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RecName: Full=Fibrocystin; AltName: Full=Polycystic kidney and hepatic disease 1 protein; AltName: Full=Polyductin; AltName: Full=Tigmin; Flags: Precursor
IPT_PCSR and G8 domain-containing protein( domain architecture ID 11535905)
protein containing domains IPT_PCSR, TIG, G8, and Beta_helix
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
G8 | pfam10162 | G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after ... |
1933-2049 | 5.68e-35 | ||||
G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix. : Pssm-ID: 462971 Cd Length: 121 Bit Score: 131.19 E-value: 5.68e-35
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G8 | pfam10162 | G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after ... |
2749-2872 | 1.91e-31 | ||||
G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix. : Pssm-ID: 462971 Cd Length: 121 Bit Score: 121.17 E-value: 1.91e-31
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1197-1294 | 9.95e-14 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. : Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 69.41 E-value: 9.95e-14
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
260-339 | 1.11e-12 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. : Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 66.32 E-value: 1.11e-12
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1389-1479 | 3.49e-12 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. : Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 65.17 E-value: 3.49e-12
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1019-1103 | 1.37e-09 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. : Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 57.46 E-value: 1.37e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
931-1004 | 5.43e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. : Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 55.53 E-value: 5.43e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1108-1192 | 9.94e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. : Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 55.15 E-value: 9.94e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1486-1569 | 7.08e-08 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. : Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 52.45 E-value: 7.08e-08
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1573-1640 | 9.50e-07 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. : Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 49.38 E-value: 9.50e-07
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
3002-3177 | 1.63e-06 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. : Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 50.87 E-value: 1.63e-06
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NosD super family | cl34609 | Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion ... |
2197-2348 | 9.42e-04 | ||||
Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism]; The actual alignment was detected with superfamily member COG3420: Pssm-ID: 442646 [Multi-domain] Cd Length: 343 Bit Score: 44.52 E-value: 9.42e-04
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
2290-2447 | 9.54e-03 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. : Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 39.70 E-value: 9.54e-03
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Name | Accession | Description | Interval | E-value | ||||
G8 | pfam10162 | G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after ... |
1933-2049 | 5.68e-35 | ||||
G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix. Pssm-ID: 462971 Cd Length: 121 Bit Score: 131.19 E-value: 5.68e-35
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G8 | pfam10162 | G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after ... |
2749-2872 | 1.91e-31 | ||||
G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix. Pssm-ID: 462971 Cd Length: 121 Bit Score: 121.17 E-value: 1.91e-31
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1197-1294 | 9.95e-14 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 69.41 E-value: 9.95e-14
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
260-339 | 1.11e-12 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 66.32 E-value: 1.11e-12
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1389-1479 | 3.49e-12 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 65.17 E-value: 3.49e-12
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1019-1103 | 1.37e-09 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 57.46 E-value: 1.37e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1389-1467 | 3.11e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 56.30 E-value: 3.11e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
931-1004 | 5.43e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 55.53 E-value: 5.43e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1108-1192 | 9.94e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 55.15 E-value: 9.94e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1486-1569 | 7.08e-08 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 52.45 E-value: 7.08e-08
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
261-321 | 4.62e-07 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 50.14 E-value: 4.62e-07
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1573-1640 | 9.50e-07 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 49.38 E-value: 9.50e-07
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
3002-3177 | 1.63e-06 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 50.87 E-value: 1.63e-06
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IPT | smart00429 | ig-like, plexins, transcription factors; |
260-311 | 2.39e-06 | ||||
ig-like, plexins, transcription factors; Pssm-ID: 214657 [Multi-domain] Cd Length: 90 Bit Score: 48.57 E-value: 2.39e-06
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1578-1642 | 1.32e-05 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 46.29 E-value: 1.32e-05
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NosD | COG3420 | Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion ... |
3017-3179 | 4.34e-04 | ||||
Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism]; Pssm-ID: 442646 [Multi-domain] Cd Length: 343 Bit Score: 45.68 E-value: 4.34e-04
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IPT | smart00429 | ig-like, plexins, transcription factors; |
1197-1294 | 4.95e-04 | ||||
ig-like, plexins, transcription factors; Pssm-ID: 214657 [Multi-domain] Cd Length: 90 Bit Score: 41.64 E-value: 4.95e-04
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NosD | COG3420 | Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion ... |
2197-2348 | 9.42e-04 | ||||
Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism]; Pssm-ID: 442646 [Multi-domain] Cd Length: 343 Bit Score: 44.52 E-value: 9.42e-04
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1200-1255 | 9.70e-04 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 40.89 E-value: 9.70e-04
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IPT | smart00429 | ig-like, plexins, transcription factors; |
1389-1445 | 1.89e-03 | ||||
ig-like, plexins, transcription factors; Pssm-ID: 214657 [Multi-domain] Cd Length: 90 Bit Score: 40.10 E-value: 1.89e-03
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1019-1102 | 7.73e-03 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 38.20 E-value: 7.73e-03
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
2290-2447 | 9.54e-03 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 39.70 E-value: 9.54e-03
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Name | Accession | Description | Interval | E-value | ||||
G8 | pfam10162 | G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after ... |
1933-2049 | 5.68e-35 | ||||
G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix. Pssm-ID: 462971 Cd Length: 121 Bit Score: 131.19 E-value: 5.68e-35
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G8 | pfam10162 | G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after ... |
2749-2872 | 1.91e-31 | ||||
G8 domain; This domain is found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix. Pssm-ID: 462971 Cd Length: 121 Bit Score: 121.17 E-value: 1.91e-31
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1197-1294 | 9.95e-14 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 69.41 E-value: 9.95e-14
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
260-339 | 1.11e-12 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 66.32 E-value: 1.11e-12
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1389-1479 | 3.49e-12 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 65.17 E-value: 3.49e-12
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IPT | cd00102 | Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as ... |
1389-1479 | 1.51e-10 | ||||
Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers. Pssm-ID: 238050 [Multi-domain] Cd Length: 89 Bit Score: 60.17 E-value: 1.51e-10
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1019-1103 | 1.37e-09 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 57.46 E-value: 1.37e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1389-1467 | 3.11e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 56.30 E-value: 3.11e-09
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IPT | cd00102 | Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as ... |
260-313 | 3.27e-09 | ||||
Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers. Pssm-ID: 238050 [Multi-domain] Cd Length: 89 Bit Score: 56.32 E-value: 3.27e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
931-1004 | 5.43e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 55.53 E-value: 5.43e-09
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1108-1192 | 9.94e-09 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 55.15 E-value: 9.94e-09
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IPT | cd00102 | Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as ... |
1197-1294 | 1.82e-08 | ||||
Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers. Pssm-ID: 238050 [Multi-domain] Cd Length: 89 Bit Score: 54.39 E-value: 1.82e-08
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1486-1569 | 7.08e-08 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 52.45 E-value: 7.08e-08
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
261-321 | 4.62e-07 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 50.14 E-value: 4.62e-07
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IPT_plexin_repeat1 | cd01180 | First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
260-316 | 8.67e-07 | ||||
First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238585 Cd Length: 94 Bit Score: 49.62 E-value: 8.67e-07
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IPT_PCSR | cd00603 | IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup ... |
1573-1640 | 9.50e-07 | ||||
IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238337 [Multi-domain] Cd Length: 90 Bit Score: 49.38 E-value: 9.50e-07
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IPT | cd00102 | Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as ... |
1019-1104 | 1.34e-06 | ||||
Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers. Pssm-ID: 238050 [Multi-domain] Cd Length: 89 Bit Score: 49.00 E-value: 1.34e-06
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
3002-3177 | 1.63e-06 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 50.87 E-value: 1.63e-06
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IPT_plexin_repeat2 | cd01179 | Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
261-313 | 1.97e-06 | ||||
Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238584 Cd Length: 85 Bit Score: 48.37 E-value: 1.97e-06
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IPT | smart00429 | ig-like, plexins, transcription factors; |
260-311 | 2.39e-06 | ||||
ig-like, plexins, transcription factors; Pssm-ID: 214657 [Multi-domain] Cd Length: 90 Bit Score: 48.57 E-value: 2.39e-06
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1578-1642 | 1.32e-05 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 46.29 E-value: 1.32e-05
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IPT | cd00102 | Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as ... |
1573-1640 | 6.21e-05 | ||||
Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers. Pssm-ID: 238050 [Multi-domain] Cd Length: 89 Bit Score: 44.37 E-value: 6.21e-05
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IPT_plexin_repeat1 | cd01180 | First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1197-1294 | 8.84e-05 | ||||
First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238585 Cd Length: 94 Bit Score: 44.23 E-value: 8.84e-05
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IPT_plexin_repeat2 | cd01179 | Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1587-1642 | 1.94e-04 | ||||
Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238584 Cd Length: 85 Bit Score: 42.98 E-value: 1.94e-04
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NosD | COG3420 | Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion ... |
3017-3179 | 4.34e-04 | ||||
Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism]; Pssm-ID: 442646 [Multi-domain] Cd Length: 343 Bit Score: 45.68 E-value: 4.34e-04
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IPT | smart00429 | ig-like, plexins, transcription factors; |
1197-1294 | 4.95e-04 | ||||
ig-like, plexins, transcription factors; Pssm-ID: 214657 [Multi-domain] Cd Length: 90 Bit Score: 41.64 E-value: 4.95e-04
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NosD | COG3420 | Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion ... |
2197-2348 | 9.42e-04 | ||||
Nitrous oxide reductase accessory protein NosD, contains tandem CASH domains [Inorganic ion transport and metabolism]; Pssm-ID: 442646 [Multi-domain] Cd Length: 343 Bit Score: 44.52 E-value: 9.42e-04
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1200-1255 | 9.70e-04 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 40.89 E-value: 9.70e-04
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IPT_plexin_repeat1 | cd01180 | First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1019-1103 | 1.62e-03 | ||||
First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238585 Cd Length: 94 Bit Score: 40.38 E-value: 1.62e-03
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IPT | smart00429 | ig-like, plexins, transcription factors; |
1389-1445 | 1.89e-03 | ||||
ig-like, plexins, transcription factors; Pssm-ID: 214657 [Multi-domain] Cd Length: 90 Bit Score: 40.10 E-value: 1.89e-03
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IPT_plexin_repeat2 | cd01179 | Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1198-1275 | 2.09e-03 | ||||
Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238584 Cd Length: 85 Bit Score: 39.90 E-value: 2.09e-03
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IPT_plexin_repeat2 | cd01179 | Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1389-1467 | 3.12e-03 | ||||
Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238584 Cd Length: 85 Bit Score: 39.51 E-value: 3.12e-03
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
2991-3109 | 5.68e-03 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 40.47 E-value: 5.68e-03
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IPT_plexin_repeat1 | cd01180 | First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1389-1462 | 6.94e-03 | ||||
First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238585 Cd Length: 94 Bit Score: 38.84 E-value: 6.94e-03
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IPT_plexin_repeat3 | cd01181 | Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are ... |
1389-1453 | 7.19e-03 | ||||
Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains. Pssm-ID: 238586 Cd Length: 99 Bit Score: 38.94 E-value: 7.19e-03
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TIG | pfam01833 | IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
1019-1102 | 7.73e-03 | ||||
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members. Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 38.20 E-value: 7.73e-03
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Beta_helix | pfam13229 | Right handed beta helix region; This region contains a parallel beta helix region that shares ... |
2290-2447 | 9.54e-03 | ||||
Right handed beta helix region; This region contains a parallel beta helix region that shares some similarity with Pectate lyases. Pssm-ID: 463811 [Multi-domain] Cd Length: 158 Bit Score: 39.70 E-value: 9.54e-03
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Blast search parameters | ||||
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