|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
29-641 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1211.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 29 IASSQPLRAKQVSTSESvKYPVIDHTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMT 108
Cdd:PTZ00139 5 PAFNRLTRTFFSGHLSS-AYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 109 KDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEYGKGGQAYRCAAVADR 188
Cdd:PTZ00139 84 EDDWRWHAYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 189 TGHSILHTLYGQSLKHNTNFFIEYFAMDLIM-EGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTG 267
Cdd:PTZ00139 164 TGHAMLHTLYGQSLKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 268 DGNAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREG 347
Cdd:PTZ00139 244 DGGAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 348 RGVGPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDENGKDKIVP 427
Cdd:PTZ00139 324 RGCGPNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVP 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 428 GLYAAGEAACVSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRL 507
Cdd:PTZ00139 404 GLLAAGEAACASVHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRK 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 508 DMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHA 587
Cdd:PTZ00139 484 RMQRTMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHA 563
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 31076658 588 REDYPERDDKNWIKHTLTWQH--KTGDpVTLKYRAVTrTTMDENEVKPVPPFKRVY 641
Cdd:PTZ00139 564 RDDFPERDDKNWMKHTLSYIRdvKKGK-VRLTYRPVI-TTPLDNEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
21-641 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1115.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 21 STSSTLKKIASSQPLRAKQVSTSESVKYPVIDHTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGI 100
Cdd:PLN00128 17 SASSSLASASLRTALSRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGI 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 101 NAALGNMTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEYGKGGQAY 180
Cdd:PLN00128 97 NAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 181 RCAAVADRTGHSILHTLYGQSLKHNTNFFIEYFAMDLIMEG-GECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSC 259
Cdd:PLN00128 177 RCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSdGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 260 TSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRA 339
Cdd:PLN00128 257 TSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRS 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 340 MTVEIREGRGVGPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDE 419
Cdd:PLN00128 337 MTMEIREGRGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKG 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 420 NGKDKIVPGLYAAGEAACVSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQIRTSQGP 499
Cdd:PLN00128 417 DDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGS 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 500 KHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNR 579
Cdd:PLN00128 497 LPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEAR 576
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 31076658 580 KESRGAHAREDYPERDDKNWIKHTLTWQHKtgDPVTLKYRAVTRTTMDEnEVKPVPPFKRVY 641
Cdd:PLN00128 577 KESRGAHAREDFTKRDDENWMKHTLGYWEE--GKVRLDYRPVHMNTLDD-EVETFPPKARVY 635
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
73-641 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 957.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 73 LAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVP 152
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 153 FSRTKEGKIYQRAFGGQSLEYGKGGQAYRCAAVADRTGHSILHTLYGQSLKHNTNFFIEYFAMDLIMEGGECRGVIAMNL 232
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 233 EDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLL 312
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 313 NSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVGPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEP 392
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 393 IPVLPTVHYNMGGIPTRFTGEVLTiDENGKDKIVPGLYAAGEAACVSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPN 472
Cdd:TIGR01816 321 IPVLPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 473 TPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIW 552
Cdd:TIGR01816 400 SDVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVW 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 553 NTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTLTWQHKTGDPVTLKYRAVTRTTMDENEVK 632
Cdd:TIGR01816 480 NTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSYVDINTGKVLLSYKPVIFKPLTVADFE 559
|
....*....
gi 31076658 633 PVPpfkRVY 641
Cdd:TIGR01816 560 PKK---RVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
56-641 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 846.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTKDD-WRWHFYDTVKGSDWLGDQDAIHY 134
Cdd:TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDPDDsWEWHAYDTVKGSDYLADQDAVEY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 135 MTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLKHNTNFFIEYFA 214
Cdd:TIGR01812 81 MCQEAPKAILELEHWGVPFSRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 215 MDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIY 294
Cdd:TIGR01812 153 LDLIHDDGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLY 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 295 GAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVG-PEKDHCYLQLSHLPAEILKERL 373
Cdd:TIGR01812 233 PSGILITEGCRGEGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 374 PGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTidengkDKIVPGLYAAGEAACVSVHGGNRLGANSLLD 453
Cdd:TIGR01812 313 PQIRELAKYFAGVDPVKEPIPVRPTAHYSMGGIPTDYTGRVIC------ETIVKGLFAAGECACVSVHGANRLGGNSLLE 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 454 IVVFGRACALHIKD-TLEPNTPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKN 532
Cdd:TIGR01812 387 LVVFGRIAGEAAAEyAAKTGNPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDE 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 533 IARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTLTWQHKTGd 612
Cdd:TIGR01812 467 IEELRERYKNVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYYDNPG- 545
|
570 580
....*....|....*....|....*....
gi 31076658 613 PVTLKYRAVTRTTMdenevkpvPPFKRVY 641
Cdd:TIGR01812 546 TPRLEYKPVTITKY--------EPAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
54-625 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 614.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 54 TYDAIVVGAGGAGLRATFGLAEAG---FNTACITKLFPTRSHTVAAQGGINAALGNMTKDDWRWHFYDTVKGSDWLGDQD 130
Cdd:PRK06069 5 KYDVVIVGSGLAGLRAAVAAAERSggkLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 131 AIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLK-HNTNFF 209
Cdd:PRK06069 85 AVEVFVREAPEEIRFLDHWGVPWSRRPDGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRfDNIHFY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 210 IEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFH 289
Cdd:PRK06069 157 DEHFVTSLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 290 PTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVGPEKDHCY--LQLSHLPAE 367
Cdd:PRK06069 237 PTGLVPSGILITEAARGEGGYLINKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGLCYvgLDLRHLGEE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 368 ILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDengkDKIVPGLYAAGEAACVSVHGGNRLG 447
Cdd:PRK06069 317 KINERLPLIREIAKKYAGIDPVTEPIPVRPAAHYTMGGIHTDVYGRVLTAD----GEWVRGLWAAGEAAAVSVHGANRLG 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 448 ANSLLDIVVFGR-ACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETL 526
Cdd:PRK06069 393 SNSTAECLVWGRiAGEQAAEYALKRPAPSSPVEKLAEKEEKRIFDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGL 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 527 QEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTLTw 606
Cdd:PRK06069 473 AEALKKIKKLRERYKNVRIEDKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLA- 551
|
570
....*....|....*....
gi 31076658 607 qHKTGDPVTLKYRAVTRTT 625
Cdd:PRK06069 552 -YYTGGGPKVTYTPVTITK 569
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
55-632 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 582.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 55 YDAIVVGAGGAGLRATFGLAEAG--FNTACITKLFPTRSHTVAAQGGINAALGNM-TKDDWRWHFYDTVKGSDWLGDQDA 131
Cdd:PRK05945 4 HDVVIVGGGLAGCRAALEIKRLDpsLDVAVVAKTHPIRSHSVAAQGGIAASLKNVdPEDSWEAHAFDTVKGSDYLADQDA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 132 IHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLKHNTNFFIE 211
Cdd:PRK05945 84 VAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 212 YFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPT 291
Cdd:PRK05945 156 WYVMRLILEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 292 GIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVGPE----KDHCYLQLSHLPAE 367
Cdd:PRK05945 236 GLYPVGVLISEAVRGEGAYLINSEGDRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKE 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 368 ILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLtideNGKDKIVPGLYAAGEAACVSVHGGNRLG 447
Cdd:PRK05945 316 KIMSRVPFCWEEAHRLVGVDAVTEPMPVRPTVHYCMGGIPVNTDGRVR----RSADGLVEGFFAAGECACVSVHGANRLG 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 448 ANSLLDIVVFGR----ACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQirtsQGPKHTSEIRLDMQKTMQRDVSVFRME 523
Cdd:PRK05945 392 SNSLLECVVYGRrtgaAIAEYVQGRKLPEVDEQRYLKEAKQRIQALLDQ----SGTYRINQLRQQFQDCMTDHCGVFRTE 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 524 ETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHT 603
Cdd:PRK05945 468 EIMQEGLEKIQQLKQQYEQIYLDDKGKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHT 547
|
570 580
....*....|....*....|....*....
gi 31076658 604 LTWQHKTGdpVTLKYRAVTRTTMDENEVK 632
Cdd:PRK05945 548 LAYYSPAG--IDIQYMPVVITMFEPQERK 574
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
54-641 |
0e+00 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 545.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 54 TYDAIVVGAGGAGLRATFGLAEA--GFNTACITKLFPTRSHTVAAQGGiNAALgnmTKDD--WRWHFYDTVKGSDWLGDQ 129
Cdd:PRK09231 4 QADLAIIGAGGAGLRAAIAAAEAnpNLKIALISKVYPMRSHTVAAEGG-SAAV---AQDHdsFDYHFHDTVAGGDWLCEQ 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 130 DAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLKH-NTNF 208
Cdd:PRK09231 80 DVVEYFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYpQIQR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 209 FIEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQF 288
Cdd:PRK09231 152 FDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQY 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 289 HPTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYA---------PTAK--DLASRDVVSRAMTVEIREGRGV-GPEKDH 356
Cdd:PRK09231 232 HPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTIsTPRGDV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 357 CYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGKDKIvPGLYAAGEAA 436
Cdd:PRK09231 312 VYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIET---------DQNCETRI-KGLFAVGECS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 437 CVSVHGGNRLGANSLLDIVVFGR----ACALHIKDTlePNTPHKPLAADAGlDSLKFLDQIRTSQGPKHTSEIRLDMQKT 512
Cdd:PRK09231 382 SVGLHGANRLGSNSLAELVVFGRvageQAAERAATA--GPGNEAALDAQAA-DVEQRLKALVNQEGGENWAKIRDEMGLS 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 513 MQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHARED-- 590
Cdd:PRK09231 459 MEEGCGIYRTPELMQKTIDKLAELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDeg 538
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 31076658 591 YPERDDKNWIKHTLTWQHKTGDPvTLKYRAVTRTTMdenevkpvPPFKRVY 641
Cdd:PRK09231 539 CTERDDVNFLKHTLAFYNADGTP-RIEYSDVKITKS--------PPAKRVY 580
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
55-624 |
1.49e-171 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 500.57 E-value: 1.49e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 55 YDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAAL-GNMT-KDDWRWHFYDTVKGSDWLGDQDAI 132
Cdd:PRK06452 6 YDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 133 HYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLKHNTNFFIEY 212
Cdd:PRK06452 86 ELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 213 FAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTG 292
Cdd:PRK06452 158 FSLDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 293 IYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVgpEKDHCYLQLSHLPAEILKER 372
Cdd:PRK06452 238 LYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKER 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 373 LPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIptrftgevlTIDENGKDKIVPGLYAAGEAACVSVHGGNRLGANSLL 452
Cdd:PRK06452 316 LALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGI---------DVDIDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 453 DIVVFGRACALHI-----KDTLEPNTPHKPLAADAGLDSLKFLdqirTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQ 527
Cdd:PRK06452 387 DTLVFGQVTGRTVvqflkSNPGNPTSNYEKEAEKVVDDAYKFV----KSESGVHFGQILEKLRDTMWDYVGIYRDEGGLL 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 528 EGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTLTWQ 607
Cdd:PRK06452 463 NAMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIAYL 542
|
570
....*....|....*..
gi 31076658 608 hkTGDPVTLKYRAVTRT 624
Cdd:PRK06452 543 --RGNTVEVTFKPVKIT 557
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
53-604 |
3.77e-171 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 498.09 E-value: 3.77e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 53 HTYDAIVVGAGGAGLRATFGLAEAGfNTACITKLFPTRSHTVAAQGGINAALGNmtKDDWRWHFYDTVKGSDWLGDQDAI 132
Cdd:COG0029 3 LKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 133 HYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSleygkggqAYRCAAVADRTGHSILHTLYGQSLKH-NTNFFIE 211
Cdd:COG0029 80 RVLVEEGPERIRELIELGVPFDRDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHpNITVLEN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 212 YFAMDLIME-GGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHP 290
Cdd:COG0029 152 HFAVDLITDaDGRCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 291 TGIYGAGC---LITEGCRGEGGYLLNSKGERFMERYAPTAkDLASRDVVSRAMTVEIREGRGvgpekDHCYLQLSHLPAE 367
Cdd:COG0029 232 TALYHPGApsfLISEAVRGEGAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 368 ILKERLPGISETAAIFaGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGK-DkiVPGLYAAGEAACVSVHGGNRL 446
Cdd:COG0029 306 FIRERFPTIYARCLEL-GIDITKEPIPVAPAAHYTMGGVAT---------DLDGRtS--IPGLYAVGEVACTGVHGANRL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 447 GANSLLDIVVFGRACALHIKDTLEPNTPHKPLAAdagldslkFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETL 526
Cdd:COG0029 374 ASNSLLEGLVFGRRAAEDIAARLAESPLPPEIPE--------WDESVTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGL 445
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 31076658 527 QEGvknIARVDGTYKDIGIRDRGLIWNtdlvEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKnWIKHTL 604
Cdd:COG0029 446 ERA---LRRLELLREEIEEYANFRVSR----DLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPA-WRRHTV 515
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
53-641 |
5.89e-165 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 487.18 E-value: 5.89e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 53 HTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTK---DDWRWHFYDTVKGSDWLGDQ 129
Cdd:PRK08626 4 IYTDALVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKgegDNEDVHFADTVKGSDWGCDQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 130 DAIHYMTKEAPKAVLELEHFGVPFSRTKEGK---------------------IYQRAFGGQsleygkggQAYRCAAVADR 188
Cdd:PRK08626 84 EVARMFVHTAPKAVRELAAWGVPWTRVTAGPrtvvingekvtitekeeahglINARDFGGT--------KKWRTCYTADG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 189 TGHSILHTLYGQSLKHNTNFFIEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGD 268
Cdd:PRK08626 156 TGHTMLYAVDNEAIKLGVPVHDRKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGI 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 269 GNAMVSRAGL-PLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREG 347
Cdd:PRK08626 236 GAAIALETGVaPLGNMEAVQFHPTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 348 RGV-GPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDengkdkiv 426
Cdd:PRK08626 316 KGVkSPYGPHLWLDIRILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYGLK-------- 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 427 pGLYAAGEAACVSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPHKP--LAADAGLDSLKFLDQIRTSQGPKHTSE 504
Cdd:PRK08626 388 -GLFSAGEAACWDMHGFNRLGGNSLAETVVAGMIVGKYVADFCLGNELEIDtaLVEKFVKKQQDRIDELIAGEGKENVFE 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 505 IRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRG 584
Cdd:PRK08626 467 IKNEMQEIMMEKVGIFRNGPELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRG 546
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 31076658 585 AHAREDYPERDDKNWIKHTLT-WQHKTGDPVTLKYRAVTRTTMDenevkpVPPFKRVY 641
Cdd:PRK08626 547 AHAREDYPKRNDRDWLNRTLAsWPEGEALEPTLEYEPLDVMKME------LPPGFRGY 598
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
52-465 |
1.88e-154 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 452.37 E-value: 1.88e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 52 DHTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTK----DDWRWHFYDTVKGSDWLG 127
Cdd:COG1053 1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQKaageDSPEEHFYDTVKGGDGLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 128 DQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQraFGGQSleygkggqAYRCAAVADRTGHSILHTLYGQSLKHNTN 207
Cdd:COG1053 81 DQDLVEALAEEAPEAIDWLEAQGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 208 FFIEYFAMDLIMEGGECRGVIAMNlEDGSIHRFRAHKTILATGGYGRAY------------FSCTSAHTCTGDGNAMVSR 275
Cdd:COG1053 151 IFTETEVLDLIVDDGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 276 AGLPLQDLEFVQFHPTGIYGAGCLITEGCRG-EGGYLLNSKGERFMERYAPtakdlasRDVVSRAMTVEIREGrgvgpek 354
Cdd:COG1053 230 AGAALADMEFVQFHPTGLPGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEP------- 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 355 DHCYLQLSHLP-------------AEILKErLP--------GISETAAIF-----AGVDVTKE-----------PIPVLP 397
Cdd:COG1053 296 AYLVLDLRHRRrleeyleagylvkADTIEE-LAaklgidaaELAATVARYnaaakAGVDPRGTclgpikegpfyAIPVRP 374
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 31076658 398 TVHYNMGGIPTRFTGEVLTIDengkDKIVPGLYAAGEaACVSVHGGNRLGANSLLDIVVFGRACALHI 465
Cdd:COG1053 375 GVHYTMGGLRVDADARVLDAD----GTPIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHA 437
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
56-611 |
1.93e-146 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 435.56 E-value: 1.93e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGlAEAGFNTACITK-LFPTRSHTVAAQGGINAALGNmtKDDWRWHFYDTVKGSDWLGDQDAIHY 134
Cdd:PRK06263 9 DVLIIGSGGAGARAAIE-AERGKNVVIVSKgLFGKSGCTVMAEGGYNAVLNP--EDSFEKHFEDTMKGGAYLNDPKLVEI 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 135 MTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSleygkggqaYR--CAAvADRTGHSILHTLYGQSLKHNTNFFIEY 212
Cdd:PRK06263 86 LVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQS---------FNrtCYA-GDRTGHEMMMGLMEYLIKERIKILEEV 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 213 FAMDLIM-EGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPT 291
Cdd:PRK06263 156 MAIKLIVdENREVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 292 GI----YGAGCLITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVgpekDH--CYLQLSHLP 365
Cdd:PRK06263 236 GMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGT----NHggVYLDVTHLP 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 366 AEILKERLPGISETAAIFaGVDVTKEPIPVLPTVHYNMGGIPtrftgevltIDENGKDKIvPGLYAAGEAACvSVHGGNR 445
Cdd:PRK06263 312 DEVIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGGIR---------INEDCETNI-PGLFACGEVAG-GVHGANR 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 446 LGANSLLDIVVFGRACALHIKDTLEpNTPHKPLAADAGLDSLKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEET 525
Cdd:PRK06263 380 LGGNALADTQVFGAIAGKSAAKNAE-NNEFKKVNRSVEEDIARIKSEIKFLNGSINPYDLIDELKKTMWDYVSIVRNEKG 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 526 LQEGVKNIARVDGTYKDIGIRDRgliwnTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKnWIKHTLT 605
Cdd:PRK06263 459 LKKALEEINELKEKLKDLKVNGI-----VDFNKALELENMILVAELVIKSALLRKESRGAHYREDYPETNDE-WFGNIIL 532
|
....*.
gi 31076658 606 WQHKTG 611
Cdd:PRK06263 533 NKNKIK 538
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
56-451 |
2.24e-146 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 430.17 E-value: 2.24e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAAL-GNMTK-DDWRWHFYDTVKGSDWLGDQDAIH 133
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDALGnPPQGGiDSPELHPTDTLKGLDELADHPYVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 134 YMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSleygkgGQAYRCAAVADR-----TGHSILHTLYGQSLKHNTNF 208
Cdd:pfam00890 81 AFVEAAPEAVDWLEALGVPFSRTEDGHLDLRPLGGLS------ATWRTPHDAADRrrglgTGHALLARLLEGLRKAGVDF 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 209 FIEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHK-TILATGGYGR---------AYFSCTSAHTCTGDGNAMVSRAGL 278
Cdd:pfam00890 155 QPRTAADDLIVEDGRVTGAVVENRRNGREVRIRAIAaVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 279 PLQD--LEFVQFHPTGIYG----AGCLItEGCRGEGGYLLNSKGERFMeryaptaKDLASRDVVSRAMT-VEIREGRGvg 351
Cdd:pfam00890 235 ALTDdlMEFVQFHPTSLVGirlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG-- 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 352 pekDHCYLQLSH-LPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFTGEVLTIDengkDKIVPGLY 430
Cdd:pfam00890 305 ---ANVYLDASGsLDAEGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLDAD----GQPIPGLY 377
|
410 420
....*....|....*....|.
gi 31076658 431 AAGEAACVSVHGGNRLGANSL 451
Cdd:pfam00890 378 AAGEVACGGVHGANRLGGNSL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
53-636 |
6.24e-136 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 411.35 E-value: 6.24e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 53 HTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNM-TKDDWRWHFYDTVKGSDWLGDQDA 131
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 132 IHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQslEYGkggqayRCAAVADRTGHSILHTL-------------- 197
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGH--TYP------RLAHVGDRTGLELIRTLqqkivslqqedhae 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 198 ---YGQSLKhntnFFIEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVS 274
Cdd:PRK07803 159 lgdYEARIK----VFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALAL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 275 RAGLPLQDLEFVQFHPTGIYGA----GCLITEGCRGEGGYLLNSKGERFMERYAP------TA----------------- 327
Cdd:PRK07803 235 RAGATLINMEFVQFHPTGMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqYAeteeeadrwykdndnnr 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 328 --KDLASRDVVSRAMTVEIREGRGvgpeKDH--CYLQL-SHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYN 402
Cdd:PRK07803 315 rpPELLPRDEVARAINSEVKAGRG----SPHggVYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYV 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 403 MGGIptrftgEVltiDENGKDKIVPGLYAAGEAACvSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPhKPLAADA 482
Cdd:PRK07803 391 MGGV------EV---DPDTGAATVPGLFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGS-RPAVSEE 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 483 GLDSLK--FLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGI---RDRGLIWNTdlv 557
Cdd:PRK07803 460 AVDAAAreALAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVeghRQYNPGWHL--- 536
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 31076658 558 eALELRNLLTCAVQTANAALNRKESRGAHAREDYPERdDKNWIKHTLtwqhktgdpVTLKYRAVTRTTMDENEVKPVPP 636
Cdd:PRK07803 537 -ALDLRNMLLVSECVARAALERTESRGGHTRDDHPGM-DPEWRRINL---------VCRADPVGGHVTVTRQPQPPMRP 604
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
29-596 |
9.86e-113 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 350.55 E-value: 9.86e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 29 IASSQPLRAKQVSTS-----ESVKYpvidhtYDAIVVGAGGAGLRATFGLAEAGfNTACITKLFPTRSHTVAAQGGINAA 103
Cdd:PLN02815 5 AATRKPIGAERASSAsrlddESTKY------FDFLVIGSGIAGLRYALEVAEYG-TVAIITKDEPHESNTNYAQGGVSAV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 104 LGnmTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSleygkggqAYRCA 183
Cdd:PLN02815 78 LD--PSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDHGEDGNLHLAREGGHS--------HHRIV 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 184 AVADRTGHSILHTLYgQSLKHNTN--FFIEYFAMDLIM--EGGE--CRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYF 257
Cdd:PLN02815 148 HAADMTGREIERALL-EAVKNDPNitFFEHHFAIDLLTsqDGGSivCHGADVLDTRTGEVVRFISKVTLLASGGAGHIYP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 258 SCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGYLLNSKGERFMERYAP 325
Cdd:PLN02815 227 STTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenafLITEAVRGDGGILYNLAGERFMPLYDE 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 326 TAkDLASRDVVSRAMTVEIREGRgvgpEKdHCYLQLSHLPAEILKERLPGIsetAAIFA--GVDVTKEPIPVLPTVHYNM 403
Cdd:PLN02815 307 RA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPREEILSHFPNI---AAECLkrGLDITKQPIPVVPAAHYMC 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 404 GGIPTRFTGEVltidengkdkIVPGLYAAGEAACVSVHGGNRLGANSLLDIVVFGR----ACALHIKDTL----EPNTPH 475
Cdd:PLN02815 378 GGVRTGLQGET----------NVQGLYAAGEVACTGLHGANRLASNSLLEALVFARravqPSIDHMARALrdvsAAAAWA 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 476 KPLAADAGLDSLkfLDQIRtsqgpKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIgIRDRGLIWNTD 555
Cdd:PLN02815 448 RPVAPTALADSV--MDEIL-----EWTAVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWEAI-LFRHGWKPTMV 519
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 31076658 556 LVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDD 596
Cdd:PLN02815 520 GLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
58-641 |
2.17e-108 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 338.87 E-value: 2.17e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 58 IVVGAGGAGLRATFGLAEAGfntaCITKLFP----TRSHTVAAQGGINAALGNMTKDDWRW-HFYDTVKGSDWLGDQDAI 132
Cdd:PRK08641 7 IVVGGGLAGLMATIKAAEAG----VHVDLFSlvpvKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 133 HYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQsleygkggQAYRCAAVADRTGHSILHTLYGQSLKHNTNFFIEY 212
Cdd:PRK08641 83 KAMCEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 213 FA----MDLIM-EGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQ 287
Cdd:PRK08641 155 YEgwefLGAVLdDEGVCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 288 FHPTGIYGAGC--LITEGCRGEGGYLLNSK-GER--FMERYAPTAKDLASRDVVSRAM-TVEIREGRGVGPEkDHCYLQL 361
Cdd:PRK08641 235 IHPTAIPGDDKlrLMSESARGEGGRVWTYKdGKPwyFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGINGE-NMVYLDL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 362 SHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGiptrftgevLTIDENGKDKIvPGLYAAGEAAcVSVH 441
Cdd:PRK08641 314 SHKDPKELDIKLGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGG---------LWVDYDQMTNI-PGLFAAGECD-YSYH 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 442 GGNRLGANSLLDIV----VFGRACALHIK--DTLEPNTPHKPLAADAGLDSLKFlDQIRTSQGPKHTSEIRLDMQKTMQR 515
Cdd:PRK08641 383 GANRLGANSLLSAIyggmVAGPNAVEYIKglGKSADDVSSSVFEQALKQEQEKF-DNILSMDGTENAYVLHKELGEWMTD 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 516 DVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERD 595
Cdd:PRK08641 462 NVTVVRENDKLLETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERN 541
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 31076658 596 DKNWIKHTL-TWQHKTGDPVtLKYRAVtrttmdenEVKPVPPFKRVY 641
Cdd:PRK08641 542 DENWLKTTMaTYTPEGEEPE-FSYEDV--------DTSLIPPRKRDY 579
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
56-601 |
9.36e-107 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 332.34 E-value: 9.36e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGLAEAgFNTACITKLFPTRSHTVAAQGGINAALGnmTKDDWRWHFYDTVKGSDWLGDQDAIHYM 135
Cdd:PRK08071 5 DVIIIGSGIAALTVAKELCHE-YNVIIITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 136 TKEAPKAVLELEHFGVPFSRTKEGKIyqrAFGgqsLEygkGGQAYR--CAAVADRTGHSILHTLYGQSLKHNTnfFIEY- 212
Cdd:PRK08071 82 VEEGPKEIQELIENGMPFDGDETGPL---HLG---KE---GAHRKRriLHAGGDATGKNLLEHLLQELVPHVT--VVEQe 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 213 FAMDLIMEGGECRGVIAMNlEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTG 292
Cdd:PRK08071 151 MVIDLIIENGRCIGVLTKD-SEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTM 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 293 IYGAG-C--LITEGCRGEGGYLLNSKGERFMERYAPTaKDLASRDVVSRAMTVEIREGRGVgpekdhcYLQLSHLPAeiL 369
Cdd:PRK08071 230 LYANGrCvgLVSEAVRGEGAVLINEDGRRFMMGIHPL-ADLAPRDVVARAIHEELLSGEKV-------YLNISSIQN--F 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 370 KERLPGISETAAIfAGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGKDKIvPGLYAAGEAACVSVHGGNRLGAN 449
Cdd:PRK08071 300 EERFPTISALCEK-NGVDIETKRIPVVPGAHFLMGGVKT---------NLDGETSI-PGLYAIGEVACTGVHGANRLASN 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 450 SLLDIVVFGRACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQIRtsqgpkhtseirlDMQKTMQRDVSVFRMEETLQEG 529
Cdd:PRK08071 369 SLLEGLVFGKRAAEHILTKATKPRLNPFAEKEKKFIVLNHLPTKE-------------EIQEKMMKYVGIVRTEQSLSEA 435
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 31076658 530 VKNIARV-----DGTYKDIGIrdrgliwntdlvEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERddkNWIK 601
Cdd:PRK08071 436 KRWLEKYgvrnmILDHDALTN------------EEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR---NWRG 497
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
53-592 |
1.03e-104 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 326.37 E-value: 1.03e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 53 HTYDAIVVGAGGAGLRATFGLAEAGFnTACITKLFPTRSHTVAAQGGINAALGNmtKDDWRWHFYDTVKGSDWLGDQDAI 132
Cdd:TIGR00551 1 MEMDVVVIGSGAAGLSAALALAEKGR-VSVITKASVTDSNSYYAQGGIAAALAE--TDSIDAHVEDTLAAGAGICDEEAV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 133 HYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLKH-NTNFFIE 211
Cdd:TIGR00551 78 WFVVSDGSEAVQFLVSHGVTFDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARSEpNVNIIEG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 212 YFAMDLIMEGGECRGVIAMNLEDGSIHRFRAhkTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPT 291
Cdd:TIGR00551 150 EFALDLLIETGRCAGVFVQGSGTLETLHADA--VVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPT 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 292 GIYGAGC---LITEGCRGEGGYLLNSKGERFMERYAPTAkDLASRDVVSRAMTVEIREGrgvgpEKDHCYLQLSHLPAei 368
Cdd:TIGR00551 228 ALIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN-- 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 369 LKERLPGISETAaIFAGVDVTKEPIPVLPTVHYNMGGIptrftgevlTIDENGKDKIvPGLYAAGEAACVSVHGGNRLGA 448
Cdd:TIGR00551 300 FKDRFPTIYAVC-RGAGIDPEREPIPVAPGAHYTMGGI---------SVDAFGRTTI-PGLYAIGETACTGLHGANRLAS 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 449 NSLLDIVVFGRACALHIkdtlepnTPHKPLAADAglDSLKFLDQIRTsqgpkHTSEIRLDMQKTMQRDVSVF-------R 521
Cdd:TIGR00551 369 NSLLECLVFGLRAARTI-------SREPPYASRE--YQSGVWDEPRS-----ENPLDRHELQHKMSSLRSVLwnhagivR 434
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 31076658 522 MEETLQEGVKNIARvdgtykdigirdrgliWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYP 592
Cdd:TIGR00551 435 LEWSLREALRKLVE----------------IQDEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDYP 489
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
55-607 |
7.86e-104 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 325.85 E-value: 7.86e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 55 YDAIVVGAGGAGLRATFGLAEAgFNTACITKLFPTRSHTVAAQGGINAALGNMtkDDWRWHFYDTVKGSDWLGDQDAIHY 134
Cdd:PRK07395 10 FDVLVVGSGAAGLYAALCLPSH-LRVGLITKDTLKTSASDWAQGGIAAAIAPD--DSPKLHYEDTLKAGAGLCDPEAVRF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 135 MTKEAPKAVLELEHFGVPFSRTKEgkiyQRAFggqSLEygkggQAYRCAAV---ADRTGHSILHTLYGQSLKH-NTNFFI 210
Cdd:PRK07395 87 LVEQAPEAIASLVEMGVAFDRHGQ----HLAL---TLE-----AAHSRPRVlhaADTTGRAIVTTLTEQVLQRpNIEIIS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 211 EYFAMDLIMEG--GECRGVIAmnLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQF 288
Cdd:PRK07395 155 QALALSLWLEPetGRCQGISL--LYQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 289 HPTGIYGAGC---LITEGCRGEGGYLLNSKGERFMERYAPtAKDLASRDVVSRAMTVEIREgRGVGPEKDHCYLQLSHLP 365
Cdd:PRK07395 233 HPTALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIP 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 366 AEILKERLPGISETAAIFaGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGKDKIvPGLYAAGEAACVSVHGGNR 445
Cdd:PRK07395 311 AERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVT---------DLNNQTSI-PGLYAVGETASTGVHGANR 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 446 LGANSLLDIVVFGRACAlHIKDTLEPntphkPLAADAGLDSLKfLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEET 525
Cdd:PRK07395 380 LASNSLLECLVFAAQLA-QLELPIEP-----PASPDLPPISFI-IDASQWKNEQEQIQRIRQELPELVWQSAGICREADT 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 526 LQEGvknIARVDGTYKDI----------------GIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHARE 589
Cdd:PRK07395 453 LERA---IAQVEQWQQQLaalplsqflanlppgqTVSFNGPDAEQQLRLWAETRNLLDIAYLILKSALFRTESRGGHYRL 529
|
570 580
....*....|....*....|..
gi 31076658 590 DYPErDDKNWIKHTL----TWQ 607
Cdd:PRK07395 530 DYPQ-TDPAWQVHTLvqgeRWW 550
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
58-641 |
1.71e-102 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 324.11 E-value: 1.71e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 58 IVVGAGGAGLRATFGLAEAGFNTacitKLF-----PTRSHTVAAQGGINAALGNMTKDDWRW-HFYDTVKGSDWLGDQDA 131
Cdd:TIGR01811 2 IVVGTGLAGGMAAAKLAELGYHV----KLFsyvdaPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 132 IHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQsleygkggQAYRCAAVADRTGHSILHTLYGQSLKHNTNFFIE 211
Cdd:TIGR01811 78 VKRLAVASPEIIDLMDAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 212 YFA----MDLIM-EGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFV 286
Cdd:TIGR01811 150 KYEgwemLDIIVvDGNRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 287 QFHPTGIYGAGC------LITEGCRGEG--------------GYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIRE 346
Cdd:TIGR01811 230 QIHPTAIPVDGTwqsklrLMSESLRNDGriwtpkekndnrdpNTIPEDKRDYFLERRYPAFGNLVPRDIASRAIFQVCDA 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 347 GRGVGPEKDHCYLQLSH----LPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTRFtgEVLTidengk 422
Cdd:TIGR01811 310 GKGVGPGENAVYLDFSDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDY--DQMT------ 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 423 dkIVPGLYAAGEAAcVSVHGGNRLGANSLLDIVVFGR-ACALHIKDTLEPNTPHKPLAADAGL------DSLKFLDQIRT 495
Cdd:TIGR01811 382 --NIPGLFAAGECD-FSQHGANRLGANSLLSAIADGYfALPFTIPNYLGPELSSEDMPEDAPEfqaalaEEQERFDRLLK 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 496 SQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTY-KDIGIRDRGLIWNTDLVEALELRNLLTCAVQTAN 574
Cdd:TIGR01811 459 MRGDENPYYLHRELGEIMTENCGVSRNNEKLLKTDEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCL 538
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 31076658 575 AALNRKESRGAHAREDYP------ERDDKNWIKhTLTWQHK-TGDPVTLKYravtrttmDENEVKPVPPFKRVY 641
Cdd:TIGR01811 539 DALNRNESCGAHFRPEFPtpdgeaERNDEEFLK-VTAWEFQgENDAPEFHY--------EELDFELVPPRKRDY 603
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
56-595 |
1.02e-98 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 311.46 E-value: 1.02e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGLA--------EAGFNTACITKLfptrshtvaAQGGINAALGnmTKDDWRWHFYDTVKGSDWLG 127
Cdd:PRK07512 11 RPVIVGGGLAGLMAALKLAprpvvvlsPAPLGEGASSAW---------AQGGIAAALG--PDDSPALHAADTLAAGAGLC 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 128 DQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIyqrafgGQSLEYGKGgqAYRCAAVA-DRTGHSILHTLYGQSLKHNT 206
Cdd:PRK07512 80 DPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL------ALGLEAAHS--RRRIVHVGgDGAGAAIMRALIAAVRATPS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 207 NFFIE-YFAMDLIMEGGECRGVIAMNleDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEF 285
Cdd:PRK07512 152 ITVLEgAEARRLLVDDGAVAGVLAAT--AGGPVVLPARAVVLATGGIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 286 VQFHPTGIYGaGC----LITEGCRGEGGYLLNSKGERFMERYAPtAKDLASRDVVSRAMTVEIREGRGVgpekdhcYLQL 361
Cdd:PRK07512 230 VQFHPTAIDI-GRdpapLATEALRGEGAILINEDGERFMADIHP-GAELAPRDVVARAVFAEIAAGRGA-------FLDA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 362 SHLPAEILKERLPGISEtAAIFAGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGKDKIvPGLYAAGEAACVSVH 441
Cdd:PRK07512 301 RAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGIAV---------DADGRSSL-PGLWAAGEVASTGLH 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 442 GGNRLGANSLLDIVVFGRACALHIKDTlEPNTPHKPLAADAGldslkfldqirtSQGPKHTSEIRldmqKTMQRDVSVFR 521
Cdd:PRK07512 370 GANRLASNSLLEAVVFAARAAEDIAGT-PAAAAAPLSAAAAP------------ALDPADLALLR----PIMSRHVGVLR 432
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 31076658 522 MEETLQEGVKNIARVDGTYKDigirdrgliwntdlvealeLRNLLTCAVQTANAALNRKESRGAHAREDYPERD 595
Cdd:PRK07512 433 DADGLRRAIAALLPLEAGAGP-------------------AADPATVALLIAVAALAREESRGAHFRTDFPLTA 487
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
52-597 |
1.21e-94 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 301.45 E-value: 1.21e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 52 DHTYDAIVVGAGGAGLRATFGLAEAgFNTACITKLFPTRSHTVAAQGGINAALGnmTKDDWRWHFYDTVKGSDWLGDQDA 131
Cdd:PRK09077 6 EHQCDVLIIGSGAAGLSLALRLAEH-RRVAVLSKGPLSEGSTFYAQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 132 IHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAF----GGQSleygkggqAYRCAAVADRTGHSILHTLYGQSLKH-NT 206
Cdd:PRK09077 83 VRFIAENAREAVQWLIDQGVPFTTDEQANGEEGYHltreGGHS--------HRRILHAADATGKAVQTTLVERARNHpNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 207 NFFIEYFAMDLIME------GGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPL 280
Cdd:PRK09077 155 TVLERHNAIDLITSdklglpGRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRV 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 281 QDLEFVQFHPTGIYGAGC---LITEGCRGEGGYLLNSKGERFMERYAPTAkDLASRDVVSRAMTVEIREgRGVgpekDHC 357
Cdd:PRK09077 235 ANMEFNQFHPTCLYHPQArsfLITEALRGEGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGA----DCV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 358 YLQLSHLPAEILKERLPGISETAAIFaGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGKDKIvPGLYAAGEAAC 437
Cdd:PRK09077 309 YLDISHKPADFIRQHFPTIYERCLEL-GIDITKEPIPVVPAAHYTCGGVMV---------DLHGRTDL-DGLYAIGEVSY 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 438 VSVHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPHKPLAAdagldslkfLDQIRTSQGPK-----HT-SEIRLdmqk 511
Cdd:PRK09077 378 TGLHGANRMASNSLLECLVYGRSAAEDILSRLPKAPMPPTLPA---------WDESRVTDSDEevviqHNwHELRL---- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 512 TMQRDVSVFRMEETLQEGVKNIA----RVDGTYKDIGIrdrgliwNTDLveaLELRNLLTCAVQTANAALNRKESRGAHA 587
Cdd:PRK09077 445 FMWDYVGIVRTTKRLERALHRIRllqqEIDEYYANFRV-------SNNL---LELRNLVQVAELIVRCAMERKESRGLHY 514
|
570
....*....|
gi 31076658 588 REDYPERDDK 597
Cdd:PRK09077 515 TLDYPELLPE 524
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
53-605 |
6.72e-88 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 284.17 E-value: 6.72e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 53 HTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNmtKDDWRWHFYDTVKGSDWLGDQDAI 132
Cdd:PRK07804 15 DAADVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 133 HYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSleygkggqAYRCA-AVADRTGHSILHTLyGQSLKHNTNFFIE 211
Cdd:PRK07804 93 RSLVAEGPRAVRELVALGARFDESPDGRWALTREGGHS--------RRRIVhAGGDATGAEVQRAL-DAAVRADPLDIRE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 212 Y-FAMDLIM-EGGECRGVIAMNLEDGSIHRF---RAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFV 286
Cdd:PRK07804 164 HaLALDLLTdGTGAVAGVTLHVLGEGSPDGVgavHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 287 QFHPTGIY-GAGC-----LITEGCRGEGGYLLNSKGERFMERYAPTAkDLASRDVVSRAMTVEIREgRGVgpekDHCYLQ 360
Cdd:PRK07804 244 QFHPTVLFlGPAAggqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TGD----DHVYLD 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 361 LSHlpAEILKERLPGIseTAAIF-AGVDVTKEPIPVLPTVHYNMGGIPTrftgevltiDENGKDKiVPGLYAAGEAACVS 439
Cdd:PRK07804 318 ARG--IEGFARRFPTI--TASCRaAGIDPVRQPIPVAPAAHYSCGGVVT---------DVYGRTS-VPGLYAAGEVACTG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 440 VHGGNRLGANSLLDIVVFGRACALHIKDTLEPNTPHKPLAADAGldslkfldqirtsQGPKHTSEIRLDMQKTMQRDVSV 519
Cdd:PRK07804 384 VHGANRLASNSLLEGLVVGERAGAAAAAHAAAAGRPRATPAVGP-------------EPGLLPALDRAELQRAMTRGAGV 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 520 FRMEETLQEGVKNIARVDGTYKDIGIRDrgliwntdlveaLELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDkNW 599
Cdd:PRK07804 451 LRSAAGLARAADRLAAGAPARVVPGRAD------------WEDTNLTLVARALVAAALARTESRGCHWREDFPDTDD-EW 517
|
....*.
gi 31076658 600 IKHTLT 605
Cdd:PRK07804 518 ARSIVV 523
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
55-478 |
2.22e-77 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 253.07 E-value: 2.22e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 55 YDAIVVGAGGAGLRATFGLAEaGFNTACITKLFPTRSHTVAAQGGINAALGnmtKDDWRWHFYDTVKGSDWLGDQDAIHY 134
Cdd:PRK06175 5 ADVLIVGSGVAGLYSALNLRK-DLKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 135 MTKEAPKAVLELEHFGVPFSRTKEGKIYQRAfGGQSLEygkggqayRCAAVADRTGHSILHTLYGQSLKHNTNFFIE--Y 212
Cdd:PRK06175 81 LANESIENINKLIDMGLNFDKDEKELSYTKE-GAHSVN--------RIVHFKDNTGKKVEKILLKKVKKRKNITIIEncY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 213 FAmDLIMEGGECRGVIAmnLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTG 292
Cdd:PRK06175 152 LV-DIIENDNTCIGAIC--LKDNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 293 IYGAGC-----LITEGCRGEGGYLLNSKGERFMeryaptaKDLASRDVVSRAMTVEIREgrgvgPEKDHCYLQLSHLPAE 367
Cdd:PRK06175 229 FYEETIegkkfLISESVRGEGGKLLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKD 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 368 ILKERLPGISETaAIFAGVDVTKEPIPVLPTVHYNMGGIptrftgevlTIDENGKDKIvPGLYAAGEAACVSVHGGNRLG 447
Cdd:PRK06175 297 FLKNRFPTIYEE-CLKRGIDITKDAIPVSPAQHYFMGGI---------KVDLNSKTSM-KNLYAFGEVSCTGVHGANRLA 365
|
410 420 430
....*....|....*....|....*....|....
gi 31076658 448 ANSLLDIVVFGRACALHIK---DTLEPNTPHKPL 478
Cdd:PRK06175 366 SNSLLEGLVFSKRGAEKINseiDNIKLNITKVYT 399
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
506-641 |
4.75e-67 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 215.00 E-value: 4.75e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 506 RLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGA 585
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 31076658 586 HAREDYPERDDKNWIKHTLTWQHKTGDPVTLKYRAVTRTTMdenevkpVPPFKRVY 641
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDGGPRLEYEPVTFTTL-------FPPKERSY 129
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
55-625 |
1.33e-63 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 221.61 E-value: 1.33e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 55 YDAIVVGAGGAGLRATFGLAEAGFNTACITklF---PTRSHTVAAQGGINAALGNMTKDD--WRwHFYDTVKGSDWLGDQ 129
Cdd:PRK07573 36 FDVIVVGTGLAGASAAATLGELGYNVKVFC--YqdsPRRAHSIAAQGGINAAKNYQNDGDsvYR-LFYDTVKGGDFRARE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 130 DAIHYMTKEAPKAVLELEHFGVPFSRTKEGKIYQRAFGGQSLE---YGKGgqayrcaavadRTGHSILHTLYgQSLKH-- 204
Cdd:PRK07573 113 ANVYRLAEVSVNIIDQCVAQGVPFAREYGGLLANRSFGGAQVSrtfYARG-----------QTGQQLLLGAY-QALSRqi 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 205 ---NTNFFIEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQ 281
Cdd:PRK07573 181 aagTVKMYTRTEMLDLVVVDGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNATAIWRAHKKGAYFA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 282 DLEFVQFHPTGIYGAG------CLITEGCRGEGG-YLLNSKG-----------ER--FMERYAPTAKDLASRDVVSRAMT 341
Cdd:PRK07573 261 NPCFTQIHPTCIPVSGdyqsklTLMSESLRNDGRiWVPKKKGdkrkpndipeeERdyYLERRYPAFGNLVPRDVASRAAK 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 342 VEIREGRGVGPEKDHCYLQLS----HLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGiptrftgevLTI 417
Cdd:PRK07573 341 ERCDAGRGVGPTGLGVYLDFAdaikRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGG---------LWV 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 418 DENGKDKIvPGLYAAGEAACvSVHGGNRLGANSLLdivvfgRACA-------LHIKDTLEPNTPHKPLAAD------AGL 484
Cdd:PRK07573 412 DYNLMSTI-PGLFVIGEANF-SDHGANRLGASALM------QGLAdgyfvlpYTIGNYLADTIGTPKVSTDhpefkeAEA 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 485 DSLKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARV-DGTYKDIGIRDRGLIWNTDLVEALELR 563
Cdd:PRK07573 484 EVQDRIDRLLNIKGKRTVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALrEEFWKNVRVPGSADELNQELEKAGRVA 563
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 31076658 564 NLLTCAVQTANAALNRKESRGAHAREDY--PE----RDDKNWiKHTLTWQHK--TGDPV----TLKYRAVTRTT 625
Cdd:PRK07573 564 DFLELGELMCRDALHREESCGGHFREEHqtEDgealRDDENF-AYVAAWEYKgdGKEPVlhkePLEFENVKLAQ 636
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
59-592 |
2.56e-59 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 205.81 E-value: 2.56e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 59 VVGAGGAGLRATFGLAEAGFNTACITKLfPTRSHTVAAQGGInaALGNMTKDDWRWHFYDTVKGSDWLGDQDAIHYMTKE 138
Cdd:PRK08401 6 IVGGGLAGLTAAISLAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 139 APKAVLELEHFGVPFSrtkegkiyqrafgGQSLEygkGGQAY-RCAAVADRTGHSILHTLYGQSLKHNTNFfIEYFAMDL 217
Cdd:PRK08401 83 SSEAYDFLTSLGLEFE-------------GNELE---GGHSFpRVFTIKNETGKHIIKILYKHARELGVNF-IRGFAEEL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 218 IMEGGECRGVIAmnleDGSIHRFRAhkTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAG 297
Cdd:PRK08401 146 AIKNGKAYGVFL----DGELLKFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKR 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 298 C--LITEGCRGEGGYLLNSKGERFMeryaptaKDLASRDVVSRAMTVEIREGRGVgpekdhcYLQLSHLpaEILKERLPG 375
Cdd:PRK08401 220 GtyLISEAVRGAGAKLVTGDGERFV-------NELETRDIVARAIYRKMQEGKGV-------FLDATGI--EDFKRRFPQ 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 376 ISeTAAIFAGVDVTKEPIPVLPTVHYNMGGIptrftgevlTIDENGKDKIvPGLYAAGEAACVSVHGGNRLGANSLLDIV 455
Cdd:PRK08401 284 IY-AFLRKEGIDPSRDLIPVTPIAHYTIGGI---------SVDTFYRTGI-KNLYAIGEAASNGFHGANRLASNSLLECI 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 456 VFGracaLHIKDTLEPNTPHKPLAADA--GLDSLKFLDQIRtsqgpkhtsEIrldmqktMQRDVSVFRMEETLQEGVKNI 533
Cdd:PRK08401 353 VSG----LEVARTISRERPKLREVKEPpyHGYELGDVDSIR---------EI-------LWNHAGIVRSEESLREGLKKL 412
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 31076658 534 ARV--DGTYKdigirdrgliwntdlveaLELRNLLTCavqtanaALNRKESRGAHAREDYP 592
Cdd:PRK08401 413 EGIeaDPRLK------------------LLAKGVLEC-------ALAREESRGAHYREDFP 448
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
56-459 |
4.74e-45 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 166.36 E-value: 4.74e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGLAEAGF-NTACITKLFPTRSHTVAAQGGINAALGNMTK-----DDWRWHFYDTVKGSDWLGDQ 129
Cdd:TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAaNVVLLEKMPVIGGNSAIAAGGMNAAGTDQQKalgieDSPELFIKDTLKGGRGINDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 130 DAIHYMTKEAPKAVlELEHFGVPFsrtKEGKIYQraFGGQSLEygkggQAYRCAAVAdRTGHSILHTLYGQSLKHNTNFF 209
Cdd:TIGR01813 81 ELVRILAEESKDAV-DWLQDGVGA---RLDDLIQ--LGGHSVP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 210 IEYFAMDLIMEG-GECRGVIAMNlEDGSIHRFRAHKTILATGGYGR------AY------FSCTSAHTCTGDGNAMVSRA 276
Cdd:TIGR01813 149 LNSKVEDLIQDDqGSVVGVVVKG-KGKGIYIKAAKAVVLATGGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEKI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 277 GLPLQDLEFVQFHPTG-IYGAGCLITEGCRGEGGYLLNSKGERFMERYAP-----------TAKD---LASRDVVSRAMT 341
Cdd:TIGR01813 228 GAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTGERFMNELATrdkvsdailaqPGKDaylIFDDDVYKKAKM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 342 VEIREGRGVGPEKDHCYlQLS---HLPAEILKERLPGISETAA----------IFAGVDVTKEP---IPVLPTVHYNMGG 405
Cdd:TIGR01813 308 VDNYYRLGVAYKGDSLE-ELAkqfGIPAAALKQTIKDYNGYVAsgkdtpfgrpMDMPTDLSKAPyyaIKVTPGVHHTMGG 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 31076658 406 IPTRFTGEVltIDENGkdKIVPGLYAAGEAACvSVHGGNRLGANSLLDIVVFGR 459
Cdd:TIGR01813 387 VKINTKAEV--LDANG--KPIPGLFAAGEVTG-GVHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
21-459 |
6.08e-39 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 150.37 E-value: 6.08e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 21 STSSTLKKIASSQPLRAKQVSTSESVKYPVID-----HTYDAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVA 95
Cdd:PRK06481 23 GSNTTSKSDSSSSKESEKTEVTSGASKTSYTDpselkDKYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMK 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 96 AQGGINAALGNMTK----DDWRWHFYD-TVKGSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKegkiyqrAFGGQS 170
Cdd:PRK06481 103 ASSGMNASETKFQKaqgiADSNDKFYEeTLKGGGGTNDKALLRYFVDNSASAIDWLDSMGIKLDNLT-------ITGGMS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 171 LEygkggqayRCAAVADRT--GHSILHTLYGQSLKHNTNFFIEYFAMDLIMEGGECRGViAMNLEDGSIHRFRAHKTILA 248
Cdd:PRK06481 176 EK--------RTHRPHDGSavGGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGV-KVKINGKETKTISSKAVVVT 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 249 TGGYGR------------AYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGYLLNSKG 316
Cdd:PRK06481 247 TGGFGAnkdmiakyrpdlKGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKG 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 317 ERFM-----------------ERYAPTAKDLASRDvvsRAMTVEIREGRGVGPEKDhcylQLSHL------PAEILKERL 373
Cdd:PRK06481 327 KRFGneldtrdkvsaainklpEKYAYVVFDSGVKD---RVKAIAQYEEKGFVEEGK----TIDELakkinvPAETLTKTL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 374 PGISETA-----AIF---AGVD--VTKEP---IPVLPTVHYNMGGIPTRFTGEVLTIDEngkdKIVPGLYAAGEAACvSV 440
Cdd:PRK06481 400 DTWNKAVknkkdEAFgrtTGMDndLSTGPyyaIKIAPGIHYTMGGVKINTNTEVLKKDG----SPITGLYAAGEVTG-GL 474
|
490
....*....|....*....
gi 31076658 441 HGGNRLGANSLLDIVVFGR 459
Cdd:PRK06481 475 HGENRIGGNSVADIIIFGR 493
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
53-621 |
3.94e-29 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 122.08 E-value: 3.94e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 53 HTYDAIVVGAGGAGLRATFGLAEAgfNTAC----ITKLFPTRSHTVA-AQGGINAAL--GNMTKDDWrwhfydtVK---- 121
Cdd:PRK08275 8 VETDILVIGGGTAGPMAAIKAKER--NPALrvllLEKANVKRSGAISmGMDGLNNAVipGHATPEQY-------TKeiti 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 122 GSDWLGDQDAIHYMTKEAPKAVLELEHFGVPFSRTKEG-----KIYQraFGGQSLEYgkggqayrcaavadRTGHSILHT 196
Cdd:PRK08275 79 ANDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGdyavkKVHH--MGSYVLPM--------------PEGHDIKKV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 197 LYGQSLKHNTNFFIEYFAMDLIMEG-GECRGVIAMNLEDGSIHRFRAHKTILATGGYGR------AYFSCTSAH-TCTGD 268
Cdd:PRK08275 143 LYRQLKRARVLITNRIMATRLLTDAdGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasGYLFGTYENpTNAGD 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 269 GNAMVSRAGLPLQDLEFVQFHP--TGIYGAGCLITEGcrGEGGYLLNSKGERFMERYAPtakdlasrdvvSRAMTVEI-R 345
Cdd:PRK08275 223 GYAMAYHAGAELANLECFQINPliKDYNGPACAYVTG--PLGGYTANAKGERFIECDYW-----------SGQMMWEFyQ 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 346 E-GRGVGPekdhCYLQLSHLPAEIlkerlpgISETAAIF--------------AGVDVTKEPIpvlpTVHYNMGGIPTRF 410
Cdd:PRK08275 290 ElQSGNGP----VFLKLDHLAEET-------IQTIETILhtnerpsrgrfhegRGTDYRQQMV----EMHISEIGFCSGH 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 411 TGEVLTIDENGKDKiVPGLYAAGEAACVsvhggnrlGANSLLDIVVFGRACALHIKDTLEpNTPH--------------- 475
Cdd:PRK08275 355 SASGVWVNEKAETT-VPGLYAAGDMASV--------PHNYMLGAFTYGWFAGENAAEYVA-GRDLpevdaaqveaerarv 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 476 -KPLAADAGLDSLKFLDQIRTS-----QGPKHTSEIRLdmqktmqrdvsvfrmeetlqeGVKNIARVDGTYKDIGIRDrg 549
Cdd:PRK08275 425 lAPLHREDGLPPAQVEYKLRRLvndylQPPKVTRKMEI---------------------GLQRFAEIREDLERIKARD-- 481
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 31076658 550 liWNtDLVEALELRNLLTCAVQTANAALNRKESRGA--HAREDYPERDDKNWIKHTLTWQHKTGDPVTLKyRAV 621
Cdd:PRK08275 482 --PH-ELMRALEVSSIRDCAEMAARASLFRTESRWGlyHYRVDFPERNDAEWFCHTHLRKDEDGRMVSFK-RPV 551
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
56-602 |
7.22e-25 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 110.32 E-value: 7.22e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 56 DAIVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVA-AQGGINAAL--GNMTKDDWrwhFYDTVKGSDWLGDQDAI 132
Cdd:PRK13800 15 DVLVIGGGTAGTMAALTAAEHGANVLLLEKAHVRHSGALAmGMDGVNNAVipGKAEPEDY---VAEITRANDGIVNQRTV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 133 HYMTKEAPKAVLELEHFGVPFSRTKEGkiyqrafggqslEYgkggqAYRcaaVADRTGHSILHTLYGQSLKH-------- 204
Cdd:PRK13800 92 YQTATRGFAMVQRLERYGVKFEKDEHG------------EY-----AVR---RVHRSGSYVLPMPEGKDVKKalyrvlrq 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 205 ---NTNFFIEYFAMD--LIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGGYGR------AYFSCTSAH-TCTGDGNAM 272
Cdd:PRK13800 152 rsmRERIRIENRLMPvrVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRlglpasGYLYGTYENpTNAGDGYSM 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 273 VSRAGLPLQDLEFVQFHP--TGIYGAGCLITegCRGEGGYLLNSKGERFMERyaptakdlasrDVVSRAMTVEIRegRGV 350
Cdd:PRK13800 232 AYHAGAELSGIECFQINPliKDYNGPACAYV--ANPFGGYQVNAQGERFVDS-----------DYWSGQMMAEVK--REI 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 351 GPEKDHCYLQLSHLPAEILKErLPGISETaaifagvdvTKEPipVLPTVHYNMG---------------GIPTRFTGEVL 415
Cdd:PRK13800 297 ESARGPIYLKVSHLPEETLSA-LESILHT---------TERP--TRGTFHANRGhdyrthdiemhiseiGLCSGHSASGV 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 416 TIDENGKdKIVPGLYAAGEAACVSvHggnrlgaNSLLDIVVFGRACALHIKDTLEPNTPHKPLAADAGLDSLKFLDQ-IR 494
Cdd:PRK13800 365 WVDEHAR-TTVPGLYAAGDLACVP-H-------NYMIGAFVFGDLAGAHAAGTLAEVPAPGELPADQLAEAHELIYRpLR 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 495 TSQGPKHtSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIRDrgliwNTDLVEALELRNLLTCAVQTAN 574
Cdd:PRK13800 436 HPDGPPQ-PQVEYKLRRFVNDYVAPPKTAAKLSIAVETFERMAAEIAGMGART-----PHELMRCAEVSFIRDCAEMAAR 509
|
570 580 590
....*....|....*....|....*....|
gi 31076658 575 AALNRKESRGA--HAREDYPERDDKNWIKH 602
Cdd:PRK13800 510 SSLTRTESRWGlyHDRADLPERDDASWGYH 539
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
58-459 |
1.73e-22 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 102.94 E-value: 1.73e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 58 IVVGAGGAGLRATFGLAEAGFNTACITKLFPTRSHTVAAQGGINAaLGNMTK------DDWRWHFYDTVK-GSDWLGDQD 130
Cdd:PTZ00306 413 IVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGGNSAKATSGING-WGTRAQakqdvlDGGKFFERDTHLsGKGGHCDPG 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 131 AIHYMTKEAPKAVLELEHFGVPFSrtkegKIYQraFGGQSLEygkggqayRCAAVADRT-------GHSILHTLYGQ--- 200
Cdd:PTZ00306 492 LVKTLSVKSADAISWLSSLGVPLT-----VLSQ--LGGASRK--------RCHRAPDKKdgtpvpiGFTIMRTLEDHirt 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 201 SLKHNTNFFIEYFAMDLIMEGGE---------CRGV--IAMNLEDGSIHRFRAHKTILATGGYG---------RAY---- 256
Cdd:PTZ00306 557 KLSGRVTIMTETTVTSLLSESSArpdgvreirVTGVryKQASDASGQVMDLLADAVILATGGFSndhtpnsllREYapql 636
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 257 --FSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYG-------AGCLITEGCRGEGGYLLNSKGERFMeryapta 327
Cdd:PTZ00306 637 sgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkdpsnrTKYLGPEALRGSGGVLLNKNGERFV------- 709
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 328 KDLASRDVVSRAMTVEIREGRGVGPEKdHCYLQLSHLPAEI--------------LKERLPGISETAAIFaGVDV----- 388
Cdd:PTZ00306 710 NELDLRSVVSQAIIAQGNEYPGSGGSK-FAYCVLNEAAAKLfgknslgfywkrlgLFQRVDDVKGLAKLI-GCPVenlhr 787
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 389 ----------TKEPIP---------------------VLPTVHYNMGGIPTRFTGEVLTIDEN----GKDKIVPGLYAAG 433
Cdd:PTZ00306 788 tletyerlstKKVACPltgkvvfpcvvgtqgpyyvafVTPSIHYTMGGCLISPSAEMQMEDNSvnifEDRRPILGLFGAG 867
|
490 500
....*....|....*....|....*.
gi 31076658 434 EAACvSVHGGNRLGANSLLDIVVFGR 459
Cdd:PTZ00306 868 EVTG-GVHGGNRLGGNSLLECVVFGK 892
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
47-603 |
7.66e-19 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 90.37 E-value: 7.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 47 KYPVIDHTYDAIVVGAGGAGLRATFGLAE--AGFNTACITKLFPTRSHTVAaQG--GINAALG-NMTKDDwrwhFYDTVK 121
Cdd:PRK06854 4 NPEVVEVDTDILIIGGGMAGCGAAFEAKEwaPDLKVLIVEKANIKRSGAVA-QGlsAINAYIGeGETPED----YVRYVR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 122 GsDWLG--DQDAIHYMTKEAPKAVLELEHFGVPFSRTKEGKiYQRAfggqsleyGK-----GGQAYRCAaVADRTghsil 194
Cdd:PRK06854 79 K-DLMGivREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YVRR--------GRwqimiNGESYKPI-VAEAA----- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 195 htlygqSLKHNTNFFIEYFAMDLIMEGGECRGVIAMNLEDGSIHRFRAHKTILATGG----Y---------GRAYFSCTS 261
Cdd:PRK06854 143 ------KKALGDNVLNRVFITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiYrprspgegrGRMWYPPFN 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 262 ahtcTGDGNAMVSRAGLPLQDLE--FVQFH------PTGIYGAGClitegcrgeGGYLLNSKGERFMERYAPTAKDLASR 333
Cdd:PRK06854 217 ----TGSGYAMGIRAGAEMTTFEnrFIPLRfkdgygPVGAWFLLF---------KAKAVNALGEEYEAKNAAELKKYVPY 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 334 DVVSR--------AMTVEIREGRgvGPekdhCYL------QLSHLPAEILKERL---PGIsetAAIFAGVDV--TKEPIP 394
Cdd:PRK06854 284 ADYKPiptclrnyATVEENKAGR--GP----IYMdteealQDKHLESELWEDFLdmtPGQ---ALLWAAQNIepEEENSE 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 395 VLPTVHYNMGGIPTRfTG------EVLTIDENGKDK----IVPGLYAAGEAACVSVHggnRLGANSLLDivvfGRACALH 464
Cdd:PRK06854 355 IMGTEPYIVGSHSGA-SGywvsgpEDWVPEEYKWGYnrmtTVEGLFAAGDVVGGSPH---KFSSGSFAE----GRIAAKA 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 465 IKDTLEPNTPHKPLAADAGLDSLK-----FLDQIRTSQGPKHTSEIRLD----------MQKTMqrD-----VSVFRM-- 522
Cdd:PRK06854 427 AVRYILDNKDEKPEIDDDQIEELKkeiyaPLERYEEFKDYSTDPDVNPNyispeqleerLQKIM--DeyaggISTNYTtn 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 31076658 523 EETLQEGVKNIARVDGTYKDIGIRDrgliwNTDLVEALELRN-LLTCAVQTANaALNRKESR--GAHAREDYPERDDKNW 599
Cdd:PRK06854 505 EKLLEIALELLEMLEEDSEKLAARD-----LHELMRCWELKHrLLVAEAHIRH-LLFRKETRwpGYYERADYPGKDDENW 578
|
....
gi 31076658 600 IKHT 603
Cdd:PRK06854 579 KCFV 582
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
54-83 |
7.00e-04 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 42.20 E-value: 7.00e-04
10 20 30
....*....|....*....|....*....|
gi 31076658 54 TYDAIVVGAGGAGLRATFGLAEAGFNTACI 83
Cdd:PRK07494 7 HTDIAVIGGGPAGLAAAIALARAGASVALV 36
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
52-83 |
5.89e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 39.68 E-value: 5.89e-03
10 20 30
....*....|....*....|....*....|..
gi 31076658 52 DHTYDAIVVGAGGAGLRATFGLAEAGFNTACI 83
Cdd:COG1249 1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALV 32
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
55-83 |
8.89e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 39.03 E-value: 8.89e-03
10 20
....*....|....*....|....*....
gi 31076658 55 YDAIVVGAGGAGLRATFGLAEAGFNTACI 83
Cdd:PRK06370 6 YDAIVIGAGQAGPPLAARAAGLGMKVALI 34
|
|
| |
