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Conserved domains on  [gi|306960142|ref|YP_003875557|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Xyleus modestus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.18e-39

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 126.81  E-value: 3.18e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   3 ILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306960142  83 SSNIMVWTMTTMFFITVLLGGLYHEWKQGALKW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.18e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 126.81  E-value: 3.18e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   3 ILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306960142  83 SSNIMVWTMTTMFFITVLLGGLYHEWKQGALKW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.08e-22

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 84.40  E-value: 1.08e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   19 MLIATILSKKSINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIM-VWTMttMFFI 97
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFgFVEM--LIFI 77

                          90
                  ....*....|....*..
gi 306960142   98 TVLLGGLYHEWKQGALK 114
Cdd:pfam00507  78 AILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.89e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.09  E-value: 1.89e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   8 FMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIM 87
Cdd:COG0838   12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                         90       100
                 ....*....|....*....|....*....
gi 306960142  88 -VWTMttMFFITVLLGGLYHEWKQGALKW 115
Cdd:COG0838   91 gLIEM--LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 3.18e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 126.81  E-value: 3.18e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   3 ILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMK 82
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306960142  83 SSNIMVWTMTTMFFITVLLGGLYHEWKQGALKW 115
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 7.53e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 121.12  E-value: 7.53e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   1 MMILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 306960142  81 MKSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWA 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 5.32e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 116.63  E-value: 5.32e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   1 MMILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 306960142  81 MKSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWA 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 3.63e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 109.18  E-value: 3.63e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   1 MMILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 306960142  81 MKSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWA 116
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-116 3.60e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 93.79  E-value: 3.60e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   2 MILSTSFMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIM 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306960142  82 KSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWA 116
Cdd:MTH00113  80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 4.22e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 93.89  E-value: 4.22e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   1 MMILSTSFMISFILPMAIMLIATILSKKSInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 306960142  81 MKSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWAD 117
Cdd:MTH00042  80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-117 3.58e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 91.54  E-value: 3.58e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   2 MILSTSFMISFILPMAIMLIATILSKKSINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIM 81
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 306960142  82 KSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWAD 117
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-117 2.84e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 86.51  E-value: 2.84e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   1 MMILSTSFMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 306960142  81 MKSSNIMVWTMTTMFFITVLLGGLYHEWKQGALKWAD 117
Cdd:MTH00136  80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.08e-22

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 84.40  E-value: 1.08e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   19 MLIATILSKKSINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIM-VWTMttMFFI 97
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFgFVEM--LIFI 77

                          90
                  ....*....|....*..
gi 306960142   98 TVLLGGLYHEWKQGALK 114
Cdd:pfam00507  78 AILLVGLVYAWKKGALE 94
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 1.88e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 84.53  E-value: 1.88e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   8 FMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILP-IIIIMKSSNI 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWL 93

                         90       100       110
                 ....*....|....*....|....*....|
gi 306960142  87 MVWTMttMFFITVLLGGLYHEWKQGALKWA 116
Cdd:PRK06602  94 GFVEA--MIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 1.89e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.09  E-value: 1.89e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   8 FMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIM 87
Cdd:COG0838   12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                         90       100
                 ....*....|....*....|....*....
gi 306960142  88 -VWTMttMFFITVLLGGLYHEWKQGALKW 115
Cdd:COG0838   91 gLIEM--LVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 14-117 2.21e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 81.58  E-value: 2.21e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142  14 LPMAIMLIATILSKKSIN----------DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPI---III 80
Cdd:MTH00069   1 LIMLMLLISTILSLILITisfwlplnnpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQL 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 306960142  81 MKSSNIMVWTMTTMFFITVllgGLYHEWKQGALKWAD 117
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTL---GLIYEWIQGGLEWAE 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 2-115 7.83e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 80.33  E-value: 7.83e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   2 MILSTSFMISFILPMAIMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIM 81
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 306960142  82 KSSNimVWTMTTMFFITVLLGGLYHEWKQGALKW 115
Cdd:MTH00203  81 QLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-115 1.55e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 69.32  E-value: 1.55e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   8 FMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIM 87
Cdd:MTH00018   7 LIFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPF 85

                         90       100
                 ....*....|....*....|....*....
gi 306960142  88 -VWTMTTMFFITVLlgGLYHEWKQGALKW 115
Cdd:MTH00018  86 gFWTMVGFLFILTL--GLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-115 3.27e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 68.58  E-value: 3.27e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   4 LSTSFMISFILPMAIMLIATILSKKS------INDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPI 77
Cdd:MTH00055   1 MSMEFLGIFILLLFSIGLSTVISGASyivgvkQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPW 80

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 306960142  78 IIIMKSSNIM-VWTMttMFFITVLLGGLYHEWKQGALKW 115
Cdd:MTH00055  81 CVVYNQIGLFgFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 8.07e-12

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 57.64  E-value: 8.07e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142  32 DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIM-VWTMTTmfFITVLLGGLYHEWKQ 110
Cdd:MTH00030  40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIK 117


                 ....*
gi 306960142 111 GALKW 115
Cdd:MTH00030 118 GGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-115 3.13e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 48.20  E-value: 3.13e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   2 MILSTSFMISFILPMAIMLIATILSKKSINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIIIM 81
Cdd:PRK07756  10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306960142  82 KssNIMVWTMTTMF-FITVLLGGLYHEWKQGALKW 115
Cdd:PRK07756  89 D--KLGLFALIEMLiFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 3.18e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.27  E-value: 3.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   1 MMILSTSFMISFILPMAIMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIALILPIIII 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306960142  81 MKSSNIMVWTMttMFFItvlLGGLYHEWKQGALKW 115
Cdd:MTH00092  80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 6.48e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 41.97  E-value: 6.48e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142  19 MLIATILSKKSINdREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIALILPIIIIMKSSNIMVWTMTTMFF 96
Cdd:PRK07928  22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFM 100

                         90
                 ....*....|....*....
gi 306960142  97 ITVLLGGLYhEWKQGALKW 115
Cdd:PRK07928 101 LTVFVAYAY-VWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
8-115 7.20e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.96  E-value: 7.20e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306960142   8 FMISFILPMAIMLIATILSKKSIN-DRE--KSSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDVEIALILPIIIIMKS 83
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQkNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306960142  84 SNIMVwtMTTMF-FITVLLGGLYHEWKQGALKW 115
Cdd:PRK08489  95 LGLFG--LIEMLlFIVLLTIGFIYAWKKGALEW 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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