unnamed protein product, partial [Mus musculus]
Protein Classification
nucleoporin complex subunit 54 family protein( domain architecture ID 10620655)
nucleoporin complex subunit 54 family protein is part of the nucleoporin complex, a large proteinaceous assembly that acts as a portal for exchanging macromolecules between the nucleus and cytoplasm
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Nup54 | pfam13874 | Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, ... |
303-364 | 1.07e-25 | ||
Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and as such they would form a zone of equal affinity spanning the central channel. The diffusion of importin-beta import complexes through the central channel may be a stochastic process as the affinities are similar, whereas movement from cytoplasmic fibrils to the central channel and from the central channel to the nuclear basket would be facilitated by the subtle differences in affinity between them. : Pssm-ID: 464011 [Multi-domain] Cd Length: 139 Bit Score: 100.35 E-value: 1.07e-25
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| Name | Accession | Description | Interval | E-value | ||
| Nup54 | pfam13874 | Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, ... |
303-364 | 1.07e-25 | ||
Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and as such they would form a zone of equal affinity spanning the central channel. The diffusion of importin-beta import complexes through the central channel may be a stochastic process as the affinities are similar, whereas movement from cytoplasmic fibrils to the central channel and from the central channel to the nuclear basket would be facilitated by the subtle differences in affinity between them. Pssm-ID: 464011 [Multi-domain] Cd Length: 139 Bit Score: 100.35 E-value: 1.07e-25
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| Name | Accession | Description | Interval | E-value | ||
| Nup54 | pfam13874 | Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, ... |
303-364 | 1.07e-25 | ||
Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and as such they would form a zone of equal affinity spanning the central channel. The diffusion of importin-beta import complexes through the central channel may be a stochastic process as the affinities are similar, whereas movement from cytoplasmic fibrils to the central channel and from the central channel to the nuclear basket would be facilitated by the subtle differences in affinity between them. Pssm-ID: 464011 [Multi-domain] Cd Length: 139 Bit Score: 100.35 E-value: 1.07e-25
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