|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
2.00e-70 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 205.94 E-value: 2.00e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106 1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
|
90 100 110
....*....|....*....|....*....|....*
gi 30466125 81 TSNLKLTLTTALALISILTAGLAYEWFQKGLEWEE 115
Cdd:MTH00106 81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
1.60e-50 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 155.46 E-value: 1.60e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTI-TINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00136 1 MNLITTIlTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 30466125 80 QTSNLKLTLTTALALISILTAGLAYEWFQKGLEWEE 115
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
1.12e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 143.21 E-value: 1.12e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 3 LPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTS 82
Cdd:MTH00069 2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81
|
90 100 110
....*....|....*....|....*....|...
gi 30466125 83 NLKLTLTTALALISILTAGLAYEWFQKGLEWEE 115
Cdd:MTH00069 82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
6.67e-45 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 141.17 E-value: 6.67e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00113 1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|...
gi 30466125 81 TSNLKLTLTTALALISILTAGLAYEWFQKGLEW 113
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-115 |
1.63e-36 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 120.09 E-value: 1.63e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00042 2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81
|
90 100 110
....*....|....*....|....*....|....*
gi 30466125 81 TSNLKLTLTTALALISILTAGLAYEWFQKGLEWEE 115
Cdd:MTH00042 82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
3.53e-35 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 116.54 E-value: 3.53e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 5 LTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTSNL 84
Cdd:MTH00203 6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL 85
|
90 100
....*....|....*....|....*....
gi 30466125 85 KLTLttALALISILTAGLAYEWFQKGLEW 113
Cdd:MTH00203 86 SLLL--AFLFLILLTLGLIYEWLQGGLEW 112
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
18-112 |
8.54e-31 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 104.81 E-value: 8.54e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 18 VMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTSNLKLT-LTTALALIS 96
Cdd:pfam00507 1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78
|
90
....*....|....*.
gi 30466125 97 ILTAGLAYEWFQKGLE 112
Cdd:pfam00507 79 ILLVGLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
5-115 |
2.22e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 99.55 E-value: 2.22e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 5 LTITINTLMVAILVMIAFWLPQLNVY-TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTSN 83
Cdd:MTH00148 6 LSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85
|
90 100 110
....*....|....*....|....*....|..
gi 30466125 84 LKLTLTTALALISILTAGLAYEWFQKGLEWEE 115
Cdd:MTH00148 86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
8.58e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 97.93 E-value: 8.58e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 5 LTITINTLMVAILVMIAFWL--PQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTS 82
Cdd:MTH00161 3 LIILLIILLISIILMILASLlsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82
|
90 100 110
....*....|....*....|....*....|.
gi 30466125 83 NLKLTLTTALALISILTAGLAYEWFQKGLEW 113
Cdd:MTH00161 83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
5-113 |
3.36e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 91.59 E-value: 3.36e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 5 LTITINTLMVAILVMIAFwlpQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTSNL 84
Cdd:MTH00202 10 LSILISSLLFLVSWMLSF---RSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWS 86
|
90 100
....*....|....*....|....*....
gi 30466125 85 KLTLTTALALISILTAGLAYEWFQKGLEW 113
Cdd:MTH00202 87 KGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-113 |
1.22e-23 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 87.61 E-value: 1.22e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTITINTLMVAILVMIAFWL--PQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*
gi 30466125 79 IQTSNLKLTLTTALALISILTAGLAYEWFQKGLEW 113
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
12-113 |
1.51e-23 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 87.10 E-value: 1.51e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 12 LMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTSNLKLT-LTT 90
Cdd:COG0838 17 GLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFgLIE 94
|
90 100
....*....|....*....|...
gi 30466125 91 ALALISILTAGLAYEWFQKGLEW 113
Cdd:COG0838 95 MLVFIAILLVGLIYAWKKGALEW 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
31-114 |
1.08e-21 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 82.45 E-value: 1.08e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 31 TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTSNLKLTLTTALALIsILTAGLAYEWFQKG 110
Cdd:MTH00055 36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114
|
....
gi 30466125 111 LEWE 114
Cdd:MTH00055 115 LEWE 118
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
7-114 |
3.84e-21 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 81.06 E-value: 3.84e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 7 ITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTSNLKL 86
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92
|
90 100
....*....|....*....|....*....
gi 30466125 87 T-LTTALALISILTAGLAYEWFQKGLEWE 114
Cdd:PRK06602 93 LgFVEAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
1-114 |
2.55e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 76.25 E-value: 2.55e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQ 80
Cdd:MTH00018 1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78
|
90 100 110
....*....|....*....|....*....|....*
gi 30466125 81 TSNLKL-TLTTALALISILTAGLAYEWFQKGLEWE 114
Cdd:MTH00018 79 YNQIAPfGFWTMVGFLFILTLGLIYEWIKGGLEWE 113
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
31-114 |
3.37e-17 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 71.12 E-value: 3.37e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 31 TEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTSNLKL-TLTTALALISILTAGLAYEWFQK 109
Cdd:MTH00030 41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKG 118
|
....*
gi 30466125 110 GLEWE 114
Cdd:MTH00030 119 GLEWD 123
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
12-113 |
4.18e-12 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 58.07 E-value: 4.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 12 LMVAILVMI-AFWLPQL----NVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTSNLKL 86
Cdd:CHL00022 14 LIISSLIPIlAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91
|
90 100
....*....|....*....|....*...
gi 30466125 87 -TLTTALALISILTAGLAYEWFQKGLEW 113
Cdd:CHL00022 92 sAFIEALIFVLILIVGLVYAWRKGALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
33-114 |
3.84e-10 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 53.14 E-value: 3.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 33 KYNPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWAIQTSNLKLTLTTALAL-ISILTAGLAYEWFQK 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114
|
....*
gi 30466125 110 GLEWE 114
Cdd:PRK07928 115 GLEWD 119
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
32-113 |
1.71e-09 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 51.28 E-value: 1.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 32 EKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWAIQTSNLKL-TLTTALALISILTAGLAYEWFQKG 110
Cdd:PRK07756 41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118
|
...
gi 30466125 111 LEW 113
Cdd:PRK07756 119 LQW 121
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-113 |
5.13e-08 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 47.20 E-value: 5.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 1 MNLPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwaiq 80
Cdd:MTH00092 2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76
|
90 100 110
....*....|....*....|....*....|...
gi 30466125 81 TSNLKLTLTTALALISILTAGLAYEWFQKGLEW 113
Cdd:MTH00092 77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
3-114 |
3.82e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 45.43 E-value: 3.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466125 3 LPLTITINTLMVAILVMIAFWLPQLNVYTEKYNPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTS 82
Cdd:PRK08489 17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFK 93
|
90 100 110
....*....|....*....|....*....|...
gi 30466125 83 NLKL-TLTTALALISILTAGLAYEWFQKGLEWE 114
Cdd:PRK08489 94 LLGLfGLIEMLLFIVLLTIGFIYAWKKGALEWQ 126
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
34-76 |
2.05e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 37.95 E-value: 2.05e-04
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 30466125 34 YNPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060 38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|