|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-521 |
6.36e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 286.65 E-value: 6.36e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 1 MIIINLFKIFLMIFLVMSLIIMNNTFLMNFQMLIILNEMFLNLYK-NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNM 79
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSiVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 80 NKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIY--- 156
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWmmn 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 157 -----------STINLNSFKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFSK 225
Cdd:MTH00165 161 fgswnfifyldFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 226 TNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNF 305
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 306 SNQ-LKFNMLNKNMCSNFILSYKVSCLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFN 384
Cdd:MTH00165 321 NSQdIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 385 KSNFKIKKNNMFEKKNY--SKSFFLMNIFSIFYSKIM-------VEMILFVNMMNSLIMTFYLISMMMNFKIYSKKINFT 455
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKfmLKSMILLLFMSIFGGSMLswlifpePYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 302632636 456 SSLAYTEFNM----------YIYPFKMIKYNLDINELWMEKISLNFYFLMKNKIIFKTFNMNFNLIMMLFIIMMFI 521
Cdd:MTH00165 481 LKSLKNYKLSsflgsmwfmpFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKI 556
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
11-520 |
1.49e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 186.28 E-value: 1.49e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 11 LMIFLVMSLIIMNNTFLMNFQMLIILNEMFLNLYKNFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMT 90
Cdd:MTH00095 3 ILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 91 KIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILM---SMIYSTINLNSFKMV 167
Cdd:MTH00095 83 LIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLffsGFIFSSYYFFSFSFF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 168 G----LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFSKTNLNLITNLCLLSMFISG 243
Cdd:MTH00095 163 SssmiLMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 244 FKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQLKFNMLNKNMCSNFI 323
Cdd:MTH00095 243 LSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 324 -LSYKVSCLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFEKKNYS 402
Cdd:MTH00095 323 qLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSSVLMNF 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 403 KSFFLMNIFSIFYSKIMVEMILFVNMMNSL-------IMTFYLISMMMNFKIYSKKINFTSSLAYTEFNMYIYPFKMIKY 475
Cdd:MTH00095 403 LSLMLVFFSVFFLWWLNFNLLNLPSLFLYLdfyvplfYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFF 482
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 302632636 476 NLDINELWMEKISLNFYFLMKNKIIFKTFNMNFNLIMMLFIIMMF 520
Cdd:MTH00095 483 DLFLNKFGYKGFNFFSSFSFFFFSYMKSFKYNSLLILLFLIFLFL 527
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
6-449 |
5.86e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 185.43 E-value: 5.86e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 6 LFKIFLMIFLVMSLIIMNNTFLMNFQmliILNEMFLNLykNFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKV 85
Cdd:MTH00151 12 FSYSVFLFPLLGYFGLNGISLIFEWE---LLSVSSCSF--SFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 86 FFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSM----------I 155
Cdd:MTH00151 87 FMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIallvllghwsI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 156 YSTINLNSFKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFSKTNLNLITNLC 235
Cdd:MTH00151 167 LSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 236 -LLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQLKFNML 314
Cdd:MTH00151 247 sLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLG 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 315 NKNMCSNFILSY-KVSCLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMM--LFFNKSNFKIK 391
Cdd:MTH00151 327 SLFLSLPLTSGClNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSfcLVWGSMKSSSL 406
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 302632636 392 KNNMFEKKNYSKSFFLMNIFSIFYSKIMVemiLFVNMMNSLIMTFYLISMMMNFKIYS 449
Cdd:MTH00151 407 SSKSDEDFYVSLPMLLLSLGALIGGKLLQ---SLFEGFSEEFFLPSYLKLLIGFVILL 461
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
3-521 |
9.03e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 168.98 E-value: 9.03e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 3 IINLFKIFLMIFLVMSLIIMNNTFLMNFQMLIILNEMFLNLykNFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKN 82
Cdd:MTH00211 31 IKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSL--NLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPN 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 83 MKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINL 161
Cdd:MTH00211 109 INRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLIsWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 162 NSFKMVG------------LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLiNNFFSKTNLN 229
Cdd:MTH00211 189 NSWEISQlfilnldltlflLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRL-SPLFQNNQLI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 230 LITNLCL--LSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSN 307
Cdd:MTH00211 268 LGAVLLLgaLTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 308 Q--LKFNMLNKNMCSNFILSYkVSCLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLF--- 382
Cdd:MTH00211 348 QdiRKMGGLSKNLPFTSSCLF-LGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLslg 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 383 -FNKSNFKIKKNNMFEKKNY--------SKSFFLMNIFSIFYSKIMVEMILFVNMMNSLIMTFYLISMMMNFkIYSKKIN 453
Cdd:MTH00211 427 gYPRFLSLSPINENYKLLKNplkrlalgSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLEL-VNLTHKQ 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 454 FTSSLAYTEFNMYIYPFKMIKYNLDINELWMEKISLNFYFLMKNKII-----------------------FKTFNMNFNL 510
Cdd:MTH00211 506 LKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLgpkglgvnqkkliklvtspqqglIKSYLALLLL 585
|
570
....*....|.
gi 302632636 511 IMMLFIIMMFI 521
Cdd:MTH00211 586 SLLLILLLFLL 596
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
46-389 |
6.44e-45 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 166.87 E-value: 6.44e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI- 124
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIg 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FYYNNFESWKSAIKTFINNKMGD-CLIL-MSMIYSTINLNSFKMV----------------GLMFLISMMTKSAQYPFMS 186
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDlGLLLgILLLGAIAGTLNFSELlaaaptilssplltliLLLLLLGAFGKSAQFPLHF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 187 WLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLiNNFFSKTN--LNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQI 264
Cdd:COG1009 233 WLPDAMEGPTPVSALLHAATMVKAGVYLLARL-SPLFALSPvwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 265 SLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNfSNQLKFNM--LNKNMCSNFILsYKVSCLNLMNMPFFSSF 342
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMggLRKKMPITAIT-FLIGALSLAGIPPFAGF 389
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 302632636 343 FIKEKMLMK-LSSNFFSMMKFTIFMVSSFFTMNYSLKM--MLFFNKSNFK 389
Cdd:COG1009 390 FSKEAILEAaLEAGGLGPLLLAVALLGAFLTAFYSFRLffLVFFGKPRPK 439
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-495 |
2.19e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 162.43 E-value: 2.19e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 1 MIIINLFKIFLMIFLVMSLIIMNNTFLMNFQMLIILNeMFLNLY--------------------------KNFILVMDIY 54
Cdd:MTH00211 2 NTIFNSGFLLILILLLLPLLLPLNNSKLHIKKAVKLS-FFISLIpllifldqgletiltnwswinlglfsLNLSFKFDFY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 55 SSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNFESW 133
Cdd:MTH00211 81 SIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLIsWWYGRSDAN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 134 KSAIKTFINNKMGDCLILMSMIYSTINLNSFKMVG------------LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAM 201
Cdd:MTH00211 161 TAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQlfilnldltlflLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 202 VHSSTLVTAGLFIMFRLiNNFFSKTNLNLITNLCL--LSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIA 279
Cdd:MTH00211 241 LHSSTMVVAGVFLLIRL-SPLFQNNQLILGAVLLLgaLTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 280 FIYMCNHAFFKSLIFINMGLMMMNNFSNQ--LKFNMLNKNMCSNFILSYkVSCLNLMNMPFFSSFFIKEKMLMKLSSNFF 357
Cdd:MTH00211 320 FLHICTHAFFKAMLFMCSGSIIHGLNNEQdiRKMGGLSKNLPFTSSCLF-LGSLALMGFPFLSGFFSKDLILESMNGSYL 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 358 SMMKFTIFMVSSFFTMNYSLKMMLF----FNKSNFKIKKNNMFEKKNY--------SKSFFLMNIFSIFYSKIMVEMILF 425
Cdd:MTH00211 399 NAWALLLTLLATSLTAAYSFRLIFLslggYPRFLSLSPINENYKLLKNplkrlalgSILAGFIITSNLPPEKPEILSLPF 478
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 426 VNMMNSLIMTFYLISMMMNFkIYSKKINFTSSLAYTEFNMYIYPFKMIKYNLDINELWMEKISLNFYFLM 495
Cdd:MTH00211 479 LLKLMPLLVTIVGLLLGLEL-VNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLG 547
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
6-381 |
1.07e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 160.32 E-value: 1.07e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 6 LFKIFLMIF-LVMSLIIMNNTFLMNFQMLIILNEMFlnlykNFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMK 84
Cdd:MTH00207 14 LWFMSILMFpLSLYLMMCNKTILIEWEIFTISSSPI-----NFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 85 VFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSM---------- 154
Cdd:MTH00207 89 RFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIgwtlnqghws 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 155 IYSTINLNSFKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLInNFFSKTNL--NLIT 232
Cdd:MTH00207 169 ITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFY-PFLSSTYWfnPALL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 233 NLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMM----------- 301
Cdd:MTH00207 248 LTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIhshhhsqdlrt 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 302 MNNFSNQLKFNMlnknmcsnfilsykvSCLNLMNM-----PFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYS 376
Cdd:MTH00207 328 MGNLTNQMPLTT---------------SCLLIANLalcgsPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392
|
....*
gi 302632636 377 LKMML 381
Cdd:MTH00207 393 TRFTL 397
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
8-419 |
8.52e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 157.50 E-value: 8.52e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 8 KIFLMIFLVMSLIIMNNTFLMNFQMLIILNEMFLNLYKNFI---LVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMK 84
Cdd:MTH00209 4 MQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSIsfpLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 85 VFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMS----------- 153
Cdd:MTH00209 84 RFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSiawmlmhgnwn 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 154 MIYSTINLNSFKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFSKTNLN-LIT 232
Cdd:MTH00209 164 IFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSmSLL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 233 NLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQ--LK 310
Cdd:MTH00209 244 LLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQdiRM 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 311 FNMLNKNMCSNFIlSYKVSCLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLF--FNKSNF 388
Cdd:MTH00209 324 VGNLWYQMPITSI-CLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFslWGPNSS 402
|
410 420 430
....*....|....*....|....*....|.
gi 302632636 389 KIKKNNMFEKKNYSKSFFLMNIFSIFYSKIM 419
Cdd:MTH00209 403 KSLNSSFDQNKLNLKPMLVLTLGSITGGSVM 433
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
46-382 |
4.47e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 150.51 E-value: 4.47e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI- 124
Cdd:TIGR01974 76 DFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIg 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFK-----------------MVGLMFLISMMTKSAQYPFMSW 187
Cdd:TIGR01974 156 FWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNfqevfalapgaffsaltLICLLLFIGAMGKSAQLPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 188 LPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISL 266
Cdd:TIGR01974 236 LPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFeLSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGY 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 267 IFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMM--MNNFSNQLKFNMLNKNMCSNFIlSYKVSCLNLMNMPFFSSFFI 344
Cdd:TIGR01974 316 MFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIhaMHHEQDIRKMGGLRKKMPVTYI-TFLIGSLALIGFPGFAGFFS 394
|
330 340 350
....*....|....*....|....*....|....*...
gi 302632636 345 KEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLF 382
Cdd:TIGR01974 395 KDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFM 432
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-382 |
3.91e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 133.11 E-value: 3.91e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 1 MIIINLFKIFLMIFLVMSLIIMNN---TFLMNFQMLIILNemfLNLYKNFILvmDIYSSSFFFIVSIVVMNVLSFMNIYM 77
Cdd:MTH00066 32 TNVKTSVKTAFFISLIPLMIFINQgleSITTSFHWMNIFN---FNINSSFKF--DQYSIIFLPIALFVTWSILEFAIWYM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 78 NMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNFESWKSAIKTFINNKMGDCLILMSMIY 156
Cdd:MTH00066 107 HSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAW 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 157 STINLNSFKMVG------------LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRlINNFFS 224
Cdd:MTH00066 187 LAMNTNSWELQQifllndnstlplLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIR-FHPLLE 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 225 KTNLNLITNLCL--LSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMM 302
Cdd:MTH00066 266 NNQTALTICLCLgaLTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIH 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 303 NNFSNQ--LKFNMLNKnmcsnfILSYKVSCLN-----LMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNY 375
Cdd:MTH00066 346 SLNDEQdiRKMGGLQK------ALPITTSCLTigslaLTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVY 419
|
....*..
gi 302632636 376 SLKMMLF 382
Cdd:MTH00066 420 SFRIIYF 426
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
10-387 |
4.15e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 132.31 E-value: 4.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 10 FLMIFLVMSLIIMNNTFLMNFQmliILNEMFLNLYKNFilVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFM 89
Cdd:MTH00063 7 LLLCLLIFFLFLVGVSSSVSLN---FLSFGGYSWLINF--DFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 90 TKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGD-CLILMSMIYSTINLNSFkMVG 168
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDvCLFLLIGLSCWGGSGSF-LCC 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 169 LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFSKTNLNLITNLCLLSMFISGFKAMS 248
Cdd:MTH00063 161 LFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 249 EKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQLKFNMLNKNMCSNFILSYKV 328
Cdd:MTH00063 241 FSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLF 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 329 SC-LNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSN 387
Cdd:MTH00063 321 LLvLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVK 380
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
42-386 |
7.50e-32 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 129.51 E-value: 7.50e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 42 NLYKNFILVMDIYSSSFFFIVSIVvmnvlSFM-NI----YMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGL 116
Cdd:PRK06590 73 DFDVDFGLRVDGLSATMLVVVTGV-----SFLvHIysigYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 117 GMSSFFLI-FYYNNFESWKSAIKTFINNKMGDCLILMSMI----------YSTINLNSFKM----------VGLMFLISM 175
Cdd:PRK06590 148 GLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFllfaefgslnYDEVFAAAPQFfglgwsaltlICLLLFIGA 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 176 MTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLITNLCLLSMFISGFKAMSEKDMKK 254
Cdd:PRK06590 228 MGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFeLSPEALLFVAIVGAVTALFAAFIGLVQTDIKR 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 255 MIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMM--MNNFSNQLKFNMLNKNMCSNFILSYkVSCLN 332
Cdd:PRK06590 308 VLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIhaMHHEQDIRKMGGLRKKMPVTYATFL-IGTLA 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 302632636 333 LMNMPFFSSFFIKEKMLMKLSSNfFSMMKFTIFMVSSFFTMNYSLKMML--FFNKS 386
Cdd:PRK06590 387 LIGIPPFAGFFSKDEILEAAFAN-GHINLFVAGLVGAFLTAFYSFRLIFlvFHGKE 441
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
5-382 |
2.81e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 127.78 E-value: 2.81e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 5 NLFKIFLMIFLVMSLIIMNNTFLMNFQMLIILNEMFLNLYK---NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNK 81
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCPNINISLSNWLSNTLfnfSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 82 NMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNN-FESWKSAIKTFINNKMGDCLILMSMIYSTIN 160
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTrNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 161 LNSFKMVGLMF----------------LISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-F 223
Cdd:MTH00208 216 FNSWNLNEILSlnnsnsflinillfgiLLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIsN 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 224 SKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGlMMMN 303
Cdd:MTH00208 296 SPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSG-SIIH 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 304 NFSNQLKfnmLNKNMCSNFILSYKVSC-----LNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLK 378
Cdd:MTH00208 375 SLNNEQD---LRKMGGLSFLLPVTSSCiilgsLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFR 451
|
....
gi 302632636 379 MMLF 382
Cdd:MTH00208 452 IIFF 455
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
8-382 |
6.28e-31 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 126.43 E-value: 6.28e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 8 KIFLMIFLVMSLIIMNN---TFLMNFQMLIILNEmflNLYKNFIlvMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMK 84
Cdd:MTH00004 41 KLAFLISLIPLTLFLNSgteSITTNWPWIFTTTF---NIPISFK--LDQYSLMFLPIALFVTWSILEFSTWYMASDPHIT 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 85 VFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNS 163
Cdd:MTH00004 116 KFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIgWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNT 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 164 FKMVGLM------------FLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLiNNFFSKTNLNLI 231
Cdd:MTH00004 196 WEIQQLFsptqtptlpllgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRT-HPLLQNNQTALT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 232 TNLCL--LSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMM--MNNFSN 307
Cdd:MTH00004 275 ICLCLgaLTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIhnLNNEQD 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 308 QLKFNMLNKNMCsnfILSykvSCLN-----LMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLF 382
Cdd:MTH00004 355 IRKMGGLQKTLP---ITS---SCLTignlaLMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILL 428
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-428 |
3.63e-30 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 124.42 E-value: 3.63e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI- 124
Cdd:MTH00020 73 YFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLIn 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNS------FKMVG-----------LMFLISMMTKSAQYPFMSW 187
Cdd:MTH00020 153 FWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSldfssvFNMVVsapssditlicLFLFIGAVGKSAQLGLHTW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 188 LPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISL 266
Cdd:MTH00020 233 LPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFeQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGY 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 267 IFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMM--MNNFSNQLKFNMLNKNMCSNFILsYKVSCLNLMNMPFFSSFFI 344
Cdd:MTH00020 313 MVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIhaLSDEQDMRKMGGLISFLPLTYIF-FLIGSLSLMGFPYLTGFYS 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 345 KEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFEKK----NYSKSFFLMNIFSIFYSKIMV 420
Cdd:MTH00020 392 KDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHegdwNLLLPLGILALGSIFVGYLAK 471
|
....*...
gi 302632636 421 EMILFVNM 428
Cdd:MTH00020 472 EMIWSFQI 479
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
52-295 |
3.95e-30 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 124.17 E-value: 3.95e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 52 DIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNF 130
Cdd:MTH00137 87 DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 131 ESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKM-------------VGLMFLISMMT-KSAQYPFMSWLPMAMAAPT 196
Cdd:MTH00137 167 DANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIqqifalskdfdltLPLLGLILAATgKSAQFGLHPWLPSAMEGPT 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 197 PISAMVHSSTLVTAGLFIMFRLiNNFFSKTNLNLITNLCL--LSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINN 274
Cdd:MTH00137 247 PVSALLHSSTMVVAGIFLLIRL-SPLMENNQTALTTCLCLgaLTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 325
|
250 260
....*....|....*....|.
gi 302632636 275 MKIIAFIYMCNHAFFKSLIFI 295
Cdd:MTH00137 326 QPQLAFLHICTHAFFKAMLFL 346
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
16-349 |
4.10e-29 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 121.60 E-value: 4.10e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 16 VMSLIIMNN----TFLMNFQMLIILNEMFLNLYK---------NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKN 82
Cdd:MTH00032 30 ILSTICMGSstliALFLAYEVLINDAVVHIELYKwieseifitHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 83 MKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNFESWKSAIKTFINNKMGDCLILMSM--IYSTI 159
Cdd:MTH00032 110 VPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVaFWTTRIQANKAAIKAIVVNRVGDVGVILGMvlIYKTI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 160 N------------------------------LNSFKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVT 209
Cdd:MTH00032 190 GsldfltfnggsvgsgimdrgyygggayespLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 210 AGLFIMFRLInNFFSKTNLNL--ITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQIS-LIFFFLINNMKIIAFIYMCNH 286
Cdd:MTH00032 270 AGVFLMIRSF-PLFEKAPLTLliITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGyMVLIIGIEGSHNVGLFHLVNH 348
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 302632636 287 AFFKSLIFINMGLMMMNNFSNQLKFNMLNkNMCSNFILSYK---VSCLNLMNMPFFSSFFIKEKML 349
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTTVDEQDMRKMG-GLIHSIPFTYTmmlIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-301 |
5.56e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 112.93 E-value: 5.56e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 47 FILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFY 126
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 127 YNNFESWKSAIKTFINNKMGDCLILMS--MIYST---------------INLNSFKMVGLMFLISMMTKSAQYPFMSWLP 189
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGvgLLYGAtgtlnmadlaarlaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 190 MAMA-APTPISAMVhSSTLVTAGLFIMFRLINNFFSKTNLNLITNLCL----LSMFISGFKAMSEKDMKKMIALSTLSQI 264
Cdd:COG0651 230 DAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFLGTLLLvlglLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 302632636 265 SLIFFFL-INNMKII--AFIYMCNHAFFKSLIFINMGLMM 301
Cdd:COG0651 309 GYILLGLgLGTPLGLagALFHLLNHALAKALLFLAAGAIE 348
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
46-380 |
2.49e-25 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 110.23 E-value: 2.49e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNK-NMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI 124
Cdd:PRK12646 71 NLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FY-YNNFESWKSAIKTFINNKMGDCLILMS--MIYSTINLNS----------------FKMVGLMFLISMMTKSAQYPFM 185
Cdd:PRK12646 151 SYwYNNGDSQFGAIQSFMITVFGGLALLVGfiMLYIMTGTNNiteilgqadhiknhglFIPMIFMFLLGAFTKSAQFPFH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 186 SWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQI 264
Cdd:PRK12646 231 IWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 265 SLI--------------------FFFLInnmKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQLKFNMLNKNMCSNFIL 324
Cdd:PRK12646 311 GMImamvgigggyaqhqqdaiasIYVFV---LFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 302632636 325 SYKVSCLNLMNMPFFSSFFIKEKMLMKLSSN--------FFSMMKFTIFMVSSFFTMNYSLKMM 380
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfslISMIIIVFIGVIASIFTFTYALYMV 451
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
46-470 |
4.91e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 108.94 E-value: 4.91e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI- 124
Cdd:MTH00210 73 YFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLIn 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FYYNNFESWKSAIKTFINNKMGDCLILMSMI----------YSTI--------NLNSFKMVGLMFLISMMTKSAQYPFMS 186
Cdd:MTH00210 153 FWLTRIKANKAAIKAMLINRVGDIGLVLAMImilkefgtleFSTIssllvtniNKESLTIICLLLFIGAVGKSAQLGLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 187 WLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQIS 265
Cdd:MTH00210 233 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFeGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 266 LIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMM--MNNFSNQLKFNMLNKNMCSNFILSYkVSCLNLMNMPFFSSFF 343
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIhaVSDEQDMRKMGGLIKSIPFTYVMIL-IGSLSLMGFPYLTGFY 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 344 IKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFEKKNYSKS----FFLMNIFSIFYSKIM 419
Cdd:MTH00210 392 SKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNitfpLLLLAFGSIFVGYLG 471
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 302632636 420 VEMIL---FVNMMNSLI----MTFYLISMMMNFKIYSKKiNFTSSLAYTEFNMYIYPF 470
Cdd:MTH00210 472 KEVVLsnvIPPIVPNSIkmipLLFSLLGALLAFVIYNSM-VFLIKISRRGVSIRLYHV 528
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
46-298 |
1.00e-24 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 108.59 E-value: 1.00e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMN-KNMKVFFFMTkIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI 124
Cdd:PRK12650 72 NLALRADALSLFFALLALVIGAVVFIYSARYLPRKkGNTSFYLLMT-AFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FyynnfESWKS----AIKTFINNKMGDCLILMSMIYS-----TINL-----------NSFKMVGLMFLISM--MTKSAQY 182
Cdd:PRK12650 151 A-----RSGSGgeagSIRTLILTFFGGLTLLAAVAIAatqtgTTSLsgilhsdvwaeKPGLTTVVAVLIAVaaFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 183 PFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLiNNFFSKT---NLNLITnLCLLSMFISGFKAMSEKDMKKMIALS 259
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRF-SPVFHDVavwNWLLII-VGMITALMGAVFAVQKTDLKKLTAYS 303
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 302632636 260 TLSQISLIF--------FFLinnmkIIAFIYMCNHAFFKSLIFINMG 298
Cdd:PRK12650 304 TVSQLGWIVatigvgtpFAL-----TAAVVHTLAHALFKSSLFMLIG 345
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
51-382 |
2.19e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 106.86 E-value: 2.19e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 51 MDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNN 129
Cdd:MTH00108 82 LDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGR 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 130 FESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKM------------VGLM-FLISMMTKSAQYPFMSWLPMAMAAPT 196
Cdd:MTH00108 162 TDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLqqifmlnpnnsnLPLMgLLLAATGKSAQFGLHPWLPSAMEGPT 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 197 PISAMVHSSTLVTAGLFIMFR----LINNffsKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLI 272
Cdd:MTH00108 242 PVSALLHSSTMVVAGVFLLIRfhplMENN---KTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 273 NNMKIIAFIYMCNHAFFKSLIFINMGLMM--MNNFSNQLKFNMLNKNM---CSNFIlsykVSCLNLMNMPFFSSFFIKEK 347
Cdd:MTH00108 319 INQPHLAFLHICTHAFFKAMLFMCSGSIIhnLNDEQDIRKMGGLFKTLpftSTALI----IGSLALTGMPFLTGFYSKDL 394
|
330 340 350
....*....|....*....|....*....|....*
gi 302632636 348 MLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLF 382
Cdd:MTH00108 395 IIEAANTSYTNAWALLITLIATSLTAAYSTRIIFF 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-294 |
3.02e-24 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 106.93 E-value: 3.02e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI- 124
Cdd:PRK12647 57 NLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIg 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKMVGLM------------------FLISMMTKSAQYPFMS 186
Cdd:PRK12647 137 FNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLasgdvirehplylailllVLGGAFTKSAQFPFHF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 187 WLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLiNNFFSKTNLNLITNLCL--LSMFISGFKAMSEKDMKKMIALSTLSQI 264
Cdd:PRK12647 217 WLPNAMEAPTPVSAYLHSATMVKAGIYLLARL-NPVLGGTPLWQTILPLFggLTMLTGALLAVRQTDLKLILAYSTVSAL 295
|
250 260 270
....*....|....*....|....*....|...
gi 302632636 265 SLIFFFL-INNMKII--AFIYMCNHAFFKSLIF 294
Cdd:PRK12647 296 GTLVMLLgLGSELAIkaAVLFLVAHSLYKGALF 328
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-298 |
5.73e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 105.88 E-value: 5.73e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVM----DIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSF 121
Cdd:PRK07376 80 DFHLPMgyviDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSY 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 122 FLI-FYYNNFESWKSAIKTFINNKMGDCLILMSMI---------------------YSTINLNSFKMVGLMFLISM--MT 177
Cdd:PRK07376 160 LLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGILglfwatgsfdfdgiadrlselVSSGAVSGWLALLLCILVFLgpMA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 178 KSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFI---MFRLINNFfsKTNLNLITNLCLLSMFISGFKAMSEKDMKK 254
Cdd:PRK07376 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLvarMYPVFEQF--PAVMTVIAWTGAITAFLGASIALTQNDIKK 317
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 302632636 255 MIALSTLSQISliffFLINNMKIIAFI----YMCNHAFFKSLIFINMG 298
Cdd:PRK07376 318 GLAYSTISQLG----YMVMAMGCGAYSaglfHLMTHAYFKAMLFLGSG 361
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-298 |
2.98e-23 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 102.74 E-value: 2.98e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 1 MIIINLFKIFLMIFLVMSLIIMNNTFLmnFQMLIILNEMFLnlyknFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMN-- 78
Cdd:PRK06525 30 GVLFAALTTLCMLSLAYAFYQAGKVAV--TLTLVNLGDVAL-----FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpg 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 79 -----MNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMS 153
Cdd:PRK06525 103 nrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLA 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 154 MIYSTINLNSFKM-------------VGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLI- 219
Cdd:PRK06525 183 AATLFLQTGTFALsalsglhgslkylVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIq 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 220 -NNFFSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLI-----NNMKIIAFI-YMCNHAFFKSL 292
Cdd:PRK06525 263 sMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSlailgSRLALEGSIaYIFNHAFAKSL 342
|
....*.
gi 302632636 293 IFINMG 298
Cdd:PRK06525 343 FFLVAG 348
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-298 |
8.18e-21 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 96.41 E-value: 8.18e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 76 YMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FYYNNFESWKSAIKTFINNKMGD-CL---- 149
Cdd:PRK12648 99 YLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIgYWHHRADARRGARMALTVTGAGGlALlagv 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 150 ILMSMIYSTINLNSFKMVG-------------LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMF 216
Cdd:PRK12648 179 LLLGHIVGSYDLDVVLAAGdlirahplyppalVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLA 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 217 RLInNFFSKTNL--NLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFL-INN-MKIIAFIY-MCNHAFFKS 291
Cdd:PRK12648 259 RLW-PVLAGTEEwfWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLgLGSpLAAVAAIFhIINHATFKA 337
|
....*..
gi 302632636 292 LIFINMG 298
Cdd:PRK12648 338 SLFMAAG 344
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
46-380 |
2.06e-20 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 94.91 E-value: 2.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLI- 124
Cdd:TIGR00940 68 NFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLIs 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 125 FYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKM------------------VGLMFLISMMTKSAQYPFMS 186
Cdd:TIGR00940 148 YWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIdaviasadairnsplfgtAMVLVLLGAFTKSAQFPFHI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 187 WLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFF-SKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQIS 265
Cdd:TIGR00940 228 WLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAgTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 266 LI----------FFFLINNMKII------AFIYMCNHAFFKSLIFINMGLMMMNNFSNQL-KFNMLNKNMCSNFILSYkV 328
Cdd:TIGR00940 308 LImvllglgspsYHYQGDDSKIYalaavaAVFHLINHATFKGSLFMAAGIIDHETGTRDIrKLGGLFHIMPITFTLAM-I 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 302632636 329 SCLNLMNMPFFSSFFIKEKMLMKL----SSNFFSMMKFT-----IFMVSSFFTMNYSLKMM 380
Cdd:TIGR00940 387 ASAAMAGVPPFNGFLSKEMFFAEAitahLVNPFDTVTLGylfpyVATVASVFTFVYSLRFI 447
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-380 |
1.42e-19 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 92.58 E-value: 1.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 46 NFILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIF 125
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 126 YYNNF-ESWKSAIKTFINNKMGDCLILM--------------------SMIYSTINLNSFKMVGLMF-LISMMTKSAQYP 183
Cdd:PRK12649 153 YWRHRpESVYGATKSLLITAGGGLFMFAgflllhvitgtydiatilqdSELIENIKGHPLFLITLILiFIGAAAKSAQGP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 184 FMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRlINNFFSKTN--LNLITNLCLLSMFISGFKAMSEKDMKKMIALSTL 261
Cdd:PRK12649 233 FYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVAR-IHPIFSGTEawFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 262 SQISLIFFFLINNMK-------IIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQL-KFNMLNKNMCSNFILSyKVSCLNL 333
Cdd:PRK12649 312 SQLAYLMTMYGYTTYhepglgvAAATFHLLNHATFKACLFLVAGIVAHEAATRDIrKLGGLRKEMPITFIVA-SIAALAM 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 302632636 334 MNMPFFSSFFIKEkMLMKLSSNF-------FSMMKFTIFMVSSFFTMNYSLKMM 380
Cdd:PRK12649 391 AGIPPLNGFLSKE-MFYETSVEMgaliggpFTIIIPAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-298 |
5.09e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 87.67 E-value: 5.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 93 FVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYY-NNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKMVGL-- 169
Cdd:PRK12644 115 FAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYaERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELla 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 170 -------------MFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLITNLC 235
Cdd:PRK12644 195 dpptgpavsvavvLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLG 274
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 236 LLSMFISGFKAMSEKDMKKMIALSTLSQISliffFLI-------NNMKIIAFIYMCNHAFFKSLIFINMG 298
Cdd:PRK12644 275 LATMLLGGWRALRQHDLKLILAYGTVSQLG----FLTvlvgigtRDAALAGLAMLLAHALFKAALFLVVG 340
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
92-433 |
5.20e-17 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 84.21 E-value: 5.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 92 IFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFE-----SWKSAIKT-FINNKMGDCLILMSMIYSTINLNS-- 163
Cdd:PRK12645 118 LFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREasrygAQKSMLITvFGGLSMLGGFILLYIMTGSFSIREmi 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 164 -----------FKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNF-FSKTNLNLI 231
Cdd:PRK12645 198 anadeiqnsplFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFaGSQVWFWTV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 232 TNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFL------------INNMKIIAFI----YMCNHAFFKSLIFI 295
Cdd:PRK12645 278 TLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLgigaaslhyqgdDSKIYAAAITaaifHLINHATFKGSLFM 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 296 NMGLMMMNNFSNQL-KFNMLNKNMCSNFILSYkVSCLNLMNMPFFSSFFIKEK----MLMKLSSNFFSMMKFTIFM---- 366
Cdd:PRK12645 358 IVGIVDHETGTRDIrKLGGLMTIMPITFTIAL-IGALSMAGLPPFNGFLSKEMffesMLNATEANLFSLDTWGVLFpvia 436
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 302632636 367 -VSSFFTMNYSlkmMLFFNKSNFKIKKNNMFEKKNYSKSfFLMNIFSIFYSKIMVEMILFVNMM-NSLI 433
Cdd:PRK12645 437 wVASVFTFVYS---IIFIFKTFFGKYKPEQLPKKAHEAP-IGMLISPIILASLVVVFGLFPNILtNSII 501
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-294 |
5.87e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 83.39 E-value: 5.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 49 LVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIF-VISMFLLVFSFNLWTMImgwEGLGMSSFFLIFYY 127
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAgLLGALLTADLFNLFVFL---EIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 128 NNFESWKSAIKTFINNKMGDCLIL--MSMIYS---TINLNSFK----------MVGLMFLISMMTKSAQYPFMSWLPMAM 192
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLigVGLLYGvtgTLNMADLAgalaenptvvTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 193 AAPTPISAMVHSSTLVTAGLFIMFRLINNFF------SKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISL 266
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVFggdfrfALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270
....*....|....*....|....*....|.
gi 302632636 267 IFF---FLINNMKIIAFIYMCNHAFFKSLIF 294
Cdd:PRK08375 310 ILLglaLLTPLALAAGLLHLLHHALMKGALF 340
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
103-345 |
6.48e-17 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 81.21 E-value: 6.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 103 SFNLWTMIMGWEGLGMSSFFLI-FYYNNFESWKSAIKTFINNKMGDCLILMSMIY------------------STINLNS 163
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLmynytgtlsfdelskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 164 FKMVGLMFLISMMTKSAQYPFMSWLPMA-MAAPTPISAMVhSSTLVTAGLFIMFRLINNFFSKTN--LNLITNLCLLSMF 240
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPfiQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 241 ISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKI---IAFIYMCNHAFFKSLIFI---NMGLMMMNNFSNQLKFNML 314
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLcagSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|.
gi 302632636 315 NKNmcSNFILSYKVSCLNLMNMPFFSSFFIK 345
Cdd:pfam00361 240 KTM--PILALVFLVAMLSLAGLPPTAGFLGK 268
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
79-414 |
8.08e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 72.55 E-value: 8.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 79 MNKNMKVFFFMTkIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIYST 158
Cdd:MTH00160 1 MMMNSSKLLFLS-TLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 159 INLNSFKMV-GLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFsktnlnlITNLCLL 237
Cdd:MTH00160 80 LNLMLFNNIsSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNF-------IIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 238 SMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIiAFIYMCNHAFFKSLIFINMGLMMMNNFSNQLKFNMLNKN 317
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENL-WLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 318 MCSNFILSYkvscLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFE 397
Cdd:MTH00160 232 IKFLLFLNL----LSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKK 307
|
330
....*....|....*..
gi 302632636 398 KKNYSKSFFLMNIFSIF 414
Cdd:MTH00160 308 KNKFSLILNFLSFISLF 324
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-388 |
8.20e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 70.62 E-value: 8.20e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 78 NMNKNMKVFFFMTKIFVISMFLlVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTF---INNKMGDCLILMSM 154
Cdd:PRK06589 111 NIDSSSRFLFFFNLTILIGVLI-ALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLkilMISALLLFLPAVIL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 155 IYSTINLNSFKMVG----------LMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFS 224
Cdd:PRK06589 190 IYTKTGNLDFVSGGlfsknqsiilLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 225 KTNL-------NLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIF---FFLINNMKIIAFIYMCNHAFFKSLIF 294
Cdd:PRK06589 270 LSYLqrifaefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLF 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 295 INMGLMMMNNFSNQLKFNMLNKNMCSNFILSYKVSCLNLMNMPFFSSFFIKEKMLMKLSSN---FFSMMKFTIFMVSSFF 371
Cdd:PRK06589 350 YSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSIL 429
|
330
....*....|....*..
gi 302632636 372 TMNYSLKMMLFFNKSNF 388
Cdd:PRK06589 430 SALYLLKILSSIYKPSL 446
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
25-345 |
3.98e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 68.44 E-value: 3.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 25 TFLMNFQMLIILNEMFLNLYKNFILVMDIYSSSFFFIVsivvMNVLSFM-NIYMNMNKNMKVFFFMTKIFVISMFLLVF- 102
Cdd:PRK07234 37 SAVYALGLVASMVPLELTLLDNFGVTLRADALSGYFIL----TNALVTLaVIFYCWESAKTRFFYAQLLILHGSVNAAFv 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 103 SFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKMVGLM-------FLISM 175
Cdd:PRK07234 113 CADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLAtadpeafALIAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 176 --MTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLInnFFSKTNLNLITNLCLLSMFISGFKAMSEKDMK 253
Cdd:PRK07234 193 glLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LDVPGLDLIVRIFGVGTALLGVLFALLEKDLK 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 254 KMIALSTLSQISLIFFflinnMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSnQLKFNMLNknmcSNFILSYKVSCLNL 333
Cdd:PRK07234 271 RMLAFSTISQLGFILA-----APLVGGLYALAHGLVKSTLFLCAGALPSRNFT-ELISQMLG----IGKWIPLTMASFSI 340
|
330
....*....|..
gi 302632636 334 MNMPFFSSFFIK 345
Cdd:PRK07234 341 AGFPLLAGFVSK 352
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
86-263 |
5.25e-12 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 68.38 E-value: 5.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 86 FFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAI-KTFINNKMGD----------------- 147
Cdd:CHL00025 124 FFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACqKAFVTNRVGDfglllgilgfywitgsf 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 148 -----CLILMSMIYS-TINLNSFKMVGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINN 221
Cdd:CHL00025 204 efrdlFEIFNNLIYNnEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 302632636 222 FfskTNLNLITNLCLLSMFISGF----KAMSEKDMKKMIALSTLSQ 263
Cdd:CHL00025 284 F---IVIPYIMNLISLIGIITALlgatLALAQKDIKRGLAYSTMSQ 326
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
165-350 |
1.05e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 67.10 E-value: 1.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 165 KMVGLMFLI-SMMTKSAQYPFMSWLPMA-MAAPTPISAMVhSSTLVTAGLFIMFRLINNFFSKTN----LNLITNLCLLS 238
Cdd:PRK08377 205 AQVGLALLIfGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGwssvLKLVIIMATLT 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 239 MFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKI---IAFIYMCNHAFFKSLIFINMGLMMMNNFSNQL-KFNML 314
Cdd:PRK08377 284 VFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTEIeKFEGL 363
|
170 180 190
....*....|....*....|....*....|....*.
gi 302632636 315 NKNMcSNFILSYKVSCLNLMNMPFFSSFFIKEKMLM 350
Cdd:PRK08377 364 GKRM-PLTALALTIGALSTVGIPLFNVFWSKFRIIL 398
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
47-298 |
7.58e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 58.20 E-value: 7.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 47 FILVMDIYSSSFFFIVSIVVMNVLSFMNIY---MNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFL 123
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 124 IFY-YNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFK------------MVGLMFLISMMTKSAQYPFMSWLPM 190
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFElsplgasagilsLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 191 AM-AAPTPISAMVhSSTLVTAGLFIMFRLINNFFSKTNL--NLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLI 267
Cdd:PRK08667 231 AHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGII 309
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 302632636 268 FF----------FLINNMKIIAFIYMC----NHAFFKSLIFINMG 298
Cdd:PRK08667 310 LMgiglyvifgvYGLDTLALLALGGALfhslNHALFKSLLFLTAG 354
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
87-298 |
1.47e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.21 E-value: 1.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 87 FFMtKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFL-IFYYNNFESWKSAIKTFINNKMGDCLILMSMI---------- 155
Cdd:PRK06521 117 FFY-NLFLASMVLVLLADDAFSFLVAWETMSLSSWFLvIANHREAEIRRAGFLYLLMAHAGALAILLAFGllaresgsyd 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 156 ---YSTINLNSFkMVGLMFLISMM---TKSAQYPFMSWLPMAM-AAPTPISAMVhSSTLVTAGLFIMFRLINNFFSKTNL 228
Cdd:PRK06521 196 faaMRAAHLSPF-WASLVFLLALFgfgAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 229 ---NLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFF-------FLINNMKIIAFI-------YMCNHAFFKS 291
Cdd:PRK06521 274 wwgVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVglglamvFIAYGMPLLAALaltaalyHLLNHALFKS 353
|
....*..
gi 302632636 292 LIFINMG 298
Cdd:PRK06521 354 LLFLGAG 360
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
69-298 |
7.28e-08 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 55.09 E-value: 7.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 69 VLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMS-SFFLIFYYNNFESWKSAIKTFINNKMGD 147
Cdd:PRK08168 85 IGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLAlHRLLCFYPDRPFARLAAHKKFIADRLAE 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 148 CLILMSMIYSTINLNSFKMVGLMFLISMMT------------------KSAQYPFMSWLPMAMAAPTPISAMVHSStLVT 209
Cdd:PRK08168 165 LLLLAAAALAYLEVGSLSLSALWAHLAAQGaspslqaaalllvlavilKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVN 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 210 AGLFIMFR---LINNFFSKTNLNLItnLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNH 286
Cdd:PRK08168 244 LGGFVLIRfapLLEQAPPARWLLVL--VGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
|
250
....*....|..
gi 302632636 287 AFFKSLIFINMG 298
Cdd:PRK08168 322 SLYKAHAFLSAS 333
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
145-298 |
1.00e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 54.59 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 145 MGDCLILMSMIYSTINLNSFKMVGLmFLISMMTKSAQYPFMSWLPMAM-AAPTPISAMVhSSTLVTAGLFIMFRLINNFF 223
Cdd:PRK12667 204 RGLSFPLTGGLAGNPPLALGVALAL-ALWAFTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIF 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 224 SKTN---------LNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIF--FFLINNMKIIAFI-YMCNHAFFKS 291
Cdd:PRK12667 282 GISPslidfraalSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFmgIGIGTQLGLAAALfHIINHAIAKS 361
|
....*..
gi 302632636 292 LIFINMG 298
Cdd:PRK12667 362 LLFLASG 368
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
83-294 |
3.92e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.62 E-value: 3.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 83 MKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIYstINLN 162
Cdd:PRK06458 107 LRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTIL--VYAN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 163 SFKMVG------------------------LMF---LISMMTKSAQYPFMSWLPMAMA-APTPISAMVhSSTLVTAGLFI 214
Cdd:PRK06458 185 AATVMGdgemailwtellkhaslldptlmkLAFvflLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYA 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 215 MFR----LINNFFSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTlsqisliffflINNMKIIAF---------- 280
Cdd:PRK06458 264 VLRyyilIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS-----------IEHMGLIAFalgiggplgi 332
|
250
....*....|....*...
gi 302632636 281 ----IYMCNHAFFKSLIF 294
Cdd:PRK06458 333 faalLHMLNHSLTKSAIF 350
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-373 |
1.69e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 50.48 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 48 ILVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYY 127
Cdd:PRK08376 85 IWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 128 NN-FESWKSAIKTFINNKMGDCLIL--------------MSMIYSTINLNSF---KMVGLMFLISMMTKSAQYPFMSWLP 189
Cdd:PRK08376 165 NDtWEAIEAGIKYMFVGSLASSMVLlgiallygqygtlnMAYLAVKMSENPTvvaKIALALFIAGLAMKSGAVPVHMWLP 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 190 MAM-AAPTPISAMVHSSTLvtAGLFIMFRLINNFFSKT-NLN----LITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQ 263
Cdd:PRK08376 245 DAYpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAiNLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 264 ISLIFFFL--------INNMKIIAFIYM-------CNHAFFKSLIFINMGLMMMNNFSNQL-KFNMLNKNMCSNFIlSYK 327
Cdd:PRK08376 323 IGYMLLGLgvglaalgDPAMASYGEIALaggiyhiVNHALYKALLFLTAGAVIYETGTRNLnELGGLARTMPKTTI-AFL 401
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 302632636 328 VSCLNLMNMPFFSSFfiKEKMLMKLSSNFFSMMKFTIFMVSSFFTM 373
Cdd:PRK08376 402 IGAAAIVGLPPFNGF--ASKWLIYESSALFNPILGVIAMIGSVLTL 445
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
167-298 |
4.65e-06 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 49.26 E-value: 4.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 167 VGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSStLVTAGLFIMFR---LINNFFSKTNLNLITNlclLSMFISG 243
Cdd:PRK08601 206 INLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRfspLFHDDIAQILLLIFAS---ISVLIGT 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 302632636 244 FKAMSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMCNHAFFKSLIFINMG 298
Cdd:PRK08601 282 GISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
169-295 |
2.01e-05 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 47.00 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 169 LMFLISMMTKSAQYPFMSWLPMAMA-APTPISaMVHSSTLVTAGLFIMFRLINNFF---SKTNLNLITNLCLLSMFISGF 244
Cdd:COG1008 213 LAFFIAFAVKVPMFPFHTWLPDAHVeAPTAGS-VLLAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGAL 291
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 302632636 245 KAMSEKDMKKMIALSTLSQISLIF--FFLINNMKII-AFIYMCNHAFFKSLIFI 295
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLlgIFALNPLGLQgAVLQMVSHGLITAALFL 345
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
49-264 |
2.31e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.03 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 49 LVMDIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKVFFFMTKIF-VISMFLLVFSFNLWTMIMGWEGLGMSSFFLI-FY 126
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 127 YNNFESWKSAIKTFINNKMGDCLIL--MSMIY------------STINLNSFKMVGLMFLISMMT-----KSAQYPFMSW 187
Cdd:COG1007 146 RDDRRSSEAALKYFLLGALSSGFLLygISLLYgatgslnlagiaAALAAGGANSPLLLLGLVLVLaglafKLSAVPFHMW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 188 LPMAM-AAPTPISAMVhsSTLV-TAGLFIMFRLINNFFSKTN---LNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLS 262
Cdd:COG1007 226 TPDVYeGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGLAadwQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
..
gi 302632636 263 QI 264
Cdd:COG1007 304 HA 305
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-380 |
8.12e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.11 E-value: 8.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 152 MSMIYSTINLNSFKMVGLMFL-ISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFsKTNL-- 228
Cdd:PRK12662 195 MFLIIQDLPTNRAIQIGVLFImVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVF-KANFvf 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 229 ------NLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQISLIFFFLINNMKI---IAFIYMCNHAFFKSLIFINMGL 299
Cdd:PRK12662 274 ttlpfnNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGS 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 300 MMMNNFSNQLKFNMLNKNMCSNFILSYKVSCLNLMNMPFFSSFFIKEKMLMK-LSSNFFSMMkfTIFMVSSFFTMNYSLK 378
Cdd:PRK12662 354 ISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAfIKSNAWIGL--VVLLVGSGLSVIYVWK 431
|
..
gi 302632636 379 MM 380
Cdd:PRK12662 432 IV 433
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
87-420 |
2.80e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.12 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 87 FFMTKIFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKM 166
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 167 VGLMFLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINNFFsktnlnLITNLCLLSMFISGFKA 246
Cdd:MTH00197 81 SVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM------GLLICSVLSSLIGGIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 247 MSEKDMKKMIALSTLSQISLIFFFLINNMKIIAFIYMcnhafFKSLIFINMGLMMMNNFSNQLKFNMLNKNMCSNFILSY 326
Cdd:MTH00197 155 MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYL-----IYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 327 KVSCLNLMNMPFFSSFFIKEKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFEKKNYSKSFF 406
Cdd:MTH00197 230 GLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFIL 309
|
330
....*....|....
gi 302632636 407 LMNIFSIFYSKIMV 420
Cdd:MTH00197 310 LMMMLPLLMIFTMI 323
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
81-295 |
4.75e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.88 E-value: 4.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 81 KNMKVFFFMTKIFVISMFLLVF-SFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIY--- 156
Cdd:PRK05846 107 KKRVKFYMAALLWLEGGVIGVFaALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYlvv 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 157 -STINLNSFKMVGLM---------------FLISMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLIN 220
Cdd:PRK05846 187 vYYNATGTFDIADLLnlplppgvqywlflaFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 221 NFF---SKTNLNLITNLCLLSMFISGFKAMSEKDMKKMIALSTLSQIS--LIFFFLINNMKII-AFIYMCNHAFFKSLIF 294
Cdd:PRK05846 267 PLFpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfvTLGIFAGNQLGIQgAIFQMISHGLSSAALF 346
|
.
gi 302632636 295 I 295
Cdd:PRK05846 347 L 347
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
183-298 |
1.44e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.35 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 183 PFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRlinnfFSKTNLN-------LITNLCLLSMFISGFKAMSEKDMKKM 255
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILT-----LSLLGGNaplwwgvALLVLGMITAFVGGLYALMEHNIQRL 272
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 302632636 256 IALSTLSQISLIFFFL--------INNMKIIA------FIYMCNHAFFKSLIFINMG 298
Cdd:PRK08042 273 LAYHTLENIGIILLGLgagvtgiaLEQPALIAlglvggLYHLLNHSLFKSVLFLGAG 329
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
92-415 |
4.73e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 39.10 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 92 IFVISMFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKMVGLMf 171
Cdd:MTH00144 12 LMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSMSLL- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 172 LISMMTKSAQYPFMSWLPMAMAAPTPISAMVhssTLVTAGLFIMFRLINNFFSKTNLNLITNLCLLSMFISGFKAMSEKD 251
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFL---LLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 252 MKKMIALSTLSQISLIFFFLINNMKIIAFIYMCnhaFFKSLIFINMGLMMMNNFSnqlKFNMLNKNMCSNFILSYKVSCL 331
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLI---YIVSSGFLFFSLWSGDSGS---MKDLGSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 332 NLMNMPFFSSFFIKeKMLMKLSSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFEKKNysKSFFLMNIF 411
Cdd:MTH00144 242 SLGGLPPFLGFCSK-LLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLN--SSIISLNLL 318
|
....
gi 302632636 412 SIFY 415
Cdd:MTH00144 319 GGLL 322
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
17-416 |
5.50e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 39.12 E-value: 5.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 17 MSLIIMNNTFLMNFQMLIILNEMFLNLYKNFILvmdIYSSSFFFIVSIVVMNVLSFMNIYMNMNKNMKvffFMTKIFVIS 96
Cdd:MTH00094 1 LSLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLF---FFFDSFVFVLLIFMMVFILGLVLLSEKNFNLL---ILSNLLILI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 97 MFLLVFSFNLWTMIMGWEGLGMSSFFLIFYYNNFESWKSA-----IKTFINNKMGDCLILMSMIYSTINLNSFKMVGLMF 171
Cdd:MTH00094 75 CLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSsyyllFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEMF 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 172 LI---SMMTKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFRLINnFFSKTNLNLITNLCLLSMFISGFKAMS 248
Cdd:MTH00094 155 FIlslSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILG-SLNFVYNNFWIIFSLLGMILSSFCCVF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 249 EKDMKKMIALSTLSQIS---LIFFFLINNMKIIAFIYMCNHAFFKSLIFINMGLMMMNNFSNQLKFnmLNKNMCSNFILS 325
Cdd:MTH00094 234 QSDSKSLAAYSSVTHMSfllLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF--MNSFFSSSMFFG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 326 YKVSCLNLMNMPFFSSF-FIKEKMLMklsSNFFSMMKFTIFMVSSFFTMNYSLKMMLFFNKSNFKIKKNNMFEKKNYSKS 404
Cdd:MTH00094 312 LIFSLVFLSNSGVPPSLsFFSEFLII---SNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLP 388
|
410
....*....|..
gi 302632636 405 FFLMNIFSIFYS 416
Cdd:MTH00094 389 LVFMMFNMFWLS 400
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
99-383 |
8.49e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.61 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 99 LLVFSFNLWTMIMGWEGLGMSSFF-LIFYYNNFESWKSAIKTFINNKMGDCLILMSMIYSTINLNSFKMVG-LMFLISMM 176
Cdd:MTH00011 20 LMALSSNNWLFLWMGMELNLLSFVpLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKNITaLMLLVSLM 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 177 TKSAQYPFMSWLPMAMAAPTPISAMVHSSTLVTAGLFIMFrlinNFFSKTNLNLITNLCLLSMFISGFKAMSEKDMKKMI 256
Cdd:MTH00011 100 LKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF----FFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302632636 257 ALSTLSQISLIFFFLINNMKiIAFIYMCNHAFFKSLIFINMGLMMMNNFsnqlKFNMLNKNMCSNFILSYKVSCLNLMNM 336
Cdd:MTH00011 176 AYSSIGHMGWMTMISVFSPS-MAILYFMTYIIITTPLMLLFAYLNAFST----KFNSKISSMSQTTSMSLFIMLLSLGGL 250
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 302632636 337 PFFSSFFIKEKMLMKLSSNfFSMMKFTIFMVSSFFTMNYSLKMMLFF 383
Cdd:MTH00011 251 PPFTGFMPKLMAIETLTSN-SMILILLVLIVGSLMNLFYYLNLIFNF 296
|
|
| |
