|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 651.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGwLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 321 GLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLA 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 30065686 401 ALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREHLLISLHLIPILLLILKPELVWGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 650.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 321 GLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLA 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 30065686 401 ALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREHLLISLHLIPILLLILKPELVWGWY 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 646.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEpGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSE-TMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 321 GLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLA 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 30065686 401 ALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREHLLISLHLIPILLLILKPELVWGWY 459
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 626.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGwLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNS-LNFSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 321 GLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLA 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|....*
gi 30065686 401 ALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREH 435
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTREN 434
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 533.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 3 KILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 83 NHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 163 IALLILQKDVGTLSMLLIQYSPPTllpSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 243 GMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 323 VSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAAL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 30065686 403 ITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREHLLISLHLIPILLLILKPELV 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-435 |
2.05e-163 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 469.07 E-value: 2.05e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMV-ILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIA 319
Cdd:MTH00044 241 GYGLIRLInLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 320 HGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....*.
gi 30065686 400 AALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREH 435
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREH 436
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-434 |
8.88e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 362.16 E-value: 8.88e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLwttttAQSLMIASLSLTWLKRSAEPGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPepINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSpptllpSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 321 GLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLA 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|....
gi 30065686 401 ALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSRE 434
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-459 |
8.65e-119 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 353.76 E-value: 8.65e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 49 GWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQNHISPepINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 129 PTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLPSWtnkIWWAACLLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 209 PLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 289 YSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 369 ALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREHLLISLHLIPILLL 448
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLL 406
|
410
....*....|.
gi 30065686 449 ILKPELVWGWY 459
Cdd:MTH00150 407 ILKSDLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
4.87e-112 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 337.87 E-value: 4.87e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSpKWLWTTTTAQSLMIASLSLTWLKRSAEPGWLtLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSM-FTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 81 SQNHISPEpiNRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGTLSMLLIQYSPPTLLPSwtnKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 241 GYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 321 GLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLA 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 30065686 401 ALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSREHLLISLHLIPILLLILKPELVWGW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-434 |
1.17e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 316.15 E-value: 1.17e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 28 TAQSLMIASLSLTWLKRSAEPGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQNHISPEpiNRQRMYISLLISLQVFL 107
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 108 IMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLliqYSPPTL 187
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 188 LPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILAL 267
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 268 WGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITR 347
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 348 GMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMFMTTQWGPVPPSMNNI 427
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
....*..
gi 30065686 428 EPPHSRE 434
Cdd:MTH00205 419 LAISERE 425
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-434 |
9.48e-86 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 271.18 E-value: 9.48e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 9 LMLLPTTWLSSPKWLWTTTTAQSLmIASLSLTWLKRSAEPGW-----------LTLNSYLAIDPLSTPLLVLTCWLLPLM 77
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTL-LLSLYLLAGFDPGTGGFqfvesypwipsLGISYHLGVDGISLPLVLLTALLTPLA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 78 IMASQNHIspepINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNqAERLNAGTYFLFYTLVG 157
Cdd:COG1008 99 ILASWNEI----KKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 158 SLPLLiallilqkdVGTLSMLLIQYSPPTLLPSWTN--------KIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGS 229
Cdd:COG1008 174 SLLML---------VAILALYFLAGALTFDIAELAAaplpltaqLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 230 MVLAAVLLKLGGYGMMRMVILLDPL-TKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPW 308
Cdd:COG1008 245 VLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 309 GFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFY 388
Cdd:COG1008 325 GLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQ 404
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 30065686 389 WSEWTLILTGLAALITIIYTMYMFMTTQWGPVPPSMNNIEPPHSRE 434
Cdd:COG1008 405 VNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
22-434 |
2.42e-77 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 249.35 E-value: 2.42e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 22 WLWTTT-TAQSLMIASLSLTWLKRsaepgwLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQNHISpepiNRQRMYISLL 100
Cdd:PRK05846 48 VLWIGFdSSNAGFQFVEKHPWIPR------FGISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAAL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 101 ISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGnQAERLNAGTYFLFYTLVGSLPL----LIALLILQKDVGTLS 176
Cdd:PRK05846 118 LWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 177 MLLIQYSPptlLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPL-T 255
Cdd:PRK05846 197 IADLLNLP---LPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaS 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 256 KELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVY 335
Cdd:PRK05846 274 HEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLY 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 336 ERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMFMTT 415
Cdd:PRK05846 354 DRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRV 433
|
410
....*....|....*....
gi 30065686 416 QWGPVPPSMNNIEPPHSRE 434
Cdd:PRK05846 434 MFGPVKNEVAKLKDLNGRE 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
23-429 |
3.42e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 241.00 E-value: 3.42e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 23 LWTTTTAQSLMIASLSLTWLKRsaepgwLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQNHISpepiNRQRMYISLLIS 102
Cdd:TIGR01972 45 LFQFDPTGSGFQFTEDIPWIPA------LGISYHLGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 103 LQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQaERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQY 182
Cdd:TIGR01972 115 LEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 183 SPPtlLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDP-LTKELAYP 261
Cdd:TIGR01972 194 NLP--LPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPV 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 262 FIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTR 341
Cdd:TIGR01972 272 LAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTR 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 342 TLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMFMTTQWGPVP 421
Cdd:TIGR01972 352 DIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELS 431
|
....*...
gi 30065686 422 PSMNNIEP 429
Cdd:TIGR01972 432 NPEVAEFP 439
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-412 |
3.56e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 230.34 E-value: 3.56e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 56 YLAIDPLSTPLLVLTCWLLPLMIMASQNHISpepiNRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIIT 135
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 136 RWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGT---LSMLLIQyspptlLPSWTNKIWWAACLLAFLVKMPLYG 212
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyQILLNIK------LPLSIQKWLLVGFFLSLAVKIPQIP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 213 IHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMTGS--TClRQTDLKALIAYS 290
Cdd:MTH00204 228 FHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSltTC-RQVDFKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 291 SVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLAL 370
Cdd:MTH00204 307 SVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 30065686 371 PPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMF 412
Cdd:MTH00204 387 PLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
23-412 |
7.17e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 219.15 E-value: 7.17e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 23 LWTTTTAQSLMIASLSLTWLKrSAEPGWLTLNsyLAIDPLSTPLLVLTCWLLPLMIMASQNHISpepiNRQRMYISLLIS 102
Cdd:MTH00217 45 LWASFDGEGQFQAIKKFEWIP-GIEPVFGPVV--FAVDGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLV 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 103 LQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMlliQY 182
Cdd:MTH00217 118 IEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 183 SPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPF 262
Cdd:MTH00217 195 LCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 263 IILALWGAIMTGS--TClRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNT 340
Cdd:MTH00217 275 IQTLSLLAIIYGSltTC-RQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHT 353
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30065686 341 RTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMF 412
Cdd:MTH00217 354 RLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-399 |
1.39e-64 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 209.86 E-value: 1.39e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 113 ATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLPSWT 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 193 NKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 273 TGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLA-NTVYERTNTRTLLITRGMQT 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 30065686 352 LLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGL 399
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
3.96e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 202.07 E-value: 3.96e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTCWLLPLMIMASQNHISpepiNRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITR 136
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 137 WGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQySPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLW 216
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLA-SCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMTGS--TClRQTDLKALIAYSSVSH 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSfaTC-RQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 295 MGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFP 374
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350
....*....|....*....|....*....|....*.
gi 30065686 375 NLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMY 410
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-411 |
1.02e-49 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 176.76 E-value: 1.02e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 53 LNSYLAIDPLSTPLLVLTCWLLPLMIMASQNhispepINRQ-RMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTL 131
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWK------VTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVY 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 132 AIITRWGNQaERLNAGTYFLFYTLVGSLPLLI--ALLILQKDVGTLSML-LIQYSPPTLLPSWTnkiwWAACLLAFLVKM 208
Cdd:PRK12561 125 LLISIWGGQ-KRLYAATKFILYTALASIFILVagLALALSGDTFTFDLAeLGAKSYPLALELLL----YAGFLIAFGVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 209 PLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRM-VILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALI 287
Cdd:PRK12561 200 PIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 288 AYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLAN 367
Cdd:PRK12561 280 AYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMAS 359
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 30065686 368 LALPPFPNLTGEMA----IMASLFYWSEWTLILTGLAALITIIYTMYM 411
Cdd:PRK12561 360 LALPGMSGFVSELTvflgITSSDVYSSTFRTITILLAAVGLILTPIYL 407
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
21-416 |
1.09e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 174.95 E-value: 1.09e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 21 KWLWTTTTAQSLMIASLSLTWLKRSAEPGWLTLNSY-------LAIDPLSTPLLVLTCWLLPLMIMASQNHISPEPinRQ 93
Cdd:COG0651 29 QRALSLLASLALLALALALLLQVLAGGPLVYALGGWpapfgivLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 94 RMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITrWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVG 173
Cdd:COG0651 107 RRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 174 TLSMLLIQYSPPTLLPSWTNKIWwAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDP 253
Cdd:COG0651 186 TLNMADLAARLAELDPGLLLAAF-ALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 254 LTKELAYPFIIL------ALWGAIMTgstcLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSAL 327
Cdd:COG0651 265 ADPALFLGTLLLvlglltMLVGALGA----LAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 328 FCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAA-LITII 406
Cdd:COG0651 341 FLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSsLLTLA 420
|
410
....*....|
gi 30065686 407 YTMYMFMTTQ 416
Cdd:COG0651 421 YFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-413 |
5.13e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 158.92 E-value: 5.13e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 99 LLISLQVFLIMAFGATE-IILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIallilqkdVGTLSM 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF--------VYLKNF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 178 LLIQYSPPTLLPSWTNKIwwaACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLtke 257
Cdd:MTH00094 138 FFFSLCYFDFFLSWEMFF---ILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 258 LAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30065686 338 TNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMFM 413
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
51-429 |
1.02e-41 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 154.86 E-value: 1.02e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 51 LTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQnhispEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPT 130
Cdd:PRK06473 69 LGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 131 LAIITRWGNQaERLNAGTYFLFYTLVGSLPLLiallilqkdVGTLSMLLIQYSP--------PTLLPSWTNKIWWAACLL 202
Cdd:PRK06473 144 YLLIAIWGGQ-RRGYAATKFLLYTAISGILIL---------VSFLGLVWLSGASsfdyeplrSHTLPLSTQLLLLAPILV 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 203 AFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFiiLALWGAI--MTGSTC-LR 279
Cdd:PRK06473 214 GFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 280 QTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGM---QTLLPLT 356
Cdd:PRK06473 292 QKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPIT 371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 30065686 357 ATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITIIYTMYMFMTTQWGPVPPSMNNIEP 429
Cdd:PRK06473 372 GSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
1.92e-41 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 153.95 E-value: 1.92e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTCWLLPLMIMASQnhispePINRQ-RMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 136 RWGNQaERLNAGTYFLFYTLVGSLPLLiallilqkdVGTLSMLLIQYSPPTL-LPSWTNK--------IWWAACLLAFLV 206
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLL---------IGVLGMGLYGSNEPTLnFETLANQsypvaleiLFYIGFLIAYAV 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 207 KMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILAlwGAIM---TGSTCLRQTDL 283
Cdd:CHL00011 224 KLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIV--GAIQiiyAASTSLGQRNL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 284 KALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIA 363
Cdd:CHL00011 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSF 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 30065686 364 SLANLALPPFPNLTGEM----AIMASLFYWSEWTLILTGLAA---LITIIYTMYM 411
Cdd:CHL00011 382 SMASLALPGMSGFVAELivffGIITSQKYLLMPKILITFVMAigmILTPIYLLSM 436
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
51-419 |
4.41e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 147.93 E-value: 4.41e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 51 LTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQnhispePIN-RQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIP 129
Cdd:PRK02546 77 LGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIP 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 130 TLAIITRWGNQaERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNkIWWAACLLAFLVKMP 209
Cdd:PRK02546 151 VYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 210 LYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRM-VILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIA 288
Cdd:PRK02546 229 IVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 289 YSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANL 368
Cdd:PRK02546 309 YSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 30065686 369 ALPPFPNLTGEMAIMASL----FYWSEWTLILTGLAA---LITIIYTMYMFMTTQWGP 419
Cdd:PRK02546 389 ALPGMSGFVAELMVFVGFatsdAYTLPFRVVVVFLAAvgvILTPIYLLSMLREIFFGP 446
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
2.60e-35 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 126.87 E-value: 2.60e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 1 MLKILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGWLTLNSYLAIDPLSTPLLVLTCWLLPLMIMA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 30065686 81 SQNHISPEPINRQRMYISLLISLQVFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-421 |
2.68e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 128.94 E-value: 2.68e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 4 ILIPTLMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEP------GWLT-LNSYLAIDPLSTPLLVLTCWLLPL 76
Cdd:PRK12667 18 FLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPivylfgGWPApIGIVYEVDLLGALLGLLTALVMFL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 77 MIMASQNHISPEPINRqrMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLV 156
Cdd:PRK12667 98 ILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 157 GSLPLLIALLILQKDVGTLSM----------LLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPI 226
Cdd:PRK12667 176 GTTLYFLALAFLYATFGTLNMadlsakirglSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPS 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 227 AGSMVLAAVLLKLGGYGMMRMV-------ILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVV 299
Cdd:PRK12667 256 PVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIF 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 300 GGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGE 379
Cdd:PRK12667 336 MGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK 415
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 30065686 380 MAIMASLFYWSEWTLILTGL-AALITIIYTMYMFMTTQWGPVP 421
Cdd:PRK12667 416 LLLFNALLESGFYLPALVLLiASAISLVGYFRAWYSLFFGKPK 458
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
11-371 |
1.23e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 126.75 E-value: 1.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 11 LLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGW-----------LTLNSYLAIDPLSTPLLVLTCWLLPLMIM 79
Cdd:PRK07363 18 FFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMqfqeylpwnepLGLSYSLGVDGLSLPLLVLNSLLTWIAIY 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 80 ASQnhispEPINRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQaERLNAGTYFLFYTLVGSL 159
Cdd:PRK07363 98 SIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 160 PLLIALLILQKDVGTLSMLLIQYSPPTLlPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKL 239
Cdd:PRK07363 172 LVLAAFLGIVWLSGSTSFDYDAISTQNL-SLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 240 GGYGMMRMVILLDPLTKELAYPfiILALWGAI--MTGS-TCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIIL 316
Cdd:PRK07363 251 GTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQ 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 30065686 317 MIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTL---LPLTATWWFIASLANLALP 371
Cdd:PRK07363 329 MISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIP 386
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-425 |
3.11e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 113.82 E-value: 3.11e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTcwLLPLMIMASQNHISPEPinRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITR 136
Cdd:PRK08375 73 LRADSLSALFLLVT--SILAIAALLYAIGYGEH--RQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 137 WGNqAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPtllPSWTNKIWWAACLLAFLVKMPLYGIHLW 216
Cdd:PRK08375 149 GGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA---ENPTVVTAFGFVLLALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMT---GST-CLRQTDLKALIAYSSV 292
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSmlvGSLaALGQDDVKRVLAYSTV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 293 SHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPP 372
Cdd:PRK08375 305 SQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 30065686 373 FPNLTGEMAIMASLFYWSEWTLILTGLAA-LITIIYTMYMFMTTQWGPVPPSMN 425
Cdd:PRK08375 385 TSGFVSKWYLVVGAVEAGQWLVLAVLLASsLLALLYFLRIWYRAFFGPPPPGSE 438
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-407 |
2.99e-24 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 105.01 E-value: 2.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLD-PLTKELAYP-FIILALWGAIMTGSTCL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRlLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 279 RQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTAT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 30065686 359 WWFIASLANLALPPFPNLTGE----MAIMASLFYWSEWTLILTGLAALITIIY 407
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEflilTAGLARGPLLIAILLLLLLTLAFAALVR 433
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-433 |
1.22e-19 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 91.16 E-value: 1.22e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 92 RQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITrWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKD 171
Cdd:PRK12663 106 RRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 172 VGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFLVKMPLYGIHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILL 251
Cdd:PRK12663 185 FGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 252 DPLTKELAYPFIILALWGAIMTGST-CLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCL 330
Cdd:PRK12663 264 FPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 331 ANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIM-ASLFYWSEWTLILTGLAALITIIYTM 409
Cdd:PRK12663 344 AGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVqGALDNGAYILLALMLITSLITMYSLF 423
|
330 340
....*....|....*....|....
gi 30065686 410 YMFMTTQWGPVPPSMNNIEPPHSR 433
Cdd:PRK12663 424 RIFFLAYWGDKDGEEVNFKPIPLY 447
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-407 |
1.62e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 90.78 E-value: 1.62e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTCWLLPLMIMASQNHispepiNRQRMYISLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIITr 136
Cdd:PRK07234 63 LRADALSGYFILTNALVTLAVIFYCWES------AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 137 WGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLpswtnkiwwAACLLAFLVKMPLYGIHLW 216
Cdd:PRK07234 136 YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAF---------ALIALGLLVKGGIFVSGLW 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 217 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMTgstcLRQTDLKALIAYSSVSHMG 296
Cdd:PRK07234 207 LPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLGVLFA----LLEKDLKRMLAFSTISQLG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 297 LVVGGILIqtpwgftgAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTatwwfiasLANLALPPFPNL 376
Cdd:PRK07234 283 FILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLT--------MASFSIAGFPLL 346
|
330 340 350
....*....|....*....|....*....|.
gi 30065686 377 TGEMAIMASLFYWSEWTLILTGLAALITIIY 407
Cdd:PRK07234 347 AGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-409 |
3.73e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 90.03 E-value: 3.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 109 MAFGATEIILFYVMFEATLIPTLAIITRwGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLl 188
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDEL- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 189 PSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPlTKELAYPFIILALW 268
Cdd:PRK12665 204 PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 269 GAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRG 348
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30065686 349 MQTLLPLTATWWFIASLaNLA-LPPFPNLTGEMAIM---ASLFYWSEWTLILTGLAALITIIYTM 409
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLeagAEDGTWLAWALVAGGVVTSLLTLYAV 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
2.31e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 87.86 E-value: 2.31e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 50 WLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQNHISPEPINRQRMYISLLISLQVF-LIMAFGATEIILFYVMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 129 PTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLlpswtnKIWWAACLLAFLVKM 208
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL------SLVFLLLFLGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 209 PLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRmvILLDPLTKELAYPFIIL------ALWGAIMTgstcLRQTD 282
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILlagsisALLGVIYA----LKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 283 LKALIAYSSVSHMGLVVGGILIQTPWGFTG-----------AIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQT 351
Cdd:PRK08667 294 LKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 30065686 352 LLPLTATWWFIASLANLALPPFPNLTGEMAIMASLF 387
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-415 |
6.68e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 86.51 E-value: 6.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMvillDPLTKELAYPFIILALWGA---IMTGSTCLRQTDLKALIAY 289
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 290 SSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLA 369
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 30065686 370 LPPFPNLTGEMAIMASLFYWSEWTLILTGLAalitIIYTMYMFMTT 415
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAA----VLGNALMVAVA 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-413 |
4.88e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 83.22 E-value: 4.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 99 LLISLQVFLIMAFGatEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSML 178
Cdd:PRK08376 128 LLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMA 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 179 LIQYSPpTLLPSWTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRMVILLDPLT-- 255
Cdd:PRK08376 206 YLAVKM-SENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAin 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 256 -KELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMG---------LVVGGILIQTPWGFT---GAIILMIAHGL 322
Cdd:PRK08376 283 lATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHAL 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 323 VSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEwtliLTGLAAL 402
Cdd:PRK08376 363 YKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNP----ILGVIAM 438
|
330
....*....|.
gi 30065686 403 ITIIYTMYMFM 413
Cdd:PRK08376 439 IGSVLTLASFV 449
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-407 |
1.05e-16 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 82.12 E-value: 1.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 76 LMIMASQNHISPEPINRQRMyisllislqVFLIMAFGATEIIL------FYVMFEATLIPTLAIiTRWGNQAERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDKYAM---------LFLLLMLGATGMIAtgdifnLFVFMEITAITAYAL-TAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 150 FLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLPSwTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGS 229
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPT-VAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPIT 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 230 MVLAAVLLKLGGYGMMRMVILLDPLT--KELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTP 307
Cdd:PRK08377 242 VMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 308 WGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAI-MASL 386
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIiLAGL 401
|
330 340
....*....|....*....|.
gi 30065686 387 FYWSEWTLILTGLAALITIIY 407
Cdd:PRK08377 402 SAGYTWPVALVLGASVVEAVY 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-396 |
2.08e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 81.34 E-value: 2.08e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALwGAIMTGSTC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 278 LRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTA 357
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190
....*....|....*....|....*....|....*....
gi 30065686 358 TWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTLIL 396
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLA 410
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-372 |
5.66e-16 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 80.86 E-value: 5.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 113 ATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTyfLFYTLVGSLPLLIALLILQKDVGTLSMLLIQYSPptllpSWT 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHSD-----VWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 193 NKIWWAAcLLAFLVKMPLYG------IHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILL--DPLTKELaypFII 264
Cdd:PRK12650 202 EKPGLTT-VVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVWNWL---LII 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 265 LALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLL 344
Cdd:PRK12650 278 VGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIR 357
|
250 260
....*....|....*....|....*...
gi 30065686 345 ITRGMQTLLPLTATWWFIASLANLALPP 372
Cdd:PRK12650 358 RLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
201-372 |
9.25e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 9.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAF-LVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMrMVILLDPLTK------------ELAYPFIILAL 267
Cdd:PRK08668 202 LLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPGTKlfsefgtyrgvpLFNYILAWLGN 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 268 WGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITR 347
Cdd:PRK08668 281 ISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMG 360
|
170 180
....*....|....*....|....*
gi 30065686 348 GMQTLLPLTATWWFIASLANLALPP 372
Cdd:PRK08668 361 GLIEKMPFTFAMYLVAIISLAGIPP 385
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-418 |
1.20e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 78.84 E-value: 1.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTCWLLPLMIMASQNHISPEpinRQRMYI-SLLISLQVFLIMAFGATEIILFYVMFEATLIPTLAIIT 135
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYyPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 136 RWGNQAERLNAGTYFLFyTLVGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLL--AFLVKMPLYGI 213
Cdd:PRK07691 150 IGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFlfVFATKAGLFPL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 214 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKELAYPFI-ILALWGAIMTGSTCLRQTDLKALIAYSSV 292
Cdd:PRK07691 229 YFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 293 SHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPP 372
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 30065686 373 FPNLTGEMAIMASLFYWSE-WTLILTGLAALITIIYTMYMFMTTQWG 418
Cdd:PRK07691 389 LSGFYGKFFIVEGTFEAGFyVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
172-431 |
1.25e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 75.96 E-value: 1.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 172 VGTLSMLLIQYSPPTLLPSWTnkIWWAACLLAF--LVK---MPLygiHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMM 245
Cdd:COG1009 189 AGTLNFSELLAAAPTILSSPL--LTLILLLLLLgaFGKsaqFPL---HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLA 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 246 RMVILLDpLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQtpwGFTGAIILMIAHGLVSS 325
Cdd:COG1009 263 RLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKA 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 326 ALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPN-LTGEMAIMASL--FYWSEWTLILTGLAAL 402
Cdd:COG1009 339 LLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGfFSKEAILEAALeaGGLGPLLLAVALLGAF 418
|
250 260
....*....|....*....|....*....
gi 30065686 403 ITIIYTMYMFMTTQWGpvPPSMNNIEPPH 431
Cdd:COG1009 419 LTAFYSFRLFFLVFFG--KPRPKTPKHPH 445
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
84-419 |
2.64e-14 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 75.18 E-value: 2.64e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 84 HISPEPINRQRMYISLLIslqvFLIMAFG---ATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLP 160
Cdd:PRK12646 101 YLSSRKDNLPRFYFYLTL----FMFSMIGivlSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 161 LLIALLILQKDVGT--LSMLLIQYSpptllpSWTNKIWWAACLLAFLV----KMPLYGIHLWLPKAhVEAPIAGSMVL-A 233
Cdd:PRK12646 177 LLVGFIMLYIMTGTnnITEILGQAD------HIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhS 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 234 AVLLKLGGYGMMRMVILLDpLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVV-----GGILIQTPW 308
Cdd:PRK12646 250 ATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQ 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 309 G---------FTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLAnLALPPFPN--LT 377
Cdd:PRK12646 329 DaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLS 407
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 30065686 378 GEMAI--MASLFYWSEWTLILTGL-------AALITIIYTMYMFMTTQWGP 419
Cdd:PRK12646 408 KEMFLdaLTQTGQLSQFSLISMIIivfigviASIFTFTYALYMVKEVFWGK 458
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
57-430 |
1.56e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 72.31 E-value: 1.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTCWLLPLMIMASQNHISP--------EPINRQRMYISLLISLQVFLIMAfgaTEIILFYVMFEATLI 128
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPgnrehpvhEGTGRYYAFLLLFIGAMAGLVYS---STLLGLLLFFEITGL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 129 PTLAIITRWGNQAERLNAGTYFLFyTLVGSLPLLIALLILQKDVGTLSMLLIQyspptLLPSWTNKIWWAACLLAFLVKM 208
Cdd:PRK06525 148 CSWALISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 209 PLYGIHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMTGSTCLRQTDLKALI 287
Cdd:PRK06525 222 AQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 288 AYSSVSHMGLVVGGILIQ---TPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIAS 364
Cdd:PRK06525 301 AYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAA 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30065686 365 LANLALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALITI------IYTMYMFMTTQWGPVPPSMNNIEPP 430
Cdd:PRK06525 381 LAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIesvasfAWFLRWFGRVVFGEPSEAVADAAPL 452
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
196-387 |
5.41e-13 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 71.07 E-value: 5.41e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 196 WWA--ACLLAFL---VKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVI-LLDPLTKELAYPFIILALWG 269
Cdd:PRK06521 207 FWAslVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAIS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 270 AIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGI---LI--------QTPWGFTGAIILMIAHGLVSSALFCLANTVYERT 338
Cdd:PRK06521 287 AVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHAT 366
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 30065686 339 NTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLF 387
Cdd:PRK06521 367 GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-408 |
4.31e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 67.84 E-value: 4.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 187 LLPSWTNKIWWAACLLAFL---VKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVIL-----LDPLTKEL 258
Cdd:PRK12662 199 IQDLPTNRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPF 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 259 AYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERT 338
Cdd:PRK12662 279 NNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30065686 339 NTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWT-LILTGLAALITIIYT 408
Cdd:PRK12662 359 GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIgLVVLLVGSGLSVIYV 429
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
173-387 |
8.52e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 64.08 E-value: 8.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 173 GTLSMLLIQySPPTLLPswTNKIWWAACLLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLD 252
Cdd:PRK08042 162 GTLDLRLLD-MRMQQLP--LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 253 PLTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLV-------VGGILIQTP----WGFTGAIILMIAHG 321
Cdd:PRK08042 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHS 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30065686 322 LVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLF 387
Cdd:PRK08042 319 LFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 384
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-412 |
1.01e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 63.68 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR---MVILLDPLTKELA-YPFIILALWGAIMTGST 276
Cdd:PRK06589 217 FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKillYIFGLSYLQRIFAeFNWLIFIPIVSIFYSSL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 277 -CLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPL 355
Cdd:PRK06589 297 kALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPL 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 30065686 356 TATWWFIASLANLALPPFPNLTGEMAIMASLFYWSE-WTLILTGLAALI-TIIYTMYMF 412
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpWLSIIVMLVVIAsSILSALYLL 435
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-423 |
2.21e-10 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 63.02 E-value: 2.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMVilldPLTKELAYPFIILALWGAIMT--GS-TCLRQTDLKALIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITLfwGSlNAVKQTDLKGILAF 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 290 SSVSHMGLV-----VGGILIQTPWG--------FTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLT 356
Cdd:PRK12645 305 STVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPIT 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30065686 357 ATWWFIASLANLALPPFPN-LTGEMAIMA-------SLFYWSEWTLILTGLA---ALITIIYTMYMFMTTQWGPVPPS 423
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGfLSKEMFFESmlnateaNLFSLDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYKPE 462
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-345 |
1.28e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.94 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 97 ISLLISLqVFLIMAFGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGtlS 176
Cdd:MTH00062 75 FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNG--S 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 177 MLLIQYSPPTLLPSWTNKIWWaaclLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTK 256
Cdd:MTH00062 152 FNFSDWGSDDSVSLIVYYVLS----FMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 257 eLAYPFIILALwgAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYE 336
Cdd:MTH00062 228 -LGYLFLCCLF--SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYE 304
|
....*....
gi 30065686 337 RTNTRTLLI 345
Cdd:MTH00062 305 VSGSRNWVL 313
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-328 |
1.27e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.05 E-value: 1.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 9 LMLLPTTWLSSPKWLWTTTTAQSLMIASLSLTWLKRSAEPGwLTLNSYLAIDPLSTPLLVLTCWLLPLMIMASQNHISPE 88
Cdd:COG1007 19 VLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTG-TAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 89 PINRQRMYISLLISLQVFLIMAfGATEIILFYVMFEATLIPTLAIITRWGNQAERLNAGT-YF---------------LF 152
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFllgalssgfllygisLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 153 YTLVGSLPLLIALLILQKDVGTLSMLLIqyspptllpswtnkiwwAACLL--AFLVKMPLYGIHLWLPKAHVEAPIAGSM 230
Cdd:COG1007 177 YGATGSLNLAGIAAALAAGGANSPLLLL-----------------GLVLVlaGLAFKLSAVPFHMWTPDVYEGAPTPVTA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 231 VLAAVLlKLGGYGM-MR-MVILLDPLTKELAYPFIILA----LWGAIMTgstcLRQTDLKALIAYSSVSHMGLVVGGILI 304
Cdd:COG1007 240 FLATAP-KIAAFAAlLRlLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAA 314
|
330 340
....*....|....*....|....
gi 30065686 305 QTPWGFTGAIILMIAHGLVSSALF 328
Cdd:COG1007 315 GTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-418 |
1.43e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.24 E-value: 1.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYgmmrMVILLDPLTKELA---YPFIILALWGAIMTGSTCLRQTDLKALIAY 289
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIY----LVARLAPGFADVPvwrPTVLVLGLATMLLGGWRALRQHDLKLILAY 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 290 SSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLA 369
Cdd:PRK12644 298 GTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAG 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 30065686 370 LPPFPNLTGEMAIMASLFY------WSEWTLILTGLAALITIIYTMYmFMttqWG 418
Cdd:PRK12644 378 LPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSLR-FL---WG 428
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-373 |
2.35e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.19 E-value: 2.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 263 IILALWGAIMTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|.
gi 30065686 343 LLITRGMQTLLPLTATWWFIASLANLALPPF 373
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPF 380
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-378 |
5.15e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 55.22 E-value: 5.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 76 LMIMASQNHISPEPINRQRMYISLLISLQVFLIMAFGATEIILFyVMFEATLIPTLAIITRWGNQAERLNAGTYFLFYTL 155
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 156 VGSLPLLIALLILQKDVGTLSMLLIQYSPPTLLPSWTNKIWWAACLLAFL---VKMPLYGIHLWLPKAhVEAPIAGSMVL 232
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFL 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 233 -AAVLLKLGGYGMMRMvillDPLTKELAYPFIILALWGAI---MTGSTCLRQTDLKALIAYSSVSHMGLVV---GGILIQ 305
Cdd:PRK12649 252 hSATMVKAGVYLVARI----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMtmyGYTTYH 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30065686 306 TP-WGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTatwWFIASLANLALPPFPNLTG 378
Cdd:PRK12649 328 EPgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPIT---FIVASIAALAMAGIPPLNG 398
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
280-431 |
9.23e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 54.81 E-value: 9.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 280 QTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATW 359
Cdd:PRK12648 292 QHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATL 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 360 WFIASLANLALPPFpN--LTGEM----AIMASLFYWSEWTL-ILTGLAALITIIYTMYMFMTTQWGPVPPSMNNI--EPP 430
Cdd:PRK12648 372 AMVAAAAMAGVPLL-NgfLSKEMffaeTLDTHLLGSLDWLLpVAATLAGAFSVAYSLRFIHDVFFGPPPDDLPKTphEPP 450
|
.
gi 30065686 431 H 431
Cdd:PRK12648 451 R 451
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
2.68e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.90 E-value: 2.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 214 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MR-MVILLDPLTKELAYPFIILA----LWGAIMTgstcLRQTDLKALI 287
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRlLVVAFGGLSEDWQQVLAIIAiasmLVGNLAA----LSQTNIKRLL 298
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 30065686 288 AYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALF 328
Cdd:PRK05777 299 AYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
4.34e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 52.16 E-value: 4.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAFLVKMPLYGIHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRMVILL-DPLTKELAYPFIILALWGAIMT---- 273
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATlafg 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 274 GSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALFCLAN-----------------TVYE 336
Cdd:PRK12666 294 AIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYD 373
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30065686 337 RTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLF-------YWSEWTLIL-TGLAALI 403
Cdd:PRK12666 374 LDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLnppgagaAWWLWALVLlSGLAALI 448
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-371 |
5.44e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 51.88 E-value: 5.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 57 LAIDPLSTPLLVLTCWLLPLMIMASQNHISPEP-INRQRMYISLLISLQVFLIMAfgaTEIILFYVMFEATLIPTLAIIT 135
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLVTS---DNYLQLFIGWEGVGVCSYLLVA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 136 RWGNQAERLNAGTYFLFYTLVGSLPLLIALLILQKDVGTLSMLLIQ---YSPPTLLPSWTNKIWWAACLLAFLV------ 206
Cdd:MTH00032 153 FWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigilll 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 207 -----KMPLYGIHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVilldPLTKELAYPFIILALWGAI---MTGSTCL 278
Cdd:MTH00032 233 igcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 279 RQTDLKALIAYSSVSHMGLVVggILIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNT--RTLLITRGMQTLLPLT 356
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeQDMRKMGGLIHSIPFT 386
|
330
....*....|....*
gi 30065686 357 ATWWFIASLANLALP 371
Cdd:MTH00032 387 YTMMLIGSFSIMGLP 401
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-412 |
1.02e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 51.18 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 197 WAACLLAFLVKM-PL-----YGIHLWLPKAhVEAPI-------AGSMVLAAVLLklggygmmrmVILLDPLTKELAYPFI 263
Cdd:PRK07376 224 WLALLLCILVFLgPMaksaqFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL----------VARMYPVFEQFPAVMT 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 264 ILALWGAI---MTGSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPwgfTGAIILMIAHGLVSSALFCLANTV------ 334
Cdd:PRK07376 293 VIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLFLGSGSVihgmee 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 335 ---YERTNTRTLLITRGMQTLLPLTATWWFIASLANLALPPFPNLTGEMAIMASLFywsEWTLILTGLAALITIIYTMYM 411
Cdd:PRK07376 370 vvgHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAF---EANPALWFVGFLTAGMTAFYM 446
|
.
gi 30065686 412 F 412
Cdd:PRK07376 447 F 447
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
216-420 |
9.97e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 47.84 E-value: 9.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPlTKELAYPFIILALWGAIMTGSTCLRQTDLKALIAYSSVSHM 295
Cdd:MTH00207 201 WLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSS-TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 296 GLVVGGILIQTPwgfTGAIILMIAHGLVSSALF-CLANTVYERTNTRTLLITRGMQTLLPLTATWWFIaslANLALPPFP 374
Cdd:MTH00207 280 GVMMASLGLGMP---KLALFHLITHALFKALLFvCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLI---ANLALCGSP 353
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 30065686 375 NLTG----EMAIMASLFYWSEWTLILT-GLAALITIIYTMYMFMTTQWGPV 420
Cdd:MTH00207 354 FLSGfyskDLILESSLFYPHNSLMILMiFLATALTAAYSTRFTLAVLWSPN 404
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-409 |
2.50e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.61 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 212 GIHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygmmrmVILLDPLTKELAYPFIILALWG---AIMTGSTCLRQTD 282
Cdd:MTH00020 228 GLHTWLPDAMegptpVSALIhAATMVTAGVFL----------LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQND 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 283 LKALIAYSSVSHMGLVVGGILIQTpwgFTGAIILMIAHGLVSSALFCLANTVYERTN-TRTLLITRGMQTLLPLTATWWF 361
Cdd:MTH00020 298 LKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSVIHALSdEQDMRKMGGLISFLPLTYIFFL 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 30065686 362 IASlanLALPPFPNLTG--------EMAIMASLFYWSEWtliLTGLAALITIIYTM 409
Cdd:MTH00020 375 IGS---LSLMGFPYLTGfyskdlilELAFGQYYLIFAYW---LGCFSALLTAFYSI 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-415 |
5.93e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 45.32 E-value: 5.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRMVILLDPLTKELAYPFIILALWGAIMT-GS-TCL 278
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVP-KIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLiGNfGAL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 279 RQTDLKALIAYSSVSHMGLVVGGILIQTPWGFTGAIILMIAHGLVSSALF-CLANT-VYERTNTRTLLITRGMQTLLPLT 356
Cdd:TIGR01770 289 AQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPIL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30065686 357 ATWWFIASLANLALPPFPNLTGEMAIMASLFYWSEWTL-----ILTGLAALITIIYTMYMFMTT 415
Cdd:TIGR01770 369 AILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLaviavLTSVIGAFYYLRVVKVMYFDK 432
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
201-371 |
1.93e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 43.81 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 201 LLAFLVKMPLYGIHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRMVILLDPLTKELAYPFIILALwGAIMT 273
Cdd:MTH00208 243 LLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWFLSLCLILGSL-TALFA 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 274 GSTCLRQTDLKALIAYSSVSHMGLVVGGILIQTPWgftGAIILMIAHGLVSSALF-CLANTVYERTNTRTLLITRGMQTL 352
Cdd:MTH00208 315 ASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN---LALFHICTHAFFKAMLFlCSGSIIHSLNNEQDLRKMGGLSFL 391
|
170
....*....|....*....
gi 30065686 353 LPLTATWWFIASLANLALP 371
Cdd:MTH00208 392 LPVTSSCIILGSLALMGTP 410
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-404 |
2.31e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 202 LAFLVKMPLYGIHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMVILLDPLTKE-LAYPFIILALWGAIMTGSTCL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGyFGLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 279 RQTDLKALIAYSSVSHMG--LVVGGILIQTPWGFT--------GAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR 325
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 30065686 349 MQTLLPLTATwwfiASLAnlALPPFPNLTGEMAIMASLFYWSEWTLILTGLAALIT 404
Cdd:PRK06459 326 WIELGLTLLA----SSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-373 |
7.64e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 41.82 E-value: 7.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 214 HLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRM--VILLDPLTKELaypFIILALWGAIMTGSTCLRQTDLKALIAYSS 291
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLqpVLALSPVALTV---LIVIGTVTAIGASLVAIAQIDIKRALSYST 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 292 VSHMGLVVGGILIQTPwgfTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLITRGMQTLLPLTATWWFIASLANLALP 371
Cdd:PRK07390 317 SAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALL 393
|
..
gi 30065686 372 PF 373
Cdd:PRK07390 394 PL 395
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
191-304 |
2.80e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 39.87 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 191 WTNKIWWAACLL--AFLVKMPLYGIHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRMVILLDPLTKELAYPFIILALW 268
Cdd:MTH00144 79 NLSFSWFSMSLLllGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLYWLAYLLCVISVLSALV 157
|
90 100 110
....*....|....*....|....*....|....*.
gi 30065686 269 GAIMTgstcLRQTDLKALIAYSSVSHMGLVVGGILI 304
Cdd:MTH00144 158 GSIGG----LNQTQVRALLAYSSISHTGWMLVAILH 189
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
200-378 |
4.36e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.61 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 200 CLLAFLV---KMPLYGIHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygmmrmVILLDPLTKELAYPFIILALWGA 270
Cdd:MTH00210 214 CLLLFIGavgKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL----------IIRSGPLFEGSPLALTIVTILGA 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30065686 271 I---MTGSTCLRQTDLKALIAYSSVSHMGLVVggiLIQTPWGFTGAIILMIAHGLVSSALFCLANTVYERTNTRTLLitR 347
Cdd:MTH00210 284 LtafFAATVGVVQNDLKKVIAYSTCSQLGYMV---MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDM--R 358
|
170 180 190
....*....|....*....|....*....|....
gi 30065686 348 GMQTL---LPLTATWWFIASlanLALPPFPNLTG 378
Cdd:MTH00210 359 KMGGLiksIPFTYVMILIGS---LSLMGFPYLTG 389
|
|
| |
