|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 717.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00100 9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00100 89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00100 169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00100 249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00100 329 VADLLTLTWIGGQPVEHPFIIIGQLASILY 358
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-351 |
3.17e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 359.87 E-value: 3.17e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 3 IKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMF 82
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 83 FICLFLHVGRGMYYGSYTFME--TWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFH-FILPFIIAAMAVVHLLFLHETGSNNPTG----LNSDADKIPFHPYYTIKDILGILMMIVFLMTLV 235
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 236 LFFPDllGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILALMPFLHTSKQRSLMFRPIT 313
Cdd:COG1290 260 FFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350
....*....|....*....|....*....|....*...
gi 283469134 314 QILYWILVANLFTLTWIGGQPVehPFVIIGQLASISYL 351
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYF 373
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-198 |
1.22e-92 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 275.02 E-value: 1.22e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSY--TFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 158
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 283469134 159 GFSVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSN 198
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
10-196 |
8.62e-85 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 254.61 E-value: 8.62e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 10 FIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLH 89
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 90 VGRGMYYG--SYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 167
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 283469134 168 TRFFAFHFILPFIIAAMAVVHLLFLHETG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
221-331 |
1.54e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 53.26 E-value: 1.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 221 ILGILMMIVFLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLH 300
Cdd:TIGR01156 44 ILGTIACVVGLAVLD---PAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 283469134 301 T-SKQRSLMFRPITQILYwiLVANLFTLtWIG 331
Cdd:TIGR01156 116 NvNKFQNPFRRPVATTVF--LFGTVVAL-WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 717.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00100 9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00100 89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00100 169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00100 249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00100 329 VADLLTLTWIGGQPVEHPFIIIGQLASILY 358
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 646.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00119 10 PLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00119 90 MFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00119 170 SVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00119 250 LLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTL 329
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00119 330 VANLLILTWIGSQPVEHPFIIIGQLASILY 359
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 641.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00131 9 PLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGAS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00131 89 FFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00131 169 SVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPN 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00131 249 LLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTL 328
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00131 329 VADVLILTWIGGMPVEHPFIIIGQVASVLY 358
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 629.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00074 10 PLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00074 90 FFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00074 170 SVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00074 250 LLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLL 329
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00074 330 VANTLILTWIGGQPVEDPFIEIGQAASILY 359
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 613.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00191 6 PLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGAS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00191 86 FFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00191 166 SVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPN 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00191 246 LLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLW 325
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00191 326 VANFILLTWLGGQPVEDPFILLGQISSFLY 355
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
3-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 600.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 3 IKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMF 82
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 83 FICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 162
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 163 DKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPDLL 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 243 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVA 322
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340
....*....|....*....|....*...
gi 283469134 323 NLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILY 348
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-351 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 570.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00145 10 PVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00145 90 FFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00145 170 SVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00145 250 LLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIF 329
|
330 340 350
....*....|....*....|....*....|.
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISYL 351
Cdd:MTH00145 330 VGNFFILTWIGACPVEEPYETIGQVFTVLYF 360
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-350 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 564.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00034 9 PLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGAS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00034 89 LFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00034 169 SVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPT 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00034 249 ALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLL 328
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00034 329 IATFFILTWIGSQPVEYPFILLGQVASVLY 358
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-350 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 538.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00016 10 PLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00016 90 FFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00016 170 SVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00016 250 ILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLL 329
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00016 330 VSNFLLLTWIGGRPVEPPYEFLGQIFTVFY 359
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-350 |
4.22e-174 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 488.44 E-value: 4.22e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00022 8 PLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGAS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00022 88 LFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00022 168 SVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPN 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00022 248 LLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFL 327
|
330 340 350
....*....|....*....|....*....|
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00022 328 IVDFILLTWIGSQVVEEPFILIGQLLSFFY 357
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-351 |
5.04e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 483.44 E-value: 5.04e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00053 10 PVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00053 90 MFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00053 170 SVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPY 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00053 250 SLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFL 329
|
330 340 350
....*....|....*....|....*....|.
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISYL 351
Cdd:MTH00053 330 VGDFFLLTWIGGQPVEEPYILIGQIASIFYF 360
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-351 |
2.01e-170 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 479.42 E-value: 2.01e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00224 10 PAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00224 90 MFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00224 170 AVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00224 250 LFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLL 329
|
330 340 350
....*....|....*....|....*....|.
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISYL 351
Cdd:MTH00224 330 VTSWAILTWIGGRPVEDPFEGIGQVFTILYF 360
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
11-351 |
8.51e-130 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 376.20 E-value: 8.51e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 11 IDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHV 90
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 91 GRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRF 170
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 171 FAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILG--ILMMIVFLMTLVLFFPDLLGDPDNY 248
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGflILFGVFVIIGIEPRIETLLQDPENF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 249 TPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLFTLT 328
Cdd:MTH00033 256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335
|
330 340
....*....|....*....|....
gi 283469134 329 WIGGQPV-EHPFVIIGQLASISYL 351
Cdd:MTH00033 336 WIGSAPAgADPYVLIGRIATIFYF 359
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-351 |
3.17e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 359.87 E-value: 3.17e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 3 IKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMF 82
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 83 FICLFLHVGRGMYYGSYTFME--TWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 161 SVDKATLTRFFAFH-FILPFIIAAMAVVHLLFLHETGSNNPTG----LNSDADKIPFHPYYTIKDILGILMMIVFLMTLV 235
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 236 LFFPDllGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILALMPFLHTSKQRSLMFRPIT 313
Cdd:COG1290 260 FFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350
....*....|....*....|....*....|....*...
gi 283469134 314 QILYWILVANLFTLTWIGGQPVehPFVIIGQLASISYL 351
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYF 373
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
4-350 |
1.52e-116 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 341.53 E-value: 1.52e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 4 KIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFF 83
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 84 ICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVD 163
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 164 KATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMtLVLFFPDLLG 243
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFII-FSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 244 DPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQrslMFRPITQILYWILVAN 323
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVV 316
|
330 340
....*....|....*....|....*..
gi 283469134 324 LFTLTWIGGQPVEHPFVIIGQLASISY 350
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIY 343
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-198 |
1.22e-92 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 275.02 E-value: 1.22e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 1 PLIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 81 MFFICLFLHVGRGMYYGSY--TFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 158
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 283469134 159 GFSVDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSN 198
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-351 |
6.16e-90 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 273.78 E-value: 6.16e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 2 LIKIINHWFIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASM 81
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 82 FFICLFLHVGRGMYYGSYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 161
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 162 VDKATLTRFFAFHFILPFIIAAMAVVHLLFLHETGSNNPTGL-NSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPD 240
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALmpflhTSKQRSLMFRPITQILYWIL 320
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWV-----PTFNGSSVYSVWRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|.
gi 283469134 321 VANLFTLTWIGGQPVEHPFVIIGQLASISYL 351
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMV 346
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
10-196 |
8.62e-85 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 254.61 E-value: 8.62e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 10 FIDLPAPSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLH 89
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 90 VGRGMYYG--SYTFMETWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 167
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 283469134 168 TRFFAFHFILPFIIAAMAVVHLLFLHETG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
199-346 |
4.03e-53 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 172.06 E-value: 4.03e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 199 NPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPN 278
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 283469134 279 KLGGVLALILSILILALMPFLHTSKQRSlMFRPITQILYWILVANLFTLTWIGGQPVEHPFVIIGQLA 346
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
80-245 |
1.06e-47 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 158.94 E-value: 1.06e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 80 SMFFICLFLHVGRGMYYGSYTFME--TWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 157
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 158 GGFSVDKATLTRFFAFHF-ILPFIIAAMAVVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILMMIVFLMTLVL 236
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 283469134 237 FFPDLLGDP 245
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
250-350 |
1.78e-40 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 137.61 E-value: 1.78e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 250 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPITQILYWILVANLFTLTW 329
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 283469134 330 IGGQPVEHPFVIIGQLASISY 350
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
25-200 |
2.84e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 138.69 E-value: 2.84e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 25 FGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFME- 103
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 104 -TWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH-FILPFII 181
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 283469134 182 AAMAVVHLLFLHETGSNNP 200
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
16-200 |
5.87e-33 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 121.75 E-value: 5.87e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 16 PSNISSWWNFGSLLGICLSVQIITGLFLAMPYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMY 95
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 96 YGSYTFME--TWDIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAF 173
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 283469134 174 H-FILPFIIAAMAVVHLLFLHETGSNNP 200
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
221-331 |
2.27e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 55.57 E-value: 2.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 221 ILGILMMIVFLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLH 300
Cdd:COG5679 45 ILGTIALCIGLAVLD---PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIE 116
|
90 100 110
....*....|....*....|....*....|..
gi 283469134 301 T-SKQRSLMFRPITQILYwiLVANLFTLtWIG 331
Cdd:COG5679 117 NvNKFQNPFRRPVATAVF--LFGTLVTL-WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
221-331 |
8.54e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 53.85 E-value: 8.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 221 ILGILMMIVFLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLH 300
Cdd:CHL00058 44 ILGTIACNVGLAVLE---PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLE 115
|
90 100 110
....*....|....*....|....*....|..
gi 283469134 301 TSKQRSLMF-RPITQILYwiLVANLFTLtWIG 331
Cdd:CHL00058 116 NVNKFQNPFrRPVATTVF--LIGTAVAL-WLG 144
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
221-331 |
1.54e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 53.26 E-value: 1.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 283469134 221 ILGILMMIVFLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLH 300
Cdd:TIGR01156 44 ILGTIACVVGLAVLD---PAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 283469134 301 T-SKQRSLMFRPITQILYwiLVANLFTLtWIG 331
Cdd:TIGR01156 116 NvNKFQNPFRRPVATTVF--LFGTVVAL-WLG 144
|
|
|