|
Name |
Accession |
Description |
Interval |
E-value |
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1-1199 |
0e+00 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 1702.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1 MGKLIRMGAQERRSLWPKRLHWSRPLFLLGMLIIGSTYQYLTSPQGLPTLWAAVSSQHPVKVASRDLSNKEMMMVSSETS 80
Cdd:TIGR00927 1 MGKLIRMGTQERRLLRPKRLHWSRLLFLLGMLIIGSTYQHLRRPQGLPSLWAAVSSQQPIKLASRDLSNDEMMMVSSDPP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 81 KSSSEMEVEAWAPEATAGRDGTPPGIARKNTPSTPRGTASITPAIP-NNYSPTPTGTGKVKEDTSATPSGVLNHY--TQS 157
Cdd:TIGR00927 81 KSSSEMEGEMLAPQATVGRDEATPSIAMENTPSPPRRTAKITPTTPkNNYSPTAAGTERVKEDTPATPSRALNHYisTSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 158 RPMVNSYTRLTaRGEVKSSRPTQSRGKEEKYSPSPLGRMVNSYAPSTLMTMPRSHGITPRTTVKDREIMATKKMLATNPS 237
Cdd:TIGR00927 161 RQRVKSYTPKP-RGEVKSSSPTQTREKVRKYTPSPLGRMVNSYAPSTFMTMPRSHGITPRTTVKDSEITATYKMLETNPS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 238 KRLVEKTTPTPLKGITDNTPTFLLSDLETDTLTSPRNVVEKKTLTTPRRVDSNSSTNHQGLVGKNNLTTPQGMVLEHTAA 317
Cdd:TIGR00927 240 KRTAGKTTPTPLKGMTDNTPTFLTREVETDLLTSPRSVVEKNTLTTPRRVESNSSTNHWGLVGKNNLTTPQGTVLEHTPA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 318 VSEGQVTISTMTRSSPTETKASTDAWKVRNPLPRTSAPIIRISSATFRGLLKNPSKAPSTPAAPRVRANPTIQVRHCLVV 397
Cdd:TIGR00927 320 TSEGQVTISIMTGSSPAETKASTAAWKIRNPLSRTSAPAVRIASATFRGLEKNPSTAPSTPATPRVRAVLTTQVHHCVVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 398 EPAPVAPTAPSPSWTTAVIPGIPS------PSGQPDLYPKAEYPRDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYF 471
Cdd:TIGR00927 400 KPAPAVPTTPSPSLTTALFPEAPSpspsalPPGQPDLHPKAEYPPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYF 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 472 VPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWP 551
Cdd:TIGR00927 480 VPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSREILNLTWWP 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 552 LFRDITFYIFDLMMLILFFLDSLIAWWESVLLLLAYAFYVFTMKWNQQLELWVKEQLNKRPVAKVMALGDLSKpgdgtvv 631
Cdd:TIGR00927 560 LFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYALYVFTMKWNKQIELWVKEQLSRRPVAKVMALGDLSK------- 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 632 vdeqqdnkklklssmltrgsssaslhnstirstiyqlmlhsldplgearpskdkeeetlipeakatpqakaeskpeeepa 711
Cdd:TIGR00927 --------------------------------------------------------------------------------
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 712 klpevtvtpapapdvkgdqeedpgsqGVGAEAENTGERTGGEAEAP--AEGENGERSGGDAALGGESEGKAENESEGDIP 789
Cdd:TIGR00927 633 --------------------------GDVAEAEHTGERTGEEGERPteAEGENGEESGGEAEQEGETETKGENESEGEIP 686
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 790 AERRGDDEDEGEIQAEGGEVKGDEDEGEIQAGEGGEVEGDEDEGEIQAGEGGEVEGDEDEGEIQAGEAGEVEGDEDEGEI 869
Cdd:TIGR00927 687 AERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEH 766
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 870 QAGEAGEVEGDEDEGEIQAGEGGEVKGDEGEIQAGEAGEVEGEDGEVEGGEDEGEIQAGEGGEGETGEQELNAEIQGEAK 949
Cdd:TIGR00927 767 EGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAK 846
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 950 DDEEGVDGEGGGDGGDSEDEEEEDEEEEDEEEEEEEEEEEEEENEQPLSLEWPETRRKQAIYLFLLPIVFPLWLTVPDVR 1029
Cdd:TIGR00927 847 QDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPLSLEWPETRQKQAIYLFLLPIVFPLWLTVPDVR 926
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1030 RLEAKKFFVITFLGSILWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGS 1109
Cdd:TIGR00927 927 RQEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGS 1006
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1110 NIFDITVGLPLPWMLFSLINGLQPVAVSSNGLFCAIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISVMLE 1189
Cdd:TIGR00927 1007 NIFDITVGLPVPWLLFSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLE 1086
|
1210
....*....|
gi 27901799 1190 DRIISCPVSV 1199
Cdd:TIGR00927 1087 DRIISCPVSV 1096
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
451-605 |
2.43e-45 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 165.96 E-value: 2.43e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 451 LHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNI 530
Cdd:TIGR00367 1 LLLIGYLILGLILLIYGADLFVKSSVRIARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDIGVGNVIGSNIFNI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27901799 531 LFVIGTCALFSrEILNLTWWpLFRDITFYIFDLMMLILFFLDSLIAWWESVLLLLAYAFYvftMKWNQQLELWVK 605
Cdd:TIGR00367 81 LLILGLSAIFS-PIIVDKDW-LRRDILFYLLVSILLLFFGLDGQISRIDGVVLLILYIVY---LLFLVKNERWVK 150
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
1036-1181 |
2.41e-39 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 148.63 E-value: 2.41e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1036 FFVITFLGSILWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT 1115
Cdd:TIGR00367 170 FSLVLLIIGLIGLVVGSRLLVDGAVKIAEILGISEKIIGLTLLAIGTSLPELVVSLAAARKGLGDIAVGNVIGSNIFNIL 249
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 27901799 1116 VGLPLPWmLFSLINgLQPVAVSSNGLFCAIVLLFLMLLFVIsSIALCKWrmnkiLGFTMFLLYFVF 1181
Cdd:TIGR00367 250 VGLGVPS-LFMPIP-VEPLAYNLDAPVMVIVTLLLMLFFKT-SMKLGRW-----EGILLLALYIAY 307
|
|
| Na_Ca_ex |
pfam01699 |
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ... |
452-596 |
3.55e-34 |
|
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.
Pssm-ID: 426387 [Multi-domain] Cd Length: 149 Bit Score: 128.49 E-value: 3.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 452 HIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNIL 531
Cdd:pfam01699 1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27901799 532 FVIGTCALFSREILNLTW----WPLFRDITFYIFDLMMLILFFLDSLIAWWESVLLLLAYAFYVFTMKW 596
Cdd:pfam01699 81 LVLGLSALIGPVKVDSLLlkldLGVLLLVALLLLLLLLLLLLPLFGRLSRFEGLVLLLLYIVYLVFQIV 149
|
|
| Na_Ca_ex |
pfam01699 |
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral ... |
1036-1187 |
1.99e-29 |
|
Sodium/calcium exchanger protein; This is a family of sodium/calcium exchanger integral membrane proteins. This family covers the integral membrane regions of the proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells. Ca2+ is moved into or out of the cytosol depending on Na+ concentration. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3.
Pssm-ID: 426387 [Multi-domain] Cd Length: 149 Bit Score: 114.62 E-value: 1.99e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1036 FFVITFLGSILWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT 1115
Cdd:pfam01699 1 LSLLLFILGLLLISVAADLLVDSAEVLARVLGISGTVLGLTILALGTSLPELVSSIIAALRGEPDLALGNVIGSNIFNIL 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27901799 1116 VGLPLPWMLFSLINGLQPVAVSSNGLFCAIVLLFLMLLFVISSIalcKWRMNKILGFTMFLLYFVFLIISVM 1187
Cdd:pfam01699 81 LVLGLSALIGPVKVDSLLLKLDLGVLLLVALLLLLLLLLLLLPL---FGRLSRFEGLVLLLLYIVYLVFQIV 149
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
469-594 |
4.21e-28 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 115.62 E-value: 4.21e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 469 EYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFSReiLNLT 548
Cdd:COG0530 2 DLLVRGADALARRLGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIRP--LAVD 79
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 27901799 549 WWPLFRDITFYIFDLMMLILFFLDSLIAWWESVLLLLAYAFYVFTM 594
Cdd:COG0530 80 RRVLRRDLPFLLLASLLLLALLLDGTLSRIDGVILLLLYVLYLYYL 125
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
1038-1184 |
1.64e-23 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 102.13 E-value: 1.64e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1038 VITFLGSILWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVG 1117
Cdd:COG0530 154 LLLLVLGLALLVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATSIVAARKGEDDLAVGNIIGSNIFNILLV 233
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27901799 1118 LPL-----PWMLFSLINGLQPVAVSSNGLFCAIvllflmllfvissIALCKWRMNKILGFTMFLLYFVFLII 1184
Cdd:COG0530 234 LGIgalitPIPVDPAVLSFDLPVMLAATLLLLG-------------LLRTGGRIGRWEGLLLLALYLAYLAL 292
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
456-594 |
1.55e-21 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 96.36 E-value: 1.55e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 456 MMYVFVALA--IVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFV 533
Cdd:COG0530 154 LLLLVLGLAllVVGARLLVDGAVEIARALGVSELVIGLTIVAIGTSLPELATSIVAARKGEDDLAVGNIIGSNIFNILLV 233
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27901799 534 IGTCALFSReiLNLTWWPLFRDITFYI-FDLMMLILFFLDSLIAWWESVLLLLAYAFYVFTM 594
Cdd:COG0530 234 LGIGALITP--IPVDPAVLSFDLPVMLaATLLLLGLLRTGGRIGRWEGLLLLALYLAYLALL 293
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
459-590 |
4.38e-14 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 74.67 E-value: 4.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 459 VFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCA 538
Cdd:TIGR00367 177 IGLIGLVVGSRLLVDGAVKIAEILGISEKIIGLTLLAIGTSLPELVVSLAAARKGLGDIAVGNVIGSNIFNILVGLGVPS 256
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 27901799 539 LFSR-EILNLTwwpLFRDITFYIFDLMMLILFF-LDSLIAWWESVLLLLAYAFY 590
Cdd:TIGR00367 257 LFMPiPVEPLA---YNLDAPVMVIVTLLLMLFFkTSMKLGRWEGILLLALYIAY 307
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
1067-1124 |
7.17e-13 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 71.22 E-value: 7.17e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 27901799 1067 GISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWML 1124
Cdd:PRK10734 205 AISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALI 262
|
|
| ECM27 |
COG0530 |
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; |
1059-1191 |
3.30e-12 |
|
Ca2+/Na+ antiporter [Inorganic ion transport and metabolism];
Pssm-ID: 440296 [Multi-domain] Cd Length: 293 Bit Score: 68.62 E-value: 3.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1059 AHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWMLFSLIngLQPVAVSS 1138
Cdd:COG0530 8 ADALARRLGISPLVIGLTIVAFGTSLPELAVSVTAALDGSPDIAVGNVVGSNIANILLILGLAALIRPLA--VDRRVLRR 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 27901799 1139 NGLFCAivllflmllfvISSIALC----KWRMNKILGFTMFLLYFVFLIISVMLEDR 1191
Cdd:COG0530 86 DLPFLL-----------LASLLLLalllDGTLSRIDGVILLLLYVLYLYYLIRRARK 131
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
449-611 |
2.04e-11 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 68.67 E-value: 2.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 449 VVLHIFGMMYVFVALAIVCDEyFVPALGVITDK-----------------LQI-SEDVAGATFMAAGGSAPELFTSLIGV 510
Cdd:TIGR00845 75 ATVYFVAMVYMFLGVSIIADR-FMASIEVITSQekeitikkpngettvttVRIwNETVSNLTLMALGSSAPEILLSVIEV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 511 ----FIShSNVGIGTIVGSAVFNILFVIGTCALF-----SREILNLTWWplFRDITFYIFD---LMMLILFFLDSLIAWW 578
Cdd:TIGR00845 154 cghnFEA-GDLGPSTIVGSAAFNMFIIIAICVYVipdgeTRKIKHLRVF--FVTAAWSVFAyvwLYLILAVFSPGVVEVW 230
|
170 180 190
....*....|....*....|....*....|...
gi 27901799 579 ESVLLLLAYAFYVFTmKWNQQLELWVKEQLNKR 611
Cdd:TIGR00845 231 EGLLTFFFFPLCVVF-AWVADRRLLFYKYVYKR 262
|
|
| TIGR00367 |
TIGR00367 |
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and ... |
1062-1189 |
1.44e-10 |
|
K+-dependent Na+/Ca+ exchanger related-protein; This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General]
Pssm-ID: 273039 [Multi-domain] Cd Length: 307 Bit Score: 63.88 E-value: 1.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1062 VGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPwMLFSlinglqPVAVSSNGL 1141
Cdd:TIGR00367 28 IARHLGISPLIIGVTVVAIGTSLPELFTSLIASLMGQPDIGVGNVIGSNIFNILLILGLS-AIFS------PIIVDKDWL 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 27901799 1142 FcaIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISVMLE 1189
Cdd:TIGR00367 101 R--RDILFYLLVSILLLFFGLDGQISRIDGVVLLILYIVYLLFLVKNE 146
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
92-435 |
1.45e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.57 E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 92 APEATAGRDGTPPGIARKNTP----STPRGTASITPAIPNNYSPTPTGTGKvkedtSATPSGVLNHYTQSRPMVNSYTRL 167
Cdd:PHA03247 2581 AVTSRARRPDAPPQSARPRAPvddrGDPRGPAPPSPLPPDTHAPDPPPPSP-----SPAANEPDPHPPPTVPPPERPRDD 2655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 168 TARGEVKSSRPTQSRGKEEKYSpSPLGRMVNSYAPSTLMTM--------------PRSHGITPRTTVKdreiMATKKMLA 233
Cdd:PHA03247 2656 PAPGRVSRPRRARRLGRAAQAS-SPPQRPRRRAARPTVGSLtsladpppppptpePAPHALVSATPLP----PGPAAARQ 2730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 234 TNPSKRLVEKTTPTPLKGITDNTPTFLLSDLETDT---LTSPRNVVEKKTLTTPRRVDSNSSTNHQGLVGKNNLTTPQGM 310
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGppaPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAA 2810
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 311 VLEHTAAVSEGQVTISTmtrSSPTETKASTDAWKVRNPLPRTSAP---IIRISSATFRGLLKNPSKAPSTPAAPRVR--A 385
Cdd:PHA03247 2811 VLAPAAALPPAASPAGP---LPPPTSAQPTAPPPPPGPPPPSLPLggsVAPGGDVRRRPPSRSPAAKPAAPARPPVRrlA 2887
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 27901799 386 NPTIQVRHCLVVEPA-----PVAPTAPSPSWTTAVIPGIPSPSGQPDLYPKAEYP 435
Cdd:PHA03247 2888 RPAVSRSTESFALPPdqperPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP 2942
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
477-541 |
6.60e-08 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 55.81 E-value: 6.60e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27901799 477 VITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFS 541
Cdd:PRK10734 199 VLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALIS 263
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
677-816 |
2.64e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 54.59 E-value: 2.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 677 GEARPSKDKEEETLIPEAKATPQAKAESKPEEEPAKLPEVTVTPA-PAPDvkGDQEEDPGSQGVGaEAENTGERTGGEAE 755
Cdd:PHA03169 103 PTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHePAPP--ESHNPSPNQQPSS-FLQPSHEDSPEEPE 179
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27901799 756 aPAEGENGERSGGdaalGGESEGKAENESEGDiPAERRGDDEDEGEIQAEGGEvkgDEDEG 816
Cdd:PHA03169 180 -PPTSEPEPDSPG----PPQSETPTSSPPPQS-PPDEPGEPQSPTPQQAPSPN---TQQAV 231
|
|
| PRK10734 |
PRK10734 |
putative calcium/sodium:proton antiporter; Provisional |
1055-1141 |
6.09e-07 |
|
putative calcium/sodium:proton antiporter; Provisional
Pssm-ID: 182684 [Multi-domain] Cd Length: 325 Bit Score: 52.73 E-value: 6.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1055 MVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITvglplpwmlfsLING---- 1130
Cdd:PRK10734 22 LVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNIL-----------LILGlaal 90
|
90
....*....|.
gi 27901799 1131 LQPVAVSSNGL 1141
Cdd:PRK10734 91 IRPFTVHSDVL 101
|
|
| PLN03151 |
PLN03151 |
cation/calcium exchanger; Provisional |
447-600 |
7.99e-07 |
|
cation/calcium exchanger; Provisional
Pssm-ID: 215604 [Multi-domain] Cd Length: 650 Bit Score: 53.23 E-value: 7.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 447 GWVVLHIFgMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSlIGVFISHS--NVGIGTIVG 524
Cdd:PLN03151 139 GYAVLGVW-LVALFYLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFAS-IAAFVGKDagEVGLNSVLG 216
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 27901799 525 SAVFNILFVIGTCAL-FSREILNLTWWPLFRDITFYIFDLMMLILFFLDSLIAWWESVLLLLAYAFYVFTMKWNQQL 600
Cdd:PLN03151 217 GAVFVTCVVVGIVSLcVADKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANEIL 293
|
|
| PLN03151 |
PLN03151 |
cation/calcium exchanger; Provisional |
1041-1186 |
8.14e-06 |
|
cation/calcium exchanger; Provisional
Pssm-ID: 215604 [Multi-domain] Cd Length: 650 Bit Score: 50.15 E-value: 8.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1041 FLGSILWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGlGD---MAVSSSVGSNIFDITVG 1117
Cdd:PLN03151 489 FIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNG-GDgvqIAMSGCYAGPMFNTLVG 567
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1118 LPLPWMLFSLINGLQPVAV-SSNGLFCAIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISV 1186
Cdd:PLN03151 568 LGMSMLLGAWSKSPESYMLpEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRV 637
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
722-817 |
3.44e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 47.66 E-value: 3.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 722 PAPDVKGDQEEdpgsQGVGAEAENTGertGGEAEAPAEGENGERSGGDAALGGESEGKAENESEGDIPAERRGDDEDEGE 801
Cdd:PHA03169 103 PTPSPSGSAEE----LASGLSPENTS---GSSPESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSP 175
|
90
....*....|....*.
gi 27901799 802 IQAEGGEVKGDEDEGE 817
Cdd:PHA03169 176 EEPEPPTSEPEPDSPG 191
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
675-793 |
1.16e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 675 PLGEARPSKDKEEETLIPEAKATPQAKAESKPEEEPAKLPEVTVTPAP-APDvkGDQEEDPGSQGVGAEaentgertGGE 753
Cdd:PHA03169 140 PPSHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPdSPG--PPQSETPTSSPPPQS--------PPD 209
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 27901799 754 AEAPAEGENGERS-GGDAALGGESEGK-AENESEGDIPAERR 793
Cdd:PHA03169 210 EPGEPQSPTPQQApSPNTQQAVEHEDEpTEPEREGPPFPGHR 251
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
1040-1122 |
2.11e-04 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 45.55 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 1040 TFLGSILWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLG-DMAVSSSVGSNIFDITVGL 1118
Cdd:TIGR00845 758 CFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYaDASIGNVTGSNAVNVFLGI 837
|
....
gi 27901799 1119 PLPW 1122
Cdd:TIGR00845 838 GVAW 841
|
|
| PHA02664 |
PHA02664 |
hypothetical protein; Provisional |
706-817 |
3.92e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 177447 Cd Length: 534 Bit Score: 44.61 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 706 PEEEPaKLPEVTVTPAPAPD----VKGDQEEDPGSQG--VGAEAENTGERTGGEAEAPAEG-ENGERSGGDAALGGESEG 778
Cdd:PHA02664 353 PPEEP-RMDGLCVFPTPAEPaalfVDGNEVIAAGAAAamIAAAERAANGARGSPMAAPEEGrAAAAAAAANAPADQDVEA 431
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 27901799 779 KAENESEGD--IPAER-RGD-DEDEGEIQAEGGEVKGDEDEGE 817
Cdd:PHA02664 432 EAHDEFDQDpgAPAHAdRADsDEDDMDEQESGDERADGEDDSD 474
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
677-819 |
4.19e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 44.51 E-value: 4.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 677 GEARPSKDKEEETLIPEAKATPQAKAESKPEEEPAKLPEVTVTPAPAPDVKGDQEEDPGSQGVGAEAENTGERtGGEAEA 756
Cdd:PRK12678 85 AAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEAR-ADAAER 163
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 27901799 757 PAEGENGERSGGDAAlgGESEGKAENESEGDipAERRGDDEDEGEIQAEGGEVKGDEDEGEIQ 819
Cdd:PRK12678 164 TEEEERDERRRRGDR--EDRQAEAERGERGR--REERGRDGDDRDRRDRREQGDRREERGRRD 222
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
674-820 |
2.28e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 42.31 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 674 DPLGEARPSKDKEEETlipEAKATPQAKAESKPEEEPAklpevTVTPAPAPDVKGDQEEDPgsqgvgAEAENTGERTGGE 753
Cdd:COG5271 507 DELTAEETSADDGADT---DAAADPEDSDEDALEDETE-----GEENAPGSDQDADETDEP------EATAEEDEPDEAE 572
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 27901799 754 AEAPAEGENGErsgGDAAlGGESEGKAENESEGDIPAERRGDDEDEGEIQAEGGEvkgDEDEGEIQA 820
Cdd:COG5271 573 AETEDATENAD---ADET-EESADESEEAEASEDEAAEEEEADDDEADADADGAA---DEEETEEEA 632
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
672-738 |
3.68e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 40.37 E-value: 3.68e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 27901799 672 SLDPLGEARPSKDKEEEtliPEAKATPQAKAESKPEEEPAKLPEVTVTPAPAPDVKGDQEEDPGSQG 738
Cdd:PRK11633 84 SLDPATVAPPNTPVEPE---PAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEEKAAPTG 147
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
679-818 |
7.38e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 40.66 E-value: 7.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 679 ARPSKDKEEETLIPEAKATPQAKAESKPEEEPAKLPEVTVTPA--PAPDVKGDQEEDPGSQGVGAEAENTGERTGGE--- 753
Cdd:PRK12678 95 AEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAArrGAARKAGEGGEQPATEARADAAERTEEEERDErrr 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 754 ----AEAPAEGENGERS----------GGDAALGGESEGKAENESEGDI------PAERRGDDEDEGEIQAEGGEVKGDE 813
Cdd:PRK12678 175 rgdrEDRQAEAERGERGrreergrdgdDRDRRDRREQGDRREERGRRDGgdrrgrRRRRDRRDARGDDNREDRGDRDGDD 254
|
....*
gi 27901799 814 DEGEI 818
Cdd:PRK12678 255 GEGRG 259
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
728-808 |
7.93e-03 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 40.16 E-value: 7.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27901799 728 GDQEEDPGSQGVGAEAENTGErtggEAEAPAEGENGERSGGDAALGGESEGKAENESEGDIPAERRGDDEDEGEIQAEGG 807
Cdd:COG4547 208 AEELGEDEDEEDEDDEDDSGE----QEEDEEDGEDEDEESDEGAEAEDAEASGDDAEEGESEAAEAESDEMAEEAEGEDS 283
|
.
gi 27901799 808 E 808
Cdd:COG4547 284 E 284
|
|
| |
