|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 734.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 81 QRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 161 LIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 321 LTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 401 LVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGF 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 600.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 81 QRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 161 LIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 321 LTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 292606418 401 LVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITG 456
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISG 456
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 566.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 81 QRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 161 LIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 321 LTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 292606418 401 LVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
1.44e-169 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 484.84 E-value: 1.44e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTF-SSDPLTTPLLMLTTWLLPLTIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYmATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 80 SQRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 160 LLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 240 GYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 320 GLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 400 MLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.60e-155 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 448.62 E-value: 1.60e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 3 KLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPT-FSSDPLTTPLLMLTTWLLPLTIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLyLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 82 RHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 162 IALIYTHNTLGSLNILLLTLTAQElsnSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 242 GMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 322 TSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 292606418 402 VTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDII 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
4.25e-134 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 394.34 E-value: 4.25e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPL-LFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLfLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 80 SQRHLSNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 160 LLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 240 GYGMMRLTLILN-PLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 319 HGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 399 NMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIIT 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
1.72e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 351.38 E-value: 1.72e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINttthSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQS----LLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 81 QRHLSNEPLSrkKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPL 160
Cdd:MTH00163 77 ESVYKKNNYS--NLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 161 LIALIYTHNTLGSLNILLLTLtaqelsNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 321 LTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 401 LVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGF 457
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
39-458 |
1.11e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 335.27 E-value: 1.11e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 39 LLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNepLSRKKLYLSMLISLQISLIMTFTATELIMF 118
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 119 YIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWannLMWLA 198
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 199 YTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLR 278
Cdd:MTH00150 158 VFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 279 QTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFW 358
Cdd:MTH00150 238 QSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLW 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 359 WLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMF 438
Cdd:MTH00150 318 WFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLL 397
|
410 420
....*....|....*....|
gi 292606418 439 MHLSPILLLSLNPDIITGFS 458
Cdd:MTH00150 398 LHWVPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.40e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 318.61 E-value: 1.40e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTwLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 81 QRHLSNEPLSrkKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPL 160
Cdd:MTH00014 80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 161 LIALIYTHNTLGSLNILLLTLTAqelSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 241 YGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 321 LTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 292606418 401 LVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIIT 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-454 |
7.30e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 316.54 E-value: 7.30e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 8 TIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 88 plSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYT 167
Cdd:MTH00205 85 --KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 168 HNTLGSLNILLLTltaQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLT 247
Cdd:MTH00205 163 NSLNFSLSMFFNF---PLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 248 LILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 328 CLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYS 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 292606418 408 LYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDII 454
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
91-458 |
6.64e-80 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 255.78 E-value: 6.64e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNqPERLNAGTYFLFYTLVGSLPLLIALIYTHNT 170
Cdd:COG1008 109 RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 171 LGSLNILLLTLTAQELSNSWANnLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLIL 250
Cdd:COG1008 188 AGALTFDIAELAAAPLPLTAQL-LLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 251 NPL-TKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCL 329
Cdd:COG1008 267 FPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLL 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 330 ANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLY 409
Cdd:COG1008 347 VGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLW 426
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 292606418 410 MFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITGFS 458
Cdd:COG1008 427 MYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDLI 475
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
91-455 |
1.55e-72 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 237.02 E-value: 1.55e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGnQPERLNAGTYFLFYTLVGSLPLLIALIY---- 166
Cdd:PRK05846 109 RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIIYlvvv 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 167 THNTLGSLNILllTLTAQELSNSWANnLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRL 246
Cdd:PRK05846 188 YYNATGTFDIA--DLLNLPLPPGVQY-WLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 247 TLILNPLTKHMAYPFL-VLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSL 325
Cdd:PRK05846 265 SLPLFPDASHEFAPIIiTLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 326 LFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTAL 405
Cdd:PRK05846 345 LFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAV 424
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 292606418 406 YSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIIT 455
Cdd:PRK05846 425 YSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLL 474
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
91-456 |
3.74e-69 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 227.52 E-value: 3.74e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNqPERLNAGTYFLFYTLVGSLPLLIALIYTHnT 170
Cdd:TIGR01972 104 RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG-PNRIYAAMKFFLYTLAGSLLMLLAILGLY-F 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 171 LGSLNILLLTLTAQELSnSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLIL 250
Cdd:TIGR01972 182 LGGGTFDLLELLNLPLP-FGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 251 NP-LTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCL 329
Cdd:TIGR01972 261 FPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 330 ANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLY 409
Cdd:TIGR01972 341 VGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLT 420
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 292606418 410 MFTTTQWGSLT-HHINNMKPSFTRENTLMFMHLSPILLLSLNPDIITG 456
Cdd:TIGR01972 421 LYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLD 468
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.54e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 220.26 E-value: 1.54e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 112 ATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWA 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 192 NNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 272 TSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANS-NYERTHSRIMILSQGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 292606418 351 LLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
93-455 |
1.85e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 207.60 E-value: 1.85e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 93 KLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLG 172
Cdd:MTH00217 109 KEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 173 SLNilLLTLTAQELSNSWaNNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP 252
Cdd:MTH00217 189 TTD--YQALCCLKIEKEL-QYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 253 LTKHMAYPF-LVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLAN 331
Cdd:MTH00217 266 EASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVT 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 332 SNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMF 411
Cdd:MTH00217 346 FLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 292606418 412 TTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDIIT 455
Cdd:MTH00217 426 NRVCFGAPSKYLYFSRDLNRREFYVLLPLVFLIYLMGIFPFIII 469
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
93-454 |
1.03e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 197.59 E-value: 1.03e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 93 KLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLG 172
Cdd:MTH00204 112 KEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 173 SLNILLLTLTAQELS-NSWAnnlmWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILN 251
Cdd:MTH00204 192 TTDYQILLNIKLPLSiQKWL----LVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 252 PLTKHMAYPFLV-LSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLA 330
Cdd:MTH00204 268 PAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAV 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 331 NSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYM 410
Cdd:MTH00204 348 TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 292606418 411 FTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNPDII 454
Cdd:MTH00204 428 YNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFII 471
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
93-418 |
1.78e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 192.06 E-value: 1.78e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 93 KLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLG 172
Cdd:MTH00226 131 KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHG 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 173 SLNILLLTLTAQELSNSwANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNP 252
Cdd:MTH00226 211 TTDYLTLASCSHVVSEQ-TQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILP 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 253 L-TKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLAN 331
Cdd:MTH00226 290 LgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVT 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 332 SNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMF 411
Cdd:MTH00226 370 ILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFA 449
|
....*..
gi 292606418 412 TTTQWGS 418
Cdd:MTH00226 450 NRVTFGA 456
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-412 |
1.08e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 166.24 E-value: 1.08e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 94 LYLSMLISLQIslIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYthntlgs 173
Cdd:MTH00094 65 LILSNLLILIC--LLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 174 lNILLLTLTAQELSNSWannLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRltlILNPL 253
Cdd:MTH00094 136 -NFFFFSLCYFDFFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 254 TKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSN 333
Cdd:MTH00094 209 NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEF 288
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 292606418 334 YERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFT 412
Cdd:MTH00094 289 YHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
91-455 |
5.85e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 155.57 E-value: 5.85e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQpERLNAGTYFLFYTLVGSLPLLIALIYTHNT 170
Cdd:PRK12561 85 KPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALS 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 171 LGSLNILLLTLTAQELSNSWANnLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLIL 250
Cdd:PRK12561 164 GDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQM 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 251 NPLTKHMAYPFL-VLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCL 329
Cdd:PRK12561 243 LPDAHVYFAPALaILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFL 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 330 ANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVL-------VTTFSWSNITLLLTGLNMLV 402
Cdd:PRK12561 323 TGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFlgitssdVYSSTFRTITILLAAVGLIL 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 292606418 403 TALYSLYM----FTTTQWGSLTHH--INNMKPsftRENTLMFMHLSPILLLSLNPDIIT 455
Cdd:PRK12561 403 TPIYLLSMlrrvFYGPRSELLPALavVEDAKP---RELFIALSLLVPIIGIGFYPKLAT 458
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
91-415 |
1.47e-41 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 152.99 E-value: 1.47e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITrWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNT 170
Cdd:COG0651 105 RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 171 LGSLNILLLTLTAQELSNSWANnLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLIL 250
Cdd:COG0651 184 TGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 251 NP--LTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFC 328
Cdd:COG0651 263 FGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 329 LANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFS----WSNITLLLTGlnmLVTA 404
Cdd:COG0651 343 AAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEagawLLAAVLLLSS---LLTL 419
|
330
....*....|.
gi 292606418 405 LYSLYMFTTTQ 415
Cdd:COG0651 420 AYFVRIFGRAQ 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
85-451 |
2.16e-39 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 148.31 E-value: 2.16e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 85 SNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQpERLNAGTYFLFYTLVGSLPLLIAL 164
Cdd:PRK06473 99 SDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSF 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 165 IYTHNTLGSLNILLLTLTAQELSNSwANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 244
Cdd:PRK06473 178 LGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 245 RLTLILNPLTKHMAYPFL-VLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTS 323
Cdd:PRK06473 257 RFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLIS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 324 SLLFCLANSNYERTHSRIMILSQGL---QTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNM 400
Cdd:PRK06473 337 ALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGT 416
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 292606418 401 LVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNP 451
Cdd:PRK06473 417 GLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLIVVLGIQP 467
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
91-455 |
2.41e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 134.83 E-value: 2.41e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQpERLNAGTYFLFYTLVGSLPLLIALIYTHNT 170
Cdd:PRK02546 113 KPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFY 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 171 LGSLNILLLTLTAQELSNSWaNNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLIL 250
Cdd:PRK02546 192 GDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGM 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 251 NPLTKHMAYPFL-VLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCL 329
Cdd:PRK02546 271 LPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFL 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 330 ANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVT-------TFSWSNITLLLTGLNMLV 402
Cdd:PRK02546 351 VGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGfatsdayTLPFRVVVVFLAAVGVIL 430
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 403 TALYSLYMFTTTQWG----SLTHHiNNMKPSFTRENTLMFMHLSPILLLSLNPDIIT 455
Cdd:PRK02546 431 TPIYLLSMLREIFFGpenkELVSH-EKLVDAEPREVFIIACLLVPIIGIGLYPKLVT 486
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
85-451 |
3.84e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 125.21 E-value: 3.84e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 85 SNEPLSRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQpERLNAGTYFLFYTLVGSLPLLIAL 164
Cdd:PRK07363 99 IGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAF 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 165 IYTHNTLGSLNILLLTLTAQELSNSwANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 244
Cdd:PRK07363 178 LGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 245 RLTLILNPLTKHMAYPflVLSLWGMIMT---SSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGL 321
Cdd:PRK07363 257 RFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 322 TSSLLFCLANSNYERTHSRIMILSQGLQTL---LPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGL 398
Cdd:PRK07363 335 ILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIV 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 292606418 399 NMLVTALYSLYMFTTTQWGSLTHHINNMKPSFTRENTLMFMHLSPILLLSLNP 451
Cdd:PRK07363 415 ASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQP 467
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
95-459 |
6.79e-31 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 124.67 E-value: 6.79e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 95 YLSMLI--SLQISLimtFTATELIMFYIFFETTLIPTLAIITRWGNQpERLNAGTYFLFYTLVGSLPLLIALIythnTLG 172
Cdd:CHL00011 115 YFLMLAmySGQIGL---FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 173 SLNILLLTLTAQELSN-SWANNLMWLAYT---MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTL 248
Cdd:CHL00011 187 LYGSNEPTLNFETLANqSYPVALEILFYIgflIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 249 ILNPLTKHMAYPFLVL-SLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLF 327
Cdd:CHL00011 267 ELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALF 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 328 CLANSNYERThsRIMILSQ--GLQTLLPLMAFWWLLASLANLALPPTINLLGELSV---LVTTFSWS----NITLLLTGL 398
Cdd:CHL00011 347 FLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLlmpkILITFVMAI 424
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 292606418 399 NMLVTALYSLYMFTTTQWGSLTHHINNMK--PSFTRENTLMFMHLSPILLLSLNPDIITGFSS 459
Cdd:CHL00011 425 GMILTPIYLLSMLRQMFYGYKLFNVPNSYffDSGPRELFISICILLPVIGIGIYPDFVLSLSV 487
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-417 |
2.69e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 102.26 E-value: 2.69e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 108 MTFTATeLIMFYIFFETTLIPTLAIITRWGNqPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTltAQELS 187
Cdd:PRK08375 122 ALLTAD-LFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA--GALAE 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 188 NSWANNLMWLAYTmAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTL----ILNPLTKHMAYPFLV 263
Cdd:PRK08375 198 NPTVVTAFGFVLL-ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 264 LSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMI 343
Cdd:PRK08375 277 LALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLS 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 344 LSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFS---WSNITLLLTGlnMLVTALYSLYMFTTTQWG 417
Cdd:PRK08375 357 ELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEagqWLVLAVLLAS--SLLALLYFLRIWYRAFFG 431
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-371 |
1.08e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 97.73 E-value: 1.08e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 95 YLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSL 174
Cdd:PRK12667 115 YYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 175 NILLLTLTAQELSNS----------WANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMM 244
Cdd:PRK12667 195 NMADLSAKIRGLSFPltgglagnppLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAII 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 245 RL-------TLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMI 317
Cdd:PRK12667 275 RFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHII 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 292606418 318 AHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPP 371
Cdd:PRK12667 355 NHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
192-405 |
7.13e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 85.75 E-value: 7.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 192 NNLMWLAYTMA---FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYP--FLVLSL 266
Cdd:PRK06458 210 PTLMKLAFVFLligFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGrlLLIFGL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 267 WGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQ 346
Cdd:PRK06458 290 LSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIR 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 292606418 347 GLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFS---WSNITLLLTGLNMLVTAL 405
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
89-395 |
1.21e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 81.51 E-value: 1.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 89 LSRKKLYLSMlislqISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTH 168
Cdd:MTH00062 72 VSRFFLFLSL-----IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 169 NTLGSLNILLLTltaqelSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTL 248
Cdd:MTH00062 147 LVNGSFNFSDWG------SDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 249 ILNPLTkHMAYPFLVLSLWGMIMTSSicLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFC 328
Cdd:MTH00062 221 FIFSGS-FLGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFL 297
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 329 LANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLL 395
Cdd:MTH00062 298 LLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
90-327 |
1.54e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 78.88 E-value: 1.54e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 90 SRKKLYLSMLISLQIS-LIMTFTATELIMFYIFFETTLIPTLAIITRwGNQPERLNAGTYFLFyTLVGSLPLLIALIYTH 168
Cdd:PRK08668 94 TKNDAYFNMFALMSLAgVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 169 NTLGSLNIlllTLTAQELSNSWANNLMWLAY---TMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMr 245
Cdd:PRK08668 172 AKTGTFDF---ADISQGLINDTSTGFALIVFlflLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL- 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 246 LTLILNPLTK------------HMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAV 313
Cdd:PRK08668 248 LVLYVLPGTKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGL 327
|
250
....*....|....
gi 292606418 314 ILMIAHGLTSSLLF 327
Cdd:PRK08668 328 FHVFNHALFKGLFF 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-339 |
2.51e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 77.68 E-value: 2.51e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 90 SRKKLYLSM-LISLQISLIMTFTATELIMFYIFFETTLIPTLAIITrWGNQPERLNAGTYFLFYTLVGSLPLLI--ALIY 166
Cdd:PRK07234 90 SAKTRFFYAqLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIgaVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 167 THNTlgslnilllTLTAQELSNSWANNLMWLAytMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRL 246
Cdd:PRK07234 169 QANG---------TFAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 247 TLILNPLtkhmAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIqtpwsftgAVILMIAHGLTSSLL 326
Cdd:PRK07234 238 ALDVPGL----DLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTL 305
|
250
....*....|...
gi 292606418 327 FCLANSNYERTHS 339
Cdd:PRK07234 306 FLCAGALPSRNFT 318
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
102-327 |
2.76e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 77.87 E-value: 2.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 102 LQISLIMTFTATELIMFYIFFE-TTLIPTLAIITRwgNQPERLNAGTYFLFYTLVGSLPLLIALIY----THNTL--GSL 174
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAMIFAFIGLIFlfslTRQALgtGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 175 NILLLTLTAQELSNSWANnLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPlT 254
Cdd:PRK08676 189 NWTELAAHASLLSPSVLG-ASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQ-S 266
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 292606418 255 KHMAYPFLVLSLWGMIMTSSIC---LRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLF 327
Cdd:PRK08676 267 GAAEQFSNVLIGLGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-327 |
5.69e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.93 E-value: 5.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 108 MTFTATELIMFYIFFETTLIPTLAIITRwGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELS 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 188 nSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPlTKHMAYPFLVLSLW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 268 GMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLF 327
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-408 |
2.21e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 75.54 E-value: 2.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQI-SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHN 169
Cdd:PRK08667 108 ERANLLSALTALFIlSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFI 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 170 TLGSLNILLLTLTAQELSnswannLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRltLI 249
Cdd:PRK08667 188 QTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 250 LNPLTKHMAYPFLVLSLwGMI---MTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTG-----------AVIL 315
Cdd:PRK08667 260 MDVLSPELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFH 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 316 MIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTF-SWSNITLL 394
Cdd:PRK08667 339 SLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqSFSVADPL 418
|
330
....*....|....
gi 292606418 395 LTGLNMLVTALYSL 408
Cdd:PRK08667 419 IKILLFSVLAIFAL 432
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
7.55e-14 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 67.55 E-value: 7.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 1 MLKLIVPTIMLLPLTWLSKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSC-SPTFSSDPLTTPLLMLTTWLLPLTIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNlSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 292606418 80 SQRHLSNEPLSRKKLYLSMLISLQISLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
112-330 |
2.52e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 72.38 E-value: 2.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 112 ATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTyfLFYTLVGSLPLLIALIYTHNTLGSLNillltLTAQELSNSWA 191
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTS-----LSGILHSDVWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 192 NNLMWLAYT-----MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTlilnPLTKHMAYPFLVLSL 266
Cdd:PRK12650 202 EKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS----PVFHDVAVWNWLLII 277
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 267 WGM---IMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLA 330
Cdd:PRK12650 278 VGMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-432 |
5.17e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 70.75 E-value: 5.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 110 FTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFyTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELS-- 187
Cdd:PRK07691 125 FLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSag 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 188 NSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR-LTLILNPLTKHMAYPFLVLSL 266
Cdd:PRK07691 204 QTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARtFTLFFSHDTSFTHYLILILAL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 267 WGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQ 346
Cdd:PRK07691 284 LTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMG 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 347 GLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFS----WSNITLLLTGLnmLVtaLYS-LYMFTTTQWGSLTH 421
Cdd:PRK07691 364 GLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSL--LV--LYSvIKIFLKGFWGEPKG 439
|
330
....*....|.
gi 292606418 422 HINNMKPSFTR 432
Cdd:PRK07691 440 YDLNNKVPVKK 450
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
83-449 |
5.33e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 70.77 E-value: 5.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 83 HLSNEPLSRKKLYLSMLISLQISLIMtftATELIMFYIFFETTLIPTLAIITRWGNqPERLNAGTYFLFYTLVGSLPLLI 162
Cdd:PRK06525 106 HPVHEGTGRYYAFLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 163 ALIYTHNTLGSLNILLLtltaQELSNSwANNLMWLAYTMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 241
Cdd:PRK06525 182 AAATLFLQTGTFALSAL----SGLHGS-LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVY 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 242 GMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQ---TPWSFTGAVILMIA 318
Cdd:PRK06525 256 IFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 319 HGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGL 398
Cdd:PRK06525 336 HAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPA 415
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 399 NMLVTA------LYSLYMFTTTQWGSLTHHINNMKPsftrENTLMFMHLSPILLLSL 449
Cdd:PRK06525 416 MVLLLIesvasfAWFLRWFGRVVFGEPSEAVADAAP----LPGSMKLVLIVLIVMSL 468
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-327 |
3.37e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 68.64 E-value: 3.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 115 LIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 195 MWLAYTMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRLTLILNpLTKHMAYPFLVLSLWGMIMTS 273
Cdd:COG1009 213 ILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAA 290
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 292606418 274 SICLRQTDLKSLIAYSSISHMALVVTAILIQtpwSFTGAVILMIAHGLTSSLLF 327
Cdd:COG1009 291 LIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLF 341
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
9-327 |
9.07e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 66.68 E-value: 9.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 9 IMLLPLTWLSKKHMIWINTTTHSLIISIIpLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNEP 88
Cdd:COG1007 20 LLLLDLFLPRRSRRLLAGLALLGLLLALA-LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 89 LSRKKLYLSMLISLqISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGT-YFLFYTLVGSLPLL-IALIY 166
Cdd:COG1007 99 LLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLY 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 167 thntlGSLNILLLTLTAQELSNSWANNLMWLAyTMAFMV-----KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGY 241
Cdd:COG1007 178 -----GATGSLNLAGIAAALAAGGANSPLLLL-GLVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAF 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 242 GM-MR-LTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAH 319
Cdd:COG1007 251 AAlLRlLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAY 330
|
....*...
gi 292606418 320 GLTSSLLF 327
Cdd:COG1007 331 LFMNLGAF 338
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
99-419 |
1.04e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 67.09 E-value: 1.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 99 LISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILL 178
Cdd:PRK12646 116 LTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 179 LTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRLTLILNpLTKHM 257
Cdd:PRK12646 196 ILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 258 AYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAI-----LIQTP---------WSFTGAVILMIAHGLTS 323
Cdd:PRK12646 274 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQqdaiasiyvFVLFAALFHLMNHAIFK 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 324 SLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGE---LSVLVTTFSWSNITLLLTGLNM 400
Cdd:PRK12646 354 CALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKemfLDALTQTGQLSQFSLISMIIIV 433
|
330 340
....*....|....*....|....*.
gi 292606418 401 LV-------TALYSLYMFTTTQWGSL 419
Cdd:PRK12646 434 FIgviasifTFTYALYMVKEVFWGKY 459
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-405 |
2.01e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 66.10 E-value: 2.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 115 LIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLtLTAQEL--SNSWAN 192
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL-LASGDVirEHPLYL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 193 NLMWLAYTMAFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRLtlilNPLTKHMAYPFLVLSLWG--- 268
Cdd:PRK12647 196 AILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARL----NPVLGGTPLWQTILPLFGglt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 269 MIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGL 348
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 349 QTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTAL 405
Cdd:PRK12647 350 RRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNAL 406
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
119-413 |
2.09e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 65.56 E-value: 2.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 119 YIFFETTLIPTLAIiTRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELsNSWANNLMWLA 198
Cdd:PRK08377 134 FVFMEITAITAYAL-TAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI-DPTVAQVGLAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 199 YTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLV--LSLWGMIMTSSIC 276
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLViiMATLTVFFAELSA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 277 LRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMA 356
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 357 FwwllaslanlalPPTINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTT 413
Cdd:PRK08377 372 L------------ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGAS 416
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
105-342 |
1.34e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 63.37 E-value: 1.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 105 SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNilLLTLTAQ 184
Cdd:PRK06521 125 SMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYD--FAAMRAA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 185 ELSNSWANNLMWLAYtMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTL-ILNPLTKHMAYPFLV 263
Cdd:PRK06521 203 HLSPFWASLVFLLAL-FGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLA 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 264 LSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAI---LI--------QTPWSFTGAVILMIAHGLTSSLLFCLANS 332
Cdd:PRK06521 282 LGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGA 361
|
250
....*....|
gi 292606418 333 NYERTHSRIM 342
Cdd:PRK06521 362 VLHATGTRDM 371
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-332 |
3.35e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.89 E-value: 3.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 119 YIFFETTLIPTLAIITrWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLA 198
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 199 YTMAFMVKMPLYGLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVL-SLWGMIMTSSICL 277
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATmAAITMVIGALGAL 291
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 292606418 278 RQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANS 332
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGS 346
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
3.62e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 61.67 E-value: 3.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 119 YIFFETTLIPTLaIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNLMWLA 198
Cdd:PRK12662 136 YVFLEISSISSY-VLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 199 YTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR---------LTLILNPLTKhmayPFLVLSLWGM 269
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvfkanFVFTTLPFNN----VFMILAALAI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 270 IMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQ 349
Cdd:PRK12662 291 VFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLW 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 292606418 350 TLLPLMAFWWLLASLANLALPPTINLLGE---LSVLVTTFSWSNITLLLTG 397
Cdd:PRK12662 371 KSMPKITLAFVLLSLSLIGMPPTSGFVAKwyiLDAFIKSNAWIGLVVLLVG 421
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-371 |
6.88e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.88 E-value: 6.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 95 YLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSL 174
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 175 NILLLTLTAQElsNSWANNLMWLA-YTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRLTLILNP 252
Cdd:PRK08376 203 NMAYLAVKMSE--NPTVVAKIALAlFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYG 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 253 LTKHMAYPFLVLSLWG---MIMTSSICLRQTDLKSLIAYSSISH---------MALVVTAILIQTPWSFT---GAVILMI 317
Cdd:PRK08376 279 PAINLATVGWVIIILGcltMFVGVAMAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIV 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 292606418 318 AHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPP 371
Cdd:PRK08376 359 NHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-398 |
8.65e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.00 E-value: 8.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 155 VGSLPLLIALIYTHNTLGSLNILLLTLTAQELSnswANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 235 LLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALV-------VTAILIQTP- 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPa 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 307 ---WSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLV 383
Cdd:PRK08042 302 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
250
....*....|....*
gi 292606418 384 TTFSWSNITLLLTGL 398
Cdd:PRK08042 382 SFFKLSNSGAFVARL 396
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
87-299 |
8.91e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 61.00 E-value: 8.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 87 EPLSRKKLYLSMLISLQISliMTFTATELIMFyIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIY 166
Cdd:PRK12649 108 EDLPRYYQYLLLFMGSMIG--MVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 167 THNTLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFM---VKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYG 242
Cdd:PRK12649 185 LHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYL 263
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 243 MMRltliLNPLTKHMAYPFLVLSLWGMI---MTSSICLRQTDLKSLIAYSSISHMALVVT 299
Cdd:PRK12649 264 VAR----IHPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMT 319
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-393 |
1.40e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 56.75 E-value: 1.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 90 SRKKLYLSMLISLQISLIMTftaTELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHN 169
Cdd:PRK06589 116 SRFLFFFNLTILIGVLIALS---SDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 170 TLGSLNILLLTLTAQELSNSWANNLMWLaytmafMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLI 249
Cdd:PRK06589 193 KTGNLDFVSGGLFSKNQSIILLLMFIYG------IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLY 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 250 LNPLTK-----HMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSS 324
Cdd:PRK06589 267 IFGLSYlqrifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKI 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 292606418 325 LLFCLANSNYERTHSRIMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSNITL 393
Cdd:PRK06589 347 CLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWL 415
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
112-327 |
4.49e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 55.29 E-value: 4.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 112 ATELIMFYIFFETTLIPTLAIItrWGN-QPERLNAG-TYFLFYTLVGSLpLLIALIYTHNTLGSLNILLLTLTAQELSns 189
Cdd:PRK12668 112 AGDLLTLFVFWELMAFTSTFLV--WARgTKAAVRAGfRYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGTAA-- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 190 wannlmWLAYTmAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRL---TLILnpltkhmAYPFLVLSL 266
Cdd:PRK12668 187 ------WLILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELL-------IYIGAAMAV 252
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 292606418 267 WGMIMTssicLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLF 327
Cdd:PRK12668 253 YGVFFA----LLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
18-386 |
5.82e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 54.95 E-value: 5.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 18 SKKHMIWINTTTHSLIISIIPLLFFNQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTIMASQRHLSNEPLSRKKLYLS 97
Cdd:TIGR01770 28 KRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFEFYIL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 98 MLISLqISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAG-TYFLFYTLVGSLPLL-IALIYTHNtlGSLN 175
Cdd:TIGR01770 108 LLFAL-LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGlKYFILGAFSSGLLLFgISLIYGFT--GSLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 176 ILLLTLTAQELSNSWANNLMWLAYTM-AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTL-ILNPL 253
Cdd:TIGR01770 185 FEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGF 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 254 TKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTS----SLLFCL 329
Cdd:TIGR01770 265 SEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLL 344
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 292606418 330 ANSNYERTHSriMILSQGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTF 386
Cdd:TIGR01770 345 RSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALL 399
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-330 |
4.21e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 52.16 E-value: 4.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 119 YIFFETTLIPTLAIITRwGNQPERLNAGTYFLFYTLVGSLPLLIA--LIYthNTLGSLNI-----LLLTLTAQELSNSWA 191
Cdd:PRK12666 135 FVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGvgLIY--GVTGTLNMadlaqRIAQLPAADRALLEA 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 192 NNLMWLaytMAFMVKMPLYGLHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRL-TLILNP---LTKHMAYPFLvls 265
Cdd:PRK12666 212 GAALLL---VVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPeagASAGFGQDWL--- 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 292606418 266 LWGMIMTSSI----CLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLA 330
Cdd:PRK12666 283 LPGGLATLAFgaigVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
94-323 |
2.32e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.82 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 94 LYLSMLISLqISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAG-TYFLFYTLVGSLPLL-IALIYthntl 171
Cdd:PRK05777 105 FYLLVLFAL-LGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAiKYFVLGALASGFLLYgMSLLY----- 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 172 GSLNILLLTLTAQELSNSWANNLMwLAYTMAFMV-----KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MR 245
Cdd:PRK05777 179 GATGSLSFAGIAKALADGSGNSLL-LLFGLVFLLvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLR 256
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 292606418 246 -LTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTS 323
Cdd:PRK05777 257 lLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
80-332 |
3.30e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.57 E-value: 3.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 80 SQRHLSNEP-LSRKKLYLSMLISLQISLImtfTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSL 158
Cdd:MTH00032 100 STSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDV 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 159 PLLIALIYTHNTLGSLNILLL---TLTAQELSNSWANNLMWLAYTMAFMV-----------KMPLYGLHLWLPKAHVEAP 224
Cdd:MTH00032 177 GVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGAYESPLAPFAIigillligcigKSAQLGLHTWLPDAMEGPT 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 225 IAGSMVLAAVLLKLGGYGMMRLTlilnPLTKHMAYPFLVLSLWGMI---MTSSICLRQTDLKSLIAYSSISHMALVVTAI 301
Cdd:MTH00032 257 PVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQNDLKKVIAYSTCSQLGYMVLII 332
|
250 260 270
....*....|....*....|....*....|.
gi 292606418 302 LIQTpwSFTGAVILMIAHGLTSSLLFCLANS 332
Cdd:MTH00032 333 GIEG--SHNVGLFHLVNHAFFKALLFLSAGS 361
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-357 |
7.02e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.02 E-value: 7.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 262 LVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRI 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90
....*....|....*.
gi 292606418 342 MILSQGLQTLLPLMAF 357
Cdd:PRK06277 350 LRKLGGLLPVMPVVAF 365
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
9.47e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.91 E-value: 9.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 111 TATELIMFYIFFE-TTLIPTLAIitrwGNQPERLN---AGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLtltaqeL 186
Cdd:PRK12644 124 TSDNLLLLYVFWElTTVLSFLLI----GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL------L 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 187 SNSWANNLMWLAYTMAF---MVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRLTlilnPLTKHMA---Y 259
Cdd:PRK12644 194 ADPPTGPAVSVAVVLILvgaLSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVPvwrP 268
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 292606418 260 PFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLF 327
Cdd:PRK12644 269 TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
10-301 |
1.12e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 44.56 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 10 MLLPLTWLSKKHMIWINTtthSLIISIIPLLFF------------NQINNNLFSCSPTFSSDPLTTPLLMLTTWLLPLTI 77
Cdd:MTH00211 20 LLLPLNNSKLHIKKAVKL---SFFISLIPLLIFldqgletiltnwSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 78 MASQRHLSNEPlsRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGS 157
Cdd:MTH00211 97 EFSLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGD 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 158 LPLLIALIYTHNTLGSLNILlltltaQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MV 230
Cdd:MTH00211 175 IGLLLSMVWLLLNLNSWEIS------QLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMV 247
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 292606418 231 LAAVLLklggygMMRLTLILNPLTKHMAYPFLVLSLwGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAI 301
Cdd:MTH00211 248 VAGVFL------LIRLSPLFQNNQLILGAVLLLGAL-TMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-344 |
1.14e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 44.39 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 90 SRKKLYLSMLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRwGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHN 169
Cdd:PRK06591 112 NRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIAS-GNNPKSLIGAFDYLIMGSIGATLILIAIGFLLS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 170 TLGSLNILLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLT-L 248
Cdd:PRK06591 191 ITGSLNMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTyI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 249 ILNPLTKHMAYPFLV--LSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVtaILIQTPWSFTGAVILMIAHGLTSSLL 326
Cdd:PRK06591 271 IIGYETIKTAITNFIrpIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVF--LLYVTENGIIILPSLLLADSINKIAL 348
|
250 260
....*....|....*....|
gi 292606418 327 FCLA--NSNYERTHSRIMIL 344
Cdd:PRK06591 349 FLIDayNESYKREPNKVLII 368
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
91-338 |
2.06e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 91 RKKLYLSMLISLQI-SLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPErlnAGTYFLFYTLVGSLPLLIALIYTHN 169
Cdd:PRK06459 69 HYGKWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 170 TLGSLNILLLTltaqelsnswaNNLMWLAYTMAFMVKMPLYGLHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLT 247
Cdd:PRK06459 146 ISGTTNFSYLP-----------SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 248 LILNPL-TKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHM--------ALVVTAILIQTPWSFTGAVILM-- 316
Cdd:PRK06459 215 ILTQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNgailvalgLYMVTKQLITSIEHFSLITVILys 294
|
250 260
....*....|....*....|..
gi 292606418 317 IAHGLTSSLLFCLANSNYERTH 338
Cdd:PRK06459 295 FAHSVAKTGLFLSSGLQEKQSI 316
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
115-299 |
4.88e-04 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 42.60 E-value: 4.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 115 LIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSLNILLLTLTAQELSNSWANNL 194
Cdd:PRK12645 132 LIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSPLFIP 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 195 MWLAYTMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRLTlilnPLTKHMAYPFLVLSLWGMIM-- 271
Cdd:PRK12645 212 AMILILLGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITlf 286
|
170 180
....*....|....*....|....*....
gi 292606418 272 -TSSICLRQTDLKSLIAYSSISHMALVVT 299
Cdd:PRK12645 287 wGSLNAVKQTDLKGILAFSTVSQLGLIMS 315
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
189-409 |
5.96e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.80 E-value: 5.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 189 SWANNLMWLAYTM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRLTLILNPltkhMAYPFLVLS 265
Cdd:MTH00144 77 MYNLSFSWFSMSLlllGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLYW----LAYLLCVIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 266 LWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQtpwSFTGAVILMIAHGLTSSLLFCLANSNYErthsriMILS 345
Cdd:MTH00144 152 VLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHG---SWLMWMYFLIYIVSSGFLFFSLWSGDSG------SMKD 222
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 292606418 346 QGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTFSWSnitLLLTGLNMLVTALYSLY 409
Cdd:MTH00144 223 LGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESS---PLLLILLLLLGSLISLF 283
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
95-300 |
1.80e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.78 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 95 YLSMLISLQISLIMTftaTELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSL 174
Cdd:PRK07376 127 YLSLFSSSMLGLVIS---PNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSF 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 175 NILLLTLTAQELSNSWANNLmWLAYTMAFMVKM-PL-----YGLHLWLPKAhVEAPI-------AGSMVLAAVLLklggy 241
Cdd:PRK07376 204 DFDGIADRLSELVSSGAVSG-WLALLLCILVFLgPMaksaqFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL----- 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 292606418 242 gMMRLtlilNPLTKHMAYPFLVLSLWGMI---MTSSICLRQTDLKSLIAYSSISHMALVVTA 300
Cdd:PRK07376 277 -VARM----YPVFEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMA 333
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-332 |
2.73e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.06 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 95 YLSMLISLQISLImtfTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIYTHNTLGSL 174
Cdd:MTH00020 116 YLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 175 NiLLLTLTAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygMMRLTl 248
Cdd:MTH00020 193 D-FSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------LIRSS- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 249 ilnPLTKHMAYPFLVLSLWGMI---MTSSICLRQTDLKSLIAYSSISHMALVVTAILIQtpwSFTGAVILMIAHGLTSSL 325
Cdd:MTH00020 265 ---PLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKAL 338
|
....*..
gi 292606418 326 LFCLANS 332
Cdd:MTH00020 339 LFLSAGS 345
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
104-384 |
6.72e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.47 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 104 ISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAG-TYFLFYTLVGSLPLL-IALIYTHNTLGSLNILLLTL 181
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 182 TAQELSNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAgSMVLAAVLLKLGGYGMmrLTLILNPLTKhmaypF 261
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLGIFSI--LVSIGLNVNI-----L 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 262 LVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSnYERTHSRI 341
Cdd:MTH00196 156 LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILA-LNVYKNLI 234
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 292606418 342 MILSqGLQTLLPLMAFWWLLASLANLALPPTINLLGELSVLVT 384
Cdd:MTH00196 235 IEFS-GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLS 276
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
187-307 |
7.41e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 38.80 E-value: 7.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 187 SNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMMRLTLILNPLTkhmAY 259
Cdd:MTH00208 230 SNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSP---WF 299
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 292606418 260 PFLVLSLWGM--IMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPW 307
Cdd:MTH00208 300 LSLCLILGSLtaLFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
98-450 |
7.82e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.41 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 98 MLISLQISLIMTFTATELIMFYIFFETTLIPTLAIITRWGNQPERLNAGTYFLFYTlVGSLPLLIALIYTHNTLGSLNIl 177
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQA-TASALLLFGGLLNAWTSGQWGI- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 178 lltltaqelsNSWANNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMmrLTLILNPLTKHM 257
Cdd:MTH00200 87 ----------SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPFAL--LIQLAPALNSNI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 258 aypFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQtpwSFTGAVILMIAHGLTSSLLFCLANSNYERT 337
Cdd:MTH00200 154 ---LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS---PNLALLYLLLYVIITLTVFLLLNLLNSTKI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292606418 338 HSRIMILsqglqTLLPLMAFWWLLASLANLALPPTINLLGELSVLVTTfswSNITLLLTGLNMLVTALYSLYMFTTTQWG 417
Cdd:MTH00200 228 NSLSSSK-----TKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL---SKQGLFIYATILLLGSLLSLFFYLRLSYL 299
|
330 340 350
....*....|....*....|....*....|...
gi 292606418 418 SLTHHINNMKPSFTRENTLMFMHLSPILLLSLN 450
Cdd:MTH00200 300 TLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLS 332
|
|
| |
