|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-216 |
1.77e-154 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 432.79 E-value: 1.77e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNT 216
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
6.15e-93 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 270.39 E-value: 6.15e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 10 PLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 90 LFFMCIYLHIGRGIYYGSY--LYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 284177515 168 GFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
4.80e-84 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 247.30 E-value: 4.80e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 19 FIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 99 IGRGIYYG--SYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 284177515 177 TRFFTFHFLLPFTIMGLTVMHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-211 |
4.51e-82 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 249.32 E-value: 4.51e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 10 PLAKIINNsFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 90 LFFMCIYLHIGRGIYYGSylYKE----TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWI 165
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 284177515 166 WGGFSVDNATLTRFFTFH-FLLPFTIMGLTVMHLLFLHETGSNNPTG 211
Cdd:COG1290 176 FGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPG 222
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-216 |
1.77e-154 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 432.79 E-value: 1.77e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNT 216
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
3-216 |
3.43e-149 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 419.44 E-value: 3.43e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 3 TNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRN 82
Cdd:MTH00131 2 ASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 83 MHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLV 162
Cdd:MTH00131 82 LHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLV 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 284177515 163 QWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00131 162 QWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDA 215
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-216 |
1.77e-148 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 417.89 E-value: 1.77e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 3 TNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRN 82
Cdd:MTH00100 2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 83 MHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLV 162
Cdd:MTH00100 82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 284177515 163 QWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00100 162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDS 215
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-216 |
4.38e-147 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 414.08 E-value: 4.38e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNP 216
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-216 |
3.44e-141 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 398.90 E-value: 3.44e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 5 LRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 85 ANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 284177515 165 IWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDS 212
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
13-215 |
3.49e-139 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 393.38 E-value: 3.49e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 13 KIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFF 92
Cdd:MTH00156 2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 93 MCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 172
Cdd:MTH00156 82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 284177515 173 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSN 215
Cdd:MTH00156 162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSN 204
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-216 |
1.86e-133 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 379.63 E-value: 1.86e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDG 216
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
5-215 |
3.14e-132 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 376.74 E-value: 3.14e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 5 LRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMH 84
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 85 ANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQW 164
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 284177515 165 IWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSN 215
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSN 214
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-216 |
1.36e-129 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 369.78 E-value: 1.36e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNS 216
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-216 |
6.97e-114 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 329.96 E-value: 6.97e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADS 216
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
5-215 |
4.70e-109 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 317.80 E-value: 4.70e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 5 LRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMH 84
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 85 ANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQW 164
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 284177515 165 IWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSN 215
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSS 213
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-215 |
1.07e-107 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 314.34 E-value: 1.07e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 1 MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLI 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 81 RNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNT 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 284177515 161 LVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSN 215
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSD 215
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
6.15e-93 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 270.39 E-value: 6.15e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 10 PLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 90 LFFMCIYLHIGRGIYYGSY--LYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 284177515 168 GFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-212 |
5.11e-85 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 256.79 E-value: 5.11e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 5 LRKTHPLAKIinNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMH 84
Cdd:MTH00033 3 LRKTGLLEPV--NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 85 ANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQW 164
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 284177515 165 IWGGFSVDNATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGL 212
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGL 208
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
4.80e-84 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 247.30 E-value: 4.80e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 19 FIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 99 IGRGIYYG--SYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 284177515 177 TRFFTFHFLLPFTIMGLTVMHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-211 |
4.51e-82 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 249.32 E-value: 4.51e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 10 PLAKIINNsFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGAS 89
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 90 LFFMCIYLHIGRGIYYGSylYKE----TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWI 165
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 284177515 166 WGGFSVDNATLTRFFTFH-FLLPFTIMGLTVMHLLFLHETGSNNPTG 211
Cdd:COG1290 176 FGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPG 222
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-215 |
7.85e-75 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 229.83 E-value: 7.85e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 13 KIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 93 MCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 284177515 173 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSN 215
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGD 203
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-209 |
8.31e-54 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 175.94 E-value: 8.31e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 13 KIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFF 92
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 93 MCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 172
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190
....*....|....*....|....*....|....*..
gi 284177515 173 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNP 209
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNP 199
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-209 |
2.66e-37 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 129.45 E-value: 2.66e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 34 FGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIYYGSYLYKE- 112
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 113 -TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATLTRFFTFH-FLLPFTI 190
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 284177515 191 MGLTVMHLLFLHETGSNNP 209
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-216 |
5.20e-35 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 121.96 E-value: 5.20e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 89 SLFFMCIYLHIGRGIYYGSYLYKE--TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 284177515 167 GGFSVDNATLTRFFTFHF-LLPFTIMGLTVMHLLFLHETGSNNPTGLNSNT 216
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNV 131
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-209 |
8.82e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 114.82 E-value: 8.82e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 25 PSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 284177515 105 YGSYLYKE--TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATLTRFFTF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 284177515 183 H-FLLPFTIMGLTVMHLLFLHETGSNNP 209
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
|