Conserved domains on
[gi|300167524|gb|EFJ34129|]
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hypothetical protein SELMODRAFT_439153 [Selaginella moellendorffii]
Protein Classification
WASH complex subunit 5( domain architecture ID 10563167)
WASH complex subunit 5 (WASHC5) acts as a component of the WASH core complex that functions as a nucleation-promoting factor (NPF) at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization, playing a key role in the fission of tubules that serve as transport intermediates during endosome sorting
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||||||||||||
| Strumpellin | pfam10266 | Hereditary spastic paraplegia protein strumpellin; This is a family of proteins conserved from ... |
165-1205 | 0e+00 | |||||||||||||||
Hereditary spastic paraplegia protein strumpellin; This is a family of proteins conserved from plants to humans, in which two closely situated point mutations in the human protein lead to the condition of hereditary spastic paraplegia. Strumpellin contains one known domain called a spectrin repeat that consists of three alpha-helices of a characteriztic length wrapped in a left-handed coiled coil. The spectrin proteins have multiple copies of this repeat, which can then form multimers in the cell. Spectrin associates with the cell membrane via spectrin repeats in the ankyrin protein. The spectrin repeat is a structural platform for cytoskeletal protein assemblies. : Pssm-ID: 463035 Cd Length: 1082 Bit Score: 1378.07 E-value: 0e+00
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| Myosin_tail_1 super family | cl37647 | Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
12-171 | 3.80e-03 | |||||||||||||||
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. The actual alignment was detected with superfamily member pfam01576: Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 3.80e-03
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| Name | Accession | Description | Interval | E-value | |||||||||||||||
| Strumpellin | pfam10266 | Hereditary spastic paraplegia protein strumpellin; This is a family of proteins conserved from ... |
165-1205 | 0e+00 | |||||||||||||||
Hereditary spastic paraplegia protein strumpellin; This is a family of proteins conserved from plants to humans, in which two closely situated point mutations in the human protein lead to the condition of hereditary spastic paraplegia. Strumpellin contains one known domain called a spectrin repeat that consists of three alpha-helices of a characteriztic length wrapped in a left-handed coiled coil. The spectrin proteins have multiple copies of this repeat, which can then form multimers in the cell. Spectrin associates with the cell membrane via spectrin repeats in the ankyrin protein. The spectrin repeat is a structural platform for cytoskeletal protein assemblies. Pssm-ID: 463035 Cd Length: 1082 Bit Score: 1378.07 E-value: 0e+00
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| Myosin_tail_1 | pfam01576 | Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
12-171 | 3.80e-03 | |||||||||||||||
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 3.80e-03
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| Name | Accession | Description | Interval | E-value | |||||||||||||||
| Strumpellin | pfam10266 | Hereditary spastic paraplegia protein strumpellin; This is a family of proteins conserved from ... |
165-1205 | 0e+00 | |||||||||||||||
Hereditary spastic paraplegia protein strumpellin; This is a family of proteins conserved from plants to humans, in which two closely situated point mutations in the human protein lead to the condition of hereditary spastic paraplegia. Strumpellin contains one known domain called a spectrin repeat that consists of three alpha-helices of a characteriztic length wrapped in a left-handed coiled coil. The spectrin proteins have multiple copies of this repeat, which can then form multimers in the cell. Spectrin associates with the cell membrane via spectrin repeats in the ankyrin protein. The spectrin repeat is a structural platform for cytoskeletal protein assemblies. Pssm-ID: 463035 Cd Length: 1082 Bit Score: 1378.07 E-value: 0e+00
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| Myosin_tail_1 | pfam01576 | Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
12-171 | 3.80e-03 | |||||||||||||||
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament. Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 3.80e-03
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