|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 787.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 81 QYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 161 LVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 321 LTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 30466122 401 LITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILMGPTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 643.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 81 QYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 161 LVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 321 LTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 30466122 401 LITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILMGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 594.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 81 QYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 161 LVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 321 LTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 30466122 401 LITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.21e-180 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 512.96 E-value: 1.21e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFF-SDPLSSPLLTLAMWLFPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 80 SQYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 160 LLVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 240 GYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 320 GLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 30466122 400 MLITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILMGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
3.15e-168 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 480.98 E-value: 3.15e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 3 KIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFS-DPLSSPLLTLAMWLFPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 82 YHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 162 VALSSIQNYMGTLNLFMMTYWTQEladSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 242 GMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 322 TSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 30466122 402 ITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.95e-151 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 438.26 E-value: 1.95e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLL-NQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 80 SQYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 160 LLVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 240 GYGMMRITIILN-PLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 319 HGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 30466122 399 NMLITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
6.41e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 362.55 E-value: 6.41e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNpmvWINITLHSLTISFTSLSLLNQtDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 81 QyhLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 161 LVALSSIQNYMGTLNLFMMTYWtqeladSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 321 LTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 30466122 401 LITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
38-456 |
5.50e-120 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 356.84 E-value: 5.50e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 38 SLSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMASQYhlAKESLERKKHFLFTLISLQLFLIMTFTATELIM 117
Cdd:MTH00150 2 SLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 118 FYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWsndLMWV 197
Cdd:MTH00150 80 FYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 198 ACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICL 277
Cdd:MTH00150 157 LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMST 357
Cdd:MTH00150 237 RQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 358 WWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLM 437
Cdd:MTH00150 317 WWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
410
....*....|....*....
gi 30466122 438 SMHVFPLLLLTLNPKILMG 456
Cdd:MTH00150 397 LLHWVPLLLLILKSDLLFM 415
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
22-455 |
9.01e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 336.95 E-value: 9.01e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 22 MVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESleRKKHFLFTLIS 101
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK--NSKLFTVSVIM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 102 LQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTY 181
Cdd:MTH00205 97 LLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 182 WTQelaDSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPF 261
Cdd:MTH00205 177 LNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 262 LMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRT 341
Cdd:MTH00205 254 FSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRS 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 342 MFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPPY 421
Cdd:MTH00205 334 MLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSS 413
|
410 420 430
....*....|....*....|....*....|....
gi 30466122 422 HAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00205 414 QISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
1.48e-111 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 336.33 E-value: 1.48e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNnFSSTFFSDPLSSPLLTLAMWLFPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSM-FTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 81 QYHLAKESLErkKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 161 LVALSSIQNYMGTLNLFMMTYWTQELadsWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 241 YGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 321 LTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 30466122 401 LITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKIL 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
1.57e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 252.31 E-value: 1.57e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASqyhlAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWSNdLMWVACIMAFMIKMPLYGLHLWLPK 218
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQL-LLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 298 IVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVG 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 378 ELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILMGP 457
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDL 474
|
.
gi 30466122 458 T 458
Cdd:COG1008 475 I 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
9.83e-72 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 234.45 E-value: 9.83e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASQYHLAKesleRKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 139 QTeRLNAGLYFLFYTLIGSLPLLVALssiqnymgtLNLFMMTYWTQELAD-------SWSNDLMWVACIMAFMIKMPLYG 211
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAI---------LGLYFLGGGTFDLLEllnlplpFGVQTWLFLAFFIAFAVKVPLFP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 212 LHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMV-CLWGMVMTSLICLRQTDLKSLIAYSS 290
Cdd:TIGR01972 222 LHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 291 VSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALP 370
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 371 PSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPP-YHAHNFNPSLTRENTLMSMHVFPLLLLTL 449
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGL 461
|
410
....*....|
gi 30466122 450 NPKILMGPTY 459
Cdd:TIGR01972 462 YPNPLLDLTE 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-458 |
1.21e-70 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 232.02 E-value: 1.21e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASQyhlaKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASW----EEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 139 QTERLNAGLYFLFYTLIGSLPLLVALSSI----QNYMGTLNLfmmTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMV-CLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITlGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 294 MALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 374 NLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKI 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
....*
gi 30466122 454 LMGPT 458
Cdd:PRK05846 473 LLDVI 477
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
93-456 |
8.63e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 226.86 E-value: 8.63e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 93 KHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMG 172
Cdd:MTH00217 109 KEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 173 TLNlfMMTYWTQELADSWSNdLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP 252
Cdd:MTH00217 189 TTD--YQALCCLKIEKELQY-FIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 253 L-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLAN 331
Cdd:MTH00217 266 EaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVT 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 332 SNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYML 411
Cdd:MTH00217 346 FLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 30466122 412 TMTQRGEPPYHAHnFNPSLTRENTLMsmhVFPLLLLTlnpkILMG 456
Cdd:MTH00217 426 NRVCFGAPSKYLY-FSRDLNRREFYV---LLPLVFLI----YLMG 462
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.45e-66 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 215.25 E-value: 1.45e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 112 ATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 192 NDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGMVM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 272 TSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANS-NYERIHNRTMFLARGLQS 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 30466122 351 LLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-410 |
4.03e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 219.93 E-value: 4.03e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 56 FFSDPLSSPLLTLAMWLFPLTIMASQyhlaKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITR 135
Cdd:MTH00204 79 FAVDGVSLFFILLTTLLIPICILISW----KSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 136 WGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQEL-ADSWsndlMWVACIMAFMIKMPLYGLHL 214
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLsIQKW----LLVGFFLSLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPF-LMVCLWGMVMTSLICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 294 MALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSI 373
Cdd:MTH00204 311 MGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSC 390
|
330 340 350
....*....|....*....|....*....|....*..
gi 30466122 374 NLVGELFITMATFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00204 391 NFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-419 |
4.89e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 209.78 E-value: 4.89e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 56 FFSDPLSSPLLTLAMWLFPLTIMASqYHLAKESLerkKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILIS-WHSVKYLT---KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 136 WGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGT---LNLFMMTYWTQELADSWsndlMWVACIMAFMIKMPLYGL 212
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPF 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSV 291
Cdd:MTH00226 250 HIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSV 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 292 SHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:MTH00226 330 AHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 30466122 372 SINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEP 419
Cdd:MTH00226 410 SGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAP 457
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-447 |
3.08e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 165.08 E-value: 3.08e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 102 LQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSsiqnymgtLNLFMMTY 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL--------KNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 182 WTQELADSWsndLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRitiILNPLTKFMAYPF 261
Cdd:MTH00094 143 CYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 262 LMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 342 MFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMTQRGEPPY 421
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
330 340
....*....|....*....|....*.
gi 30466122 422 HAHNFNPSLTRENTLMSMHVFPLLLL 447
Cdd:MTH00094 377 NFNNFNVGLSLPLVFMMFNMFWLSLF 402
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-387 |
2.64e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 157.62 E-value: 2.64e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 52 FSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESLERKKHFLFTLisLQLFLIMTFTATELIMFYILFEATLIPTLI 131
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLL--LLAGMNGAFLTGDLFNLFVFFEVMLLASYG 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 132 IITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWSNdLMWVACIMAFMIKMPLYG 211
Cdd:COG0651 146 LVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 212 LHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI-TIILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYS 289
Cdd:COG0651 224 LHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLgLLTMLVGALGALAQRDLKRLLAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 290 SVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:COG0651 304 SVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGL 383
|
330
....*....|....*...
gi 30466122 370 PPSINLVGELFITMATFS 387
Cdd:COG0651 384 PPLSGFVSKWLLLQAALE 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
8.50e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 157.89 E-value: 8.50e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASQyhlakeSLERKKHFLFTLISLQLFL-IMTFTATELIMFYILFEATLIPTLIIITRWG 137
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASW------KVTRKPRLFYFLMLVLYSAqIGVFLAQDLLLFFLMWELELVPVYLLISIWG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 138 NQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNlFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK12561 132 GQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFT-FDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 218 KAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK12561 210 DAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 297 VIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLV 376
Cdd:PRK12561 290 VLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFV 369
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 30466122 377 GEL--FITMA-----TFSWSNMTIILTGLNMLITATYSLYML 411
Cdd:PRK12561 370 SELtvFLGITssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
6.32e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 144.85 E-value: 6.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 58 SDPLSSPLLTLAMWLFPLTIMASQYHLAKESLerkkhFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAWPVTFKPKL-----FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 138 NQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWSNdLMWVACIMAFMIKMPLYGLHLWLP 217
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 218 KAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVC-LWGMVMTSLICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLgVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 297 VIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLV 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 30466122 377 GEL--FITMATFSWSNMT-----IILTGLNMLITATYSLYML 411
Cdd:PRK02546 398 AELmvFVGFATSDAYTLPfrvvvVFLAAVGVILTPIYLLSML 439
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-416 |
1.51e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 140.61 E-value: 1.51e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASQyhlakESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSwSNDLMWVACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVclWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLAT--WAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 296 LVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGL---QSLLPLMSTWWLLASLTNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 30466122 373 INLVGELFITMATFswsNMTIILTGLNMLITATYSLYMLTMTQR 416
Cdd:PRK06473 389 VGFIAEFLVFRGSF---PIFPVQTLLCMIGTGLTAVYFLLLVNR 429
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
107-411 |
6.25e-36 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 138.92 E-value: 6.25e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 107 IMTFTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMG---TLNLFMMTYWT 183
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNFETLANQS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 184 QELAdswSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLM 263
Cdd:CHL00011 205 YPVA---LEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 264 -VCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIhnRTM 342
Cdd:CHL00011 282 iVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLV 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30466122 343 FLAR--GLQSLLPLMSTWWLLASLTNLALPPSINLVGEL-----FITMATFSWSNMTII--LTGLNMLITATYSLYML 411
Cdd:CHL00011 360 YLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELivffgIITSQKYLLMPKILItfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-414 |
2.66e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 125.59 E-value: 2.66e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASQyhlakESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 139 QtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSwSNDLMWVACIMAFMIKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVclWGMVMT---SLICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAI--IGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 296 LVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSL---LPLMSTWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 30466122 373 INLVGELFITMATFSWSNMTIILTGLNMLITATYSLYMLTMT 414
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRT 430
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-449 |
1.51e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 111.89 E-value: 1.51e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 55 TFFSDPLSSPLLTLAMWLFpltIMASQYHLA-KESLERKKHFLFtLISLQLFLIMTFTATeLIMFYILFEATLIPTLIII 133
Cdd:PRK08375 72 ELRADSLSALFLLVTSILA---IAALLYAIGyGEHRQTRFYALF-LLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 134 TRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTywtQELADSWSNDLMWVACIMAFMIKMPLYGLH 213
Cdd:PRK08375 147 AMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA---GALAENPTVVTAFGFVLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKF----MAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYS 289
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 290 SVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLAL 369
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 370 PPSINLVGELFITMATFS---WSNMTIILTGlnMLITATYSLYMLTMTQRGEPPyhahNFNPSLTRENTLMSmhVFPLLL 446
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLYFLRIWYRAFFGPPP----PGSEAPKQEAPLGM--LAPSLA 454
|
...
gi 30466122 447 LTL 449
Cdd:PRK08375 455 LAL 457
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
6.67e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.12 E-value: 6.67e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 59 DPLSSPLLTLAMWLFPLTIMASQYHLAKESLERKKHFLFTLisLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLG--LEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 139 QTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQEL----------ADSWSNDLMWVACIMAFMIKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLsfpltgglagNPPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 209 LYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI-------TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 30466122 362 ASLTNLALPPSINLVGELFITMATFSWSnmtIILTGLNMLITATYSL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISL 442
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
6.14e-21 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 87.58 E-value: 6.14e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFS-DPLSSPLLTLAMWLFPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGiDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 30466122 80 SQYHLAKESLERKKHFLFTLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-449 |
2.20e-20 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 93.46 E-value: 2.20e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFLMVC--LWGMVMTSLICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 284 SLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 364 LTNLALPPSINLVGELFITMATFS---WSNMTIILTGLNMLITATysLYMLTMTQRGEPPyhahnFNPSLTRENTLMSMH 440
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL--VRRVAGMVFGEPP-----EAVNRGDLGWLTTSP 459
|
....*....
gi 30466122 441 VFPLLLLTL 449
Cdd:PRK06458 460 MFVHLVLVL 468
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
2.19e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.50 E-value: 2.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 110 FTATELIMFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALSSIQNYMGTLNLFMMTywtQELADS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADIS---QGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 190 WSNDLMWVAC--IMAFMI-KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGM-MRITII-----LNPLTKFMAYP 260
Cdd:PRK08668 190 TSTGFALIVFlfLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFlLVLYVLpgtklFSEFGTYRGVP 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30466122 261 ---FLMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK08668 270 lfnYILAWLGNIsiIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
96-395 |
2.25e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 77.66 E-value: 2.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 96 LFTLISLqLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLN 175
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 176 LFMMTYwtqelADSWSNDLMWVACIMaFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTK 255
Cdd:MTH00062 154 FSDWGS-----DDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 256 FMaypFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMaLVIVAILIQTPWSFMGATTLM-IAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 228 LG---YLFLCCLFSVFFLITACSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30466122 335 ERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIIL 395
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-412 |
4.26e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 77.46 E-value: 4.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 52 FSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESLERKKHFLFTLISLQLF-LIMTFTATELIMFYILFEATLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 131 IIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELAdswsndLMWVACIMAFMIKMPLY 210
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGII 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRitIILNPLTKFMAYPFLMVCLwGMVMTSL---ICLRQTDLKSLIA 287
Cdd:PRK08667 223 PFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILLA-GSISALLgviYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 288 YSSVSHMALVIVAILIQTPWSFMGATTLM-----------IAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMS 356
Cdd:PRK08667 300 YSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTS 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 30466122 357 TWWLLASLTNLALPPSINLVGELFITMATFswSNMTIILTGLNMLITATYSLYMLT 412
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESFF--QSFSVADPLIKILLFSVLAIFALT 433
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-424 |
4.42e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 74.42 E-value: 4.42e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 115 LIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWsndL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSP---L 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 195 MWVACIMAF---MIKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRitiiLNPLtkFMAYPFLM-----VC 265
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLtvvaiIG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 266 LWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLA 345
Cdd:COG1009 283 AITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 346 RGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNML---ITATYSLYMLTMT----QRGE 418
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPK 439
|
....*.
gi 30466122 419 PPYHAH 424
Cdd:COG1009 440 TPKHPH 445
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-379 |
1.70e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 1.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 108 MTFTATELIMFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELA 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 188 DSWSNDLMWVAcIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPlTKFMAYPFLMVCLW 267
Cdd:PRK12665 205 SGTRTALFAVL-LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 268 GMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFcLANSNYERiHNRTMFLAR- 346
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-QAGSSSLRRl 360
|
250 260 270
....*....|....*....|....*....|....*
gi 30466122 347 -GLQSLLPLMSTWWLLASLtNLA-LPPSINLVGEL 379
Cdd:PRK12665 361 gGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-387 |
2.95e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 71.72 E-value: 2.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 104 LFLIMTFTATELIM------FYILFEATLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 178 MMTYWTQELaDSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFM 257
Cdd:PRK08377 192 HIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 258 AYPFLMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLVIIMATLtvFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 30466122 336 RIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFS 387
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-330 |
5.70e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 71.23 E-value: 5.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 96 LFTLISLQLFLimtftATELIMFYILFEATLIPTLIIITRWGNQTErlNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLN 175
Cdd:PRK12650 118 AFMAAMLLLVL-----ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 176 LFMMTYwtqelADSWSNDLMWVACI-----MAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIIL 250
Cdd:PRK12650 191 LSGILH-----SDVWAEKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 251 NPLTKFMAypFLMVClwGM---VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK12650 266 HDVAVWNW--LLIIV--GMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
...
gi 30466122 328 CLA 330
Cdd:PRK12650 342 MLI 344
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
6.12e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 70.36 E-value: 6.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 52 FSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLakeSLERKKHFLFTLIslqLFLIM----TFTATELIMFYILFEATLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTI---GIERERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 128 PTLIIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVAC--IMAFMI 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 285 LIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASL 364
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340 350
....*....|....*....|....*....|....
gi 30466122 365 TNLALPPSINLVGELFITMATFSWSNMTIILTGL 398
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVL 415
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-327 |
7.93e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.17 E-value: 7.93e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 93 KHFLFTLISLQLFLIMTFTATELIMFYILFE-ATLIPTLIIITRwgNQTERLNAGLYFLF-------YTLIGsLPLLVAL 164
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFiastamiFAFIG-LIFLFSL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 165 SSIQNYMGTLNlfmmtyWTQ--ELADSWSNDLMWVACIM---AFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:PRK08676 179 TRQALGTGTLN------WTElaAHASLLSPSVLGASFLFifiGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIG 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 240 GYGMMRITIILNPLTKFMAYPFLMVCLwGMVMTSLIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLM 316
Cdd:PRK08676 253 IYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHM 331
|
250
....*....|.
gi 30466122 317 IAHGLTSSMLF 327
Cdd:PRK08676 332 LAHSLVKSGLF 342
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-427 |
9.75e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 69.85 E-value: 9.75e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 47 NNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESLERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATL 126
Cdd:PRK06589 70 MDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 127 IPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALSSIQNYMGTLNLFMMTYWTQelADSWSNDLMWVACImafmI 205
Cdd:PRK06589 150 ISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSK--NQSIILLLMFIYGI----A 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITII---LNPLTKF--MAYPFLMVCLWGMVMTSLICLRQT 280
Cdd:PRK06589 223 KTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTD 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 281 DLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWL 360
Cdd:PRK06589 303 NIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIIS 382
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30466122 361 LASLTNLALPPSINLVGELFITMATFSWSNMT--IILTGLNMLITATYSLYMLTMTQRGEPPYHAHNFN 427
Cdd:PRK06589 383 ISSLSLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLLKILSSIYKPSLSENSF 451
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-457 |
3.34e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 68.63 E-value: 3.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 95 FLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 175 NLFMMTYWTQELADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITIILNpL 253
Cdd:PRK12646 192 NITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-L 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 254 TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAI-----LIQTPWSFMGATTLMIA---------H 319
Cdd:PRK12646 270 SNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmnH 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 320 GLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTnLALPPSIN--LVGELFIT-------MATFSWSN 390
Cdd:PRK12646 350 AIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFLDaltqtgqLSQFSLIS 428
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30466122 391 MTIILT--GLNMLITATYSLYMLTMTQRGepPYHAHNFNPSLTRENTLMSMHvfPLLLLTLNPKILMGP 457
Cdd:PRK12646 429 MIIIVFigVIASIFTFTYALYMVKEVFWG--KYDSKVFTKKNIHEPWLFSLP--SLILMVLVPVIFFVP 493
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-338 |
1.15e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 66.51 E-value: 1.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 6 IPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNnsnnFSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHla 85
Cdd:PRK07234 17 FAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLDN----FGVTLRADALSGYFILTNALVTLAVIFYCWES-- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 86 keslERKKHFLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALS 165
Cdd:PRK07234 91 ----AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 166 SIQNYMGTLNLfmmtywtQELADSWSNDLMWVAciMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMR 245
Cdd:PRK07234 166 LVYQANGTFAF-------SGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 246 ITIILNPLTKFMAYPFLMVCLWGmvmtSLICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsfmgATTLMIAHGLTSSM 325
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKST 304
|
330
....*....|...
gi 30466122 326 LFCLANSNYERIH 338
Cdd:PRK07234 305 LFLCAGALPSRNF 317
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-401 |
3.18e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.00 E-value: 3.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 111 TATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADsw 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY-- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 191 sndLMWVACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGM 269
Cdd:PRK06525 208 ---LVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 270 VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 30466122 347 GLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTIILTGLNML 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
51-404 |
5.30e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 64.94 E-value: 5.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 51 NFSstFFSDPLSsplLTLAMWL----FPLTIMASQYHLAKESLERKKHFLFTLISLQLFLIMtftATELIMFYILFEATL 126
Cdd:PRK12647 57 NLS--FLLDGLS---LTFALLItgigTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVL---SDNLITLFVFWELTS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 127 IPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSwSNDLMWVACIM--AFM 204
Cdd:PRK12647 129 ITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREH-PLYLAILLLVLggAFT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 205 iKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRitiiLNPLTKFMAYPFLMVCLWG---MVMTSLICLRQT 280
Cdd:PRK12647 208 -KSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 281 DLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWL 360
Cdd:PRK12647 282 DLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAAL 361
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 30466122 361 LASLTNLALPPSINLVGELFITMATFSWSNMTIILTGL----NMLITA 404
Cdd:PRK12647 362 LAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAavlgNALMVA 409
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-387 |
7.36e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 64.14 E-value: 7.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 117 MFYILFEA-TLIPTLIIITrwgNQTERLN--AGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTywTQELADSWSNd 193
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR--AAHLSPFWAS- 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 194 lmwVACIMAFM---IKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITI-ILNPLTKFMAYPFLMVCLWGM 269
Cdd:PRK06521 211 ---LVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 270 VMTSLICLRQTDLKSLIAYSSVSHMALVIVAI---LI--------QTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIH 338
Cdd:PRK06521 288 VLGVLYALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATG 367
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 30466122 339 NRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFS 387
Cdd:PRK06521 368 TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLS 416
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
1.88e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 119 YILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 199 CIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITI-ILNPLTKFMAYPF----LMVCLWGMVMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 274 LICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 30466122 354 LMSTWWLLASLTNLALPPSINLVGELFI---TMATFSWSNMTIILTG 397
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYIldaFIKSNAWIGLVVLLVG 421
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
39-323 |
2.52e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 58.97 E-value: 2.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 39 LSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESLERKKHFLFTLISLqLFLIMTFTATELIMF 118
Cdd:COG1007 49 LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFAT-LGMMLMASANDLLTL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 119 YILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLpLLVALSSIQNYMGTLNLFMMTywtQELADSWSNDLMWV 197
Cdd:COG1007 128 FLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAGIA---AALAAGGANSPLLL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 198 ACiMAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMVLAAILlKLGGYGM-MRI-TIILNPLTKFMAYPFLMVCLWGMV 270
Cdd:COG1007 204 LG-LVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLlVEAFPGLAADWQLLLAVLAVLSMT 281
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 30466122 271 MTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTS 323
Cdd:COG1007 282 VGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
2.87e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 59.07 E-value: 2.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 155 IGSLPLLVALSSIQNYMGTLNLFMMTYWTQELAdswSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAI 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 235 LLKLGGYGMMRITIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALV-------IVAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 307 ---WSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITM 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 30466122 384 ATFSWSNMTIILTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-456 |
2.16e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.11 E-value: 2.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 52 FSSTFFSDPLSSpLLTLAMWLFPLTIMAsqYHLAKESLERKKHFLFTLISLQLF-LIMTFTATELIMFYILFEATLIPTL 130
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDIEHSGRRYGFPPFILLLMAgVIGSFLTGDLFNLYVWFEVMLIASF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 131 IIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNlfmMTYWTQELADSWSN-DLMWVACIM--AFMIKM 207
Cdd:PRK12663 146 VLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLN---MAHIAMRLNDMGDTaTLTTIALLFllAFGMKA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 208 PLYGLHlWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTKFMAYPFL--MVCLwGMVMTSLICLRQTDLKSL 285
Cdd:PRK12663 222 ALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 286 IAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLT 365
Cdd:PRK12663 300 AGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFA 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 366 NLALPPSINLVGELFITMATFSWSNMTIILTGLNMLITATYSLY--MLTMTQRGEPPyHAHNFNPSLTRENTLMSMHVFP 443
Cdd:PRK12663 380 IGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFriFFLAYWGDKDG-EEVNFKPIPLYRKLPLSILAVV 458
|
410
....*....|...
gi 30466122 444 LLLLTLNPKILMG 456
Cdd:PRK12663 459 VIAMGIAAEPLLN 471
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
37-408 |
1.26e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 53.82 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 37 TSLSLLNQTDNNSNNFSSTFFSDPLSSPLLTLAMWLFPLTIMASQYHLAKESleRKKHFLFTLISLQLFLIMTFTATELI 116
Cdd:MTH00208 84 INISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDP--NKNAFFRLLIIFLLNMLILTSSNNLF 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 117 MFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQElaDSWSNDLMW 196
Cdd:MTH00208 162 LLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNS--NSFLINILL 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 197 VACIMAFMIKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygMMRITIILNPLTKFmaypfLMVCLWGM 269
Cdd:MTH00208 240 FGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWF-----LSLCLILG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 270 VMTSL----ICLRQTDLKSLIAYSSVSHMALVIVAILIQTPW-SFMGATTlmiaHGLTSSMLFCLANSnyeRIHN----- 339
Cdd:MTH00208 308 SLTALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNlALFHICT----HAFFKAMLFLCSGS---IIHSlnneq 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30466122 340 --RTMflaRGLQSLLPLMSTWWLLASLTNLALP-----PSINLVGELFITmatfSWSN-MTIILTGLNMLITATYSL 408
Cdd:MTH00208 381 dlRKM---GGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGLA----SISNlLSIILALIATLLTAVYSF 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-371 |
1.41e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 114 ELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFMMTYWTQElADSWSND 193
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSE-NPTVVAK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 194 LMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAIllKLGG-YGMMRITI-ILNPLTKFMAYPFLMVCL--WGM 269
Cdd:PRK08376 221 IALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVI--KQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTM 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 270 VMTSLICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQTPWSFMGATTL------MIAHGLTSSMLFCLANSNYERI 337
Cdd:PRK08376 299 FVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYET 378
|
250 260 270
....*....|....*....|....*....|....
gi 30466122 338 HNRTMFLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK08376 379 GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
3.23e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 53.00 E-value: 3.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 111 TATELIMFYILFEATLIPTLIIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLfmmtywTQELA 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRL------SELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 188 DSWSNDLMWVA--CIMA-FMIKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITiilnPLTKFMAYPFLM 263
Cdd:PRK12644 195 DPPTGPAVSVAvvLILVgALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPVWRPT 269
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30466122 264 VCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK12644 270 VLVLGlatMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
1.10e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.00 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 137 GNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNlfmMTYWTQELADSWSND--LMWVACIM---AFMIKMPLYG 211
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLN---MADLAQRIAQLPAADraLLEAGAALllvVFLIKAAMWP 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 212 LHLWLPKAHVEA--PIAGsmvLAAILLKLGGYGMMRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLI----CLRQTDLKS 284
Cdd:PRK12666 229 LNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRR 305
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 30466122 285 LIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLFCLA 330
Cdd:PRK12666 306 LAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
82-371 |
3.37e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.44 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 82 YHLAKESLERKKHFLftLISLQLFLIMTFTATELIMFyILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:PRK12649 103 YMSHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMF 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 162 VALSSIQNYMGTLNLFMMTYWTQELADSWSNDLMWVACIMAFM---IKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLK 237
Cdd:PRK12649 180 AGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 238 LGGYGMMRITIILNPLTKFmaypFLMVCLWG---MVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTP----WSFM 310
Cdd:PRK12649 259 AGVYLVARIHPIFSGTEAW----FILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVA 334
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30466122 311 GATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK12649 335 AATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-323 |
9.98e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 47.89 E-value: 9.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 1 MLKIIIPTIMLLPMTWYSTNPMVWINITLHSLTISFTSLSLLNQTDNNSNNFSSTFFSDPLSSpLLTLAMWLFPLTIMAs 80
Cdd:PRK05777 14 ELILLGAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFAL-FLKGLILLASLLALL- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 81 qyhLAKESLERKKHF-LFTLISLQLFLIMTF-TATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:PRK05777 92 ---LARPYLEDRGRGeFYLLVLFALLGMMVMvSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 159 PLLVALSSIQNYMGTLNLfmmTYWTQELADSWSNDLMWVACImAFMI-----KMPLYGLHLWLPKAHVEAPIAGSMVLAA 233
Cdd:PRK05777 169 FLLYGMSLLYGATGSLSF---AGIAKALADGSGNSLLLLFGL-VFLLvglafKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 234 ILlKLGGYGM-MRI-TIILNPLTKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMG 311
Cdd:PRK05777 245 AP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSA 323
|
330
....*....|..
gi 30466122 312 ATTLMIAHGLTS 323
Cdd:PRK05777 324 VLFYLLAYLFMT 335
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
1.23e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 47.58 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 136 WGNQTER-LNAGL-YFLFYTLIGSLpLLVALSSIQNYMGTLnLFMMTYWTQELADswsndlmWVACImAFMIKMPLYGLH 213
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSF-AFGAIAGLGGTAA-------WLILI-GFGVNAAFPPLH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI---TIILNPLTKFMA-YPFLMVCLwgmvmtsliclrQTDLKSLIAYS 289
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLIYIGAAMAvYGVFFALL------------ENDLRRLLSYH 271
|
170 180 190
....*....|....*....|....*....|....*...
gi 30466122 290 SVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:PRK12668 272 IVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
155-371 |
4.18e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 46.06 E-value: 4.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 155 IGSLPLLVALSSIQNYMGTLNLFMMTYW--TQELADSWSNdLMWVACIMAFMIKMPLYGLHLWLPKAhVEAPIAGSMVLA 232
Cdd:PRK07390 182 VGDLLLLMGVVALSPLAGTLNFSDLAAWaaTANLDPLTAT-LLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRN 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 233 AILLKLGGYgmmrITIILNPLtkFMAYPF---LMVCLWGM--VMTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTPw 307
Cdd:PRK07390 260 SVVVATGAW----VLIKLQPV--LALSPValtVLIVIGTVtaIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQP- 332
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30466122 308 sfMGATTLMIAHGLTSSMLFCLANSNYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPP 371
Cdd:PRK07390 333 --DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLP 394
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
100-393 |
6.38e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 45.33 E-value: 6.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 100 ISLQLFLIMTF-TATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLNLFM 178
Cdd:MTH00032 117 LSLFTFLMMVLvTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 179 MT-------------YWTQELADSWS-----NDLMWVACIMafmiKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00032 197 FNggsvgsgimdrgyYGGGAYESPLApfaiiGILLLIGCIG----KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 241 YGMMRITiilnPLTKFMAYPFLMVCLWGMV---MTSLICLRQTDLKSLIAYSSVSHMALVIVAILIQTpwSFMGATTLMI 317
Cdd:MTH00032 273 FLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLV 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30466122 318 AHGLTSSMLFCLANS--NYERIHNRTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTI 393
Cdd:MTH00032 347 NHAFFKALLFLSAGSviHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
96-449 |
2.22e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.53 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 96 LFTLislqlFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALSSIQNYMGTLN 175
Cdd:MTH00020 119 LFTF-----LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLD 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 176 ---LFMMtywtqeLADSWSNDLMWVaCIMAF---MIKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAI--------L 235
Cdd:MTH00020 194 fssVFNM------VVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVfllirsspL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 236 LKLGGYGMMRITIIlNPLTKFMAYPFLMVclwgmvmtsliclrQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATTL 315
Cdd:MTH00020 267 FEQAPLALIIVTIV-GSLTVFFAATVGLV--------------QNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFH 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 316 MIAHGLTSSMLFCLANSNYERIHN-RTMFLARGLQSLLPLMSTWWLLASLTNLALPPSINLVGELFITMATFSWSNMTII 394
Cdd:MTH00020 329 LMNHAFFKALLFLSAGSVIHALSDeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFA 408
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30466122 395 --LTGLNMLITATYSLYMLTMTQRGeppyhahnfNPSLTRENtLMSMH------VFPLLLLTL 449
Cdd:MTH00020 409 ywLGCFSALLTAFYSIRLIYLTFLS---------NTNLKKAV-FFHLHegdwnlLLPLGILAL 461
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
200-327 |
3.36e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 39.63 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 200 IMAFMIKMPLYGLHLWLPKAHVEAPIAgSMVLAAILLKLGgygMMRITIILNPLTKFmaypFLMVCLWGMVMTSLICLRQ 279
Cdd:MTH00196 102 IVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLG---IFSILVSIGLNVNI----LLIGGLFSLFVGAIGALNQ 173
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 30466122 280 TDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATTLMIAHGLTSSMLF 327
Cdd:MTH00196 174 TKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
88-364 |
6.46e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 6.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 88 SLERKKHFLFTLISLQ-LFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTErlnAGLYFLFYTLIGSLPLLVALSS 166
Cdd:PRK06459 66 EYDHYGKWLSSLYILTiLGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAW 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 167 IQNYMGTLNL-FMMTYWTQELADswsndlmwvaciMAFMIKMPLYGLHL--WLPKAHVEAPIAGSMVLAAILLKLGGYGM 243
Cdd:PRK06459 143 AFIISGTTNFsYLPSPVPLILAS------------FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGI 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 244 MRITIILNPL-TKFMAYPFLMVCLWGMVMTSLICLRQTDLKSLIAYSSVSHMALVIVAI--------LIQTPWSFMGATT 314
Cdd:PRK06459 211 LKMTILTQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITV 290
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30466122 315 LM--IAHGLTSSMLFC------------LANSNYERIHNRTMFLARGLQSLLPL---MSTWWLLASL 364
Cdd:PRK06459 291 ILysFAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
95-455 |
8.84e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.03 E-value: 8.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 95 FLFTLISLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALssiqnymgtL 174
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGL---------L 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 175 NLFMMTYWTqelADSWSNDLMWVACIMAFMIKMPLYGLHLWLPKAHVEAPIAGSMVLAAILlKLGGYgMMRITIILNPLT 254
Cdd:MTH00200 77 NAWTSGQWG---ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPF-ALLIQLAPALNS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 255 KFMAYPFLMVCLWGmvmtSLICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATTLMIAHGLTSSMLFCLANSNY 334
Cdd:MTH00200 152 NILLLLGLLSVLVG----GWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS---PNLALLYLLLYVIITLTVFLLLNLLNS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30466122 335 ERIHNRTMFLARGlqsllPLMSTWWLLASLTNLALPPSINLVGELFITMA----TFSWSNMTIILTGLNMLITATYSLYM 410
Cdd:MTH00200 225 TKINSLSSSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQElskqGLFIYATILLLGSLLSLFFYLRLSYL 299
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 30466122 411 LTMTQRGEPPYHAHNFNPSLTRENTLMSMHVFPLLLLTLNPKILM 455
Cdd:MTH00200 300 TLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| |
