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Conserved domains on  [gi|306486684|gb|ADM93119|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Microcebus griseorufus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.18e-67

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.01  E-value: 1.18e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306486684  81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.18e-67

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.01  E-value: 1.18e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306486684  81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.21e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 104.04  E-value: 2.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   18 VMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKIT-VMMALMLII 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 306486684   97 ILALGLVYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 2.53e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.02  E-value: 2.53e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   3 LPLTLTIDIMLVLVLVM--VAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838    6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 306486684  81 SNNLKITVMMALML-IIILALGLVYEWLQKGLEW 113
Cdd:COG0838   84 FRELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.18e-67

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 199.01  E-value: 1.18e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306486684  81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 3.10e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.39  E-value: 3.10e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLT-LTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 306486684  80 QSNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 8.50e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 146.29  E-value: 8.50e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   3 LPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSN 82
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306486684  83 NLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 1.18e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 138.09  E-value: 1.18e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306486684  81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.95e-40

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 130.10  E-value: 1.95e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306486684  81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-113 4.14e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 113.84  E-value: 4.14e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   5 LTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNl 84
Cdd:MTH00203   6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS- 84

                         90       100
                 ....*....|....*....|....*....
gi 306486684  85 kITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00203  85 -LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.21e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 104.04  E-value: 2.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   18 VMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKIT-VMMALMLII 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 306486684   97 ILALGLVYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 5-115 3.04e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 96.47  E-value: 3.04e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   5 LTLTIDIMLVLVLVMVAFWLPQLNMYA-EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNN 83
Cdd:MTH00148   6 LSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 306486684  84 LKITVMMALMLIIILALGLVYEWLQKGLEWEE 115
Cdd:MTH00148  86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 5-113 3.30e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 96.60  E-value: 3.30e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   5 LTLTIDIMLVLVLVMVAFwlpQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNL 84
Cdd:MTH00202  10 LSILISSLLFLVSWMLSF---RSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWS 86

                         90       100
                 ....*....|....*....|....*....
gi 306486684  85 KITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00202  87 KGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-113 4.60e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 96.00  E-value: 4.60e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   5 LTLTIDIMLVLVLVMVAFWL-PQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNN 83
Cdd:MTH00161   4 IILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 306486684  84 LKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00161  84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 2.53e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.02  E-value: 2.53e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   3 LPLTLTIDIMLVLVLVM--VAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838    6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 306486684  81 SNNLKITVMMALML-IIILALGLVYEWLQKGLEW 113
Cdd:COG0838   84 FRELGWFGLIEMLVfIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-114 3.14e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 86.69  E-value: 3.14e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684  32 EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQSNNLKITVMMALMLiIILALGLVYEWLQKGL 111
Cdd:MTH00055  37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFL-IILTIGLIYEWVKGGL 115


                 ...
gi 306486684 112 EWE 114
Cdd:MTH00055 116 EWE 118
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 8.59e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 82.98  E-value: 8.59e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYA--EKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTAdrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306486684  79 SQSNNLKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 4.15e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 80.88  E-value: 4.15e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 306486684  81 SNNLKITVMMALML-IIILALGLVYEWLQKGLEWE 114
Cdd:MTH00018  79 YNQIAPFGFWTMVGfLFILTLGLIYEWIKGGLEWE 113
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 2.62e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 79.14  E-value: 2.62e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   7 LTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKI 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92

                         90       100
                 ....*....|....*....|....*....
gi 306486684  87 TVMMALMLII-ILALGLVYEWLQKGLEWE 114
Cdd:PRK06602  93 LGFVEAMIFIlVLLVGLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 31-114 2.40e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 74.20  E-value: 2.40e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684  31 AEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKI-TVMMALMLIIILALGLVYEWLQK 109
Cdd:MTH00030  41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKG 118


                 ....*
gi 306486684 110 GLEWE 114
Cdd:MTH00030 119 GLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 20-113 1.74e-13

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 61.54  E-value: 1.74e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684  20 VAFWLPQL----NMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKITVMM-ALML 94
Cdd:CHL00022  23 LAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVSAFIeALIF 100

                         90
                 ....*....|....*....
gi 306486684  95 IIILALGLVYEWLQKGLEW 113
Cdd:CHL00022 101 VLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 6.34e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 55.13  E-value: 6.34e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   7 LTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQSNNLKI 86
Cdd:PRK07756  16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93

                         90       100
                 ....*....|....*....|....*...
gi 306486684  87 TVMMA-LMLIIILALGLVYEWLQKGLEW 113
Cdd:PRK07756  94 FALIEmLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 1.60e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.21  E-value: 1.60e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684  33 KNNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQSNNLKITVMMALMLIII-LALGLVYEWLQK 109
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALFMLtVFVAYAYVWRRG 114


                 ....*
gi 306486684 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-114 2.70e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 45.81  E-value: 2.70e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684  33 KNNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQSNNLKITVMM-ALMLIIILALGLVYEWLQKGL 111
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFGLIeMLLFIVLLTIGFIYAWKKGAL 123


                 ...
gi 306486684 112 EWE 114
Cdd:PRK08489 124 EWQ 126
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-113 1.67e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.34  E-value: 1.67e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 306486684   1 MNLPLTLTIDIMLVLVLVMVAFWLPQLNMYAEKNNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasq 80
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76

                         90       100       110
                 ....*....|....*....|....*....|...
gi 306486684  81 SNNLKITVMMALMLIIILALGLVYEWLQKGLEW 113
Cdd:MTH00092  77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-76 7.86e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.41  E-value: 7.86e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 306486684  36 PYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  40 SFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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