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Conserved domains on  [gi|301353288|ref|YP_003795361|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Anilius scytale]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 2-322 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 557.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   2 IHILTTHILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSP 81
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  82 IAALTLPLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTAT 161
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 162 ITGGYSLLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMN 241
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 242 TLTVMMFMNPGPQTH-PELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTP 320
Cdd:MTH00111 241 TLTTILFLNPSTLNLpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ..
gi 301353288 321 PQ 322
Cdd:MTH00111 321 PQ 322
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 2-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 557.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   2 IHILTTHILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSP 81
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  82 IAALTLPLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTAT 161
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 162 ITGGYSLLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMN 241
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 242 TLTVMMFMNPGPQTH-PELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTP 320
Cdd:MTH00111 241 TLTTILFLNPSTLNLpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ..
gi 301353288 321 PQ 322
Cdd:MTH00111 321 PQ 322
NADHdh pfam00146
NADH dehydrogenase;
13-308 1.22e-115

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 335.98  E-value: 1.22e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   13 MLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   93 APLPM--PFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLA 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  171 FTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMN 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 301353288  251 PGPQTHPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLL 308
Cdd:pfam00146 243 GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-308 9.75e-105

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 309.37  E-value: 9.75e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  16 ILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITWAPL 95
Cdd:COG1005   19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  96 PM--PFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLAFTS 173
Cdd:COG1005   99 PFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 174 TQ-NSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMNP- 251
Cdd:COG1005  179 AQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGw 258

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301353288 252 -GPQTHPELFTIN----LMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLL 308
Cdd:COG1005  259 lGPFPILPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 2-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 557.97  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   2 IHILTTHILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSP 81
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  82 IAALTLPLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTAT 161
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 162 ITGGYSLLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMN 241
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 242 TLTVMMFMNPGPQTH-PELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTP 320
Cdd:MTH00111 241 TLTTILFLNPSTLNLpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ..
gi 301353288 321 PQ 322
Cdd:MTH00111 321 PQ 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-322 2.75e-173

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 482.95  E-value: 2.75e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   1 MIHILTTHILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLS 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  81 PIAALTLPLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTA 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 161 TITGGYSLLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 241 NTLTVMMFMNPGPQTH-PELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGT 319
Cdd:MTH00134 241 NTLSAILFLGASHIPTlPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320


                 ...
gi 301353288 320 PPQ 322
Cdd:MTH00134 321 PPQ 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 2-322 3.19e-170

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 475.26  E-value: 3.19e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   2 IHILTTHILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSP 81
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  82 IAALTLPLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTAT 161
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 162 ITGGYSLLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMN 241
Cdd:MTH00071 161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 242 TLTVMMFMNPGPQ-THPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTP 320
Cdd:MTH00071 241 TLSTILFLGSTYNhLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320


                 ..
gi 301353288 321 PQ 322
Cdd:MTH00071 321 PM 322
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-322 1.33e-161

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 453.31  E-value: 1.33e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   8 HILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTL 87
Cdd:MTH00104   2 FMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  88 PLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYS 167
Cdd:MTH00104  82 ALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFT 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 168 LLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMM 247
Cdd:MTH00104 162 LSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTIL 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 301353288 248 FMNPGPQTH-PELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTPPQ 322
Cdd:MTH00104 242 FLGAFHNPYmPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQ 317
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 8-321 8.19e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 405.45  E-value: 8.19e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   8 HILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTL 87
Cdd:MTH00218   4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  88 PLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYS 167
Cdd:MTH00218  84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 168 LLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMM 247
Cdd:MTH00218 164 LEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVIL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 301353288 248 FMNPGpqthpeLFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTPP 321
Cdd:MTH00218 244 FLGTS------LTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 9-321 9.91e-143

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 405.51  E-value: 9.91e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   9 ILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLP 88
Cdd:MTH00040   7 LINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  89 LITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSL 168
Cdd:MTH00040  87 LLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 169 LAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMF 248
Cdd:MTH00040 167 SSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILF 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 301353288 249 MNpGPQTHPELFTINLM---IKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTPP 321
Cdd:MTH00040 247 LG-GGSPFNEIFPINIIivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 8-310 6.47e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 341.85  E-value: 6.47e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   8 HILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTL 87
Cdd:MTH00143   3 SLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLIL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  88 PLITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYS 167
Cdd:MTH00143  83 ALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 168 LLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMM 247
Cdd:MTH00143 163 FIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVL 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 301353288 248 FMNpGPQTHPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNV 310
Cdd:MTH00143 243 FFG-GSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFV 304
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 9-311 2.04e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 340.59  E-value: 2.04e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   9 ILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLP 88
Cdd:MTH00193   5 LINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  89 LITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSL 168
Cdd:MTH00193  85 LLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 169 LAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMF 248
Cdd:MTH00193 165 LDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 301353288 249 MNpgpqthPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVS 311
Cdd:MTH00193 245 LG------GDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFG 301
NADHdh pfam00146
NADH dehydrogenase;
13-308 1.22e-115

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 335.98  E-value: 1.22e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   13 MLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   93 APLPM--PFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLA 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  171 FTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMN 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 301353288  251 PGPQTHPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLL 308
Cdd:pfam00146 243 GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 13-318 5.72e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 327.08  E-value: 5.72e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  13 MLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITW 92
Cdd:MTH00195   9 LIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILW 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  93 APLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLAFT 172
Cdd:MTH00195  89 VPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMV 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 173 STQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMNPG 252
Cdd:MTH00195 169 ISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 301353288 253 PqthpelfTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNG 318
Cdd:MTH00195 249 G-------TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 9-314 1.30e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 318.52  E-value: 1.30e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   9 ILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLP 88
Cdd:MTH00225   4 LLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  89 LITWAPLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSL 168
Cdd:MTH00225  84 LILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 169 LAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMF 248
Cdd:MTH00225 164 FDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 301353288 249 MNPGPQTHPelftINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTM 314
Cdd:MTH00225 244 FGGFFVTID----LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-321 3.27e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 312.82  E-value: 3.27e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  16 ILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITWAPL 95
Cdd:MTH00054  12 LVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  96 PM--PFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLAFTS 173
Cdd:MTH00054  92 PYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVL 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 174 TQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMF----M 249
Cdd:MTH00054 172 AQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFlggwL 251

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301353288 250 NPGPQTHPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMALNGTPP 321
Cdd:MTH00054 252 VISGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-321 8.95e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 309.36  E-value: 8.95e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   1 MIHILTTHILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  81 PIAALTLPLITWAPLPMP--FPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 159 TATITGGYSLLAFTSTQNS-MWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 238 LLMNTLTVMMFMNPGPQTHPELFTINLM--IKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMA 315
Cdd:MTH00216 241 ILMSCLTTILFLGGWLSPIKYFKGGAGWfgLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFG 320


                 ....*.
gi 301353288 316 LNGTPP 321
Cdd:MTH00216 321 FNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-308 9.75e-105

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 309.37  E-value: 9.75e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  16 ILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITWAPL 95
Cdd:COG1005   19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  96 PM--PFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLAFTS 173
Cdd:COG1005   99 PFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 174 TQ-NSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMNP- 251
Cdd:COG1005  179 AQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGw 258

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301353288 252 -GPQTHPELFTIN----LMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLL 308
Cdd:COG1005  259 lGPFPILPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
9-308 5.17e-98

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 292.10  E-value: 5.17e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   9 ILNPMLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLP 88
Cdd:PRK06076  13 LLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  89 LITWAPLPM--PFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGY 166
Cdd:PRK06076  93 FLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 167 SLLAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVM 246
Cdd:PRK06076 173 NLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITT 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 301353288 247 MFMN----PGPQTHPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLL 308
Cdd:PRK06076 253 LFLGgwlpPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 13-321 3.90e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 278.05  E-value: 3.90e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  13 MLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITW 92
Cdd:MTH00029  14 LIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAW 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  93 APLPMP--FPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLA 170
Cdd:MTH00029  94 AIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISE 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 171 FTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMN 250
Cdd:MTH00029 174 IVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLG 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 251 ------PGPQTHPELFTIN-----------LMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTT 313
Cdd:MTH00029 254 gwlsplDGIPTPPEAFSIFeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGIL 333


                 ....*...
gi 301353288 314 MALNGTPP 321
Cdd:MTH00029 334 IGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 13-316 2.85e-86

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 261.64  E-value: 2.85e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  13 MLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITW 92
Cdd:MTH00010  10 LLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLW 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  93 APLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLAFT 172
Cdd:MTH00010  90 SLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKII 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 173 STQNSmWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMNpg 252
Cdd:MTH00010 170 MSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTS-- 246

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 301353288 253 pqTHPELFTINLMI--KTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLLNVSTTMAL 316
Cdd:MTH00010 247 --FIPSIFISDLMLilKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 13-305 5.88e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 211.30  E-value: 5.88e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  13 MLYILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITW 92
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  93 APLPMPFPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMStatITGGYSLLAFT 172
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLS---IMLHNNSFSFV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 173 StQNSMWLLLPTWPLAMMwftsTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMNpg 252
Cdd:MTH00090 160 S-SFSLSLFVIYLPFLIM----IIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 301353288 253 pqthpelftiNLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAM 305
Cdd:MTH00090 233 ----------FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIF 275
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 19-303 4.96e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 173.19  E-value: 4.96e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  19 ILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTLPLITWAPLPMP 98
Cdd:MTH00058  14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSY 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  99 FPLTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATITGGYSLLAFTSTQNSM 178
Cdd:MTH00058  94 YSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLS 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 179 WLLLPtwPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNILLMNTLTVMMFMNPGpqthpe 258
Cdd:MTH00058 174 VLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG------ 245

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 301353288 259 lfTINLMIKTTLLtmTFLWVRASYPRFRYDQLMHLLWKQYLPLTL 303
Cdd:MTH00058 246 --FVSIMLLFHLL--FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 9-316 1.04e-45

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 158.58  E-value: 1.04e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288   9 ILNPML-YILPILIAVAFLTLLERKLLGHMQLRKGPNLVGPLGLLQPIADGIKLIMKEQNKPTMSSPILFMLSPIAALTL 87
Cdd:CHL00032  29 ILVPILtLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVIS 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  88 PLITWapLPMPFP----LTNMNLGLLFIMAMSSMFTHTILWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTATIT 163
Cdd:CHL00032 109 ILLSY--LVIPFGyhlvLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLS 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 164 GGYSLLAFTSTQNSMWLLlpTWPL------AMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNI 237
Cdd:CHL00032 187 NSLSTVDIVEAQSKYGFW--GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL 264

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 238 LLMNTLTVMMFMN----PGP-QTHPELFTINLM---------IKTTLL-TMTFLWV----RASYPRFRYDQLMHLLWKQY 298
Cdd:CHL00032 265 LVSSLFVTVLYLGgwnlSIPyIFIPELFEINKTggvfgttigIFITLAkTYLFLFIsittRWTLPRLRMDQLLNLGWKFL 344

                        330
                 ....*....|....*...
gi 301353288 299 LPLTLAMCLLNVSTTMAL 316
Cdd:CHL00032 345 LPISLGNLLLTTSFQLLS 362
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
10-308 2.73e-28

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 111.04  E-value: 2.73e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  10 LNPMLYILPILIAVAFLTLL----ERKLLGHMQLRKGPnlvgplGLLQPIADGIKLIMKEQNKPTMSSPIlFMLSPIAAL 85
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLllgiIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288  86 TLPLITWAPLPMPFPLTNMN-----LGLLFIMAMSSMFTHtilWSGWSSNSKYPLMGAMRAVAQTISYEVTLGMIIMSTA 160
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSfsgdlIVLVYLLALARFFLA---LAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALA 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301353288 161 TITGGYSL---LAFTSTQNSMWLLLPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEFSAGPFALLFLAEYTNI 237
Cdd:COG0650  151 LLAGSTSLsdiVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKL 230

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 301353288 238 LLMNTLTVMMFMNPGPQTHPELFTINLMIKTTLLTMTFLWVRASYPRFRYDQLMHLLWKQYLPLTLAMCLL 308
Cdd:COG0650  231 FVLLSLFVNLFLPWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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