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Conserved domains on  [gi|290656975|ref|NP_001166114|]
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thymidine kinase 2 isoform 2 [Homo sapiens]

Protein Classification

deoxynucleoside kinase( domain architecture ID 10484182)

deoxynucleoside kinase catalyzes the phosphorylation of deoxyribonucleosides to yield the corresponding monophosphates

CATH:  3.40.50.300
EC:  2.7.1.-
Gene Ontology:  GO:0019136|GO:0005524
SCOP:  4004030

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
dNK pfam01712
Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2. ...
22-234 1.42e-82

Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyze the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.


:

Pssm-ID: 396326  Cd Length: 201  Bit Score: 244.92  E-value: 1.42e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   22 ICVEGNIASGKTTCLEFFSNATDVEVLTEPVSKWRNvrghNPLGLMYHDASRWGLTLQTYVQLTMLDRHTRP-QVSSVRL 100
Cdd:pfam01712   1 ISIEGNIGAGKSTLTKILSKRLGFKVFEEPVDRWTN----PYLDKFYKDPSRWSFALQTYFLNSRFKQQLEAfFTGQVVI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  101 MERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNMDvSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEA 180
Cdd:pfam01712  77 LERSIYSDRYIFAKMLYDKGTMSDEEYKTYKDLYDNMLLEFP-KPDLIIYLKTSPETCLERIKKRGRTEEQNISLDYLER 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 290656975  181 IHHLHEEWLIKGSLFpmaaPVLVIEADhhmERMLELFEQNRDRILTPENrKHCP 234
Cdd:pfam01712 156 LHEKYEAWLKKLNLS----PVLVIDGD---ELDFVFFEEDREDVMNEVN-EFVS 201
 
Name Accession Description Interval E-value
dNK pfam01712
Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2. ...
22-234 1.42e-82

Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyze the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.


Pssm-ID: 396326  Cd Length: 201  Bit Score: 244.92  E-value: 1.42e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   22 ICVEGNIASGKTTCLEFFSNATDVEVLTEPVSKWRNvrghNPLGLMYHDASRWGLTLQTYVQLTMLDRHTRP-QVSSVRL 100
Cdd:pfam01712   1 ISIEGNIGAGKSTLTKILSKRLGFKVFEEPVDRWTN----PYLDKFYKDPSRWSFALQTYFLNSRFKQQLEAfFTGQVVI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  101 MERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNMDvSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEA 180
Cdd:pfam01712  77 LERSIYSDRYIFAKMLYDKGTMSDEEYKTYKDLYDNMLLEFP-KPDLIIYLKTSPETCLERIKKRGRTEEQNISLDYLER 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 290656975  181 IHHLHEEWLIKGSLFpmaaPVLVIEADhhmERMLELFEQNRDRILTPENrKHCP 234
Cdd:pfam01712 156 LHEKYEAWLKKLNLS----PVLVIDGD---ELDFVFFEEDREDVMNEVN-EFVS 201
dNK cd01673
Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to ...
21-208 1.84e-67

Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.


Pssm-ID: 238836  Cd Length: 193  Bit Score: 206.31  E-value: 1.84e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  21 VICVEGNIASGKTTCLEFFSNATDVEVLTEPVSkwRNVRGHNPLGLMYHDASRWGLTLQTYVQLTMLDRHTRPQVSS--- 97
Cdd:cd01673    1 VIVVEGNIGAGKSTLAKELAEHLGYEVVPEPVE--PDVEGNPFLEKFYEDPKRWAFPFQLYFLLSRLKQYKDALEHLstg 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  98 -VRLMERSIHSARYIFVENLYRSGKMPeVDYVVLSEWFDWILRNmDVSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLE 176
Cdd:cd01673   79 qGVILERSIFSDRVFAEANLKEGGIMK-TEYDLYNELFDNLIPE-LLPPDLVIYLDASPETCLKRIKKRGRPEEQGIPLD 156
                        170       180       190
                 ....*....|....*....|....*....|..
gi 290656975 177 YLEAIHHLHEEWLIKgsLFPMAAPVLVIEADH 208
Cdd:cd01673  157 YLEDLHEAYEKWFLP--QMYEKAPVLIIDANE 186
Dck COG1428
Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];
17-208 1.95e-39

Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];


Pssm-ID: 441037 [Multi-domain]  Cd Length: 205  Bit Score: 134.91  E-value: 1.95e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  17 EKKSVICVEGNIASGKTTCLEFFSNATDVEVLTEPVSkwrnvrgHNP-LGLMYHDASRWGLTLQTY------VQLTMLDR 89
Cdd:COG1428    1 MKPRYIAVEGNIGAGKTTLARLLAEHLGAELLLEPVE-------DNPfLEDFYEDPKRWAFPLQLFfllsrfKQLKDLRQ 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  90 HTRPQVSsvrlmERSIHSARyIFVENLYRSGKMPEVDYVVLSEWFDWILRNMdVSVDLIVYLRTNPETCYQRLKKRCREE 169
Cdd:COG1428   74 FGGNVVS-----DRSIYKDA-IFAKLLHEMGTLSDREFDLYRQLFDNLTEDL-PKPDLVIYLQASVDTLLERIKKRGRDY 146
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 290656975 170 EKVIPLEYLEAIHHLHEEWLIKgslFPmAAPVLVIEADH 208
Cdd:COG1428  147 EQNIDLDYLERLNEAYEEWFEH---YD-ASPVLIIDTDE 181
PHA03132 PHA03132
thymidine kinase; Provisional
25-182 2.33e-07

thymidine kinase; Provisional


Pssm-ID: 222997 [Multi-domain]  Cd Length: 580  Bit Score: 50.92  E-value: 2.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  25 EGNIASGKTTCLEFFSNATDVEVLT--EPVSKWRNVRgHNPLGLMYHDASRWG---------------------LTLQTY 81
Cdd:PHA03132 263 EGVMGVGKTTLLNHMRGILGDNVLVfpEPMRYWTEVY-SNCLKEIYKLVKPGKhgktstsakllacqmkfatpfRALATR 341
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  82 VQLTMLDRHTRPQVSSVR---LMERSIHSARYIFVENLYRSGkmpevdyvVLS-EWFDWILRNMDVSV-DLIVYLRTNPE 156
Cdd:PHA03132 342 TRRLVQPESVRRPVAPLDnwvLFDRHLLSATVVFPLMHLRNG--------MLSfSHFIQLLSTFRAHEgDVIVLLKLNSE 413
                        170       180
                 ....*....|....*....|....*.
gi 290656975 157 TCYQRLKKRCREEEKVIPLEYLEAIH 182
Cdd:PHA03132 414 ENLRRVKKRGRKEEKGINLTYLKELN 439
DTMP_kinase TIGR00041
dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage ...
22-207 3.29e-03

dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 161676  Cd Length: 195  Bit Score: 37.34  E-value: 3.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   22 ICVEGNIASGKTTCLEFF-----SNATDVEVLTEPvskwrnvrGHNPLG-------LMYHDASrwgLTLQTYVQLTMLDR 89
Cdd:TIGR00041   6 IVIEGIDGAGKTTQANLLkkllqENGYDVLFTREP--------GGTPIGekirellLNENDEP---LTDKAEALLFAADR 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   90 --HTRPQVSSVRLMERSIHSARYIFVENLYRSGKmPEVDYVVLSEWFDWILRNMDvsvDLIVYLRTNPETCYQRLKKrcR 167
Cdd:TIGR00041  75 heHLEDKIKPALAEGKLVISDRYVFSSIAYQGGA-RGIDEDLVLELNEDALGDMP---DLTIYLDIDPEVALERLRK--R 148
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 290656975  168 EEEKVIPLEYLEAIHHLHEEWLikgSLFPMAAPVLVIEAD 207
Cdd:TIGR00041 149 GELDREEFEKLDFFEKVRQRYL---ELADKEKSIHVIDAT 185
 
Name Accession Description Interval E-value
dNK pfam01712
Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2. ...
22-234 1.42e-82

Deoxynucleoside kinase; This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyze the production of deoxynucleotide 5'-monophosphate from a deoxynucleoside. Using ATP and yielding ADP in the process.


Pssm-ID: 396326  Cd Length: 201  Bit Score: 244.92  E-value: 1.42e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   22 ICVEGNIASGKTTCLEFFSNATDVEVLTEPVSKWRNvrghNPLGLMYHDASRWGLTLQTYVQLTMLDRHTRP-QVSSVRL 100
Cdd:pfam01712   1 ISIEGNIGAGKSTLTKILSKRLGFKVFEEPVDRWTN----PYLDKFYKDPSRWSFALQTYFLNSRFKQQLEAfFTGQVVI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  101 MERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNMDvSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLEYLEA 180
Cdd:pfam01712  77 LERSIYSDRYIFAKMLYDKGTMSDEEYKTYKDLYDNMLLEFP-KPDLIIYLKTSPETCLERIKKRGRTEEQNISLDYLER 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 290656975  181 IHHLHEEWLIKGSLFpmaaPVLVIEADhhmERMLELFEQNRDRILTPENrKHCP 234
Cdd:pfam01712 156 LHEKYEAWLKKLNLS----PVLVIDGD---ELDFVFFEEDREDVMNEVN-EFVS 201
dNK cd01673
Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to ...
21-208 1.84e-67

Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.


Pssm-ID: 238836  Cd Length: 193  Bit Score: 206.31  E-value: 1.84e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  21 VICVEGNIASGKTTCLEFFSNATDVEVLTEPVSkwRNVRGHNPLGLMYHDASRWGLTLQTYVQLTMLDRHTRPQVSS--- 97
Cdd:cd01673    1 VIVVEGNIGAGKSTLAKELAEHLGYEVVPEPVE--PDVEGNPFLEKFYEDPKRWAFPFQLYFLLSRLKQYKDALEHLstg 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  98 -VRLMERSIHSARYIFVENLYRSGKMPeVDYVVLSEWFDWILRNmDVSVDLIVYLRTNPETCYQRLKKRCREEEKVIPLE 176
Cdd:cd01673   79 qGVILERSIFSDRVFAEANLKEGGIMK-TEYDLYNELFDNLIPE-LLPPDLVIYLDASPETCLKRIKKRGRPEEQGIPLD 156
                        170       180       190
                 ....*....|....*....|....*....|..
gi 290656975 177 YLEAIHHLHEEWLIKgsLFPMAAPVLVIEADH 208
Cdd:cd01673  157 YLEDLHEAYEKWFLP--QMYEKAPVLIIDANE 186
Dck COG1428
Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];
17-208 1.95e-39

Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];


Pssm-ID: 441037 [Multi-domain]  Cd Length: 205  Bit Score: 134.91  E-value: 1.95e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  17 EKKSVICVEGNIASGKTTCLEFFSNATDVEVLTEPVSkwrnvrgHNP-LGLMYHDASRWGLTLQTY------VQLTMLDR 89
Cdd:COG1428    1 MKPRYIAVEGNIGAGKTTLARLLAEHLGAELLLEPVE-------DNPfLEDFYEDPKRWAFPLQLFfllsrfKQLKDLRQ 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  90 HTRPQVSsvrlmERSIHSARyIFVENLYRSGKMPEVDYVVLSEWFDWILRNMdVSVDLIVYLRTNPETCYQRLKKRCREE 169
Cdd:COG1428   74 FGGNVVS-----DRSIYKDA-IFAKLLHEMGTLSDREFDLYRQLFDNLTEDL-PKPDLVIYLQASVDTLLERIKKRGRDY 146
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 290656975 170 EKVIPLEYLEAIHHLHEEWLIKgslFPmAAPVLVIEADH 208
Cdd:COG1428  147 EQNIDLDYLERLNEAYEEWFEH---YD-ASPVLIIDTDE 181
PHA03132 PHA03132
thymidine kinase; Provisional
25-182 2.33e-07

thymidine kinase; Provisional


Pssm-ID: 222997 [Multi-domain]  Cd Length: 580  Bit Score: 50.92  E-value: 2.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  25 EGNIASGKTTCLEFFSNATDVEVLT--EPVSKWRNVRgHNPLGLMYHDASRWG---------------------LTLQTY 81
Cdd:PHA03132 263 EGVMGVGKTTLLNHMRGILGDNVLVfpEPMRYWTEVY-SNCLKEIYKLVKPGKhgktstsakllacqmkfatpfRALATR 341
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  82 VQLTMLDRHTRPQVSSVR---LMERSIHSARYIFVENLYRSGkmpevdyvVLS-EWFDWILRNMDVSV-DLIVYLRTNPE 156
Cdd:PHA03132 342 TRRLVQPESVRRPVAPLDnwvLFDRHLLSATVVFPLMHLRNG--------MLSfSHFIQLLSTFRAHEgDVIVLLKLNSE 413
                        170       180
                 ....*....|....*....|....*.
gi 290656975 157 TCYQRLKKRCREEEKVIPLEYLEAIH 182
Cdd:PHA03132 414 ENLRRVKKRGRKEEKGINLTYLKELN 439
NDUO42 cd02030
NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar ...
21-196 4.66e-05

NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.


Pssm-ID: 238988  Cd Length: 219  Bit Score: 43.11  E-value: 4.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  21 VICVEGNIASGKTTC---------LEFFSNAT--DVEVLTEPVSKWRNVRGHNP-LGLMYHDASRWG---LTLQTYVQLT 85
Cdd:cd02030    1 VITVDGNIASGKGKLakelaeklgMKYFPEAGihYLDSTTGDGKPLDPAFNGNCsLEKFYDDPKSNDgnsYRLQSWMYSS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975  86 MLDR------HTRPQVSSVRLmERSIHSaRYIFVENLYRSGKMP--------EVDYVVLSEWFdwilrnmdvSVDLIVYL 151
Cdd:cd02030   81 RLLQysdaleHLLSTGQGVVL-ERSPFS-DFVFLEAMYKQGYIRkqcvdhynEVKGNTIPELL---------PPHLVIYL 149
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 290656975 152 RTNPETCYQRLKKRCREEEKVIPLEYLEAIhhlheEWLIKGSLFP 196
Cdd:cd02030  150 DVPVPEVQKRIKKRGDPHEMKVTSAYLQDI-----ENAYKKTFLP 189
Fap7 COG1936
Broad-specificity NMP kinase [Nucleotide transport and metabolism];
103-180 4.23e-04

Broad-specificity NMP kinase [Nucleotide transport and metabolism];


Pssm-ID: 441539 [Multi-domain]  Cd Length: 173  Bit Score: 39.80  E-value: 4.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975 103 RSIHSARYIFVENLYrSGKMPEVDYVV--LSEWFDWILRNMD------------VSVDLIVYLRTNPETCYQRLKKRCRE 168
Cdd:COG1936   27 EVIHLNDLVKEEGLY-TEVDEERDSLVvdEDALAEELEELKEgdviieghlahlVDVDRVIVLRCNPEVLEERLEERGYS 105
                         90
                 ....*....|..
gi 290656975 169 EEKVipLEYLEA 180
Cdd:COG1936  106 EEKI--RENVEA 115
DTMP_kinase TIGR00041
dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage ...
22-207 3.29e-03

dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 161676  Cd Length: 195  Bit Score: 37.34  E-value: 3.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   22 ICVEGNIASGKTTCLEFF-----SNATDVEVLTEPvskwrnvrGHNPLG-------LMYHDASrwgLTLQTYVQLTMLDR 89
Cdd:TIGR00041   6 IVIEGIDGAGKTTQANLLkkllqENGYDVLFTREP--------GGTPIGekirellLNENDEP---LTDKAEALLFAADR 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 290656975   90 --HTRPQVSSVRLMERSIHSARYIFVENLYRSGKmPEVDYVVLSEWFDWILRNMDvsvDLIVYLRTNPETCYQRLKKrcR 167
Cdd:TIGR00041  75 heHLEDKIKPALAEGKLVISDRYVFSSIAYQGGA-RGIDEDLVLELNEDALGDMP---DLTIYLDIDPEVALERLRK--R 148
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 290656975  168 EEEKVIPLEYLEAIHHLHEEWLikgSLFPMAAPVLVIEAD 207
Cdd:TIGR00041 149 GELDREEFEKLDFFEKVRQRYL---ELADKEKSIHVIDAT 185
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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