|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.72e-160 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 460.39 E-value: 1.72e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLSFLWCFWWIVHSLMFLISFIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSFWVCSLMLTSSSSIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 81 NLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 161 INLIIGSLFFPLFVDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 241 LGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 321 IYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 304322861 401 YSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFFSASFLCI 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-443 |
4.01e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 343.75 E-value: 4.01e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 47 MISCFFGVDYFSFYLILLSFWVCSLMLTSSSSIYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 127 ILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLFVDFGSFYFM---FYLFIVLAFLVKMPMFLVHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSmglWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 204 LPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 284 MVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 364 VGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFFSASFLC 443
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-443 |
2.71e-112 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 337.87 E-value: 2.71e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLS-FLWCFWW--IVHSLMFLISFIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSFWVCSLMLTSSS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPlIKYPWSWalTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 78 SIYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 158 LFKINLIIGSLFFPLF-VDFGSFYF--MFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 235 MSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 315 FCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 304322861 395 TLYMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFFSASFLC 443
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.27e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 335.80 E-value: 1.27e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLSFLWCFWWIVHSLMFLISFIFMLNFYLCTD-FNMISCFFGVDYFSFYLILLSFWVCSLMLTSSSSI 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLmTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 80 YNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 160 KINLIIGSLFFPLFVDFGSFYFMFYLFI---VLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWiflMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 237 VITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 317 LSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 304322861 397 YMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFFS 438
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILK 442
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
1.56e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 328.31 E-value: 1.56e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLSFLW---CFWWIVHSLMFLISFIfMLNFYLCTDFNMI--SCFFGVDYFSFYLILLSFWVCSLMLTS 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSkpkFLWTNTTTYSLLIALL-SLQWLKPPYYPTKnlTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 76 SSS--IYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLP 153
Cdd:MTH00124 80 SQNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 154 LLIVLFKINLIIGSLFFPLFVDFGSF------YFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 228 GYGIFRVMSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGH 307
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 308 GLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFL 387
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 304322861 388 SFFSATYTLYMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLL 435
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLL 447
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
9.66e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 316.09 E-value: 9.66e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLSFL----WcFWWIVHSLMFLISFIFMLNFYLCT-DFNMISCFFGVDYFSFYLILLSFWVCSLMLTS 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLspkkW-LWTLTTTNSLIIAFLSLMWFNLPSeTMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 76 SSSIYNLN--NYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLP 153
Cdd:MTH00068 80 SQNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 154 LLIVLFKINLIIGSLFFPLFVDFGSFYFM------FYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 228 GYGIFRVMSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 308 GLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 304322861 388 SFFSATYTLYMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFF 437
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
5-444 |
1.13e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 313.07 E-value: 1.13e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 5 LFMIIFLIPLSFLWCFWWIVHSLMFLISfIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSFWVCSLMLTSSssIYNLNN 84
Cdd:MTH00044 11 IAITSWIVPKNKLWPISISQSSLISLLS-LFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLAS--INHLSN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 85 YSCL----FNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFK 160
Cdd:MTH00044 88 NSPNnqrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 161 INLIIGSLFFPLF------VDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00044 168 IYSSSSSLSIPLSelnwltSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 235 MSVITFLGVKF-NYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSG 313
Cdd:MTH00044 248 INLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSA 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 314 LFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSAT 393
Cdd:MTH00044 328 LFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAI 407
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 304322861 394 YTLYMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFFSASFLCI 444
Cdd:MTH00044 408 YSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
2.98e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 299.50 E-value: 2.98e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLSFLWCFWWI-----VHSLMFLISFIFMLNFYLCTDFNMISCFFgVDYFSFYLILLSFWVCSLMLTS 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 76 SSsiYNLNNYSC----LFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVAS 151
Cdd:MTH00110 80 SQ--HHLSKEPLtrkkLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 152 LPLLIVLFKINLIIGSLFFPLF------VDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLK 225
Cdd:MTH00110 158 LPLLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 226 LGGYGIFRVMSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMV 305
Cdd:MTH00110 238 LGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 306 GHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLM 385
Cdd:MTH00110 318 AHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMG 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 304322861 386 FLSFFSATYTLYMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLL 435
Cdd:MTH00110 398 LNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLL 447
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-442 |
6.99e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 285.29 E-value: 6.99e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 5 LFMIIFLIPLSFLWCFWWIVHSLMFLISFIFMLNFYLCTDFNMISC--FFGVDYFSFYLILLSFWVCSLMLTSSSSIYNL 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSnlYLSYDPLSSPLVILSCWLLPLMFLASQNHMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 83 N--NYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFK 160
Cdd:MTH00206 86 EpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 161 INLIIGSLFFPLF---VDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSV 237
Cdd:MTH00206 166 LQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 238 ITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 318 SNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 304322861 398 MYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLLFFSASFL 442
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
5-435 |
3.87e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 268.36 E-value: 3.87e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 5 LFMIIFLIPLSFLWCfWWIVHSLMFLISFIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSFWVCSLMLTSSSSIYNLN- 83
Cdd:MTH00127 11 LIPTTWLTPAKWLWT-TTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEp 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 84 -NYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKIN 162
Cdd:MTH00127 90 iNRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQ 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 163 LIIGSL------FFPLFVDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMS 236
Cdd:MTH00127 170 NSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMV 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 237 VITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFC 316
Cdd:MTH00127 250 MLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFC 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 317 LSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTL 396
Cdd:MTH00127 330 LANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSL 409
|
410 420 430
....*....|....*....|....*....|....*....
gi 304322861 397 YMYSYSQHGKNYSGVYSYSLGYFREYHLLVLHWLPLNLL 435
Cdd:MTH00127 410 YMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLL 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
1.91e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 183.36 E-value: 1.91e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 48 ISCFFGVDYFSFYLILLSFWVCSL-MLTSSSSIYNLNNyscLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLL 126
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLaILASWNEIKKRPK---LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 127 ILGWGYqPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLF------VDFGSFYFMFYLFIvLAFLVKMPMFLV 200
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFF-IAFAVKVPMFPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 201 HLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVK-FNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSV 279
Cdd:COG1008 229 HTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAyFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 280 AHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPP 359
Cdd:COG1008 309 SHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 304322861 360 SFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMY 399
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-376 |
7.32e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 170.96 E-value: 7.32e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 106 SMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLFVDFGSFY----- 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 181 -FMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYFWLSLSMSGGVI 259
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 260 VSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLS-NIIYERLGSRSMLINKCLIN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|....*...
gi 304322861 339 LMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISW 376
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAA 278
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
18-399 |
3.27e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 166.39 E-value: 3.27e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 18 WCFWWIVHSLMFLISFIFMLNFYLCTDFNMI----------SCFFGVDYFS-FYLILLSFWVCSLMLTSSSSIYNLNNYs 86
Cdd:MTH00204 35 WSLAILFSTLVLWGAFDGEGQFQFINLIEWIisptlnfqwgPLVFAVDGVSlFFILLTTLLIPICILISWKSIKFLFKE- 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 87 clFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIG 166
Cdd:MTH00204 114 --FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITG 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 167 SL-FFPLFVDFGSFYFMFYLFI--VLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGV 243
Cdd:MTH00204 192 TTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAAS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 244 K-FNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIY 322
Cdd:MTH00204 272 EyFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLY 351
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 304322861 323 ERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMY 399
Cdd:MTH00204 352 ERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-330 |
5.04e-46 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 166.15 E-value: 5.04e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 48 ISCFFGVDYFSFYLILLS-FWVCSLMLTSSSSIYNLNNysclfNFVILFLMI--MLYCSFSSMSLMMFYIFFEASLVPTL 124
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTaLLTPLAVLASWEEIKKRVK-----FYMAALLWLegGVIGVFAALDLLLFYVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 125 LLILGWGYqPERLQAGVYLIFYTLVASLPLLIVLFkinliigSLFFPLFVDFGSF-----------YFMFYLFIV---LA 190
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAII-------YLVVVYYNATGTFdiadllnlplpPGVQYWLFLaffIA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 191 FLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLG-VKFNYFWLSLSMSGGVIVSFICFCQIN 269
Cdd:PRK05846 221 FAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDAsHEFAPIIITLGVIAIIYGALVALAQTD 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 304322861 270 LKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSM 330
Cdd:PRK05846 301 IKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDI 361
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
2.74e-45 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 163.96 E-value: 2.74e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 48 ISCFFGVDYFSFYLILLSfwvcSLMLTSS--SSIYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLL 125
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLT----ALLTLLAilASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 126 LILGWGyQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLF-----FPLFVDFGSFYFMFYLFiVLAFLVKMPMFLV 200
Cdd:TIGR01972 145 LIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFdllelLNLPLPFGVQTWLFLAF-FIAFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 201 HLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSV 279
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 280 AHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPP 359
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 304322861 360 SFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMY 399
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
1.03e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 162.78 E-value: 1.03e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 52 FGVDYFSFYLILLSFWV--CSLMLTSSSSIYNLNNysclFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 130 WGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLFVDF-----GSFYFMFYLFIVLAFLVKMPMFLVHLWL 204
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 205 PSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVK-FNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMS 283
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 284 MVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNL 363
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 304322861 364 VGELSLLNSIISWSFLSFFMLMFLSFFSATYTLY 397
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
49-399 |
5.80e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 157.52 E-value: 5.80e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 49 SCFFGVDYFS-FYLILLSFWVCSLMLTSSSSIYNLNNYsclFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLI 127
Cdd:MTH00217 73 PVVFAVDGISiFFLILTALLTPICILISWNSIKFLIKE---FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 128 LGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFP----LFVDFGSFYFMFYLFIvLAFLVKMPMFLVHLW 203
Cdd:MTH00217 150 GIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQalccLKIEKELQYFIFLGFF-LSLAIKIPKIPFHIW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 204 LPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHM 282
Cdd:MTH00217 229 LPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 283 SMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFN 362
Cdd:MTH00217 309 GLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCN 388
|
330 340 350
....*....|....*....|....*....|....*..
gi 304322861 363 LVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMY 399
Cdd:MTH00217 389 FVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
26-419 |
1.30e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 146.59 E-value: 1.30e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 26 SLMFLISFIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSFWVCSLMLTSSSSIYNLNNYSCLfnfvilfLMIMLYCSFS 105
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNL-------LILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 106 SMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLFVDFGSFYFMfyl 185
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEMFFIL--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 186 fiVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLgvkFNYFWLSLSMSGGVIVSFICF 265
Cdd:MTH00094 158 --SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 266 CQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSL 345
Cdd:MTH00094 233 FQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGL 312
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 304322861 346 WWFQLSSSNMAAPPSFNLVGELSLLNSIISWSFLSFFMLMFLSFFSATYTLYMYSYSQHGKNYSGVYSYSLGYF 419
Cdd:MTH00094 313 IFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-330 |
6.53e-38 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 144.02 E-value: 6.53e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 53 GVDYFSFYLILLSFWVCSLMLTSSssiYNLNNYSCLFnfviLFLMIMLYCS----FSSMSLMMFYIFFEASLVPTLLLIL 128
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFAS---WKVTRKPRLF----YFLMLVLYSAqigvFLAQDLLLFFLMWELELVPVYLLIS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 129 GWGYQpERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPL----FVDF-GSFYFMFYLFIVLAFLVKMPMFLVHLW 203
Cdd:PRK12561 129 IWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTW 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 204 LPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MSVITFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHM 282
Cdd:PRK12561 208 LPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHM 287
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 304322861 283 SMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSM 330
Cdd:PRK12561 288 GFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSI 335
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-375 |
3.56e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 112.55 E-value: 3.56e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 52 FGVDYFSFYLILLSFWVCSLMLTSSSSIYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 132 YqPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLF------VDFGSFYFMFyLFIVLAFLVKMPMFLVHLWLP 205
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAF-ALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 206 SAHVEAPISGSMILAGVLLKLGGYGIFRVmsVITFLGVKFNYFW----LSLSMSGGVIVSFICFCQINLKSLIAYSSVAH 281
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRV--LTLLFGADPALFLgtllLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 282 MSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSF 361
Cdd:COG0651 308 IGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330
....*....|....
gi 304322861 362 NLVGELSLLNSIIS 375
Cdd:COG0651 388 GFVSKWLLLQAALE 401
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-324 |
9.33e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 109.41 E-value: 9.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 53 GVDYFSFYLILLSFWVCSLMLTSSssiYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAA---WPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 133 QpERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLFV----DFG-SFYFMFYLFIVLAFLVKMPMFLVHLWLPSA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 208 HVEAPISGSMILAGVLLKLGGYGIFRvMSViTFLGVKFNYFWLSLSMSGGVIV---SFICFCQINLKSLIAYSSVAHMSM 284
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLR-MNA-GMLPDAHAQFAPLLIVLGVVNIiyaALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 304322861 285 VIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYER 324
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDR 357
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
30-325 |
1.20e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 108.88 E-value: 1.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 30 LISFIFMLNFY-------LCTDFNMISCF-----FGVDYFSFYLILLSFWVCSLmltSSSSIYNLNNYSCLFNFvilfLM 97
Cdd:CHL00011 46 LTTYAFCYHFQlddpliqLKEDYKWINFFdfhwrLGIDGLSIGPILLTGFITTL---ATLAAWPVTRNSRLFYF----LM 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 98 IMLYC----SFSSMSLMMFYIFFEASLVPTLLLILGWGYQpERLQAGVYLIFYTLVASLPLLIVLFKINL---------- 163
Cdd:CHL00011 119 LAMYSgqigLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLygsneptlnf 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 164 -IIGSLFFPLfvdfgSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MSVITFL 241
Cdd:CHL00011 198 eTLANQSYPV-----ALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHA 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 242 GVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNII 321
Cdd:CHL00011 273 HSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTS 352
|
....
gi 304322861 322 YERL 325
Cdd:CHL00011 353 YDRI 356
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-338 |
2.88e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 102.09 E-value: 2.88e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 53 GVDYFSFYLILL-SFWVCSLMLTSSSSIYNLNNYSCLfnfvILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWG 131
Cdd:PRK06473 76 GVDGLSLPLLVLnSLLTLIAIYSSDESIQRPRFYYSL----LLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 132 YQpERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFF---PLFVDFGSFYFMFYLF--IVLAFLVKMPMFLVHLWLPS 206
Cdd:PRK06473 152 GQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHTLPLSTQLLLLapILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMsvITFLGVKFNYFWLSLSMSGGVIVSFICFCQI---NLKSLIAYSSVAHMS 283
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFG--VGLFPEAWVYLAPWLATWAVVSVLYGASCAIaqkDMKKMVAYSSIGHMG 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 304322861 284 MVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLIN 338
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
18-343 |
2.74e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 92.29 E-value: 2.74e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 18 WCFWWIVHSLMFLISFIFMLNFYLCTDFNMISC------FFGVDYFSFYLILLSfwvcsLMLTSSSSIYNLNNYSCLFNF 91
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVnnvfngLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 92 VILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFP 171
Cdd:MTH00062 76 FLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFS 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 172 LFVDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYFWLS 251
Cdd:MTH00062 156 DWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 252 LSMSGGVIVSFIcfcQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSML 331
Cdd:MTH00062 236 LFSVFFLITACS---ELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWV 312
|
330
....*....|..
gi 304322861 332 INKCLINLMPSM 343
Cdd:MTH00062 313 LLKSGINGSLVL 324
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-365 |
2.34e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 87.07 E-value: 2.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 53 GVDYFSFYLILLSfwvCSLMLTSSSSIYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGY 132
Cdd:PRK07363 76 GVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 133 QpERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFF---PLFVDFGSFYFMFYLF--IVLAFLVKMPMFLVHLWLPSA 207
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFdydAISTQNLSLNTQLILLtgLLLGFGIKIPLVPLHTWLPDA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 208 HVEAPISGSMILAGVLLKLGGYGIFRVMsvITFLGVKFNYFWLSLSMSGGVIV---SFICFCQINLKSLIAYSSVAHMSM 284
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 285 VIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLV 364
Cdd:PRK07363 310 ILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLV 389
|
.
gi 304322861 365 G 365
Cdd:PRK07363 390 G 390
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-375 |
2.69e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 86.86 E-value: 2.69e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 52 FGVDYFSFYLILLSFWVCSLMLTSSSSIYNLNNYscLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 132 YQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPL----FVDFGSFYFMFYlFIVLAFLVKMPMFLVHLWLPSA 207
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADlagaLAENPTVVTAFG-FVLLALALKAAVFPLHTWLPRA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 208 HVEAPISGSMILAGVLLKLGGYGIFRVMSVI--TFLGVKFNYFWL-----SLSMsggVIVSFICFCQINLKSLIAYSSVA 280
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRIYFTVfgGDFRFALGLGWLlavlaLLSM---LVGSLAALGQDDVKRVLAYSTVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 281 HMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPS 360
Cdd:PRK08375 306 QMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
330
....*....|....*
gi 304322861 361 FNLVGELSLLNSIIS 375
Cdd:PRK08375 386 SGFVSKWYLVVGAVE 400
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
8-315 |
4.86e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 74.26 E-value: 4.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 8 IIFLIPLSFLWCFWWIVHSLMFLISFIFMLNFYLctdfnmiscFFGVDYFSFYLILLSFWVCSLMLTSSSSIYNLNNYSc 87
Cdd:PRK08668 30 IGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKL---------TFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 88 lFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILgWGYQPERLQAGVYLIFyTLVASLPLLIVLFKINLIIGS 167
Cdd:PRK08668 100 -FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 168 LFFPLFVDF------GSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVI--- 238
Cdd:PRK08668 177 FDFADISQGlindtsTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLpgt 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 239 -------TFLGV-KFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLC 310
Cdd:PRK08668 257 klfsefgTYRGVpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALF 336
|
....*
gi 304322861 311 SSGLF 315
Cdd:PRK08668 337 KGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
5-327 |
4.48e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 4.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 5 LFMIIFLIPLSF-LWCFWWIVHSLMFLISFIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSF------------WVCSL 71
Cdd:PRK08676 11 LFLRLGLLSRSHrLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRYLFIDHLGIFVVLIASvvfilaalyargYVDHL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 72 MLTSSSSIYNLNNYSCLFNFvilfLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILGWGYQpERLQAGVYLIFYTLVAS 151
Cdd:PRK08676 91 LSNGELDPENLKVFYLGFNL----LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAM 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 152 LPL---LIVLFKIN---LIIGSLFFPLFVDFGSFY-----FMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILA 220
Cdd:PRK08676 166 IFAfigLIFLFSLTrqaLGTGTLNWTELAAHASLLspsvlGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 221 GVLLKLGGYGIFRVMSVI--TFLGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVF 298
Cdd:PRK08676 246 GTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALF 325
|
330 340
....*....|....*....|....*....
gi 304322861 299 GSLSLMVGHGLCSSGLFCLSNIIYERLGS 327
Cdd:PRK08676 326 WMLFHMLAHSLVKSGLFFSAGILHRQYRS 354
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-345 |
6.80e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 67.30 E-value: 6.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 181 FMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYFWLSLSMS----- 255
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSPIliilg 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 256 --GGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLIN 333
Cdd:PRK12667 303 avSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170
....*....|..
gi 304322861 334 KCLINLMPSMSL 345
Cdd:PRK12667 383 AGLGRKMPIASF 394
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
186-375 |
1.03e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.49 E-value: 1.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 186 FIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRV-MSVITFLGVKF-NYFWLSLSMSGGVIVSFI 263
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYyILIDAAIGSDFpGRLLLIFGLLSVLVAAFF 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 264 CFCQINLKSLIAYSSVAHMSMV-----IGGLMsmnwwGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLIN 338
Cdd:PRK06458 299 LLRQRDIKRLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLK 373
|
170 180 190
....*....|....*....|....*....|....*...
gi 304322861 339 LMPSMSlWWFQLSSSNMAAPPSFNL-VGELSLLNSIIS 375
Cdd:PRK06458 374 VSPLTG-WGLMLGALAIAGMPPFGVfISEFLILTAGLA 410
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
21-374 |
3.22e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 65.14 E-value: 3.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 21 WWIVHSLMFLISFIFMLNFYLCTDFNMISCFFGVDYF-------SFYLILLSFWVCSLMLTSSSSIYNLN-----NYSCL 88
Cdd:PRK08667 36 WLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITfhidrlaAFFIILIGLVSLCVAIYSLGYNEHMSsneraNLLSA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 89 FNFVILFLMIMLYCSFSSMSlmmFYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSL 168
Cdd:PRK08667 116 LTALFILSMLGVVASANTFS---FLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 169 FFPLFVDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYF 248
Cdd:PRK08667 193 ELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 249 WLSLSMSGGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLM-----------VGHGLCSSGLFCL 317
Cdd:PRK08667 273 ILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLT 352
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 304322861 318 SNIIYERLGSRSMLINKCLINLMPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSII 374
Cdd:PRK08667 353 AGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
2.90e-09 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 54.45 E-value: 2.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 1 MLKYLFMIIFLIPLSFL-----WCFWWIVHSLMFLISFIFMLNFYLCTDFNMISCFFGVDYFSFYLILLSFWVCSLMLTS 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLskpkwLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 304322861 76 SSSIYNL--NNYSCLFNFVILFLMIMLYCS 103
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-324 |
7.77e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 57.65 E-value: 7.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 104 FSSMSLMMFYIFFEASLVPTLLLIlGWGYQPERLQAGVYLIFYTLVASLPLLI---VLFKINliiGSLFFPLFVDFGSFY 180
Cdd:PRK07234 111 FVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIgavLVYQAN---GTFAFSGLATADPEA 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 181 FMFylfIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYFWLSLSMSGgviv 260
Cdd:PRK07234 187 FAL---IALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG---- 259
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 304322861 261 SFICFCQINLKSLIAYSSVAHMSMVIGGLMsmnwWGVFGSLSlmvgHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 260 VLFALLEKDLKRMLAFSTISQLGFILAAPL----VGGLYALA----HGLVKSTLFLCAGALPSR 315
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-375 |
1.77e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.28 E-value: 1.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 185 LFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVI-----TFLGVKFNYFWLSLSMSGGVI 259
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 260 VSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINL 339
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190
....*....|....*....|....*....|....*.
gi 304322861 340 MPSMSLWWFQLSSSNMAAPPSFNLVGELSLLNSIIS 375
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-330 |
9.75e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.78 E-value: 9.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 109 LMMFYIFFEASLVPTLLLILGWGYQPERLQAGvylIFYTLVASLPLLIVLFKINLIIG---SLFFPLFVDFGSFYFMFYL 185
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAG---IKYMFVGSLASSMVLLGIALLYGqygTLNMAYLAVKMSENPTVVA 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 186 FIVLAFLV-----KMPMFLVHLWLPSAHVEAPISGSMILagVLLKLGG-YGIFRVmsVITFLGVKFNYF---WL-----S 251
Cdd:PRK08376 220 KIALALFIaglamKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINLAtvgWViiilgC 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 252 LSMSGGVIVSFIcfcQINLKSLIAYSSVAH---------MSMVIGGLMSMNWWG---VFGSLSLMVGHGLCSSGLFCLSN 319
Cdd:PRK08376 296 LTMFVGVAMAVV---QKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAG 372
|
250
....*....|.
gi 304322861 320 IIYERLGSRSM 330
Cdd:PRK08376 373 AVIYETGTRNL 383
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-315 |
1.87e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 46.68 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 187 IVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVITFLGVKFNYFWLSLSMSGGVIV--SFIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFfaELSA 291
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 304322861 265 FCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLF 315
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLF 342
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
184-341 |
2.90e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 46.42 E-value: 2.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 184 YLFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFRVmsVITFLGVKfNYFW--LSLSMSGGVIVS 261
Cdd:PRK06521 213 FLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGAP-GWWWgvLVLALGAISAVL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 262 FICFC--QINLKSLIAYSSVAH-----MSMVIGGLMSMNWWGVFGSLSLMVG------HGLCSSGLFCLSNIIYERLGSR 328
Cdd:PRK06521 290 GVLYAlaEHDLKRLLAYSTIENigiifVGLGLAMVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTR 369
|
170
....*....|...
gi 304322861 329 SMLINKCLINLMP 341
Cdd:PRK06521 370 DMEKLGGLIRRMP 382
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-328 |
4.65e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 45.58 E-value: 4.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 58 SFYLILLSF-WVCSLMLTSSSSIYNLNNYSCLFNFVILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLIlGWGYQPER 136
Cdd:PRK06589 86 LIFLLLIGFlWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNIS 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 137 LQAGV-YLIFYTLVASLPLLIVLFKINLIIGSLFFPLFVDFGSFYFMFYLFIVLAFLVKMPMFLVHLWLPSAHVEAPISG 215
Cdd:PRK06589 165 LSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 216 SMILAGVLLKLGGYGIFRVMSVITFLGVKFNYF----WLSLSMSGGVIV-SFICFCQINLKSLIAYSSVAHMSMVIGGLM 290
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnWLIFIPIVSIFYsSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270
....*....|....*....|....*....|....*...
gi 304322861 291 SMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSR 328
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKED 362
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
89-362 |
6.33e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 45.52 E-value: 6.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 89 FNFVILFLMIMLYCSFSSMSLMMfYIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSL 168
Cdd:PRK12646 113 YFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 169 FFPLFV-------DFGSFYFMFYLFIVLAFlVKMPMFLVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGIFRVMSVITf 240
Cdd:PRK12646 192 NITEILgqadhikNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 241 LGVKFNYFWLSLSMSGGVIVSFICFCQINLKSLIAYSSVAH----MSMV-IGGLMSMNWWG---------VFGSLSLMVG 306
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDaiasiyvfvLFAALFHLMN 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 304322861 307 HGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMSLwWFQLSSSNMAAPPSFN 362
Cdd:PRK12646 349 HAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-366 |
1.57e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 200 VHLWLPSAHVEAPISGSMILAGVLLKLGGYGIFrvmsVITFLGVKFNYFWLSLSMSGGVIVSFI----CFCQINLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 276 YSSVAHMSMVIGGL------MSMNW-----WGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSMLINKCLINLMPSMS 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180
....*....|....*....|..
gi 304322861 345 LWWFQLSSSNMAAPPSFNLVGE 366
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGE 376
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-315 |
3.29e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 39.80 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 185 LFIVLAFLVKMPMFLVHLWLPSAHVEAPISGSMILAGVLlKLGGYGIFRVMSVITFLGVKF---NYFWLS--LSMsggVI 259
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLLRLLVVAFGGLSEdwqQVLAIIaiASM---LV 283
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 304322861 260 VSFICFCQINLKSLIAYSSVAHMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLF 315
Cdd:PRK05777 284 GNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-329 |
3.49e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.55 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 52 FGVDYFSFYLILL-SFWVCSLMLTSSSSIYNLNNYSCLFNFvILFLMIMLYCSFSSMSLMMFYIFFEASLVPTLLLILgW 130
Cdd:PRK12663 73 FTGDSLSALMVTTaSFVATAIMAYGFGDIEHSGRRYGFPPF-ILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-L 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 131 GYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSLFFPLF------VDFGSFYFMFYLFIVLAFLVKMPMFLVHlWL 204
Cdd:PRK12663 151 GQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALLFLLAFGMKAALFPFM-WL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 205 PSAHVEAPISGSMILAGVLLKLGGYGIFRVMSVI----TFLGVKFNYFWLSLSMSGGVIVSficFCQINLKSLIAYSSVA 280
Cdd:PRK12663 230 PAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIGALGA---LAYKDIRRIAGYQVIS 306
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 304322861 281 HMSMVIGGLMSMNWWGVFGSLSLMVGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK12663 307 SIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRS 355
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-370 |
3.51e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 40.03 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 188 VLAFLV------KMPMFLVHLWLPSAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMSVitflgvkFNYFWLSLSMS 255
Cdd:PRK12650 209 VVAVLIavaaftKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 256 GGVIVSFICFCQINLKSLIAYSSVAHMSMVIGGLmsmnwwGVFGSLSL------MVGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATI------GVGTPFALtaavvhTLAHALFKSSLFMLIGVVDHQAGTRD 355
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 304322861 330 MLINKCLINLMPsMSLWWFQLSSSNMAA-PPSFNLVGELSLL 370
Cdd:PRK12650 356 IRRLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGML 396
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
89-283 |
8.30e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 38.66 E-value: 8.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 89 FNFVILFLMIMLYCSFSSMSLMMFyIFFEASLVPTLLLILGWGYQPERLQAGVYLIFYTLVASLPLLIVLFKINLIIGSL 168
Cdd:PRK12649 114 YQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 304322861 169 FFPLFVDFGS---------FYFMFYLFIVLAFLVKMPMFLVHLWLPSAhVEAPISGSMIL-AGVLLKLGGYGIFRVMSVi 238
Cdd:PRK12649 193 DIATILQDSElienikghpLFLITLILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPI- 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 304322861 239 tFLGVKFNYFWLS-LSMSGGVIVSFICFCQINLKSLIAYSSVAHMS 283
Cdd:PRK12649 271 -FSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
|
| |
