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Conserved domains on  [gi|295982293]
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Chain W, VP1

Protein Classification

Reovirus_L2 domain-containing protein( domain architecture ID 10532662)

Reovirus_L2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Reovirus_L2 pfam06016
Reovirus core-spike protein lambda-2 (L2); This family consists of several Reovirus core-spike ...
 1-1298 0e+00

Reovirus core-spike protein lambda-2 (L2); This family consists of several Reovirus core-spike protein lambda-2 (L2) sequences. The reovirus L2 genome segment encodes the core spike protein lambda-2, which mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts.


:

Pssm-ID: 283634  Cd Length: 1297  Bit Score: 2106.52  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293     1 MAAVFGIQLVPKLNTSTTRRTFLPLRFDLLLDRLQSTNLHGVLYRALDFNPVDRSATVIQTYPPLNAWSPHHAFIENPLD 80
Cdd:pfam06016    1 MAAVWGIQLVDKLNTPTTRRTFLPLRFDLLLDRLETRTRHYVLHRALDFNPRTRSATVVQLYPPLNAWVPDTAFYGFPGD 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293    81 YRDWTEFIHDRALAFVGVLTQRYPLTQNAQRYTNPLVLGAAFGDFLNARSIDIFLDRLFYDPTQDSPITAITKFPYQWTI 160
Cdd:pfam06016   81 YRDWEEFIHERLRVFKYVLLQRYPITNYANRYVNPLVAGAAFGDFLNARSIDIFLNQLFYDPLLDSPITDILGFPYQWTQ 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   161 DSNVTTDSVRTSAGCKYITLYGYdPSRPSTPATYGKHRPTYATVFYYSTLPARSRLLANLAAGPTVLEHFDSPTYGPHLL 240
Cdd:pfam06016  161 FFQVHGDVLRTAAGCKYLQMYNY-SSRDDTPPTYGKHRPDYATVFYYDTLEARSRFLATHDAGPTVLEHFDSPTYGPHYL 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   241 LPQTGDVLGYSSSLISQAALLMVESVMDALRDNANASASTAVTRLDQSYHPVTSFDPSTFNTLLQRATNLALLAVQGVQS 320
Cdd:pfam06016  240 LPQLGDVLGYPSSIISQADLLMLESVMDQLRANVRASASTAVTRLDQCYHPVWGFDPVGEDSLTYRLTNLALLAVQGYQL 319

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   321 ESAIPAIPTMSDVRSFVARLMAEGDPQQWFPYRVDQILYWPESPFVPPIGPFYAPFRPVNFPFTTGSYTVVPDASRPLRL 400
Cdd:pfam06016  320 ERAIPAQPTNRDVRSFVARLMSEGVNQTWFPYRYDQILYWPDSPFVVPGGTFYAYVRQLNFPFTTGAYTSVPDAPRPLRW 399

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   401 LPQYRNATITVQQADDAYEDTALSPLITTHGFCVTGGVFTSIYDISGDPTAYPPAQLVDAPNDYFDRERMARRDLFRRLR 480
Cdd:pfam06016  400 LPQYRNATITIQQAADAYEDLMVSPLRPDHGFCWVGGVLSYYVDISRDPTVVPSSELPQLPDTYFDGDRMARRSLFRRLR 479

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   481 APADRSAIKDRAVFDFLASLVNPTTANPVLDTSFSMAYLGASSAHANADEPVILADIRSGSIPGLPIPRRIVQFGYDVVH 560
Cdd:pfam06016  480 KPGDRSLIKDTAVFKFLASLVNPNTAKPYLRTGFSVAYLGASAAHAGADEPLILADWRQGSIPGLPIPSRIRQFGYDVVH 559

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   561 GSLLDLSRAVPTGTFGLVYADLDQVEDAGTDMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHAT 640
Cdd:pfam06016  560 GSLLDLARAVPTGTFGLVYADLDQVEDAGTDLPAANRAAEAMLGTCLQMTTAGGVFVLKVNFPTRAFWTQIFNKYATNAT 639

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   641 TLHLVKPTIVNSSEVFLVFGGRQSNGALRSTTALQRALLSLYARNAAIDRAVTHIPFFGVPDDGTSDLGIDAVRLFDPMF 720
Cdd:pfam06016  640 TLHLVKPFVVNSSEVFFVAFGRQSNGALTWTTGLQRALLDHYARNAAIDTISTHLPSFGYVDDGTSVLGIEAIRLFDPGF 719

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   721 SDAVANLPSNALASLVSRVVPSSIMFTRVPSNGPVSTTIYGKRTFLSNRRRARLRDVPMLITTTLVHQRRFTTPPTFTLF 800
Cdd:pfam06016  720 SNAMTNAARNALAGLCANVVPSSIMISRVPSNGPVSTTITGKRTFLSARRRARLRYLPLLDPTSLEHQRRFTLPPTFVLF 799

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   801 SSEAVPVTTLVAAGYNSFISEQTRNPNLAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYS 880
Cdd:pfam06016  800 ASEHVCVTTLVAAGYNFEVSSAVYDGDVAHLLDLGTGPECRILSLIPPTSPVTMVDIRPCAELMGCWDPRTTAYLQLDYL 879

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   881 TAAFWNGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMWLQLNTPLYEVSSLPDLIEIDLRDHVYRFNG 960
Cdd:pfam06016  880 SAAFWNGIRCDIVTAIFTLGAAAAGKSMTFDAAFQQLIPVIVKAGATRLWLQVNCPLDVVRSIPGLIEIDLRNKRYRFNK 959

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   961 GERVEPYADPVPLQQAIAALLPAAALSWHTLSPTCDWLPYIIGVGSPLNLSDINTAISYSRLTPILHIDTTTPPLRVNPV 1040
Cdd:pfam06016  960 GERDEPYSDPDPLQQICRAAWPNASLSWVTLSPTCRWLPYIIGEGSTLSLSSIRTAELYSKLTPILRIDTHGLPLRVNPI 1039

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1041 PTPLNQQCAIRITSLDPAAVLSVQHNGVEVIGGTPGNVISVAGAAALQYILANQEFLLQFTPTLPGIFDVFLTTLGQPPV 1120
Cdd:pfam06016 1040 PTPLGQQCAIRIPGFDPAAVLNCYHNGVLVISGTPDVNISMIGQAALQYIAANGEFLLQMTPTLAGIFDVALTGSGQPPV 1119

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1121 PRGSFTITPPPTTVALNMPPPRQLDFTDVGNDARITCDPYYQLAVCIFKDGQYVRVNPEKASVVTNAPNRDLHFVLDLAD 1200
Cdd:pfam06016 1120 PRGSFTITSPPTTVDITMAWPAQLDFTDAGNDVDITCDPYYRLAVCIRIDGQYVRVNPEKAQVFTSAPGRVLHFVLDLAD 1199

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1201 NHVLLYLCDVTPSGLGDRIAFPIVDIYRIAFPRNTPVRASLPYTGGGAHLTSGGNPFMSLTTPPAVLPAGVALAALSTSV 1280
Cdd:pfam06016 1200 NHVLYYLCDVTPRDVGFYIAHPLQDIYTITFPTNTPLRASLPYMGGGAHVKESGNPICSLTSPPFVLPAGWALAALTTSW 1279

                         1290
                   ....*....|....*...
gi 295982293  1281 ATQYPTYTLPAGVYEYVI 1298
Cdd:pfam06016 1280 SPSYPTYTLPAGDYTYVP 1297
 
Name Accession Description Interval E-value
Reovirus_L2 pfam06016
Reovirus core-spike protein lambda-2 (L2); This family consists of several Reovirus core-spike ...
 1-1298 0e+00

Reovirus core-spike protein lambda-2 (L2); This family consists of several Reovirus core-spike protein lambda-2 (L2) sequences. The reovirus L2 genome segment encodes the core spike protein lambda-2, which mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts.


Pssm-ID: 283634  Cd Length: 1297  Bit Score: 2106.52  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293     1 MAAVFGIQLVPKLNTSTTRRTFLPLRFDLLLDRLQSTNLHGVLYRALDFNPVDRSATVIQTYPPLNAWSPHHAFIENPLD 80
Cdd:pfam06016    1 MAAVWGIQLVDKLNTPTTRRTFLPLRFDLLLDRLETRTRHYVLHRALDFNPRTRSATVVQLYPPLNAWVPDTAFYGFPGD 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293    81 YRDWTEFIHDRALAFVGVLTQRYPLTQNAQRYTNPLVLGAAFGDFLNARSIDIFLDRLFYDPTQDSPITAITKFPYQWTI 160
Cdd:pfam06016   81 YRDWEEFIHERLRVFKYVLLQRYPITNYANRYVNPLVAGAAFGDFLNARSIDIFLNQLFYDPLLDSPITDILGFPYQWTQ 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   161 DSNVTTDSVRTSAGCKYITLYGYdPSRPSTPATYGKHRPTYATVFYYSTLPARSRLLANLAAGPTVLEHFDSPTYGPHLL 240
Cdd:pfam06016  161 FFQVHGDVLRTAAGCKYLQMYNY-SSRDDTPPTYGKHRPDYATVFYYDTLEARSRFLATHDAGPTVLEHFDSPTYGPHYL 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   241 LPQTGDVLGYSSSLISQAALLMVESVMDALRDNANASASTAVTRLDQSYHPVTSFDPSTFNTLLQRATNLALLAVQGVQS 320
Cdd:pfam06016  240 LPQLGDVLGYPSSIISQADLLMLESVMDQLRANVRASASTAVTRLDQCYHPVWGFDPVGEDSLTYRLTNLALLAVQGYQL 319

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   321 ESAIPAIPTMSDVRSFVARLMAEGDPQQWFPYRVDQILYWPESPFVPPIGPFYAPFRPVNFPFTTGSYTVVPDASRPLRL 400
Cdd:pfam06016  320 ERAIPAQPTNRDVRSFVARLMSEGVNQTWFPYRYDQILYWPDSPFVVPGGTFYAYVRQLNFPFTTGAYTSVPDAPRPLRW 399

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   401 LPQYRNATITVQQADDAYEDTALSPLITTHGFCVTGGVFTSIYDISGDPTAYPPAQLVDAPNDYFDRERMARRDLFRRLR 480
Cdd:pfam06016  400 LPQYRNATITIQQAADAYEDLMVSPLRPDHGFCWVGGVLSYYVDISRDPTVVPSSELPQLPDTYFDGDRMARRSLFRRLR 479

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   481 APADRSAIKDRAVFDFLASLVNPTTANPVLDTSFSMAYLGASSAHANADEPVILADIRSGSIPGLPIPRRIVQFGYDVVH 560
Cdd:pfam06016  480 KPGDRSLIKDTAVFKFLASLVNPNTAKPYLRTGFSVAYLGASAAHAGADEPLILADWRQGSIPGLPIPSRIRQFGYDVVH 559

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   561 GSLLDLSRAVPTGTFGLVYADLDQVEDAGTDMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHAT 640
Cdd:pfam06016  560 GSLLDLARAVPTGTFGLVYADLDQVEDAGTDLPAANRAAEAMLGTCLQMTTAGGVFVLKVNFPTRAFWTQIFNKYATNAT 639

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   641 TLHLVKPTIVNSSEVFLVFGGRQSNGALRSTTALQRALLSLYARNAAIDRAVTHIPFFGVPDDGTSDLGIDAVRLFDPMF 720
Cdd:pfam06016  640 TLHLVKPFVVNSSEVFFVAFGRQSNGALTWTTGLQRALLDHYARNAAIDTISTHLPSFGYVDDGTSVLGIEAIRLFDPGF 719

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   721 SDAVANLPSNALASLVSRVVPSSIMFTRVPSNGPVSTTIYGKRTFLSNRRRARLRDVPMLITTTLVHQRRFTTPPTFTLF 800
Cdd:pfam06016  720 SNAMTNAARNALAGLCANVVPSSIMISRVPSNGPVSTTITGKRTFLSARRRARLRYLPLLDPTSLEHQRRFTLPPTFVLF 799

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   801 SSEAVPVTTLVAAGYNSFISEQTRNPNLAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYS 880
Cdd:pfam06016  800 ASEHVCVTTLVAAGYNFEVSSAVYDGDVAHLLDLGTGPECRILSLIPPTSPVTMVDIRPCAELMGCWDPRTTAYLQLDYL 879

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   881 TAAFWNGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMWLQLNTPLYEVSSLPDLIEIDLRDHVYRFNG 960
Cdd:pfam06016  880 SAAFWNGIRCDIVTAIFTLGAAAAGKSMTFDAAFQQLIPVIVKAGATRLWLQVNCPLDVVRSIPGLIEIDLRNKRYRFNK 959

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   961 GERVEPYADPVPLQQAIAALLPAAALSWHTLSPTCDWLPYIIGVGSPLNLSDINTAISYSRLTPILHIDTTTPPLRVNPV 1040
Cdd:pfam06016  960 GERDEPYSDPDPLQQICRAAWPNASLSWVTLSPTCRWLPYIIGEGSTLSLSSIRTAELYSKLTPILRIDTHGLPLRVNPI 1039

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1041 PTPLNQQCAIRITSLDPAAVLSVQHNGVEVIGGTPGNVISVAGAAALQYILANQEFLLQFTPTLPGIFDVFLTTLGQPPV 1120
Cdd:pfam06016 1040 PTPLGQQCAIRIPGFDPAAVLNCYHNGVLVISGTPDVNISMIGQAALQYIAANGEFLLQMTPTLAGIFDVALTGSGQPPV 1119

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1121 PRGSFTITPPPTTVALNMPPPRQLDFTDVGNDARITCDPYYQLAVCIFKDGQYVRVNPEKASVVTNAPNRDLHFVLDLAD 1200
Cdd:pfam06016 1120 PRGSFTITSPPTTVDITMAWPAQLDFTDAGNDVDITCDPYYRLAVCIRIDGQYVRVNPEKAQVFTSAPGRVLHFVLDLAD 1199

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1201 NHVLLYLCDVTPSGLGDRIAFPIVDIYRIAFPRNTPVRASLPYTGGGAHLTSGGNPFMSLTTPPAVLPAGVALAALSTSV 1280
Cdd:pfam06016 1200 NHVLYYLCDVTPRDVGFYIAHPLQDIYTITFPTNTPLRASLPYMGGGAHVKESGNPICSLTSPPFVLPAGWALAALTTSW 1279

                         1290
                   ....*....|....*...
gi 295982293  1281 ATQYPTYTLPAGVYEYVI 1298
Cdd:pfam06016 1280 SPSYPTYTLPAGDYTYVP 1297
 
Name Accession Description Interval E-value
Reovirus_L2 pfam06016
Reovirus core-spike protein lambda-2 (L2); This family consists of several Reovirus core-spike ...
 1-1298 0e+00

Reovirus core-spike protein lambda-2 (L2); This family consists of several Reovirus core-spike protein lambda-2 (L2) sequences. The reovirus L2 genome segment encodes the core spike protein lambda-2, which mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts.


Pssm-ID: 283634  Cd Length: 1297  Bit Score: 2106.52  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293     1 MAAVFGIQLVPKLNTSTTRRTFLPLRFDLLLDRLQSTNLHGVLYRALDFNPVDRSATVIQTYPPLNAWSPHHAFIENPLD 80
Cdd:pfam06016    1 MAAVWGIQLVDKLNTPTTRRTFLPLRFDLLLDRLETRTRHYVLHRALDFNPRTRSATVVQLYPPLNAWVPDTAFYGFPGD 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293    81 YRDWTEFIHDRALAFVGVLTQRYPLTQNAQRYTNPLVLGAAFGDFLNARSIDIFLDRLFYDPTQDSPITAITKFPYQWTI 160
Cdd:pfam06016   81 YRDWEEFIHERLRVFKYVLLQRYPITNYANRYVNPLVAGAAFGDFLNARSIDIFLNQLFYDPLLDSPITDILGFPYQWTQ 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   161 DSNVTTDSVRTSAGCKYITLYGYdPSRPSTPATYGKHRPTYATVFYYSTLPARSRLLANLAAGPTVLEHFDSPTYGPHLL 240
Cdd:pfam06016  161 FFQVHGDVLRTAAGCKYLQMYNY-SSRDDTPPTYGKHRPDYATVFYYDTLEARSRFLATHDAGPTVLEHFDSPTYGPHYL 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   241 LPQTGDVLGYSSSLISQAALLMVESVMDALRDNANASASTAVTRLDQSYHPVTSFDPSTFNTLLQRATNLALLAVQGVQS 320
Cdd:pfam06016  240 LPQLGDVLGYPSSIISQADLLMLESVMDQLRANVRASASTAVTRLDQCYHPVWGFDPVGEDSLTYRLTNLALLAVQGYQL 319

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   321 ESAIPAIPTMSDVRSFVARLMAEGDPQQWFPYRVDQILYWPESPFVPPIGPFYAPFRPVNFPFTTGSYTVVPDASRPLRL 400
Cdd:pfam06016  320 ERAIPAQPTNRDVRSFVARLMSEGVNQTWFPYRYDQILYWPDSPFVVPGGTFYAYVRQLNFPFTTGAYTSVPDAPRPLRW 399

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   401 LPQYRNATITVQQADDAYEDTALSPLITTHGFCVTGGVFTSIYDISGDPTAYPPAQLVDAPNDYFDRERMARRDLFRRLR 480
Cdd:pfam06016  400 LPQYRNATITIQQAADAYEDLMVSPLRPDHGFCWVGGVLSYYVDISRDPTVVPSSELPQLPDTYFDGDRMARRSLFRRLR 479

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   481 APADRSAIKDRAVFDFLASLVNPTTANPVLDTSFSMAYLGASSAHANADEPVILADIRSGSIPGLPIPRRIVQFGYDVVH 560
Cdd:pfam06016  480 KPGDRSLIKDTAVFKFLASLVNPNTAKPYLRTGFSVAYLGASAAHAGADEPLILADWRQGSIPGLPIPSRIRQFGYDVVH 559

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   561 GSLLDLSRAVPTGTFGLVYADLDQVEDAGTDMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHAT 640
Cdd:pfam06016  560 GSLLDLARAVPTGTFGLVYADLDQVEDAGTDLPAANRAAEAMLGTCLQMTTAGGVFVLKVNFPTRAFWTQIFNKYATNAT 639

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   641 TLHLVKPTIVNSSEVFLVFGGRQSNGALRSTTALQRALLSLYARNAAIDRAVTHIPFFGVPDDGTSDLGIDAVRLFDPMF 720
Cdd:pfam06016  640 TLHLVKPFVVNSSEVFFVAFGRQSNGALTWTTGLQRALLDHYARNAAIDTISTHLPSFGYVDDGTSVLGIEAIRLFDPGF 719

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   721 SDAVANLPSNALASLVSRVVPSSIMFTRVPSNGPVSTTIYGKRTFLSNRRRARLRDVPMLITTTLVHQRRFTTPPTFTLF 800
Cdd:pfam06016  720 SNAMTNAARNALAGLCANVVPSSIMISRVPSNGPVSTTITGKRTFLSARRRARLRYLPLLDPTSLEHQRRFTLPPTFVLF 799

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   801 SSEAVPVTTLVAAGYNSFISEQTRNPNLAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYS 880
Cdd:pfam06016  800 ASEHVCVTTLVAAGYNFEVSSAVYDGDVAHLLDLGTGPECRILSLIPPTSPVTMVDIRPCAELMGCWDPRTTAYLQLDYL 879

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   881 TAAFWNGIRCDSATAIFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMWLQLNTPLYEVSSLPDLIEIDLRDHVYRFNG 960
Cdd:pfam06016  880 SAAFWNGIRCDIVTAIFTLGAAAAGKSMTFDAAFQQLIPVIVKAGATRLWLQVNCPLDVVRSIPGLIEIDLRNKRYRFNK 959

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293   961 GERVEPYADPVPLQQAIAALLPAAALSWHTLSPTCDWLPYIIGVGSPLNLSDINTAISYSRLTPILHIDTTTPPLRVNPV 1040
Cdd:pfam06016  960 GERDEPYSDPDPLQQICRAAWPNASLSWVTLSPTCRWLPYIIGEGSTLSLSSIRTAELYSKLTPILRIDTHGLPLRVNPI 1039

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1041 PTPLNQQCAIRITSLDPAAVLSVQHNGVEVIGGTPGNVISVAGAAALQYILANQEFLLQFTPTLPGIFDVFLTTLGQPPV 1120
Cdd:pfam06016 1040 PTPLGQQCAIRIPGFDPAAVLNCYHNGVLVISGTPDVNISMIGQAALQYIAANGEFLLQMTPTLAGIFDVALTGSGQPPV 1119

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1121 PRGSFTITPPPTTVALNMPPPRQLDFTDVGNDARITCDPYYQLAVCIFKDGQYVRVNPEKASVVTNAPNRDLHFVLDLAD 1200
Cdd:pfam06016 1120 PRGSFTITSPPTTVDITMAWPAQLDFTDAGNDVDITCDPYYRLAVCIRIDGQYVRVNPEKAQVFTSAPGRVLHFVLDLAD 1199

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295982293  1201 NHVLLYLCDVTPSGLGDRIAFPIVDIYRIAFPRNTPVRASLPYTGGGAHLTSGGNPFMSLTTPPAVLPAGVALAALSTSV 1280
Cdd:pfam06016 1200 NHVLYYLCDVTPRDVGFYIAHPLQDIYTITFPTNTPLRASLPYMGGGAHVKESGNPICSLTSPPFVLPAGWALAALTTSW 1279

                         1290
                   ....*....|....*...
gi 295982293  1281 ATQYPTYTLPAGVYEYVI 1298
Cdd:pfam06016 1280 SPSYPTYTLPAGDYTYVP 1297
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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