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Conserved domains on  [gi|307136262|gb|ADN34090|]
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hypothetical protein [Cucumis melo subsp. melo]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 55-753 8.12e-67

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 238.98  E-value: 8.12e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  55 STCYDAYPKTATWNQTNkDCCSWDGVKCDEEDEghtiVVGLDLSCSWLSGVLHPnnTLFTLSRLQTLNLSHNLLLSKFsP 134
Cdd:PLN00113  39 SSINDPLKYLSNWNSSA-DVCLWQGITCNNSSR----VVSIDLSGKNISGKISS--AIFRLPYIQTINLSNNQLSGPI-P 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 135 Q--FGNFKNLRHLDLSSSYFMGDVPLeiSYLSNLVSLDLSSNYLSfsnvvmnqlvhnltnlrdlalsdvflldispssft 212
Cdd:PLN00113 111 DdiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS----------------------------------- 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 213 nlslslasltlsscglsGNFPPHIMSLPNLQVLQLENNYeLEGQLPMS--NWSeSLELLNLFSTKFSGEIPYSIGTAKSL 290
Cdd:PLN00113 154 -----------------GEIPNDIGSFSSLKVLDLGGNV-LVGKIPNSltNLT-SLEFLTLASNQLVGQIPRELGQMKSL 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 291 RSLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSN 370
Cdd:PLN00113 215 KWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 371 LFSGPLPTYVAsdRLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFI-RDF-KSNSLEFLDLSANNLQGGI 448
Cdd:PLN00113 295 SLSGEIPELVI--QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIpKNLgKHNNLTVLDLSTNNLTGEI 372

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 449 PESIYKQVNLTYLALGSNNLSgvlnldmllrvqsrlvsldvsynkqlmvqstnvsfvnnnlvhiemgsctlGKVPYFLRY 528
Cdd:PLN00113 373 PEGLCSSGNLFKLILFSNSLE--------------------------------------------------GEIPKSLGA 402

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 529 QKKLEHLDLSNTQIQGGIPKWFSELSALNHLNLSHNSLSSGIeilltlpnlgdlflDSNLFKLPfpmlpsSIKQFTASNN 608
Cdd:PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI--------------NSRKWDMP------SLQMLSLARN 462

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 609 RFSGNIhPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELKRNNFSGSIP--IPPPLILV-YTASENHFTGEIPS 685
Cdd:PLN00113 463 KFFGGL-PDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPdeLSSCKKLVsLDLSHNQLSGQIPA 541

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 307136262 686 SICHAKFLAVLSLSNNHLSGTIPPCLANLSSLVVLEMKNNHFSGSVPmlfPTGSqlrSLDLNGNEIEG 753
Cdd:PLN00113 542 SFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP---STGA---FLAINASAVAG 603
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 55-753 8.12e-67

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 238.98  E-value: 8.12e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  55 STCYDAYPKTATWNQTNkDCCSWDGVKCDEEDEghtiVVGLDLSCSWLSGVLHPnnTLFTLSRLQTLNLSHNLLLSKFsP 134
Cdd:PLN00113  39 SSINDPLKYLSNWNSSA-DVCLWQGITCNNSSR----VVSIDLSGKNISGKISS--AIFRLPYIQTINLSNNQLSGPI-P 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 135 Q--FGNFKNLRHLDLSSSYFMGDVPLeiSYLSNLVSLDLSSNYLSfsnvvmnqlvhnltnlrdlalsdvflldispssft 212
Cdd:PLN00113 111 DdiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS----------------------------------- 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 213 nlslslasltlsscglsGNFPPHIMSLPNLQVLQLENNYeLEGQLPMS--NWSeSLELLNLFSTKFSGEIPYSIGTAKSL 290
Cdd:PLN00113 154 -----------------GEIPNDIGSFSSLKVLDLGGNV-LVGKIPNSltNLT-SLEFLTLASNQLVGQIPRELGQMKSL 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 291 RSLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSN 370
Cdd:PLN00113 215 KWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 371 LFSGPLPTYVAsdRLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFI-RDF-KSNSLEFLDLSANNLQGGI 448
Cdd:PLN00113 295 SLSGEIPELVI--QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIpKNLgKHNNLTVLDLSTNNLTGEI 372

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 449 PESIYKQVNLTYLALGSNNLSgvlnldmllrvqsrlvsldvsynkqlmvqstnvsfvnnnlvhiemgsctlGKVPYFLRY 528
Cdd:PLN00113 373 PEGLCSSGNLFKLILFSNSLE--------------------------------------------------GEIPKSLGA 402

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 529 QKKLEHLDLSNTQIQGGIPKWFSELSALNHLNLSHNSLSSGIeilltlpnlgdlflDSNLFKLPfpmlpsSIKQFTASNN 608
Cdd:PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI--------------NSRKWDMP------SLQMLSLARN 462

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 609 RFSGNIhPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELKRNNFSGSIP--IPPPLILV-YTASENHFTGEIPS 685
Cdd:PLN00113 463 KFFGGL-PDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPdeLSSCKKLVsLDLSHNQLSGQIPA 541

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 307136262 686 SICHAKFLAVLSLSNNHLSGTIPPCLANLSSLVVLEMKNNHFSGSVPmlfPTGSqlrSLDLNGNEIEG 753
Cdd:PLN00113 542 SFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP---STGA---FLAINASAVAG 603
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
189-475 1.47e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.59  E-value: 1.47e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 189 NLTNLRDLALSDVFLLDISPSSFTNLSLSLASLTLSSCGLSGNFPPHIMSLPNLQVLQLENNYELEGqlpmsnwSESLEL 268
Cdd:COG4886   45 LLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSN-------LTNLES 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 269 LNLFSTKFSgEIPYSIGTAKSLRSLNLWSCNfIGGIPNSIGNLTKLSNIDLSNNNFNGkLPNTWNKLQSLSSFVIHKNSF 348
Cdd:COG4886  118 LDLSGNQLT-DLPEELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQI 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 349 mGQLPNSLFNLTHLSHMTFSSNLFSgPLPTYVAsdRLSNLIQLNMKNNSlIGAVPsWLYALPHLNYLDLSDNHFSSFIRD 428
Cdd:COG4886  195 -TDLPEPLGNLTNLEELDLSGNQLT-DLPEPLA--NLTNLETLDLSNNQ-LTDLP-ELGNLTNLEELDLSNNQLTDLPPL 268

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 307136262 429 FKSNSLEFLDLSANNLQGGIPESIYKQVNLTYLALGSNNLSGVLNLD 475
Cdd:COG4886  269 ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 32-83 4.94e-05

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 41.13  E-value: 4.94e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 307136262   32 DPKESLALLEFKRAFSLIESASNStcydaypktatWNQTNKDCCSWDGVKCD 83
Cdd:pfam08263   1 LNDDGQALLAFKSSLNDPPGALSS-----------WNSSSSDPCSWTGVTCD 41
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 620-776 6.96e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.81  E-value: 6.96e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 620 KATNLTFLDLSNNSLSGVIPSCFFNLTSIILL-ELKRNNFSGSIPIPPPLIlvytasenhftGEIPSSICHAKflaVLSL 698
Cdd:cd00116   79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLqELKLNNNGLGDRGLRLLA-----------KGLKDLPPALE---KLVL 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 699 SNNHLSGTIPPCLANL----SSLVVLEMKNNHFSGS-VPML---FPTGSQLRSLDLNGNEIE-------GELPPSLlncE 763
Cdd:cd00116  145 GRNRLEGASCEALAKAlranRDLKELNLANNGIGDAgIRALaegLKANCNLEVLDLNNNGLTdegasalAETLASL---K 221

                        170
                 ....*....|...
gi 307136262 764 NLRVLDLGNNKIT 776
Cdd:cd00116  222 SLEVLNLGDNNLT 234
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 55-753 8.12e-67

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 238.98  E-value: 8.12e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  55 STCYDAYPKTATWNQTNkDCCSWDGVKCDEEDEghtiVVGLDLSCSWLSGVLHPnnTLFTLSRLQTLNLSHNLLLSKFsP 134
Cdd:PLN00113  39 SSINDPLKYLSNWNSSA-DVCLWQGITCNNSSR----VVSIDLSGKNISGKISS--AIFRLPYIQTINLSNNQLSGPI-P 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 135 Q--FGNFKNLRHLDLSSSYFMGDVPLeiSYLSNLVSLDLSSNYLSfsnvvmnqlvhnltnlrdlalsdvflldispssft 212
Cdd:PLN00113 111 DdiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS----------------------------------- 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 213 nlslslasltlsscglsGNFPPHIMSLPNLQVLQLENNYeLEGQLPMS--NWSeSLELLNLFSTKFSGEIPYSIGTAKSL 290
Cdd:PLN00113 154 -----------------GEIPNDIGSFSSLKVLDLGGNV-LVGKIPNSltNLT-SLEFLTLASNQLVGQIPRELGQMKSL 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 291 RSLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSN 370
Cdd:PLN00113 215 KWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 371 LFSGPLPTYVAsdRLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFI-RDF-KSNSLEFLDLSANNLQGGI 448
Cdd:PLN00113 295 SLSGEIPELVI--QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIpKNLgKHNNLTVLDLSTNNLTGEI 372

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 449 PESIYKQVNLTYLALGSNNLSgvlnldmllrvqsrlvsldvsynkqlmvqstnvsfvnnnlvhiemgsctlGKVPYFLRY 528
Cdd:PLN00113 373 PEGLCSSGNLFKLILFSNSLE--------------------------------------------------GEIPKSLGA 402

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 529 QKKLEHLDLSNTQIQGGIPKWFSELSALNHLNLSHNSLSSGIeilltlpnlgdlflDSNLFKLPfpmlpsSIKQFTASNN 608
Cdd:PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI--------------NSRKWDMP------SLQMLSLARN 462

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 609 RFSGNIhPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELKRNNFSGSIP--IPPPLILV-YTASENHFTGEIPS 685
Cdd:PLN00113 463 KFFGGL-PDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPdeLSSCKKLVsLDLSHNQLSGQIPA 541

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 307136262 686 SICHAKFLAVLSLSNNHLSGTIPPCLANLSSLVVLEMKNNHFSGSVPmlfPTGSqlrSLDLNGNEIEG 753
Cdd:PLN00113 542 SFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP---STGA---FLAINASAVAG 603
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 290-777 3.45e-40

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 159.63  E-value: 3.45e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 290 LRSLNLWS-----CNFIGGIPNsigNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTH-LS 363
Cdd:PLN00113  45 LKYLSNWNssadvCLWQGITCN---NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSsLR 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 364 HMTFSSNLFSGPLPtyvaSDRLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFIRDFKSN--SLEFLDLSA 441
Cdd:PLN00113 122 YLNLSNNNFTGSIP----RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNltSLEFLTLAS 197

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 442 NNLQGGIPESIYKQVNLTYLALGSNNLSGvlnldmllrvqsrlvsldvsynkqlmvqstnvsfvnnnlvhiemgsctlgk 521
Cdd:PLN00113 198 NQLVGQIPRELGQMKSLKWIYLGYNNLSG--------------------------------------------------- 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 522 vpyflryqkklehldlsntqiqgGIPKWFSELSALNHLNLSHNSLSSGIEilltlPNLGDLfldsnlfklpfpmlpSSIK 601
Cdd:PLN00113 227 -----------------------EIPYEIGGLTSLNHLDLVYNNLTGPIP-----SSLGNL---------------KNLQ 263

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 602 QFTASNNRFSGNIHPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELkrnnFSgsipippplilvytaseNHFTG 681
Cdd:PLN00113 264 YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL----FS-----------------NNFTG 322

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 682 EIPSSICHAKFLAVLSLSNNHLSGTIPPCLANLSSLVVLEMKNNHFSGSVPMLFPTGSQLRSLDLNGNEIEGELPPSLLN 761
Cdd:PLN00113 323 KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGA 402

                        490
                 ....*....|....*.
gi 307136262 762 CENLRVLDLGNNKITG 777
Cdd:PLN00113 403 CRSLRRVRLQDNSFSG 418
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
189-475 1.47e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.59  E-value: 1.47e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 189 NLTNLRDLALSDVFLLDISPSSFTNLSLSLASLTLSSCGLSGNFPPHIMSLPNLQVLQLENNYELEGqlpmsnwSESLEL 268
Cdd:COG4886   45 LLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSN-------LTNLES 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 269 LNLFSTKFSgEIPYSIGTAKSLRSLNLWSCNfIGGIPNSIGNLTKLSNIDLSNNNFNGkLPNTWNKLQSLSSFVIHKNSF 348
Cdd:COG4886  118 LDLSGNQLT-DLPEELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQI 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 349 mGQLPNSLFNLTHLSHMTFSSNLFSgPLPTYVAsdRLSNLIQLNMKNNSlIGAVPsWLYALPHLNYLDLSDNHFSSFIRD 428
Cdd:COG4886  195 -TDLPEPLGNLTNLEELDLSGNQLT-DLPEPLA--NLTNLETLDLSNNQ-LTDLP-ELGNLTNLEELDLSNNQLTDLPPL 268

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 307136262 429 FKSNSLEFLDLSANNLQGGIPESIYKQVNLTYLALGSNNLSGVLNLD 475
Cdd:COG4886  269 ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
293-709 5.04e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 74.97  E-value: 5.04e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 293 LNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSNLF 372
Cdd:COG4886    3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 373 SGPLPTYVASDRLSNLIQLNMKNNSLIGAvpswlyaLPHLNYLDLSDNHFSSFIRDFKS-NSLEFLDLSANNLQGgIPES 451
Cdd:COG4886   83 SLLLLGLTDLGDLTNLTELDLSGNEELSN-------LTNLESLDLSGNQLTDLPEELANlTNLKELDLSNNQLTD-LPEP 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 452 IYKQVNLTYLALGSNNLSgvlNLDMLLRVQSRLVSLDVSYNKqlmvqstnvsfvnnnlvhiemgsctLGKVPYFLRYQKK 531
Cdd:COG4886  155 LGNLTNLKSLDLSNNQLT---DLPEELGNLTNLKELDLSNNQ-------------------------ITDLPEPLGNLTN 206

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 532 LEHLDLSNTQIQGgIPKWFSELSALNHLNLSHNSLSSgIEILLTLPNLGDLFLdsnlfklpfpmlpssikqftaSNNRFS 611
Cdd:COG4886  207 LEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQLTD-LPELGNLTNLEELDL---------------------SNNQLT 263

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 612 GniHPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELKRNNFSGSIPIPPPLILVYTASENHFTGEIPSSICHAK 691
Cdd:COG4886  264 D--LPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLA 341

                        410
                 ....*....|....*...
gi 307136262 692 FLAVLSLSNNHLSGTIPP 709
Cdd:COG4886  342 LSLSLLALLTLLLLLNLL 359
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
437-777 9.91e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 73.81  E-value: 9.91e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 437 LDLSANNLQGGIPESIYKQVNLTYLALGSNNLSGVLNLDMLLRVQSRLVSLDVSYNKQLMVQSTNVSFVNNNLVHIEMGS 516
Cdd:COG4886    2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 517 CTLGKV-PYFLRYQKKLEHLDLSNTQIqggipkwFSELSALNHLNLSHNSLSSGIEILLTLPNLGDLFLdsnlfklpfpm 595
Cdd:COG4886   82 LSLLLLgLTDLGDLTNLTELDLSGNEE-------LSNLTNLESLDLSGNQLTDLPEELANLTNLKELDL----------- 143

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 596 lpssikqftaSNNRFSgNIHPSICKATNLTFLDLSNNSLSGvIPSCFFNLTSIILLELKRNNFSgsipippplilvytas 675
Cdd:COG4886  144 ----------SNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT---------------- 195

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 676 enhftgEIPSSICHAKFLAVLSLSNNHLSgTIPPCLANLSSLVVLEMKNNHFSgSVPMLFpTGSQLRSLDLNGNEIEGel 755
Cdd:COG4886  196 ------DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLPELG-NLTNLEELDLSNNQLTD-- 264

                        330       340
                 ....*....|....*....|..
gi 307136262 756 PPSLLNCENLRVLDLGNNKITG 777
Cdd:COG4886  265 LPPLANLTNLKTLDLSNNQLTD 286
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
236-653 1.37e-13

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 73.43  E-value: 1.37e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 236 IMSLPNLQVLQLENNYELEGQLPMSNWSESLELLNLFSTKFSGEIPYSIGTAKSLRSLNLWSCNFIGGIPNSIGNLTKLS 315
Cdd:COG4886   20 LLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLT 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 316 NIDLSNNNFNGKLPNtwnklqsLSSFVIHKNSFmGQLPNSLFNLTHLSHMTFSSNLFSgPLPTYVASdrLSNLIQLNMKN 395
Cdd:COG4886  100 ELDLSGNEELSNLTN-------LESLDLSGNQL-TDLPEELANLTNLKELDLSNNQLT-DLPEPLGN--LTNLKSLDLSN 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 396 NSLIGaVPSWLYALPHLNYLDLSDNHFSSFIRDFKS-NSLEFLDLSANNLQGgIPESIYKQVNLTYLALGSNNLSGVLNL 474
Cdd:COG4886  169 NQLTD-LPEELGNLTNLKELDLSNNQITDLPEPLGNlTNLEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQLTDLPEL 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 475 DMLlrvqSRLVSLDVSYNkqlmvQSTNVSFVNNNlvhiemgsctlgkvpyflryqKKLEHLDLSNTQIQGGIPKWFSELS 554
Cdd:COG4886  247 GNL----TNLEELDLSNN-----QLTDLPPLANL---------------------TNLKTLDLSNNQLTDLKLKELELLL 296

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 555 ALNHLNLSHNSLSSGIEILLTLPNLGDLFLDSNLFKLPFPMLPSSIKQFTASNNRFSGNIHPSICKATNLTFLDLSNNSL 634
Cdd:COG4886  297 GLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLE 376

                        410
                 ....*....|....*....
gi 307136262 635 SGVIPSCFFNLTSIILLEL 653
Cdd:COG4886  377 ATLLTLALLLLTLLLLLLT 395
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
391-774 1.62e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 70.35  E-value: 1.62e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 391 LNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFIRDFKSNSLEFLDLSANNLQGGIPESIYKQVNLTYLALGSNNLSG 470
Cdd:COG4886    2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 471 VLNLDMLLRVQSRLVSLdvsynKQLMVQSTNVSFVNNNLVHIEMGSCTLGKVPYFLRYQKKLEHLDLSNTQIQgGIPKWF 550
Cdd:COG4886   82 LSLLLLGLTDLGDLTNL-----TELDLSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT-DLPEPL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 551 SELSALNHLNLSHNSLSSGIEILLTLPNLGDLFLDSNLFKlpfpmlpssikqftasnnrfsgNIHPSICKATNLTFLDLS 630
Cdd:COG4886  156 GNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQIT----------------------DLPEPLGNLTNLEELDLS 213

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 631 NNSLSgVIPSCFFNLTSIILLELKRNNFSgSIPippplilvytasenhftgeipsSICHAKFLAVLSLSNNHLSGTipPC 710
Cdd:COG4886  214 GNQLT-DLPEPLANLTNLETLDLSNNQLT-DLP----------------------ELGNLTNLEELDLSNNQLTDL--PP 267

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 307136262 711 LANLSSLVVLEMKNNHFSGSVPMLFPTGSQLRSLDLNGNEIEGELPPSLLNCENLRVLDLGNNK 774
Cdd:COG4886  268 LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLK 331
PLN03150 PLN03150
hypothetical protein; Provisional
 681-759 1.76e-12

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 70.61  E-value: 1.76e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 307136262 681 GEIPSSICHAKFLAVLSLSNNHLSGTIPPCLANLSSLVVLEMKNNHFSGSVPMLFPTGSQLRSLDLNGNEIEGELPPSL 759
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 269-370 6.72e-12

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 69.07  E-value: 6.72e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 269 LNLFSTKFSGEIPYSIGTAKSLRSLNLwSCNFI-GGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNS 347
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINL-SGNSIrGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501

                         90       100
                 ....*....|....*....|....
gi 307136262 348 FMGQLPNSLFN-LTHLSHMTFSSN 370
Cdd:PLN03150 502 LSGRVPAALGGrLLHRASFNFTDN 525
PLN03150 PLN03150
hypothetical protein; Provisional
 314-420 1.48e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 64.45  E-value: 1.48e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 314 LSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSNLFSGPLPTYVAsdRLSNLIQLNM 393
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLG--QLTSLRILNL 497

                         90       100
                 ....*....|....*....|....*...
gi 307136262 394 KNNSLIGAVPSWLYALP-HLNYLDLSDN 420
Cdd:PLN03150 498 NGNSLSGRVPAALGGRLlHRASFNFTDN 525
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
136-469 3.53e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.64  E-value: 3.53e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 136 FGNFKNLRHLDLSSSYFmGDVPLEISYLSNLVSLDLSSNYLSfsnvVMNQLVHNLTNLRDLALSDVFLLDIspssftnls 215
Cdd:COG4886  109 LSNLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNNQLT----DLPEPLGNLTNLKSLDLSNNQLTDL--------- 174

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 216 lslasltlsscglsgnfPPHIMSLPNLQVLQLENNYELEGQLPMSNWSeSLELLNLFSTKFSgEIPYSIGTAKSLRSLNL 295
Cdd:COG4886  175 -----------------PEELGNLTNLKELDLSNNQITDLPEPLGNLT-NLEELDLSGNQLT-DLPEPLANLTNLETLDL 235

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 296 WScNFIGGIPnSIGNLTKLSNIDLSNNNFNGkLPNTWNkLQSLSSFVIHKNSFMGQLPNSLFNLT-----HLSHMTFSSN 370
Cdd:COG4886  236 SN-NQLTDLP-ELGNLTNLEELDLSNNQLTD-LPPLAN-LTNLKTLDLSNNQLTDLKLKELELLLglnslLLLLLLLNLL 311

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 371 LFSGPLPTYVASDRLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFIRDFKSNSLEFLDLSANNLQGGIPE 450
Cdd:COG4886  312 ELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLL 391

                        330
                 ....*....|....*....
gi 307136262 451 SIYKQVNLTYLALGSNNLS 469
Cdd:COG4886  392 LLLTTTAGVLLLTLALLDA 410
PLN03150 PLN03150
hypothetical protein; Provisional
 302-412 7.30e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 62.53  E-value: 7.30e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 302 GGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSNLFSGPLPTYVA 381
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511

                         90       100       110
                 ....*....|....*....|....*....|.
gi 307136262 382 SdRLSNLIQLNMKNNSLIGAVPSWLYALPHL 412
Cdd:PLN03150 512 G-RLLHRASFNFTDNAGLCGIPGLRACGPHL 541
PLN03150 PLN03150
hypothetical protein; Provisional
 249-348 8.45e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 62.14  E-value: 8.45e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 249 NNYELEGQLPmSNWS--ESLELLNLFSTKFSGEIPYSIGTAKSLRSLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNG 326
Cdd:PLN03150 426 DNQGLRGFIP-NDISklRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504

                         90       100
                 ....*....|....*....|..
gi 307136262 327 KLPNtwnklqSLSSFVIHKNSF 348
Cdd:PLN03150 505 RVPA------ALGGRLLHRASF 520
PLN03150 PLN03150
hypothetical protein; Provisional
 596-735 5.96e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 56.36  E-value: 5.96e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 596 LPSSIKQF------TASNNRFSGNIHPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELKRNNFSGSIPIPPPLI 669
Cdd:PLN03150 434 IPNDISKLrhlqsiNLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGR 513

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 307136262 670 LVYTASENhFTgeipssichakflavlslSNNHLSGT--IPPCLANLSSLVVLEMKnnhFSGSVPMLF 735
Cdd:PLN03150 514 LLHRASFN-FT------------------DNAGLCGIpgLRACGPHLSVGAKIGIA---FGVSVAFLF 559
PLN03150 PLN03150
hypothetical protein; Provisional
 391-470 1.51e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 54.82  E-value: 1.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 391 LNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFIRDFKSN--SLEFLDLSANNLQGGIPESIYKQVNLTYLALGSNNL 468
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSitSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                 ..
gi 307136262 469 SG 470
Cdd:PLN03150 503 SG 504
PLN03150 PLN03150
hypothetical protein; Provisional
 692-777 3.62e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 53.67  E-value: 3.62e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 692 FLAVLSLSNNHLSGTIPPCLANLSSLVVLEMKNNHFSGSVPMLFPTGSQLRSLDLNGNEIEGELPPSLLNCENLRVLDLG 771
Cdd:PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498


                 ....*.
gi 307136262 772 NNKITG 777
Cdd:PLN03150 499 GNSLSG 504
PLN03150 PLN03150
hypothetical protein; Provisional
 607-711 1.39e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 51.74  E-value: 1.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 607 NNRFSGNIHPSICKATNLTFLDLSNNSLSGVIPSCFFNLTSIILLELKRNNFSGSipippplilvytasenhftgeIPSS 686
Cdd:PLN03150 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS---------------------IPES 485

                         90       100
                 ....*....|....*....|....*
gi 307136262 687 ICHAKFLAVLSLSNNHLSGTIPPCL 711
Cdd:PLN03150 486 LGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 33-177 4.29e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.20  E-value: 4.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  33 PKESLALLEFKRAFSLIESASnstcydAYPKTATWNqtnKDCCS-----WDGVKCD-EEDEGHTIVVGLDLSCSWLSGVL 106
Cdd:PLN03150 364 TAESKTLLEEVSALQTLKSSL------GLPLRFGWN---GDPCVpqqhpWSGADCQfDSTKGKWFIDGLGLDNQGLRGFI 434

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 307136262 107 hpNNTLFTLSRLQTLNLSHNLLLSKFSPQFGNFKNLRHLDLSSSYFMGDVPLEISYLSNLVSLDLSSNYLS 177
Cdd:PLN03150 435 --PNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 32-83 4.94e-05

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 41.13  E-value: 4.94e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 307136262   32 DPKESLALLEFKRAFSLIESASNStcydaypktatWNQTNKDCCSWDGVKCD 83
Cdd:pfam08263   1 LNDDGQALLAFKSSLNDPPGALSS-----------WNSSSSDPCSWTGVTCD 41
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 266-539 5.29e-05

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 46.79  E-value: 5.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  266 LELLNLFSTKFSGEIPySIGTAKSLRSLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNkLQSLSSFVIHK 345
Cdd:PLN03210  636 LRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGIN-LKSLYRLNLSG 713

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  346 NSFMGQLPN-----SLFNLTHLSHMTFSSNLfsgplptyvasdRLSNLIQL---NMKNNSLIGAV----PSWLYALPHLN 413
Cdd:PLN03210  714 CSRLKSFPDistniSWLDLDETAIEEFPSNL------------RLENLDELilcEMKSEKLWERVqpltPLMTMLSPSLT 781

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  414 YLDLSDNhfssfirdfksNSLEFLDLSANNLQGGIPESIYKQVNLTYLALGSnNLSGVLNLDmlLRVQSRLVSL-DVSYN 492
Cdd:PLN03210  782 RLFLSDI-----------PSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLD--LSGCSRLRTFpDISTN 847

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 307136262  493 -KQLMVQSTNVSFVN------NNLVHIEMGSCT-LGKVPYFLRYQKKLEHLDLSN 539
Cdd:PLN03210  848 iSDLNLSRTGIEEVPwwiekfSNLSFLDMNGCNnLQRVSLNISKLKHLETVDFSD 902
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 620-776 6.96e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.81  E-value: 6.96e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 620 KATNLTFLDLSNNSLSGVIPSCFFNLTSIILL-ELKRNNFSGSIPIPPPLIlvytasenhftGEIPSSICHAKflaVLSL 698
Cdd:cd00116   79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLqELKLNNNGLGDRGLRLLA-----------KGLKDLPPALE---KLVL 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 699 SNNHLSGTIPPCLANL----SSLVVLEMKNNHFSGS-VPML---FPTGSQLRSLDLNGNEIE-------GELPPSLlncE 763
Cdd:cd00116  145 GRNRLEGASCEALAKAlranRDLKELNLANNGIGDAgIRALaegLKANCNLEVLDLNNNGLTdegasalAETLASL---K 221

                        170
                 ....*....|...
gi 307136262 764 NLRVLDLGNNKIT 776
Cdd:cd00116  222 SLEVLNLGDNNLT 234
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 235-493 9.15e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.42  E-value: 9.15e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 235 HIMSLPNLQVLQLENN----YELEGQLPMSNWSESLELLNLfSTKFSGEIPYSIGTAkslrslnlwscnfiggiPNSIGN 310
Cdd:cd00116   18 LLPKLLCLQVLRLEGNtlgeEAAKALASALRPQPSLKELCL-SLNETGRIPRGLQSL-----------------LQGLTK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 311 LTKLSNIDLSNNNFNGKLPNTWnklQSLssfviHKNSFMGQLpnslfnltHLSHmtfsSNLFSGPLPTYVAS--DRLSNL 388
Cdd:cd00116   80 GCGLQELDLSDNALGPDGCGVL---ESL-----LRSSSLQEL--------KLNN----NGLGDRGLRLLAKGlkDLPPAL 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 389 IQLNMKNNSLIGA-VPSWLYALPH---LNYLDLSDNHFSSF-----IRDFKSNS-LEFLDLSANNL--QGG--IPESIYK 454
Cdd:cd00116  140 EKLVLGRNRLEGAsCEALAKALRAnrdLKELNLANNGIGDAgiralAEGLKANCnLEVLDLNNNGLtdEGAsaLAETLAS 219

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 307136262 455 QVNLTYLALGSNNLS--GVLNL-DMLLRVQSRLVSLDVSYNK 493
Cdd:cd00116  220 LKSLEVLNLGDNNLTdaGAAALaSALLSPNISLLTLSLSCND 261
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
134-417 1.46e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 44.92  E-value: 1.46e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 134 PQFGNFKNLRHLDLSSSYFmGDVPLEISYLSNLVSLDLSSNYLSfsnvVMNQLVHNLTNLRDLALSDVFLLDIsPSSFTN 213
Cdd:COG4886  130 EELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLT----DLPEELGNLTNLKELDLSNNQITDL-PEPLGN 203

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 214 LSLSLAsltlssCGLSGN----FPPHIMSLPNLQVLQLENNyELEGQLPMSNWSeSLELLNLFSTKFSgEIPySIGTAKS 289
Cdd:COG4886  204 LTNLEE------LDLSGNqltdLPEPLANLTNLETLDLSNN-QLTDLPELGNLT-NLEELDLSNNQLT-DLP-PLANLTN 273

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 290 LRSLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSS 369
Cdd:COG4886  274 LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 307136262 370 NLFSGPLPTYVASDRLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDL 417
Cdd:COG4886  354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVL 401
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 412-493 1.89e-04

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 44.78  E-value: 1.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 412 LNYLDLSDNH-----FSSFIRDFKSN-SLEFLDLSANNL--QG--GIPESIYKQVNLTYLALGSNNLS--GVLNLDMLLR 479
Cdd:COG5238  238 LTTLDLSNNQigdegVIALAEALKNNtTVETLYLSGNQIgaEGaiALAKALQGNTTLTSLDLSVNRIGdeGAIALAEGLQ 317

                         90
                 ....*....|....
gi 307136262 480 VQSRLVSLDVSYNK 493
Cdd:COG5238  318 GNKTLHTLNLAYNG 331
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 400-568 2.23e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 43.88  E-value: 2.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 400 GAVPSWLYALPHLNYLDLSDNHFS-----SFIRDFKSNSLEFLDLSANNLQGGIPESIYK-----QVNLTYLALGSNNLS 469
Cdd:cd00116   71 QSLLQGLTKGCGLQELDLSDNALGpdgcgVLESLLRSSSLQELKLNNNGLGDRGLRLLAKglkdlPPALEKLVLGRNRLE 150

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 470 GVLNLDM--LLRVQSRLVSLDVSynkqlmvqstnvsfvNNNLVHieMGSCTLGKVpyfLRYQKKLEHLDLSNTQI--QGG 545
Cdd:cd00116  151 GASCEALakALRANRDLKELNLA---------------NNGIGD--AGIRALAEG---LKANCNLEVLDLNNNGLtdEGA 210

                        170       180
                 ....*....|....*....|....*
gi 307136262 546 --IPKWFSELSALNHLNLSHNSLSS 568
Cdd:cd00116  211 saLAETLASLKSLEVLNLGDNNLTD 235
PLN03150 PLN03150
hypothetical protein; Provisional
 384-452 2.23e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.81  E-value: 2.23e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 307136262 384 RLSNLIQLNMKNNSLIGAVPSWLYALPHLNYLDLSDNHFSSFIRDF--KSNSLEFLDLSANNLQGGIPESI 452
Cdd:PLN03150 440 KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESlgQLTSLRILNLNGNSLSGRVPAAL 510
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
132-398 3.56e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 43.77  E-value: 3.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 132 FSPQFGNFKNLRHLDLSSSYFmGDVPLEISYLSNLVSLDLSSNYLSfsnvVMNQLVHNLTNLRDLALSDVFLLDIspssf 211
Cdd:COG4886  174 LPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT----DLPEPLANLTNLETLDLSNNQLTDL----- 243

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 212 tnlslslasltlsscglsgnfpPHIMSLPNLQVLQLENNYelEGQLPMSNWSESLELLNLFSTKFSGEIPYSIGTAKSLR 291
Cdd:COG4886  244 ----------------------PELGNLTNLEELDLSNNQ--LTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLN 299

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 292 SLNLWSCNFIGGIPNSIGNLTKLSNIDLSNNNFNGKLPNTWNKLQSLSSFVIHKNSFMGQLPNSLFNLTHLSHMTFSSNL 371
Cdd:COG4886  300 SLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATL 379

                        250       260
                 ....*....|....*....|....*..
gi 307136262 372 FSGPLPTYVASDRLSNLIQLNMKNNSL 398
Cdd:COG4886  380 LTLALLLLTLLLLLLTTTAGVLLLTLA 406
PRK15387 PRK15387
type III secretion system effector E3 ubiquitin transferase SspH2;
457-716 4.87e-04

type III secretion system effector E3 ubiquitin transferase SspH2;


Pssm-ID: 185285 [Multi-domain]  Cd Length: 788  Bit Score: 43.61  E-value: 4.87e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 457 NLTYLALGSNNLSGVLNLDMLLRvqsrlvSLDVSYNKQLMVQST-----NVSFVNNNLVHIEM---GSCTL----GKVPY 524
Cdd:PRK15387 223 HITTLVIPDNNLTSLPALPPELR------TLEVSGNQLTSLPVLppgllELSIFSNPLTHLPAlpsGLCKLwifgNQLTS 296

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 525 FLRYQKKLEHLDLSNTQIqGGIPKWFSELSALNHLNlshNSLSSgieiLLTLPN-LGDLFLDSNLFKlPFPMLPSSIKQF 603
Cdd:PRK15387 297 LPVLPPGLQELSVSDNQL-ASLPALPSELCKLWAYN---NQLTS----LPTLPSgLQELSVSDNQLA-SLPTLPSELYKL 367

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 604 TASNNRFSGniHPSIckATNLTFLDLSNNSLSG--VIPScffnltsiillELKRNNFSG----SIPIPPPLILVYTASEN 677
Cdd:PRK15387 368 WAYNNRLTS--LPAL--PSGLKELIVSGNRLTSlpVLPS-----------ELKELMVSGnrltSLPMLPSGLLSLSVYRN 432

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 307136262 678 HFTgEIPSSICHAKFLAVLSLSNNHLSGTIPPCLANLSS 716
Cdd:PRK15387 433 QLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITS 470
PLN03150 PLN03150
hypothetical protein; Provisional
 530-640 6.23e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 43.27  E-value: 6.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 530 KKLEHLDLSNTQIQGGIPKWFSELSALNHLNLSHnslssgieilltlpnlgdlfldsnlfklpfpmlpssikqftasnNR 609
Cdd:PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSY--------------------------------------------NS 477

                         90       100       110
                 ....*....|....*....|....*....|.
gi 307136262 610 FSGNIHPSICKATNLTFLDLSNNSLSGVIPS 640
Cdd:PLN03150 478 FNGSIPESLGQLTSLRILNLNGNSLSGRVPA 508
LRR_8 pfam13855
Leucine rich repeat;
531-589 1.48e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 37.50  E-value: 1.48e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262  531 KLEHLDLSNTQIQGGIPKWFSELSALNHLNLSHNSLSSGIEILLT-LPNLGDLFLDSNLF 589
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSgLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
506-566 1.70e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 37.12  E-value: 1.70e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 307136262  506 NNNLVHIEMGSctlgkvpyfLRYQKKLEHLDLSNTQIQGGIPKWFSELSALNHLNLSHNSL 566
Cdd:pfam13855  10 NNRLTSLDDGA---------FKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 526-776 2.52e-03

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 40.80  E-value: 2.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 526 LRYQKKLEHLDLSNTQIQGGIPKWFSELSA------LNHLNLSHNSLSS----GIEILLTLPNLGDLFLdsnlfklpfpm 595
Cdd:cd00116   47 LRPQPSLKELCLSLNETGRIPRGLQSLLQGltkgcgLQELDLSDNALGPdgcgVLESLLRSSSLQELKL----------- 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 596 lpssikqftaSNNRFSGNIHPSICKA-----TNLTFLDLSNNSLSGviPSCFfnltsIILLELKRNnfsgsipippPLIL 670
Cdd:cd00116  116 ----------NNNGLGDRGLRLLAKGlkdlpPALEKLVLGRNRLEG--ASCE-----ALAKALRAN----------RDLK 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307136262 671 VYTASENHFTGEIPSSICHA----KFLAVLSLSNNHL----SGTIPPCLANLSSLVVLEMKNNHFSGS-----VPMLFPT 737
Cdd:cd00116  169 ELNLANNGIGDAGIRALAEGlkanCNLEVLDLNNNGLtdegASALAETLASLKSLEVLNLGDNNLTDAgaaalASALLSP 248

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 307136262 738 GSQLRSLDLNGNEIEGE----LPPSLLNCENLRVLDLGNNKIT 776
Cdd:cd00116  249 NISLLTLSLSCNDITDDgakdLAEVLAEKESLLELDLRGNKFG 291
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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