|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
1.18e-62 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 186.28 E-value: 1.18e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 295442690 81 QLPSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136 81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-116 |
1.62e-48 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 150.53 E-value: 1.62e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 3 LVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00069 1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80
|
90 100 110
....*....|....*....|....*....|....
gi 295442690 83 PSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00069 81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
2.54e-46 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 145.02 E-value: 2.54e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 3 LVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00113 2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81
|
90 100 110
....*....|....*....|....*....|...
gi 295442690 83 PSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWA 115
Cdd:MTH00113 82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
23-116 |
4.59e-39 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 126.59 E-value: 4.59e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLG 102
Cdd:MTH00106 22 FWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALS 101
|
90
....*....|....
gi 295442690 103 LIYEWLQGGLEWAE 116
Cdd:MTH00106 102 LAYEWTQKGLEWTE 115
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-114 |
8.34e-35 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 115.77 E-value: 8.34e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80
|
90 100 110
....*....|....*....|....*....|....
gi 295442690 81 QLPSPlsTFLWASTVLVLLTLGLIYEWLQGGLEW 114
Cdd:MTH00203 81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
2.88e-34 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 114.69 E-value: 2.88e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 295442690 81 QLPSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00042 81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
|
|
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
31-114 |
1.14e-25 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 92.53 E-value: 1.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWLQG 110
Cdd:MTH00161 30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109
|
....
gi 295442690 111 GLEW 114
Cdd:MTH00161 110 ALEW 113
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
23-113 |
4.90e-24 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 87.86 E-value: 4.90e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPS-PLSTFLWASTVLVLLTL 101
Cdd:pfam00507 5 RLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAILLV 82
|
90
....*....|..
gi 295442690 102 GLIYEWLQGGLE 113
Cdd:pfam00507 83 GLVYAWKKGALE 94
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
31-116 |
5.07e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 86.06 E-value: 5.07e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWLQG 110
Cdd:MTH00148 32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEG 111
|
....*.
gi 295442690 111 GLEWAE 116
Cdd:MTH00148 112 SLDWVS 117
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
31-116 |
4.53e-22 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 83.50 E-value: 4.53e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWLQG 110
Cdd:MTH00202 32 DREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEG 111
|
....*.
gi 295442690 111 GLEWAE 116
Cdd:MTH00202 112 SLDWVK 117
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
30-114 |
1.56e-19 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 77.06 E-value: 1.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPSPLSTFLWASTVLVLLTLG-LIYEWL 108
Cdd:MTH00055 34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMYLFLIILTIgLIYEWV 111
|
....*.
gi 295442690 109 QGGLEW 114
Cdd:MTH00055 112 KGGLEW 117
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
29-115 |
2.44e-19 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 76.82 E-value: 2.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 29 TPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:MTH00012 30 TADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWR 109
|
....*..
gi 295442690 109 QGGLEWA 115
Cdd:MTH00012 110 EGSLDWS 116
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
23-114 |
1.05e-18 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 74.71 E-value: 1.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWAsTVLVLLTLG 102
Cdd:MTH00018 22 YFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWTMV-GFLFILTLG 100
|
90
....*....|..
gi 295442690 103 LIYEWLQGGLEW 114
Cdd:MTH00018 101 LIYEWIKGGLEW 112
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
30-115 |
1.07e-18 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 74.90 E-value: 1.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLP-SPLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:PRK06602 37 PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFReIGWLGFVEAMIFILVLLVGLVYLWR 114
|
....*..
gi 295442690 109 QGGLEWA 115
Cdd:PRK06602 115 KGALDWE 121
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
30-114 |
6.34e-18 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 72.85 E-value: 6.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPS-PLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:COG0838 34 PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILLVGLIYAWK 111
|
....*.
gi 295442690 109 QGGLEW 114
Cdd:COG0838 112 KGALEW 117
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
30-114 |
9.42e-15 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 64.95 E-value: 9.42e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWG---DQLpsPLSTFLWASTVLVLLTLGLIYE 106
Cdd:MTH00030 39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSivfNQL--NLFSFWIVYTFLIVLAIGLAYE 114
|
....*...
gi 295442690 107 WLQGGLEW 114
Cdd:MTH00030 115 WIKGGLEW 122
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
33-114 |
1.16e-08 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 49.22 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 33 EKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWG---DQLpsPLSTFLWASTVLVLLTLGLIYEWLQ 109
Cdd:CHL00022 39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAmsfDVL--GVSAFIEALIFVLILIVGLVYAWRK 114
|
....*
gi 295442690 110 GGLEW 114
Cdd:CHL00022 115 GALEW 119
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
34-114 |
2.97e-08 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 48.13 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 34 KLSPYECGFDPLGSARLP--FSLRFFLVAILFLLFDLEIALLLPlpWGDQLPSpLSTFLWASTVLVLLTLGL--IYEWLQ 109
Cdd:PRK07928 37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDA-LGVFGLVEMALFMLTVFVayAYVWRR 113
|
....*
gi 295442690 110 GGLEW 114
Cdd:PRK07928 114 GGLEW 118
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
34-74 |
6.79e-06 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 41.80 E-value: 6.79e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 295442690 34 KLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092 34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
24-114 |
3.71e-05 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 40.11 E-value: 3.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 24 WLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPlpWG---DQLPspLSTFLWASTVLVLLT 100
Cdd:PRK07756 32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAvayDKLG--LFALIEMLIFVVMLL 107
|
90
....*....|....
gi 295442690 101 LGLIYEWLQGGLEW 114
Cdd:PRK07756 108 VGLAYAWKKKVLQW 121
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
34-114 |
4.27e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 40.04 E-value: 4.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690 34 KLSPYECGFDPLGSARlPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLpspLSTFLWASTVLVLLTLG--LIYEWLQGG 111
Cdd:PRK08489 47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKL---LGLFGLIEMLLFIVLLTigFIYAWKKGA 122
|
...
gi 295442690 112 LEW 114
Cdd:PRK08489 123 LEW 125
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
36-77 |
6.82e-05 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 39.11 E-value: 6.82e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 295442690 36 SPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060 39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
|
|
|