVIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 282 SITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHICNHAFFKAMLFMCSGSIIHNLnneqdirKMGG 361
Cdd:MTH00144 152 VLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDLG 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 362 LLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIetMNMSHANAWALTVTLIATSLTAVYstriiFYVlmkqpRFTASS 441
Cdd:MTH00144 225 SLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVL--ISSMESSPLLLILLLLLGSLISLF-----FYL-----SVFFSS 292
|
250 260 270
....*....|....*....|....*....|....
gi 311088066 442 MTSENNPLLINSIKRLAIGSIFAGFLLSSNILPM 475
Cdd:MTH00144 293 FLSSSKSKKSNSSKVLNSSIISLNLLGGLLFLLL 326
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
230-427 |
3.24e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 43.47 E-value: 3.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFHPMTetnntaQTLMLClGSITTLFTAMCALTQNDIKKIVAFSTS 307
Cdd:MTH00199 210 HMWAPDVYEGaPTITTALL--ATVPKIGVFsILVQIGPVT------NVVLIC-AVLSIIYGAIGALNQTKIKRLLAYSGI 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 308 SQLGLMMVTLGIN-----QPHLAFLHIcnhaffKAMLFMCSGSIIHNLNNEQD-IRKMGGLLKTMPFTASSLIIGSLALT 381
Cdd:MTH00199 281 GHMGFILFGVAIGsfesiQASLIYMII------YVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIA 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 311088066 382 GMPFLTGFYSKDLIIETMNMShaNAWALTVTLIATSLTA-VYSTRII 427
Cdd:MTH00199 355 GIPPLAGFLSKWLILLSGVSS--GYYLICIIAVLSSVIAgVYYVRVV 399
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
201-454 |
3.59e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.81 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 201 MFMLNHNPNLVPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpmteTNNTAQTLMLCL 280
Cdd:MTH00160 78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL--------SYLINNNFIIII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 281 GSITTLFTAMCALTQNDIKKIVAFSTSSQLGLMMVTLGINQPHLAFLHIcnhaffkaMLFMCSGSIIHNLNNEQ--DIRK 358
Cdd:MTH00160 150 IILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFL--------IYSIISLSIILLFNKFNifFLNQ 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 359 MGGLLKTMPFTASSLIIGSLALTGMPFLTGFYSKDLIIETMNMSHANAWaLTVTLIATSLTAVYSTRIIFYVLMKQPRFT 438
Cdd:MTH00160 222 LFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFL-LFILIMSSLITLYFYLRISYSSLMLNYNKN 300
|
250
....*....|....*.
gi 311088066 439 ASSMTSENNPLLINSI 454
Cdd:MTH00160 301 KWNLKKKKNKFSLILN 316
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
44-313 |
7.34e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 38.95 E-value: 7.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 44 FLTSLIPATLftfsqqetIVSNWHWMTIQTLKLTISLKADYFSVLFIPVALLVTWSIMEFSTWYMQSDPNINLFFKYLLL 123
Cdd:MTH00014 27 FSTLLLLSLF--------TLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRADANTAALQAIVYNRIGDIGFILSMAWFLVHSNTWelqQMFM 203
Cdd:MTH00014 99 LNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLM 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 204 LNHNPNLVPLMGL-----LLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPMTETNN 271
Cdd:MTH00014 176 SSMEPPSIYLMNLwwlitILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHIN 248
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 311088066 272 TAQTLMLCLGSIT-TLFTAMCALTQNDIKKIVAFSTSSQLGLM 313
Cdd:MTH00014 249 KSLSAPFSSISLVgAVITSLICIRQPDLKSLIAYSSVGHMGLM 291
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
229-423 |
9.69e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 38.63 E-value: 9.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPmtetnnTAQTLMLCLGSITTLFTAMCALTQNDIKKIVAFSTSS 308
Cdd:MTH00135 111 LHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP------TNPTLLITLGLTSTLVGGWGGLNQTQLRKILAYSSIA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 309 QLGLMMVTLGINqPHLAFLHICNHAFFKAMLFMcsgsiIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFLTG 388
Cdd:MTH00135 185 HLGWMILVLQFS-PSLTLLALLTYIIMTSSAFL-----TFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLPPLTG 258
|
170 180 190
....*....|....*....|....*....|....*
gi 311088066 389 FYSKDLIIETMNMSHAnawALTVTLIAtsLTAVYS 423
Cdd:MTH00135 259 FMPKWLILQELTKQDL---PLTATLAA--LSALLS 288
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
227-447 |
9.96e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 38.50 E-value: 9.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpMTETNNTAQTLMLCLGSIttLFTAMCALTQNDIKKIVAFST 306
Cdd:MTH00197 96 FPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL-----AFNSSSFMGLLICSVLSS--LIGGIGGMNQSNIRQLLAYSS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311088066 307 SSQLGLMMVTLGINQPHLAFLHIcnhAFFKAMLFMCSgsiIHNLNNEQDIRKMGGLLKTMPFTASSLIIGSLALTGMPFL 386
Cdd:MTH00197 169 IGHTGWMLMSLVYSPSIFMLYYL---IYFVIMFMLFL---FLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPL 242
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 311088066 387 TGFYSKDLIIETMNMShaNAWALTVTLI-ATSLTAVYSTRIIFYVLMKQPRFTASSMTSENN 447
Cdd:MTH00197 243 SGFFLKWLILTSLLSS--NISLITFMLIlSTCFSLYYYLSLAYKSLILSNWMINFLMKINLL 302
|
|
| |
