|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
4-567 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 638.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 4 ISICSLSFFFLFIFGMLVMFFGVLYLFLDYSVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEG 83
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 84 ESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMLN 163
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 164 FGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLF 243
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 244 NFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLK 323
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 324 DSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLM 403
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 404 FGYTGLCTFFSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVVLPFYLSSLVILVVVIGFYFGYYISDLKISFT 483
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 484 LFSLKYNLLGGFMNLMWFMPYLSTKFIINLPMKMGFTYYKNFDCSWGEHFGGQGLYSLFIYFLDYIQSCYDYNFKSYFML 563
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
....
gi 306960157 564 FISW 567
Cdd:MTH00165 561 FLLW 564
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
19-566 |
6.87e-159 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 465.86 E-value: 6.87e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 19 MLVMFFGVLYLFL-DYSVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLF 97
Cdd:MTH00151 15 SVFLFPLLGYFGLnGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLF 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 98 ILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMLNFGSWNYLYYYNFVI 177
Cdd:MTH00151 95 VLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 178 nsfeMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFN-FGWFLLLIGCLT 256
Cdd:MTH00151 175 ----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSgFSSFLLFISLLT 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 257 MFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVY 336
Cdd:MTH00151 251 LLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFL 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 337 LMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFN 416
Cdd:MTH00151 331 SLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKS 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 417 DKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVVLPFYLSSLVILVVVIGFYFGYYISDLKisftLFSLKYNLLGGFM 496
Cdd:MTH00151 411 DEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSG----FSSSKMVKLSFFF 486
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 497 NLMWFMPYLSTKFIINLPMKMGFTYYKNFDCSWGEHFGGQGLYSLFIYFLDYIQSCYDYNFKSYFMLFIS 566
Cdd:MTH00151 487 SSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILL 556
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
19-542 |
2.54e-156 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 459.62 E-value: 2.54e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 19 MLVMFFGVLYL-----FLDYSVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMI 93
Cdd:MTH00207 14 LWFMSILMFPLslylmMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 94 ILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMLNFGSWNYLYYY 173
Cdd:MTH00207 94 VLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMW 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 174 NFVINSFemkiITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFN-FGWFLLLI 252
Cdd:MTH00207 174 QTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYwFNPALLLT 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 253 GCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMG 332
Cdd:MTH00207 250 ASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 333 SMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTF 412
Cdd:MTH00207 330 NLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPY 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 413 FSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVVLPFYLSSLVILVVVIGFYFGYYISDLKISFTLFSLKYNLL 492
Cdd:MTH00207 410 HHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLS 489
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 306960157 493 GGFMNLMWFMPYLSTKFIINLPMKMGFTYYKNFDCSWGEHFGGQGLYSLF 542
Cdd:MTH00207 490 HFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMF 539
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
19-565 |
1.30e-155 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 457.57 E-value: 1.30e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 19 MLVMFFGVLYL----FLDYSVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMII 94
Cdd:MTH00209 10 MLLFLFSFLMFvifmWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 95 LLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMLNFGSWNyLYYYN 174
Cdd:MTH00209 90 LLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 175 FVINSfeMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLF-NFGWFLLLIG 253
Cdd:MTH00209 169 FNSNL--GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpFFSMSLLLLG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 254 CLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGS 333
Cdd:MTH00209 247 SLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGN 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 334 MVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFF 413
Cdd:MTH00209 327 LWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLN 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 414 SFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVVLPFYLSSLVILVVVIGFYFGYYISDLkisfTLFSLKYNLLG 493
Cdd:MTH00209 407 SSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKK----NFFLIKGYKVN 482
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 306960157 494 GFMNLMWFMPYLSTKFIINLPMKMGFTYYKNFDCSWGEHFGGQGLYSLFIYFLDYIQSCYDYNFKSYFMLFI 565
Cdd:MTH00209 483 YFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMM 554
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
19-565 |
7.41e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 340.78 E-value: 7.41e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 19 MLVMFFGVLYLFL-----DYSVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMI 93
Cdd:MTH00211 36 KLSFFISLIPLLIfldqgLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKY 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 94 ILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALI-NRIGDVAILFSISWML-NFGSWNYLY 171
Cdd:MTH00211 116 LLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWEISQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 172 YYnfvINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSL-FNFGWFLL 250
Cdd:MTH00211 196 LF---ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNnQLILGAVL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 251 LIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRF 330
Cdd:MTH00211 273 LLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRK 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 331 MGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLC 410
Cdd:MTH00211 353 MGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFL 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 411 TFFSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVV-LPFYLSSLVILVVVIGFYFGYYISDLKISFTLFSLKY 489
Cdd:MTH00211 433 SLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTLS 512
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960157 490 nllggFMNLMWFMPYLSTKFIINLPMKMGFTY-YKNFDCSWGEHFGGQGLYSLFIYFLDYIQSCYDYNFKSYFMLFI 565
Cdd:MTH00211 513 -----FSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLL 584
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
27-565 |
1.66e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 290.66 E-value: 1.66e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 27 LYLFLDY---SVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIF 103
Cdd:MTH00066 49 LMIFINQgleSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 104 LIVSPNLISILLGWDGLGLVSYCLV-IYFQNVKSYSAGMLTALINRIGDVAILFSISW-MLNFGSWNYLYYynFVINSFE 181
Cdd:MTH00066 129 LVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI--FLLNDNS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 182 MkIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFL-LLIGCLTMFMS 260
Cdd:MTH00066 207 T-LPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 261 GIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPL 340
Cdd:MTH00066 286 AACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPI 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 341 TSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFNDKNY 420
Cdd:MTH00066 366 TTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNP 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 421 YISFGMLGLLLATIFGGSLLSWLIFPV-PYLVVLPFYLSSLVILVVVIGFYFGYYISDLkisfTLFSLKYNLLGGFMNLM 499
Cdd:MTH00066 446 LIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKI----TSKTTPKTKMHSFSNLL 521
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960157 500 WFMPYLSTKFIINLPMKMGFTYYKN-FDCSWGEHFGGQGLYSLFIYFLDYIQSCYDYNFKSYFMLFI 565
Cdd:MTH00066 522 AFFPTIIHRLSPKTNLNSGQNIATHlTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFL 588
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-566 |
9.09e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 289.56 E-value: 9.09e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 42 FDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLG 121
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 122 LVSYCLVIYFQNVKSYSAGMLTALI-NRIGDVAILFSISW-MLNFGSWNYL-YYYNFVINSFEMKIITMLVILASMTSSA 198
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAVIyNRIGDIGIILFLSLsLINFNSWNLNeILSLNNSNSFLINILLFGILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 199 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSlfNFGWFL---LLIGCLTMFMSGIGANFEFDLKKIIA 275
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS--NSPWFLslcLILGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 276 LSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGL 355
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 356 PFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFNDKNYYISFGMLGLLLATIF 435
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTII 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 436 GGSLLSWLIFPVPYLVVlPFYLSSLVILVVVIGFYFGYYISdlkISFTLFSLKYNLLgGFMNLMWFMPYLSTKFIINLPM 515
Cdd:MTH00208 490 SGWFFSNFVFNLPPLTL-PLILKSLPLIVTIIGAAFSFSFL---LSLSSNPINSNFF-SFLSNQWFFVNISHSIIISFSF 564
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 306960157 516 KMGFTY-YKNFDCSWGEHFGGQGLYSLFIYFLDYIQSCYDYNFKSYFMLFIS 566
Cdd:MTH00208 565 FTSLFGsTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTL 616
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
18-475 |
1.08e-89 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 288.59 E-value: 1.08e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 18 GMLVMFFGVLYLFLDY----SVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMI 93
Cdd:COG1009 37 APLAAFVLSLLLFPAVlggeVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAY 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 94 ILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALI-NRIGDVAILFSISWMLN-FGSWNYLY 171
Cdd:COG1009 117 LLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLvTRVGDLGLLLGILLLGAiAGTLNFSE 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 172 YYN---FVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNF-GW 247
Cdd:COG1009 197 LLAaapTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVwLT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 248 FLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLkDSQD 327
Cdd:COG1009 277 VVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRD 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 328 IRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILD-IVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGY 406
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGK 435
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 306960157 407 TGLCTFFSFNDKNYYISFGMLGLLLATIFGGSLLSWL---------IFPVPYLVVLPFYLSSLVILVVVIGFYFGYYI 475
Cdd:COG1009 436 PRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
51-446 |
1.05e-88 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 285.90 E-value: 1.05e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIY 130
Cdd:MTH00004 78 ISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 131 FQNVKSYSAGMLTALI-NRIGDVAILFSISWM-LNFGSWNYLYyynfVINSFEMKIITML-VILASMTSSAQIPFSSWLP 207
Cdd:MTH00004 158 WSGRAEANTAALQAIIyNRIGDIGLILSMAWLaMTLNTWEIQQ----LFSPTQTPTLPLLgLILAATGKSAQFGLHPWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 208 AAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFL-LLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:MTH00004 234 AAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMM 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 287 GILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDL 366
Cdd:MTH00004 314 VTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDT 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 367 ILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFP 446
Cdd:MTH00004 394 IIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILP 473
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
42-406 |
5.50e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 268.62 E-value: 5.50e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 42 FDLNGSmvvmtLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLG 121
Cdd:MTH00137 78 FDINIS-----FKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 122 LVSYCLVIYFQNVKSYSAGMLTALI-NRIGDVAILFSISWML-NFGSWNyLYYYNFVINSFEMKIITMLVILASMTSSAQ 199
Cdd:MTH00137 153 IMSFLLIGWWYGRADANTAALQAVIyNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 200 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFLLL-IGCLTMFMSGIGANFEFDLKKIIALST 278
Cdd:MTH00137 232 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLcLGALTTLFTATCALTQNDIKKIVAFST 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 279 LSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFL 358
Cdd:MTH00137 312 SSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFL 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 306960157 359 AGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGY 406
Cdd:MTH00137 392 AGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGH 439
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
18-475 |
7.07e-81 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 265.68 E-value: 7.07e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 18 GMLVMFFGVLYLFLDYSVFIELELFD--------LNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNR 89
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTqslfpwisVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 90 FVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV-IYFQNVKSYSAGMLTALINRIGDVAILFSISWMLN-FGSW 167
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 168 NYLYYYNFVINSFE--MKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSL-FN 244
Cdd:TIGR01974 196 NFQEVFALAPGAFFsaLTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELsPT 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 245 FGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKD 324
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 325 SQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMF 404
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 405 GYTGLCTFFSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVV-----------LPFYLSSLVILVVVIGFYFGY 473
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAY 515
|
..
gi 306960157 474 YI 475
Cdd:TIGR01974 516 LL 517
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
51-506 |
9.80e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 262.48 E-value: 9.80e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV-I 129
Cdd:MTH00108 78 LSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgW 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 130 YFQNVKSYSAGMLTALINRIGDVAILFSISW-MLNFGSWNYLYYynFVINSFEMKIITMLVILASMTSSAQIPFSSWLPA 208
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI--FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPS 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 209 AMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFLLL-IGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMG 287
Cdd:MTH00108 236 AMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 288 ILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLI 367
Cdd:MTH00108 316 TIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 368 LDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPV 447
Cdd:MTH00108 396 IEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPT 475
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960157 448 PY-LVVLPFYLSSLVILVVVIGFYFGYYIS----DLKISFTLFSLKY-NLLGGFMNLMW-FMPYLS 506
Cdd:MTH00108 476 TIpQMTMPLYLKLTALAVTILGFILALELNlltnNLKFKYPSNTFKFsNMLGYFPTIMHrLPPYMN 541
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
51-405 |
6.20e-78 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 258.16 E-value: 6.20e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV-I 129
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 130 YFQNVKSYSAGMLTALINRIGDVAILFSISWML-NFGSWNY-----LYYYNFVINSFEMKIITMLVILASMTSSAQIPFS 203
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYdevfaAAPQFFGLGWSALTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 204 SWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSL-FNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQL 282
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELsPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 283 GLMMgiLAMGFLKLTF--FHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAG 360
Cdd:PRK06590 318 GYMF--LALGVGAYAAaiFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAG 395
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 306960157 361 FYSKDLILDIVnLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFG 405
Cdd:PRK06590 396 FFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFHG 439
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
53-543 |
3.32e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 250.70 E-value: 3.32e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 53 LIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV-IYF 131
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 132 QNVKSYSAGMLTALINRIGDVAILFSISWMLN-FGSWNYLYYYNF---VINSFEMKIITMLVILASMTSSAQIPFSSWLP 207
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLlvtNINKESLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 208 AAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFLL-LIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 287 GILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDL 366
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 367 ILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLC--TFFSFNDKNYYISFGMLGLLLATIFGGSL----- 439
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKkeVFIGVHESSWNITFPLLLLAFGSIFVGYLgkevv 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 440 LSWLIFPV--PYLVVLPFYLSSL-VILVVVIGFYFGYYISDLKISFtlFSLKYNLLGGFMNLMWFMPYLSTKFIINLPMK 516
Cdd:MTH00210 476 LSNVIPPIvpNSIKMIPLLFSLLgALLAFVIYNSMVFLIKISRRGV--SIRLYHVIYTFLNSAWQFNYVINHFIVKNIWK 553
|
490 500
....*....|....*....|....*...
gi 306960157 517 MGF-TYYKNFDCSWGEHFGGQGLYSLFI 543
Cdd:MTH00210 554 FGHlITYRIIDRGLLEIIGPRGISKVLI 581
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
42-518 |
7.53e-72 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 241.52 E-value: 7.53e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 42 FDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLG 121
Cdd:MTH00020 65 LDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 122 LVSYCLV-IYFQNVKSYSAGMLTALINRIGDVAILFSISWMLN-FGSWNYLYYYNFVI--NSFEMKIITMLVILASMTSS 197
Cdd:MTH00020 145 LCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFSSVFNMVVsaPSSDITLICLFLFIGAVGKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 198 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFLL-LIGCLTMFMSGIGANFEFDLKKIIAL 276
Cdd:MTH00020 225 AQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 277 STLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLP 356
Cdd:MTH00020 305 STCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 357 FLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGL--CTFFSFNDKNYYISFGMLGLLLATI 434
Cdd:MTH00020 385 YLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLkkAVFFHLHEGDWNLLLPLGILALGSI 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 435 FGGSLLSWLI-------FPVPYLVV--LPFYLSSL-VILVVVIGFYFGYYIsdlkisFTLFSLKYNLLGGFMNLMWFMPY 504
Cdd:MTH00020 465 FVGYLAKEMIwsfqitlPPIVPLSIklLPVFLSLGgIGLVIILYFYSSKTF------RVPFSFIGRNSYTFLGSAWQFNY 538
|
490
....*....|....
gi 306960157 505 LSTKFIINLPMKMG 518
Cdd:MTH00020 539 ILNYFLIKKIWKGG 552
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
51-404 |
2.70e-60 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 211.81 E-value: 2.70e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 131 FQNVKSYSAGMLTALI-NRIGDVAILFSIswmlnFGswnyLYYynfVINSFEMKII---------------------TML 188
Cdd:PRK07376 165 WYDRKGAADAAQKAFVvNRVGDFGLLLGI-----LG----LFW---ATGSFDFDGIadrlselvssgavsgwlalllCIL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 189 VILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNF-GWFLLLIGCLTMFMSGIGANFE 267
Cdd:PRK07376 233 VFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQ 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 268 FDLKKIIALSTLSQLGLMMgiLAMGFLKLT--FFHLLTHAFFKALLFMCAGSMIHNLKD--------SQDIRFMGSMVYL 337
Cdd:PRK07376 313 NDIKKGLAYSTISQLGYMV--MAMGCGAYSagLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKY 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960157 338 MPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDwlNLMIFYLFFFSTGLTASYTFRLfYYLMF 404
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRM-YFLTF 454
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
21-525 |
5.43e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 202.45 E-value: 5.43e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 21 VMFFGVLYLFLDYSVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILS 100
Cdd:MTH00095 9 LFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 101 MIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFsiswmlnFGSWNYLYYYNFVINSF 180
Cdd:MTH00095 89 MFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSSYYFFSFSF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 181 EMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFLLLIGCLTMFMS 260
Cdd:MTH00095 162 FSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 261 GIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPL 340
Cdd:MTH00095 242 SLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 341 TSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFNDKNY 420
Cdd:MTH00095 322 IQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMN 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 421 YISFgmlgllLATIFGGSLLSWLIFPVPYLVVLPFYLSSLVILVVVIGFYFgyyISDLKISFTLFSLKYNLLGGFMNLMW 500
Cdd:MTH00095 402 FLSL------MLVFFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIML---FSFFFFKLLFKELKYKFFVDYFAKNV 472
|
490 500
....*....|....*....|....*
gi 306960157 501 FMPYLSTKFIINLPMKMGFTYYKNF 525
Cdd:MTH00095 473 IYKLKNLKFFDLFLNKFGYKGFNFF 497
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
26-370 |
5.30e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 189.01 E-value: 5.30e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 26 VLYLFLDYSVFI-----ELELFDLNGSMVVMT---LIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLF 97
Cdd:MTH00032 41 LIALFLAYEVLIndavvHIELYKWIESEIFIThigLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 98 ILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQN-VKSYSAGMLTALINRIGDVAILFSISWM------LNFGSWNYL 170
Cdd:MTH00032 121 TFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 171 YYYNFVINSFEMK------------IITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGP 238
Cdd:MTH00032 201 SVGSGIMDRGYYGggayesplapfaIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFP 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 239 LLSLFNFGWFLLLI-GCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAM-GFLKLTFFHLLTHAFFKALLFMCAG 316
Cdd:MTH00032 281 LFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAG 360
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 306960157 317 SMIHNLK-DSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDI 370
Cdd:MTH00032 361 SVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-384 |
5.81e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.42 E-value: 5.81e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 107 SPNLISILLGWDGLGLVSYCLVIYF-QNVKSYSAGMLTALINRIGDVAILFSISWMLNFGSWNYLY----YYNFVINSFE 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 182 MKIITMLVILASMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIYLLIRFGPLLSLFNFGW--FLLLIGCLTMF 258
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 259 MSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMV 335
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 306960157 336 YLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILD-IVNLDWLNLMIFYLF 384
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAaAVAASWIFLVLAGVV 289
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
72-404 |
2.23e-49 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 182.40 E-value: 2.23e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 72 LVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV-IYFQNVKSYSAGMLTALINRIG 150
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 151 DVAILFSIS---WMLN-------FGSWNYLYYYNFViNSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALV 220
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEV-NLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 221 HSSTLVTAGIYLLIRFGPLLSLFNFGWFLL-LIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFF 299
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 300 HLLTHAFFKALLFMCAGSMIHNL--------KDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILdiv 371
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL--- 421
|
330 340 350
....*....|....*....|....*....|....
gi 306960157 372 NLDWLNLMIFYLFFFST-GLTASYTFRLfYYLMF 404
Cdd:CHL00025 422 NDSWLYSPIFAIIAWSTaGLTAFYMFRI-YLLTF 454
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-402 |
7.86e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 169.94 E-value: 7.86e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYF 131
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 132 QNVKSYSAGMLTALINRIGDVAILFSISWM-LNFGSWNY--LYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPA 208
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMadLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 209 AMA-APTPVSALVhSSTLVTAGIYLLIR-----FGPLLSLFnFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQL 282
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRvltllFGADPALF-LGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 283 GLM-MGILAMGFLKLT--FFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLA 359
Cdd:COG0651 309 GYIlLGLGLGTPLGLAgaLFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 306960157 360 GFYSKDLILD-IVNLDWLNLMIfyLFFFSTGLTASYTFRLFYYL 402
Cdd:COG0651 388 GFVSKWLLLQaALEAGAWLLAA--VLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-368 |
1.32e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 168.94 E-value: 1.32e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 42 FDLNGSMVVmtlifDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLG 121
Cdd:PRK12647 54 LGVNLSFLL-----DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 122 LVSYcLVIYF--QNVKSYSAGMLTALINRIGDVAIL------------FSISWMLNFGSwnylyyynfVINSFEMKI-IT 186
Cdd:PRK12647 129 ITSF-LLIGFnhEREAARRAALQALLVTGGGGLALLaglillgnvtgtYSLSELLASGD---------VIREHPLYLaIL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 187 MLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSlFNFGWF--LLLIGCLTMFMSGIGA 264
Cdd:PRK12647 199 LLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLG-GTPLWQtiLPLFGGLTMLTGALLA 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 265 NFEFDLKKIIALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLT 341
Cdd:PRK12647 278 VRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPIT 356
|
330 340
....*....|....*....|....*..
gi 306960157 342 SICFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK12647 357 AAAALLAALSMAGLPPLFGFLAKELIY 383
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
42-405 |
1.68e-44 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 169.84 E-value: 1.68e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 42 FDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLG 121
Cdd:PRK12650 64 LLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 122 LVSYCLViyfqnVKSYSAG----MLTALINRIGDVAILF------------SISWMLNFGSWNYlyyynfviNSFEMKII 185
Cdd:PRK12650 144 LASFFLI-----ARSGSGGeagsIRTLILTFFGGLTLLAavaiaatqtgttSLSGILHSDVWAE--------KPGLTTVV 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 186 TMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSlFNFGWFLLLIGC--LTMFMSGIG 263
Cdd:PRK12650 211 AVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVgmITALMGAVF 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 264 ANFEFDLKKIIALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPL 340
Cdd:PRK12650 290 AVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPF 368
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960157 341 TSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFG 405
Cdd:PRK12650 369 TFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVFTFAYSARLVLG 433
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
52-405 |
1.05e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 166.56 E-value: 1.05e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIY- 130
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYw 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 131 FQNVKSYSAGMLTALINRIGDVAILFSISWML----NFGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWL 206
Cdd:TIGR00940 150 HHRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 207 PAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLS-LFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM 285
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAgTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 286 MGILAMGFLKLTF----------------FHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLTSICFNVSS 349
Cdd:TIGR00940 310 MVLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960157 350 LSLCGLPFLAGFYSKDLIL---------DIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFG 405
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFaeaitahlvNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
56-369 |
7.17e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 158.38 E-value: 7.17e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 56 DWMSLIFMSFVMYISALVIYYSEDYMEGES-NMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNV 134
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 135 KSYSAGMLTA-LINRIGDVAILFSISWMLNFGSWN----YLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAA 209
Cdd:PRK12646 157 GDSQFGAIQSfMITVFGGLALLVGFIMLYIMTGTNniteILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 210 MAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNF-GWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGI 288
Cdd:PRK12646 237 MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAM 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 289 LAMG-----------------FLKLTFFHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLTSICFNVSSLS 351
Cdd:PRK12646 317 VGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALS 395
|
330
....*....|....*...
gi 306960157 352 LCGLPFLAGFYSKDLILD 369
Cdd:PRK12646 396 MAGVPFLNGFLSKEMFLD 413
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-405 |
2.04e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 157.27 E-value: 2.04e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYF 131
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 132 QNVKSYSAGMLTAL-INRIGDVAILfsiSWMLNFGSwnylyyynfVINSFEMKII----------------TMLVILASM 194
Cdd:PRK12648 151 HHRADARRGARMALtVTGAGGLALL---AGVLLLGH---------IVGSYDLDVVlaagdlirahplyppaLVLILLGAF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 195 TSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSlfnfG---WFLL--LIGCLTMFMSGIGANFEFD 269
Cdd:PRK12648 219 TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLA----GteeWFWIvgGAGLITLLLGAYFALFQHD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 270 LKKIIALSTLSQLGLMMGILAMGflklT-------FFHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLTS 342
Cdd:PRK12648 295 LKGLLAYSTISHLGLITLLLGLG----SplaavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITA 369
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 306960157 343 ICFNVSSLSLCGLPFLAGFYSKDL----ILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFG 405
Cdd:PRK12648 370 TLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFG 436
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
20-477 |
6.29e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 149.64 E-value: 6.29e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 20 LVMFFGVLYLFLDY-SVFIELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFI 98
Cdd:MTH00063 7 LLLCLLIFFLFLVGvSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 99 LSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWmlnfgswNYLYYYNFVIn 178
Cdd:MTH00063 87 LVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-------SCWGGSGSFL- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 179 sfemkiITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGWFLLLIGCLTMF 258
Cdd:MTH00063 159 ------CCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 259 MSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIrfmgSMVYLM 338
Cdd:MTH00063 233 ITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSS----NCVYSS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 339 PLTSICFNVSS----LSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFS 414
Cdd:MTH00063 309 ILYGSWNLFYLfllvLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSGVR 388
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960157 415 FndkNYYISFGMLGLLLATIFggsllsWLIFPVPYLVVLPFYLSSLVILVVVIGFYFGYYISD 477
Cdd:MTH00063 389 F---LFFNSGLMVFLWLFINY------YVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYD 442
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
20-368 |
2.23e-38 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 147.43 E-value: 2.23e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 20 LVMFFGVLYLFLDYSVFIELELFDLnGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYME-------GESNMNRFVM 92
Cdd:PRK06525 39 LCMLSLAYAFYQAGKVAVTLTLVNL-GDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYA 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 93 IILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMlnFGSWNYLYY 172
Cdd:PRK06525 118 FLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATL--FLQTGTFAL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 173 YNFVINSFEMKIITMLVIL-ASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFgpLLSLFN----FGW 247
Cdd:PRK06525 196 SALSGLHGSLKYLVFLGILfAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPiphvIGY 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 248 FLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGF------LKLTFFHLLTHAFFKALLFMCAGSMIHN 321
Cdd:PRK06525 274 VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgsrlaLEGSIAYIFNHAFAKSLFFLVAGALSYS 353
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 306960157 322 LkDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK06525 354 C-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
52-405 |
1.04e-37 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 148.92 E-value: 1.04e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEGES-NMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 131 -FQNVKSYSAGMLTALINRIGDVAIL------------FSISWMLNFGSwnylyyynfVINSFEMKIITM-LVILASMTS 196
Cdd:PRK12645 153 wYEREASRYGAQKSMLITVFGGLSMLggfillyimtgsFSIREMIANAD---------EIQNSPLFIPAMiLILLGAFTK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 197 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSlFNFGWFLL--LIGCLTMFMSGIGANFEFDLKKII 274
Cdd:PRK12645 224 SAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFA-GSQVWFWTvtLVGLITLFWGSLNAVKQTDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 275 ALSTLSQLGLMMGILAMGFLKLTF----------------FHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLM 338
Cdd:PRK12645 303 AFSTVSQLGLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIM 381
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960157 339 PLTSICFNVSSLSLCGLPFLAGFYSKDL----ILDIVNLDWLNLMIFYLFFFSTGLTAS-----YTFRLFYYLMFG 405
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMffesMLNATEANLFSLDTWGVLFPVIAWVASvftfvYSIIFIFKTFFG 457
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-400 |
2.91e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 141.99 E-value: 2.91e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYM-EGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV-I 129
Cdd:PRK12644 69 AFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIgH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 130 YFQNVKSYSAGMLTALINRIGDVAILFSISWMLNF-GSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPA 208
Cdd:PRK12644 149 YAERAASRRAALQALLVTTAGGLAMLVGIIILGQAaGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 209 AMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFgWFLLLI--GCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:PRK12644 229 AMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPV-WRPTVLvlGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLT 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 287 GILAMG-----FLKLTFfhLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGF 361
Cdd:PRK12644 308 VLVGIGtrdaaLAGLAM--LLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGF 384
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 306960157 362 YSKDLILDIV----NLDWLNLMIFYLFFFSTGLTASYTFRLFY 400
Cdd:PRK12644 385 VAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
56-366 |
8.81e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 136.88 E-value: 8.81e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 56 DWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVK 135
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 136 SYSAGMLTALINRIGDVAILFSISWML-----NFGSWNYLYYYNFV--INSFEMKIITMLVIL-ASMTSSAQIPFSSWLP 207
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLLhvitgTYDIATILQDSELIenIKGHPLFLITLILIFiGAAAKSAQGPFYIWLP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 208 AAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNfGWFLLL--IGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM 285
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 286 MGIL--------AMGFLKLTfFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPF 357
Cdd:PRK12649 318 MTMYgyttyhepGLGVAAAT-FHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*....
gi 306960157 358 LAGFYSKDL 366
Cdd:PRK12649 396 LNGFLSKEM 404
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
394-567 |
6.65e-33 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 124.20 E-value: 6.65e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 394 YTFRLFYYLMFGYTGLCTFFSFNDKNYYISFGMLGLLLATIFGGSLLSWLIFPVPYLVVLPFYLSSLVILVVVIGFYFGY 473
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 474 YISDLKISFTLFSLKYNlLGGFMNLMWFMPYLSTKFIINLPMKMGFTYYKNFDCSWGEHFGGQGLYSLFIYFLDYIQSCY 553
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFN-LHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170
....*....|....
gi 306960157 554 DYNFKSYFMLFISW 567
Cdd:pfam06455 160 KGLIKIYLLSFLLW 173
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-405 |
1.11e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 122.30 E-value: 1.11e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 188 LVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRF------GPLLSLFNFGWFLLLIGCLTMFMSG 261
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfgGDFRFALGLGWLLAVLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 262 IGANFEFDLKKIIALSTLSQLGLMMGILAMG---FLKLTFFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLM 338
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILLGLALLtplALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRM 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 306960157 339 PLTSICFNVSSLSLCGLPFLAGFYSK-DLILDIVNLDWLNLMIfyLFFFSTGLTASYTFRLFYYLMFG 405
Cdd:PRK08375 366 PLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLA--VLLASSLLALLYFLRIWYRAFFG 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
51-367 |
4.47e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 115.98 E-value: 4.47e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYYSEDY---MEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCL 127
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 128 VIY-FQNVKSYSAGMLTALINRIGDVAI-LFSISWMLNFGSWNY-LYYYNFVINSFemkiITMLVILASMTSSAQIPFSS 204
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFELsPLGASAGILSL----VFLLLFLGFGIKAGIIPFHK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 205 WLPAAM-AAPTPVSALVhSSTLVTAGIYLLIRFgpLLSLFN----FGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTL 279
Cdd:PRK08667 227 WLPYAHpASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSpelwWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 280 SQLGL-MMGI-------------LAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDsQDIRFMGSMVYLMPLTSICF 345
Cdd:PRK08667 304 ENIGIiLMGIglyvifgvygldtLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|..
gi 306960157 346 NVSSLSLCGLPFLAGFYSKDLI 367
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLL 404
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
58-317 |
1.82e-25 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 110.17 E-value: 1.82e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 58 MSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKsy 137
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 138 sAGMLTA----LINRIGDVAIL--FSISWmLNFGSWNY---LYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPA 208
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLaaAALAY-LEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 209 AMAAPTPVSALVHSStLVTAGIYLLIRFGPLLSLFNFG-WFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMG 287
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260 270
....*....|....*....|....*....|
gi 306960157 288 ILAMGFLKLTFFHLLTHAFFKALLFMCAGS 317
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-367 |
6.28e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 108.65 E-value: 6.28e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 56 DWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNV- 134
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 135 KSYSAGMLTALINRIGDVAILFSISWML-NFGSWNYLYY-YNFVINSFEMKIITMLVILASMT-SSAQIPFSSWLPAAM- 210
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 211 AAPTPVSALVHSSTLvtAGIYLLIR-----FGPLLSLFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM 285
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 286 M-----GILAMGFLKLT----------FFHLLTHAFFKALLFMCAGSMIHNLkDSQDIRFMGSMVYLMPLTSICFNVSSL 350
Cdd:PRK08376 327 LlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330
....*....|....*..
gi 306960157 351 SLCGLPFLAGFYSKDLI 367
Cdd:PRK08376 406 AIVGLPPFNGFASKWLI 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-404 |
6.29e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 108.37 E-value: 6.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 60 LIFMSFVMYISALVIYYSEDYMEGE--SNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSY 137
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 138 SAGMLTALINRIGDVaILFSISWMLNFGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVS 217
Cdd:PRK06589 166 SGGYKYLKILMISAL-LLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 218 ALVHSSTLVTAGIYLLIR-------FGPLLSLFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMG--- 287
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsaf 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 288 ILAMGFLKLTFFHLLTHAFFKALLFMCAGSmIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLI 367
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 306960157 368 LDIV---NLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMF 404
Cdd:PRK06589 404 LLAAseqNQPWLSIIVMLVVIASSILSALYLLKILSSIYK 443
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
96-390 |
1.52e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 108.05 E-value: 1.52e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 96 LFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKS-YSAGMLTALINRIGDVAILFSISWML-NFGSWNYLYYY 173
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 174 NFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIYLLIRFGPLL---SLFNFGWFL 249
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 250 LLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM-MGI-LAMGF----------LKLT--FFHLLTHAFFKALLFMCA 315
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfVGLgLAMVFiaygmpllaaLALTaaLYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960157 316 GSMIHNLKdSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKdlildivnldWLnlmIFYLFFFSTGL 390
Cdd:PRK06521 360 GAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE----------WL---LLQSLLSSPGL 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-447 |
1.09e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 104.67 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYF 131
Cdd:PRK12667 77 VYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYY 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 132 QNVK-SYSAGMLTALINRIGD------VAILFSISWMLNFGSW---NYLYYYNFVINSFEMKIITMLVILASMTS----- 196
Cdd:PRK12667 157 RDRGdAVEAAIKYALIGAVGTtlyflaLAFLYATFGTLNMADLsakIRGLSFPLTGGLAGNPPLALGVALALALWaftik 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 197 SAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIYLLIR-----FGPLLSL----FNFGWFLLLIGCLTMFMSGIGANF 266
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytiFGISPSLidfrAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 267 EFDLKKIIALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLMPLTSI 343
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASF 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 344 CFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTgLTASYTFRLFyYLMFGYTGLCTFFSFNDKNYYIS 423
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAW-YSLFFGKPKSGEEVEHKESPSMS 472
|
410 420
....*....|....*....|....
gi 306960157 424 FGMLGLLLATIFGGSLLSWLIFPV 447
Cdd:PRK12667 473 VVILVLALAVLILGILALFLPEIL 496
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
63-400 |
1.59e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 98.44 E-value: 1.59e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 63 MSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGML 142
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 143 TA-LINRIGDVAILFSISWMLNF-GSWNY--LYYY--NFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPV 216
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFsdLAAWaaTANLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 217 SALvHSSTLVTAGIYLLIRFGPLLSLFNFGW-FLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLK 295
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 296 LTFFHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYS-KDLILDIVNLD 374
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVS 412
|
330 340
....*....|....*....|....*.
gi 306960157 375 WLNLMIFYLFFFSTGLTASYTFRLFY 400
Cdd:PRK07390 413 PWLVGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
61-408 |
7.88e-21 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 95.99 E-value: 7.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 61 IFMSFVMYISALVIYYSEDYMEGESnMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAG 140
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEAS 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 141 MLTALINRIGDVAILFSISWMLN-FGSWNYLYYYNFV--INSFEMKIITMLVILASMTSSAQIPFSSWLPAA-MAAPTPV 216
Cdd:PRK08377 161 MKYIVLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAgtIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAyQAAPHPI 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 217 SALVhSSTLVTAGIYLLIRFGPLLSLFN----FGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMG 292
Cdd:PRK08377 241 TVMF-SAFVVKAGLYAMARILYLMQNANgwssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALG 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 293 F---LKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGsMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILd 369
Cdd:PRK08377 320 TqagVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII- 397
|
330 340 350
....*....|....*....|....*....|....*....
gi 306960157 370 IVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTG 408
Cdd:PRK08377 398 LAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEG 436
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
84-368 |
3.30e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 90.78 E-value: 3.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 84 ESNMNR-FVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISwml 162
Cdd:PRK07234 89 ESAKTRfFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAV--- 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 163 nfgswnYLYYYNfviNSFEMKIITM-------LVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIR 235
Cdd:PRK07234 166 ------LVYQAN---GTFAFSGLATadpeafaLIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 236 FGPLLslFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLG-LMMGILAMGFLKLTffhlltHAFFKALLFMC 314
Cdd:PRK07234 237 CALDV--PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGfILAAPLVGGLYALA------HGLVKSTLFLC 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 306960157 315 AGSmIHNLKDSQDIRFMGSMVYLMPLTsicfnVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK07234 309 AGA-LPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTL 356
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
18-405 |
5.68e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 87.36 E-value: 5.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 18 GMLVMFFGVLYLFLDYSVFI--ELELFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYmeGESNMNRFVMIIL 95
Cdd:PRK08668 28 GVIGNALPLLFLIKLYFTLKvgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFAL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 96 LFILSMIFLIVSPNLISILLGWDGLGLVSYcLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMLN-FGSWNYLYYYN 174
Cdd:PRK08668 106 MSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQ 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 175 FVIN--SFEMK-IITMLVILASMTSSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGIY-------------LLIRFG 237
Cdd:PRK08668 185 GLINdtSTGFAlIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYgfllvlyvlpgtkLFSEFG 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 238 PLLSLFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLG-LMMGILAMGFLKLT--FFHLLTHAFFKALLFMC 314
Cdd:PRK08668 264 TYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGyILVGLGLGTSLGFAggLFHVFNHALFKGLFFLI 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 315 AGSMIHNLKDSQdIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTGLTAsY 394
Cdd:PRK08668 344 FAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFL-Y 421
|
410
....*....|.
gi 306960157 395 TFRLFYYLMFG 405
Cdd:PRK08668 422 VFRPLAGVFLG 432
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
41-317 |
2.57e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 85.09 E-value: 2.57e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 41 LFDLNGSMVVMTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRF--VMIILLFILSMIFLIVSPNLISILLGWD 118
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYfaLFTFTTGFASLAWLSGDLRLMALCWGAT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 119 GLGLVSYCLVIYFQNVKSYSAGMlTALINRIGDVAILFSISWM-LNFGSWNY---LYYYNFV-INSFEMKIITMLVILAS 193
Cdd:PRK08601 136 LLGLTLLIGLNKGWKVAREAAKI-SGMLFLISWLALALAIVWLfIATGEWQLtsvLSNENLAqLGTWEKTGINLLLILAV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 194 MTSSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGIYLLIRFGPLLS-------LFNFGWFLLLIGcltmfmSGIGAnF 266
Cdd:PRK08601 215 MIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHddiaqilLLIFASISVLIG------TGISL-V 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 306960157 267 EFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGS 317
Cdd:PRK08601 287 QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
201-405 |
1.04e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 79.74 E-value: 1.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 201 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGIYLLIRFGplLSLF-----NFGWFLLLIGCLTMFMSGIGANFEFDLKKII 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFA--LPLFpeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 275 ALSTLSQLGLM-MGILAMGFLKLT--FFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLMPLTSICFNVSSLS 351
Cdd:COG1008 304 AYSSVSHMGFVlLGIFALNPLGLQgaVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALA 382
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 306960157 352 LCGLPFLAGFYSKDLILdivnldwlnLMIFYLFF-------FSTGLTASYTFRLFYYLMFG 405
Cdd:COG1008 383 SLGLPGTSGFVGEFLVL---------LGAFQVNPwlailaaLGLILTAAYLLWMYQRVFFG 434
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
110-405 |
1.14e-15 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 79.94 E-value: 1.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 110 LISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISWMlnfgswnYLYYYNFVINSF--EMKIITM 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLH-------YAETGSFAFGAIagLGGTAAW 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 188 LVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPllslfnfGWFLLLIGCLTMFMSGIG-ANF 266
Cdd:PRK12668 188 LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-------GTELLIYIGAAMAVYGVFfALL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 267 EFDLKKIIALSTLSQLGLMM---GI-LAMGfLKLTFFHLLTHAFFKALLFMCAGSMIHNLKDSqDIRFMGSMVYLMPLTS 342
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVagiGIgTALA-INGAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTA 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960157 343 ICFNVSSLSLCGLPFLAGFYSKDLILDIV---NLDWLNLMifyLFFFSTGLTASYTFRLFYYLMFG 405
Cdd:PRK12668 339 LFCLVGALSISAFPLFSGFVSKSMIISAAgedHYVWVWLL---LLLASAGTFLHFGIKLPYFAFFG 401
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
52-364 |
2.70e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 78.62 E-value: 2.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEGEsNMNR--FVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLV- 128
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 129 IYFQNVKSYSAGMLTALINRIGDVAILFSISWMLNF-GSWNYLYYYNFVINSFEMK---IITMLVILASM---TSSAqiP 201
Cdd:COG1007 144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGAtGSLNLAGIAAALAAGGANSpllLLGLVLVLAGLafkLSAV--P 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 202 FSSWLP-AAMAAPTPVSALVhsSTLV-TAGIYLLIR-FGPLLSLFNFGWFLLL--IGCLTMFMSGIGANFEFDLKKIIAL 276
Cdd:COG1007 222 FHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVKRMLAY 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 277 STLSQLG-LMMGILAMGFL--KLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLC 353
Cdd:COG1007 300 SSIAHAGyLLLGLAAGTPLgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLA 379
|
330
....*....|.
gi 306960157 354 GLPFLAGFYSK 364
Cdd:COG1007 380 GIPPTAGFFGK 390
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
56-436 |
4.84e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.43 E-value: 4.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 56 DWMSLIFMSFVMYISALVIYYSedYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQNVK 135
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 136 SYSAGMLTALINRIGDVAILFSISWM--LNFGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMA-A 212
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 213 PTPVSALVhSSTLVTAGIYLLIRFGplLSLF-----NFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGL-MM 286
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFN--LPLFpdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 287 GILAMGFLKLT--FFHLLTHAFFKALLFMCAGsMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSK 364
Cdd:TIGR01972 311 GIFSFNELGISgaVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 306960157 365 DLILdiVNLDWLNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSFNDKNYYiSFGMLGLLLATIFG 436
Cdd:TIGR01972 390 FLIL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGR-EIAVLAPLVVLILF 458
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
181-368 |
1.39e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 66.90 E-value: 1.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 181 EMKIITMLVILASMTSSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLlsLFN-----FGWFLLLIGCL 255
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTL--LFPqerelLHPLLATMAAI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 256 TMFMSGIGANFEFDLKKIIALSTLSQLGLM-MGILAMGFLKL--TFFHLLTHAFFKALLFMCAGSMIHnLKDSQDIRFMG 332
Cdd:PRK12663 282 TMVIGALGALAYKDIRRIAGYQVISSIGFIlLGLALGTPAGIngAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLG 360
|
170 180 190
....*....|....*....|....*....|....*.
gi 306960157 333 SMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK12663 361 GLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-361 |
3.22e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 66.00 E-value: 3.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 200 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRF---GPLLSLFnFGWFLLLIGCLTMFMSGIGANFEFDLKKIIA 275
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLsllGGNAPLW-WGVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 276 LSTLSQLGLMM---------------GILAMGFLKlTFFHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPL 340
Cdd:PRK08042 275 YHTLENIGIILlglgagvtgialeqpALIALGLVG-GLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPV 352
|
170 180
....*....|....*....|.
gi 306960157 341 TSICFNVSSLSLCGLPFLAGF 361
Cdd:PRK08042 353 ISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-367 |
3.52e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 65.74 E-value: 3.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 152 VAILFSISWMLNFGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGI 230
Cdd:PRK07691 178 VAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGV 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 231 YLLIRFGPLLSLFNFGW---FLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM-MGILAMGFLKLT--FFHLLTH 304
Cdd:PRK07691 257 YAIARTFTLFFSHDTSFthyLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGVAMMTESGMIgaIYYLIHD 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 306960157 305 AFFKALLFMCAGSMIHnLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLI 367
Cdd:PRK07691 337 MIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFI 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
145-368 |
1.54e-10 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 63.68 E-value: 1.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 145 LINRIGDVAILFSISWM-----LNFGSWNYLYYYNFVInSFEMKIITMLVILASMTSSAQI-PFSSWLP-AAMAAPTPVS 217
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPL-PPGVQYWLFLAFFIAFAVKMPMfPLHTWLPdAHVQAPTAGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 218 ALvHSSTLVTAGIYLLIRFGplLSLF-----NFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLG-LMMGILAM 291
Cdd:PRK05846 247 VL-LAGILLKMGAYGLLRFS--LPLFpdashEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAG 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960157 292 GFLKLT--FFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:PRK05846 324 NQLGIQgaIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
52-364 |
4.13e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 62.15 E-value: 4.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 52 TLIFDWMSLIFMSFVMYISALVIYYSEDYMEgESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIY- 130
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 131 FQNVKSYSAGMLTALINRIGDVAILFSISWMLNF-GSWNYLYYYNFVINSFEMK------IITMLVILASMTSSAqiPFS 203
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSllllfgLVFLLVGLAFKLSAV--PFH 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 204 SWLPAAM-AAPTPVSALVHSSTLVTAgiyllirFGPLLSLFNFG---------WFLLLIGCLTMFMSGIGANFEFDLKKI 273
Cdd:PRK05777 225 MWTPDVYeGAPTPVTAFLATAPKIAA-------FAVLLRLLVVAfgglsedwqQVLAIIAIASMLVGNLAALSQTNIKRL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 274 IALSTLSQLG-LMMGILAMGFLKL--TFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSL 350
Cdd:PRK05777 298 LAYSSIAHAGyLLVGLAAGTAEGYsaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFML 377
|
330
....*....|....
gi 306960157 351 SLCGLPFLAGFYSK 364
Cdd:PRK05777 378 SLAGIPPTAGFWGK 391
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
56-364 |
5.50e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.94 E-value: 5.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 56 DWMSLIFMSFVMYISALVIYYSEDYME-GESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYF-QN 133
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 134 VKSYSAGMLTALINRIGDVAILFSISWM--LNFGSWNYLYYYNFVINSFEMKIITMLVILASMT-----SSAQIPFSSWL 206
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 207 PAAM-AAPTPVSALVhSSTLVTAGIYLLIR-FGPLLSLFNFGWFLLL--IGCLTMFMSGIGANFEFDLKKIIALSTLSQL 282
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 283 G-LMMGILAmGFLKLTFFHLLTHAFFkaLLFMCAGS----MIHNLKDSQD-IRFMGSMVYLMPLTSICFNVSSLSLCGLP 356
Cdd:CHL00049 317 GyVIIGIIV-GDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIP 393
|
....*...
gi 306960157 357 FLAGFYSK 364
Cdd:CHL00049 394 PLAGFFGK 401
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
198-364 |
5.57e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 61.91 E-value: 5.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 198 AQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGIYLLIRFGPLL----SLFNFgwfLLLIGCLTMFMSGIGANFEFDLKK 272
Cdd:PRK12665 224 AVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfpggGLDTL---LMVVALLTMVVGILGAIAQSDIKR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 273 IIALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGsMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSS 349
Cdd:PRK12665 300 LLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPA 378
|
170
....*....|....*
gi 306960157 350 LSLCGLPFLAGFYSK 364
Cdd:PRK12665 379 LNLGGIPPFSGFIGK 393
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-368 |
1.57e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 60.33 E-value: 1.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 201 PFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRF-----GPLLSLFnFGWFLLLIGCLTMFMSGIGANFEFDLKKII 274
Cdd:PRK06458 232 PMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYyilidAAIGSDF-PGRLLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 275 ALSTLSQLGLMMGILAMGFLKLTF---FHLLTHAFFKALLFMCAGSMIHNlKDSQDIRFMGSMVYLMPLTSICFNVSSLS 351
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLGALA 388
|
170
....*....|....*..
gi 306960157 352 LCGLPFLAGFYSKDLIL 368
Cdd:PRK06458 389 IAGMPPFGVFISEFLIL 405
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-402 |
6.79e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 58.59 E-value: 6.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 27 LYLFLDYSVFIELELFDLNGSmvvmTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMnrfvMIILLFILSMIFLIV 106
Cdd:PRK12664 10 LYGFFFGLIFIVLPLLLYDWS----EPVYNLDLVLFIVLSFSLALIFLYILPIKNMRFSEM----LCYLLYYISSIAAIS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 107 SPNLISILLGWDGLGLVSYCLVIYFQNVKSYSAGMLTALINRIGDVAILFSISwmlnfgswnylyyyNFVINSFEMKIIT 186
Cdd:PRK12664 82 SSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGAS--------------GQAQNGQYTGYCK 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 187 MLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGIYLLIrfgpLLSLFNFGWFLLLIGCLTMFMSGIGANF 266
Cdd:PRK12664 148 LLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILLFLGIITAIYGIIFASL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 267 EFDLKKIIALSTLSQLGLMmgILAMGFL-------KLTFFHLLTHAFFKALLFMCAGSMIHNLKDSQDIRFMGsmVYLMP 339
Cdd:PRK12664 222 EQNIRRLLCYNVVGQMGLL--IIAIGFSgssgvaiGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGG--LFKMS 297
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 306960157 340 LTSICFNVSSLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFF--FSTGLTASYTFRLFYYL 402
Cdd:PRK12664 298 LEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYA 362
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
20-368 |
9.79e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 57.65 E-value: 9.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 20 LVMFFGVLYLFLDYSVFIELELFDLNGSMVVMtLIFDWMSLIFMSFVMYISALVIYYSEDYMEGE-SNMNRFVMIILLFI 98
Cdd:TIGR01770 34 LKNLSYIVLLSALVSLFLTLQYAAYLFTGFSF-FIVDNFALLIKLILLLSTLLTFFFALSYLSKEkINKFEFYILLLFAL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 99 LSMIFLIVSPNLISILLGWDGLGLVSYCLVIY-FQNVKSYSAGMLTALINRIGDVAILFSISWMLNF-GSWNY----LYY 172
Cdd:TIGR01770 113 LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLkRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFedllLFL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 173 YNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFNFGW--FL 249
Cdd:TIGR01770 193 SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWqiFL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 250 LLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLG-LMMGILAMGF--LKLTFFHLLTHAFFKALLFMCAGSM-IHNLKDS 325
Cdd:TIGR01770 273 AIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGyILIGLLAGTLegIKAVLFYIFIYALMSLGAFGVLSLLrSYKDEWI 352
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 306960157 326 QDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:TIGR01770 353 EYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVF 395
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-404 |
1.48e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 1.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 54 IFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQN 133
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 134 VKSYSAGMLTALINRIG------DVAILFSISWMLNFGSWnYLYYYNFVINSFeMKIITMLVILASMTSSAQIPFSSWLP 207
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMGDM-FLIIQDLPTNRA-IQIGVLFIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 208 AAMAAPTPVSALVHSSTLVTAGIYLLIR-----FGPLLSLFN--FGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLS 280
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTlpFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 281 QLG---LMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSMIHNLkDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPF 357
Cdd:PRK12662 314 HIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 306960157 358 LAGFYSKDLILD--IVNLDWLNLMIFYLfffSTGLTASYTFRLFYYLMF 404
Cdd:PRK12662 393 TSGFVAKWYILDafIKSNAWIGLVVLLV---GSGLSVIYVWKIVEALYF 438
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
197-399 |
3.27e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 56.30 E-value: 3.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 197 SAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFGPLLS-----------LFNFGWFLLLIGCLTMFMsgiga 264
Cdd:PRK08676 220 SGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgaaeqfsnvLIGLGIFSIAVAAFSMLS----- 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 265 nfEFDLKKIIALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGsMIHNLKDSQDIRFMGSMVYLMPLT 341
Cdd:PRK08676 294 --QRNLKKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVA 370
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 342 SICFNVSSLSLCGLPFLAGFYSKDLILDIVN--LDWLNLMIFYLFFFSTGLTASYTFRLF 399
Cdd:PRK08676 371 AWGVILGSAAIIGMPPFPLFLSKFFILLQLGgiSVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-369 |
2.26e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.23 E-value: 2.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 201 PFSSWLPAA-MAAPTPVSALVHSSTLVtaGIYLLIR-----FGP---LLSLFNFGWfLLLIGCLTMFMSGIGANFEFDLK 271
Cdd:PRK12666 228 PLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRlstllFGPeagASAGFGQDW-LLPGGLATLAFGAIGVLAAQRLR 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 272 KIIALSTLSQLGLMMGILAMGFLKLT---FFHLLTHAFFKALLFMCAGSM----------------IHNLKDSQDIRFMG 332
Cdd:PRK12666 305 RLAAYLVLVSSGTLLAAIGLGNPAATaaaLYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLYDLDEEEEEEVGV 384
|
170 180 190
....*....|....*....|....*....|....*..
gi 306960157 333 SMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILD 369
Cdd:PRK12666 385 AIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQ 421
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-364 |
2.27e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.42 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYyseDYMEGESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIY 130
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIA 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 131 FQNVKSYSAGMLTALINRIGDVAILFSISWMLNF-GSWNYLYYYNFVINSFEMKIITM---LVILASMTSSAQIPFSSWL 206
Cdd:PRK06277 143 SGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSPVIYGgllLLIFGLLYGSGLPPFHTIK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 207 PAAMAAPTP-VSALVHSS---TLVTAGIYLLIRFGPLLSLFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQL 282
Cdd:PRK06277 223 SDIYAKAKPfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQG 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 283 GLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGSmIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLA 359
Cdd:PRK06277 303 GYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFN 381
|
....*
gi 306960157 360 GFYSK 364
Cdd:PRK06277 382 GFQSK 386
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
164-411 |
3.55e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 49.20 E-value: 3.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 164 FGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSlf 243
Cdd:MTH00200 73 GGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN-- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 244 nfGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGflklTFFHLLThaFFKALLFMCAGSMIHNLK 323
Cdd:MTH00200 151 --SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLY--LLLYVIITLTVFLLLNLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 324 DSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILdivnldwLNLMIFYLFFFSTGLTASYTFRLFYYLM 403
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSLLSLFFYLR 295
|
....*...
gi 306960157 404 FGYTGLCT 411
Cdd:MTH00200 296 LSYLTLLT 303
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
56-364 |
1.51e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 47.74 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 56 DWMSLIFMSFVMYISALVIYYSEDYME-GESNMNRFVMIILLFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQ-N 133
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVEqSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKrD 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 134 VKSYSAGMLTALINRIGDVAILFSISWM--LNFGSWNYLYYYNFVINSFEMKIITMLVILASMTSS--AQIPFSSWLPAA 209
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSLLygLSGGSTQLSAIALALITSPSLGLALALVFVIAGIAFkiSAVPFHQWTPDV 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 210 M-AAPTPVSALVhSSTLVTAGIYLLIRF-GPLLSLFNFGWFLLL--IGCLTMFMSGIGANFEFDLKKIIALSTLSQLG-L 284
Cdd:PRK02504 237 YeGSPTPVVAFL-SVGSKAAGFALAIRLlVTAFPSFDEQWKLLFtaLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGfV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 285 MMGILA---MGFLKLTFFhLLTHAFFKALLFMCAgsMIHNLKDSQDIRFMGSMVYLM-PLTSICFNVSSLSLCGLPFLAG 360
Cdd:PRK02504 316 MIGLVAgteAGYASMVFY-LLAYLFMNLGAFACV--ILFSLRTGTDQISDYAGLYQKdPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 306960157 361 FYSK 364
Cdd:PRK02504 393 FFGK 396
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
62-361 |
4.74e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.32 E-value: 4.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 62 FMSFVMYISALVIYYSEDYMEGESNMNRFVMIILLF-ILSMIFLIVSPNLISILLGWDGLGLVSYcLVIYFQNVKSYSAG 140
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSY-VAIALTKKNKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 141 MLTALINrigdvailFSISWMLNFGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPF--SSWLPAAMAAPTPVSA 218
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 219 LVHSSTLVTAGIYLLIR---FGPLLSLFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALST-------LSQLGLMM-- 286
Cdd:PRK06459 196 AILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTienngaiLVALGLYMvt 275
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 306960157 287 ----GILAMGFLKLTFFHLLTHAFFKALLFMCAGSMihnlkDSQDIRFMGSMVYLMplTSICFNVSSLSLCGLPFLAGF 361
Cdd:PRK06459 276 kqliTSIEHFSLITVILYSFAHSVAKTGLFLSSGLQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGG 347
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
60-427 |
5.37e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 46.07 E-value: 5.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 60 LIFMSFVMYISALVIYYSEDYMegeSNMNRFVMIILLFILSMIFLIVSPNLISILlgWDGLGLVSYCLV-IYFQNVKSYS 138
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYL---TKSFLICMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLILgIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 139 AGMLTALINRIGDVAILFSISWMLNF-GSWNYLYYY--NFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTP 215
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIhGTTDYLTLAscSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPV 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 216 VSALVHSSTLVTAGIYLLIRFG-PLLSLF--NFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM-MGILAM 291
Cdd:MTH00226 263 AGSVLLAGILLKLGGYGLVRLSwPILPLGaqNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVsITLVTH 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 292 GFLKLT--FFHLLTHAFFKALLFMCAgSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLILd 369
Cdd:MTH00226 343 DIIGLTgsIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI- 420
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 370 IVNLDWlNLMIFYLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFS--FNDKNYYISFGML 427
Cdd:MTH00226 421 LSSFNW-NPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFArdVNRREFYITASMV 479
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
186-369 |
1.13e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.43 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 186 TMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGPLLSLFnfgwFLLLIGCLTMFMSGIGAN 265
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 266 FEFDLKKIIALSTLSQLGLMMGILAMGfLKLTFFHLLTHAFFKALLFMcagsMIHNLKdSQDIRFMGSMVYLMPLTSICF 345
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 306960157 346 NVSSLSLCGLPFLAGFYSKDLILD 369
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
96-368 |
5.73e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 42.32 E-value: 5.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 96 LFILSMIFLIVSPNLISILLGWDGLGLVSYCLVIYFQN-VKSYSAGMLTALINRIGDVAILFSISWMLNFGSWNYLYYYN 174
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 175 FVIN------SFEMKIITMLVILASMTSSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGIY-LLIRFGPLLSlfnfg 246
Cdd:MTH00196 81 LVLNsgqsfsSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGIFsILVSIGLNVN----- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 247 wFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKlTFFHLLTHAFFKALLFMCAGSMIHNLKDSQ 326
Cdd:MTH00196 154 -ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFE-SIQASLVYLFIYIIMSICVFSIILALNVYK 231
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 306960157 327 D--IRFMGsMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKDLIL 368
Cdd:MTH00196 232 NliIEFSG-LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
149-447 |
1.34e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.59 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 149 IGDVAILFSISWML-NFGSWNYLYYYNFVINSFEMKIITMLVILASMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 227
Cdd:MTH00204 174 AGSVFMLLGIFQLYsITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 228 AGIYLLIRFG-PLLSLFNFGW--FLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLM-MGILA--MGFLKLTFFHL 301
Cdd:MTH00204 254 LGGYGFLRFSwPLFPAASEYFapLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVpLGLFThtIEGLVAAVFLM 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 302 LTHAFFKALLFMcAGSMIHNLKDSQDIRFMGSMVYLMPLTSICFNVSSLSLCGLPFLAGFYSKdlILDIVNLDWLNLMIF 381
Cdd:MTH00204 334 LAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE--FFSLLAAFEYSLGLG 410
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 306960157 382 YLFFFSTGLTASYTFRLFYYLMFGYTGLCTFFSfNDKNYYISFGMLGLLLATIFGGSLLSWLIFPV 447
Cdd:MTH00204 411 VLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFS-RDLNRRELLAILPLIIAIFLLGIVPFIIIDLV 475
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
51-90 |
1.50e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 36.64 E-value: 1.50e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 306960157 51 MTLIFDWMSLIFMSFVMYISALVIYYSEDYMEGESNMNRF 90
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
201-363 |
1.51e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.17 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 201 PFSSWLPAAMA-APTPVSALVhSSTLVTAGIYLLIRFGplLSLF-----NFGWFLLLIGCLTMFMSGIGANFEFDLKKII 274
Cdd:PRK12561 203 PLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFN--VQMLpdahvYFAPALAILGVVNIIYGALNAFAQDNVKRRL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 275 ALSTLSQLG-LMMGILAMGFLKLT--FFHLLTHAFFKALLFMCAGSMIHNLKdSQDIRFMGSMVYLMPLTSICFNVSSLS 351
Cdd:PRK12561 280 AYSSVSHMGfVLLGIAAFTDLGISgaMLQMISHGLIAAALFFLTGVTYERTH-TLSIPNMGGLAKVMPKTFALFTASSMA 358
|
170
....*....|..
gi 306960157 352 LCGLPFLAGFYS 363
Cdd:PRK12561 359 SLALPGMSGFVS 370
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
200-405 |
5.00e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 39.68 E-value: 5.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 200 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGIYLLIRFGplLSLFNFGW-----FLLLIGCLTMFMSGIGANFEFDLKKI 273
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFG--VGLFPEAWvylapWLATWAVVSVLYGASCAIAQKDMKKM 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 274 IALSTLSQLG-LMMGILAMGFLKLT--FFHLLTHAFFKALLFMCAGsMIHNLKDSQDIRFMGSMVYL---MPLTSICFNV 347
Cdd:PRK06473 299 VAYSSIGHMGyILLAAAAATPLSILaaVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNPergLPITGSLMIL 377
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 306960157 348 SSLSLCGLPFLAGFYSKDLIL----DIVNLDWLNLMIfylfffSTGLTASYTFRLFYYLMFG 405
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLVFrgsfPIFPVQTLLCMI------GTGLTAVYFLLLVNRVFFG 433
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
200-361 |
5.18e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 39.70 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 200 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGIYLLIRFGplLSLFNFGWFLL-----LIGCLTMFMSGIGANFEFDLKKII 274
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglaIIGTISVIYGALSAIAQKDIKRMV 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 275 ALSTLSQLGLMMGILAMGF---LKLTFFHLLTHAFFKALLFMCAGSMIHNL--KDSQDIRFMGSMVYLMPLTSICFNVSS 349
Cdd:PRK07363 300 AYSSIGHMGYILVAAAAGTqlsLLGAVAQMISHGLILALLFHLVGIVERKVgtRDLDVLNGLMNPIRGLPLTSALLVLAG 379
|
170
....*....|..
gi 306960157 350 LSLCGLPFLAGF 361
Cdd:PRK07363 380 MASAGIPGLVGF 391
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
239-445 |
8.82e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 38.65 E-value: 8.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 239 LLSLFNFGWFLLLIGCLTMFMSGIGANFEFDLKKIIALSTLSQLGLMMGILAMGFLKLTFFHLLTHAFFKALLFMCAGSM 318
Cdd:MTH00160 136 LLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFN 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960157 319 IHNLKDSQDIRFMGSMVYLMPLTSIcfnvssLSLCGLPFLAGFYSKDLILDIVNLDWLNLMIFYLFFFSTgLTASYTFRL 398
Cdd:MTH00160 216 IFFLNQLFNSNNKSKKIKFLLFLNL------LSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRI 288
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 306960157 399 FYYLMFGYTGLCTFFSFNDKNYYISFGMLGLLLaTIFGGSLLSWLIF 445
Cdd:MTH00160 289 SYSSLMLNYNKNKWNLKKKKNKFSLILNFLSFI-SLFGLILSSLLFL 334
|
|
| |
