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ribosomal protein S5, partial [Salassa sp. NW-2010]
40S ribosomal protein S5( domain architecture ID 10201903)
40S ribosomal protein S5
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
uS7_Eukaryote | cd14867 | Eukaryota homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an ... |
19-199 | 4.18e-97 | ||||
Eukaryota homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an important part of the translation process which is universally present in the small subunit of prokaryotic and eukaryotic ribosomes. Eukaryotic RPS7 (also named RPS5) have variable N-terminal regions that affect the efficiency of initiation translation process by impacting small ribosomal subunit to function. The ribosome small subunit is one of the two subunits of ribosome organelles that use mRNA as a template for protein synthesis in a process called translation. The small subunits of bacteria and eukaryotes have the same shape of head, body, platform, beak, and shoulder. RPS7 is located at the head of the small subunit which is a primary ribosomal RNA (rRNA) binding protein that assists in rRNA folding and the binding of other proteins during small subunit assembly in all species. RPS7 is also involved in the formation of the mRNA exit channel at the interface of the large and small subunits. Some ribosomal proteins have extra ribosomal functions in cell differentiation and apoptosis. : Pssm-ID: 271246 Cd Length: 185 Bit Score: 279.44 E-value: 4.18e-97
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Name | Accession | Description | Interval | E-value | ||||
uS7_Eukaryote | cd14867 | Eukaryota homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an ... |
19-199 | 4.18e-97 | ||||
Eukaryota homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an important part of the translation process which is universally present in the small subunit of prokaryotic and eukaryotic ribosomes. Eukaryotic RPS7 (also named RPS5) have variable N-terminal regions that affect the efficiency of initiation translation process by impacting small ribosomal subunit to function. The ribosome small subunit is one of the two subunits of ribosome organelles that use mRNA as a template for protein synthesis in a process called translation. The small subunits of bacteria and eukaryotes have the same shape of head, body, platform, beak, and shoulder. RPS7 is located at the head of the small subunit which is a primary ribosomal RNA (rRNA) binding protein that assists in rRNA folding and the binding of other proteins during small subunit assembly in all species. RPS7 is also involved in the formation of the mRNA exit channel at the interface of the large and small subunits. Some ribosomal proteins have extra ribosomal functions in cell differentiation and apoptosis. Pssm-ID: 271246 Cd Length: 185 Bit Score: 279.44 E-value: 4.18e-97
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PTZ00091 | PTZ00091 | 40S ribosomal protein S5; Provisional |
17-199 | 7.18e-89 | ||||
40S ribosomal protein S5; Provisional Pssm-ID: 185439 Cd Length: 193 Bit Score: 258.93 E-value: 7.18e-89
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uS7_euk_arch | TIGR01028 | ribosomal protein uS7, eukaryotic/archaeal; This model describes the members from the ... |
17-199 | 4.23e-79 | ||||
ribosomal protein uS7, eukaryotic/archaeal; This model describes the members from the eukaryotic cytosol and the Archaea of the family that includes ribosomal protein uS7 (previously S5 in yeast and human). A separate model describes bacterial and organellar S7. [Protein synthesis, Ribosomal proteins: synthesis and modification] Pssm-ID: 273402 Cd Length: 186 Bit Score: 233.89 E-value: 4.23e-79
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Ribosomal_S7 | pfam00177 | Ribosomal protein S7p/S5e; This family contains ribosomal protein S7 from prokaryotes and S5 ... |
112-199 | 1.06e-31 | ||||
Ribosomal protein S7p/S5e; This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Pssm-ID: 425505 Cd Length: 132 Bit Score: 111.70 E-value: 1.06e-31
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RpsG | COG0049 | Ribosomal protein S7 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S7 ... |
140-199 | 4.10e-05 | ||||
Ribosomal protein S7 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S7 is part of the Pathway/BioSystem: Ribosome 30S subunit Pssm-ID: 439819 Cd Length: 156 Bit Score: 41.97 E-value: 4.10e-05
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Name | Accession | Description | Interval | E-value | ||||
uS7_Eukaryote | cd14867 | Eukaryota homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an ... |
19-199 | 4.18e-97 | ||||
Eukaryota homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an important part of the translation process which is universally present in the small subunit of prokaryotic and eukaryotic ribosomes. Eukaryotic RPS7 (also named RPS5) have variable N-terminal regions that affect the efficiency of initiation translation process by impacting small ribosomal subunit to function. The ribosome small subunit is one of the two subunits of ribosome organelles that use mRNA as a template for protein synthesis in a process called translation. The small subunits of bacteria and eukaryotes have the same shape of head, body, platform, beak, and shoulder. RPS7 is located at the head of the small subunit which is a primary ribosomal RNA (rRNA) binding protein that assists in rRNA folding and the binding of other proteins during small subunit assembly in all species. RPS7 is also involved in the formation of the mRNA exit channel at the interface of the large and small subunits. Some ribosomal proteins have extra ribosomal functions in cell differentiation and apoptosis. Pssm-ID: 271246 Cd Length: 185 Bit Score: 279.44 E-value: 4.18e-97
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PTZ00091 | PTZ00091 | 40S ribosomal protein S5; Provisional |
17-199 | 7.18e-89 | ||||
40S ribosomal protein S5; Provisional Pssm-ID: 185439 Cd Length: 193 Bit Score: 258.93 E-value: 7.18e-89
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uS7_euk_arch | TIGR01028 | ribosomal protein uS7, eukaryotic/archaeal; This model describes the members from the ... |
17-199 | 4.23e-79 | ||||
ribosomal protein uS7, eukaryotic/archaeal; This model describes the members from the eukaryotic cytosol and the Archaea of the family that includes ribosomal protein uS7 (previously S5 in yeast and human). A separate model describes bacterial and organellar S7. [Protein synthesis, Ribosomal proteins: synthesis and modification] Pssm-ID: 273402 Cd Length: 186 Bit Score: 233.89 E-value: 4.23e-79
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PRK04027 | PRK04027 | 30S ribosomal protein S7P; Reviewed |
13-199 | 5.34e-63 | ||||
30S ribosomal protein S7P; Reviewed Pssm-ID: 235204 Cd Length: 195 Bit Score: 193.58 E-value: 5.34e-63
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Ribosomal_S7 | pfam00177 | Ribosomal protein S7p/S5e; This family contains ribosomal protein S7 from prokaryotes and S5 ... |
112-199 | 1.06e-31 | ||||
Ribosomal protein S7p/S5e; This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Pssm-ID: 425505 Cd Length: 132 Bit Score: 111.70 E-value: 1.06e-31
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uS7_Bacteria | cd14869 | Bacterial homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an ... |
126-199 | 2.67e-07 | ||||
Bacterial homolog of Ribosomal Protein S7; uS7, also known as Ribosomal protein (RP)S7, is an important part of the translation process which is universally present in the small subunit of prokaryotic and eukaryotic ribosomes. Prokaryotic RPS7 is lacking the variable N-terminal region of eukaryotic RPS7. The ribosome small subunit is one of the two subunits of ribosome organelles that use mRNA as a template for protein synthesis in a process called translation. The small subunits of bacteria and eukaryotes have the same shape of head, body, platform, beak, and shoulder. RPS7 is located at the head of the small subunit which is a primary ribosomal RNA (rRNA) binding protein that assists in rRNA folding and the binding of other proteins during small subunit assembly in all species. RPS7 is also involved in the formation of the mRNA exit channel at the interface of the large and small subunits. Some ribosomal proteins have extra ribosomal functions in cell differentiation and apoptosis. Pssm-ID: 271248 Cd Length: 138 Bit Score: 47.83 E-value: 2.67e-07
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PRK05302 | PRK05302 | 30S ribosomal protein S7; Validated |
140-199 | 1.91e-05 | ||||
30S ribosomal protein S7; Validated Pssm-ID: 235398 Cd Length: 156 Bit Score: 42.78 E-value: 1.91e-05
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RpsG | COG0049 | Ribosomal protein S7 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S7 ... |
140-199 | 4.10e-05 | ||||
Ribosomal protein S7 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S7 is part of the Pathway/BioSystem: Ribosome 30S subunit Pssm-ID: 439819 Cd Length: 156 Bit Score: 41.97 E-value: 4.10e-05
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Blast search parameters | ||||
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