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Conserved domains on  [gi|261878539|ref|NP_001159887|]
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peroxisomal bifunctional enzyme isoform 2 [Homo sapiens]

Protein Classification

fatty acid beta-oxidation multifunctional protein( domain architecture ID 1002730)

fatty acid beta-oxidation multifunctional protein, similar to human peroxisomal bifunctional enzyme that possesses 2-enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase, and delta 3, delta 2-enoyl-CoA isomerase activities

Gene Ontology:  GO:0019395|GO:0006635
PubMed:  2303409

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
fadJ super family cl35999
fatty acid oxidation complex subunit alpha FadJ;
2-609 2.16e-120

fatty acid oxidation complex subunit alpha FadJ;


The actual alignment was detected with superfamily member PRK11154:

Pssm-ID: 236864 [Multi-domain]  Cd Length: 708  Bit Score: 373.46  E-value: 2.16e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIA--HAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS 79
Cdd:PRK11154 112 CLGGGLELALACHYRVCtdDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVPH 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  80 D-----PVEEAIRFAQRVSDQPLESRRLCNKPI-QSLpnmdsIFSEALLKMRRQHPGCL-AQEACVRAVQAAVQYPYEVG 152
Cdd:PRK11154 192 SillevAVELAKKGKPARRPLPVRERLLEGNPLgRAL-----LFKQARKKTLAKTQGNYpAPERILDVVRTGLEKGMSSG 266
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 153 IKKEEELFLYLLQSGQARALQYAFFAERKANKwstPSGASwktASARPVSSVGVVGLGTMGRGIV-ISFARARIPVIAVD 231
Cdd:PRK11154 267 YEAEARAFGELAMTPESAALRSIFFATTEMKK---DTGSD---AKPRPVNKVGVLGGGLMGGGIAyVTATKAGLPVRIKD 340
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 232 SDKNQLATANKMITSVLEKE-------ASKMQQsghpwsgpKPRLTSSVKELGG---VDLVIEAVFEEMSLKKQVFAELS 301
Cdd:PRK11154 341 INPQGINHALKYSWDLLDKKvkrrhlkPSERDK--------QMALISGTTDYRGfkhADVVIEAVFEDLALKQQMVAEVE 412
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 302 AVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCF 381
Cdd:PRK11154 413 QNCAPHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVRDGA 492
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 382 GFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKsrkgqglTGPTLLPGTPARKRGnrr 461
Cdd:PRK11154 493 GFYVNRILAPYINEAARLLLEGEPIEHIDAALVKFGFPVGPITLLDEVGIDVGTK-------IIPILEAALGERFSA--- 562
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 462 ycpiPDVLCEL---GRFGQKTGKGWYQYDKPLGRIHK-PDPWLSKFLSryrkthhIEPRT-ISQDEILERCLYSLINEAF 536
Cdd:PRK11154 563 ----PAAFDKLlndDRKGRKNGRGFYLYGQKGKKSKKqVDESVYPLLG-------ITPQSrLSANEIAERCVMLMLNEAV 631
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 261878539 537 RILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDipQLEPSDYLKKLASQG 609
Cdd:PRK11154 632 RCLDEGIIRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAILERLAAQYGD--RFTPCERLVEMAERG 702
 
Name Accession Description Interval E-value
fadJ PRK11154
fatty acid oxidation complex subunit alpha FadJ;
2-609 2.16e-120

fatty acid oxidation complex subunit alpha FadJ;


Pssm-ID: 236864 [Multi-domain]  Cd Length: 708  Bit Score: 373.46  E-value: 2.16e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIA--HAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS 79
Cdd:PRK11154 112 CLGGGLELALACHYRVCtdDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVPH 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  80 D-----PVEEAIRFAQRVSDQPLESRRLCNKPI-QSLpnmdsIFSEALLKMRRQHPGCL-AQEACVRAVQAAVQYPYEVG 152
Cdd:PRK11154 192 SillevAVELAKKGKPARRPLPVRERLLEGNPLgRAL-----LFKQARKKTLAKTQGNYpAPERILDVVRTGLEKGMSSG 266
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 153 IKKEEELFLYLLQSGQARALQYAFFAERKANKwstPSGASwktASARPVSSVGVVGLGTMGRGIV-ISFARARIPVIAVD 231
Cdd:PRK11154 267 YEAEARAFGELAMTPESAALRSIFFATTEMKK---DTGSD---AKPRPVNKVGVLGGGLMGGGIAyVTATKAGLPVRIKD 340
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 232 SDKNQLATANKMITSVLEKE-------ASKMQQsghpwsgpKPRLTSSVKELGG---VDLVIEAVFEEMSLKKQVFAELS 301
Cdd:PRK11154 341 INPQGINHALKYSWDLLDKKvkrrhlkPSERDK--------QMALISGTTDYRGfkhADVVIEAVFEDLALKQQMVAEVE 412
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 302 AVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCF 381
Cdd:PRK11154 413 QNCAPHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVRDGA 492
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 382 GFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKsrkgqglTGPTLLPGTPARKRGnrr 461
Cdd:PRK11154 493 GFYVNRILAPYINEAARLLLEGEPIEHIDAALVKFGFPVGPITLLDEVGIDVGTK-------IIPILEAALGERFSA--- 562
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 462 ycpiPDVLCEL---GRFGQKTGKGWYQYDKPLGRIHK-PDPWLSKFLSryrkthhIEPRT-ISQDEILERCLYSLINEAF 536
Cdd:PRK11154 563 ----PAAFDKLlndDRKGRKNGRGFYLYGQKGKKSKKqVDESVYPLLG-------ITPQSrLSANEIAERCVMLMLNEAV 631
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 261878539 537 RILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDipQLEPSDYLKKLASQG 609
Cdd:PRK11154 632 RCLDEGIIRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAILERLAAQYGD--RFTPCERLVEMAERG 702
FadB COG1250
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA ...
200-486 1.23e-103

3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA dehydrogenase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440862 [Multi-domain]  Cd Length: 281  Bit Score: 315.51  E-value: 1.23e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 200 PVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKmqqsgHPWSGPKP-------RLTSS 272
Cdd:COG1250    1 EIKKVAVIGAGTMGAGIAAVFANAGYEVVLLDISPEALERARARIAKLLDKLVKK-----GKLTEEEAdaalariTPTTD 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 273 VKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPS 352
Cdd:COG1250   76 LAALADADLVIEAVPEDLDLKQEVFAELDAVAPPDAILASNTSSLSITELAAATKRPERFIGLHFFNPVPLMPLVEVIRG 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 353 QYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGS-KPEEVDQVLEE-FGFKMGPFRVSDLAG 430
Cdd:COG1250  156 PATSDETVATAVAFARRLGKTPVVVKDTPGFIVNRILVPYLNEAIRLLEEGVaSPEDIDAAMRLgFGFPMGPFELADLVG 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 261878539 431 LDVGWKSRKgqgltgpTLLPGTPARKrgnRRYCPIPDVLCELGRFGQKTGKGWYQY 486
Cdd:COG1250  236 LDTALAVLE-------VLYEALGDPR---YRPPPLLKKLVEAGRLGRKTGRGFYDY 281
fa_ox_alpha_mit TIGR02441
fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of ...
4-610 2.26e-97

fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) _ 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human (SP:P40939), pig (SP:Q29554), and rat (SP:Q64428). The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).


Pssm-ID: 131494 [Multi-domain]  Cd Length: 737  Bit Score: 314.08  E-value: 2.26e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539    4 GGGLELALGCHYRIAHAEAQ--VGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-- 79
Cdd:TIGR02441 121 GGGLELALACHYRIATKDRKtlLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQLVDPlg 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   80 ---DPVEE---------AIRFAQRVSDQPLESRR---LCNKPIQSLPNM----DSIFSEALLKMRRQHPGCL-AQEACVR 139
Cdd:TIGR02441 201 pglKPAEEntieyleevAVKFAQGLANGKLSINRdkgLVHKITQYVMTNpfvrQQVYKTAEDKVMKQTKGLYpAPLKILD 280
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  140 AVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFA--ERKANKWSTPSgaswktasaRPVSSVGVVGLGTMGRGIV 217
Cdd:TIGR02441 281 VVRTGYDQGPDAGYEAESKAFGELSMTFESKALIGLFHGqtDCKKNKFGKPQ---------RPVKTLAVLGAGLMGAGIA 351
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  218 ISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQ 295
Cdd:TIGR02441 352 QVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLdySGFKNADMVIEAVFEDLSLKHK 431
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  296 VFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGV 375
Cdd:TIGR02441 432 VIKEVEAVVPPHCIIASNTSALPIKDIAAVSSRPEKVIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVI 511
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  376 VVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGwkSRKGQGLtgptllpgtpAR 455
Cdd:TIGR02441 512 VVKDGPGFYTTRCLGPMLAEVIRLLQEGVDPKKLDKLTTKFGFPVGAATLADEVGVDVA--EHVAEDL----------GK 579
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  456 KRGNRRYCPIPDVLCEL---GRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKThhIEPRTISQDEILERCLYSLI 532
Cdd:TIGR02441 580 AFGERFGGGSAELLSELvkaGFLGRKSGKGIFIYQEGKKGSKKVNSDADEILAQYKLP--PKAEVSSPEDIQIRLVSRFV 657
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  533 NEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKY---YRQnpdipQLEPSDYLKKLASQG 609
Cdd:TIGR02441 658 NEAVLCLEEGILASPSEGDIGAVFGLGFPPFLGGPFRFVDLYGADKLVDKMEKYaaaYGV-----QFTPCQLLLDHAKSP 732

                  .
gi 261878539  610 N 610
Cdd:TIGR02441 733 G 733
3HCDH_N pfam02737
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda ...
203-380 1.54e-66

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda crystallin.


Pssm-ID: 397037 [Multi-domain]  Cd Length: 180  Bit Score: 215.48  E-value: 1.54e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  203 SVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRL--TSSVKELGGVD 280
Cdd:pfam02737   1 KVAVIGAGTMGAGIAQVFALAGLEVVLVDISEEALEKALERIESSLERLVEKGRITEEEVDAALARIsfTTDLAAAVDAD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  281 LVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTI 360
Cdd:pfam02737  81 LVIEAVPENLELKRKLFAELDAIAPPDAILATNTSSLSITELAAATKRPERFIGLHFFNPPPLMPLVEVVRGEKTSPETV 160
                         170       180
                  ....*....|....*....|
gi 261878539  361 ATVMNLSKKIKKIGVVVGNC 380
Cdd:pfam02737 161 ATTVELAKKIGKTPVVVKDT 180
crotonase-like cd06558
Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse ...
1-92 5.53e-30

Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.


Pssm-ID: 119339 [Multi-domain]  Cd Length: 195  Bit Score: 116.89  E-value: 5.53e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:cd06558  103 AALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDE 182
                         90
                 ....*....|...
gi 261878539  81 -PVEEAIRFAQRV 92
Cdd:cd06558  183 eLLAAALELARRL 195
 
Name Accession Description Interval E-value
fadJ PRK11154
fatty acid oxidation complex subunit alpha FadJ;
2-609 2.16e-120

fatty acid oxidation complex subunit alpha FadJ;


Pssm-ID: 236864 [Multi-domain]  Cd Length: 708  Bit Score: 373.46  E-value: 2.16e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIA--HAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS 79
Cdd:PRK11154 112 CLGGGLELALACHYRVCtdDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVPH 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  80 D-----PVEEAIRFAQRVSDQPLESRRLCNKPI-QSLpnmdsIFSEALLKMRRQHPGCL-AQEACVRAVQAAVQYPYEVG 152
Cdd:PRK11154 192 SillevAVELAKKGKPARRPLPVRERLLEGNPLgRAL-----LFKQARKKTLAKTQGNYpAPERILDVVRTGLEKGMSSG 266
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 153 IKKEEELFLYLLQSGQARALQYAFFAERKANKwstPSGASwktASARPVSSVGVVGLGTMGRGIV-ISFARARIPVIAVD 231
Cdd:PRK11154 267 YEAEARAFGELAMTPESAALRSIFFATTEMKK---DTGSD---AKPRPVNKVGVLGGGLMGGGIAyVTATKAGLPVRIKD 340
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 232 SDKNQLATANKMITSVLEKE-------ASKMQQsghpwsgpKPRLTSSVKELGG---VDLVIEAVFEEMSLKKQVFAELS 301
Cdd:PRK11154 341 INPQGINHALKYSWDLLDKKvkrrhlkPSERDK--------QMALISGTTDYRGfkhADVVIEAVFEDLALKQQMVAEVE 412
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 302 AVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCF 381
Cdd:PRK11154 413 QNCAPHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKMPLVEVIPHAKTSAETIATTVALAKKQGKTPIVVRDGA 492
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 382 GFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKsrkgqglTGPTLLPGTPARKRGnrr 461
Cdd:PRK11154 493 GFYVNRILAPYINEAARLLLEGEPIEHIDAALVKFGFPVGPITLLDEVGIDVGTK-------IIPILEAALGERFSA--- 562
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 462 ycpiPDVLCEL---GRFGQKTGKGWYQYDKPLGRIHK-PDPWLSKFLSryrkthhIEPRT-ISQDEILERCLYSLINEAF 536
Cdd:PRK11154 563 ----PAAFDKLlndDRKGRKNGRGFYLYGQKGKKSKKqVDESVYPLLG-------ITPQSrLSANEIAERCVMLMLNEAV 631
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 261878539 537 RILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDipQLEPSDYLKKLASQG 609
Cdd:PRK11154 632 RCLDEGIIRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAILERLAAQYGD--RFTPCERLVEMAERG 702
fadB PRK11730
fatty acid oxidation complex subunit alpha FadB;
1-609 2.41e-113

fatty acid oxidation complex subunit alpha FadB;


Pssm-ID: 183293 [Multi-domain]  Cd Length: 715  Bit Score: 355.32  E-value: 2.41e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:PRK11730 112 YALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAEDALKVGAVDAVVAPE 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  81 PVEE-AIRFAQRVSDQPLE--SRRlcnKPIQS---LPNMDSIFSEALLKMR------RQHPgclAQEACVRAVQAAVQYP 148
Cdd:PRK11730 192 KLQEaALALLKQAIAGKLDwkARR---QPKLEplkLSKIEAMMSFTTAKGMvaqkagKHYP---APMTAVKTIEAAAGLG 265
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 149 YEVGIKKEEELFLYLLQSGQARALQYAFFAE----RKANKWStpsgaswktASARPVSSVGVVGLGTMGRGIVISFARAR 224
Cdd:PRK11730 266 RDEALELEAKGFVKLAKTNVARALVGIFLNDqyvkGKAKKLA---------KDAKPVKQAAVLGAGIMGGGIAYQSASKG 336
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 225 IPVIAVDSDKNQL----ATANKMITSVLEK---EASKMQQ---SGHPwsgpkprlTSSVKELGGVDLVIEAVFEEMSLKK 294
Cdd:PRK11730 337 VPVIMKDINQKALdlgmTEAAKLLNKQVERgkiDGAKMAGvlsSIRP--------TLDYAGFERVDVVVEAVVENPKVKA 408
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 295 QVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIG 374
Cdd:PRK11730 409 AVLAEVEQKVREDTILASNTSTISISLLAKALKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIATVVAYASKMGKTP 488
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 375 VVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLE-EFGFKMGPFRVSDLAGLDVGwksRKGQGLtgptLLPGTP 453
Cdd:PRK11730 489 IVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRQIDKVMEkQFGWPMGPAYLLDVVGIDTA---HHAQAV----MAEGFP 561
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 454 ARKRGNRRycPIPDVLCELGRFGQKTGKGWYQY--DKPlGRIHK-PDPWLSKFLsryrKTHHIEPRTISQDEILERCLYS 530
Cdd:PRK11730 562 DRMKKDYR--DAIDVLFEAKRFGQKNGKGFYRYeeDKK-GKPKKeVDPAVYELL----APVVQPKREFSDEEIIARMMIP 634
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 261878539 531 LINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNpdiPQLEPSDYLKKLASQG 609
Cdd:PRK11730 635 MINEVVRCLEEGIVASPAEADMALVYGLGFPPFRGGAFRYLDTLGVANYVALADKYAHLG---PLYQVPEGLREMAANG 710
FadB COG1250
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA ...
200-486 1.23e-103

3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA dehydrogenase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440862 [Multi-domain]  Cd Length: 281  Bit Score: 315.51  E-value: 1.23e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 200 PVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKmqqsgHPWSGPKP-------RLTSS 272
Cdd:COG1250    1 EIKKVAVIGAGTMGAGIAAVFANAGYEVVLLDISPEALERARARIAKLLDKLVKK-----GKLTEEEAdaalariTPTTD 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 273 VKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPS 352
Cdd:COG1250   76 LAALADADLVIEAVPEDLDLKQEVFAELDAVAPPDAILASNTSSLSITELAAATKRPERFIGLHFFNPVPLMPLVEVIRG 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 353 QYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGS-KPEEVDQVLEE-FGFKMGPFRVSDLAG 430
Cdd:COG1250  156 PATSDETVATAVAFARRLGKTPVVVKDTPGFIVNRILVPYLNEAIRLLEEGVaSPEDIDAAMRLgFGFPMGPFELADLVG 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 261878539 431 LDVGWKSRKgqgltgpTLLPGTPARKrgnRRYCPIPDVLCELGRFGQKTGKGWYQY 486
Cdd:COG1250  236 LDTALAVLE-------VLYEALGDPR---YRPPPLLKKLVEAGRLGRKTGRGFYDY 281
fa_ox_alpha_mit TIGR02441
fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of ...
4-610 2.26e-97

fatty acid oxidation complex, alpha subunit, mitochondrial; Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) _ 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human (SP:P40939), pig (SP:Q29554), and rat (SP:Q64428). The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).


Pssm-ID: 131494 [Multi-domain]  Cd Length: 737  Bit Score: 314.08  E-value: 2.26e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539    4 GGGLELALGCHYRIAHAEAQ--VGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-- 79
Cdd:TIGR02441 121 GGGLELALACHYRIATKDRKtlLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQLVDPlg 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   80 ---DPVEE---------AIRFAQRVSDQPLESRR---LCNKPIQSLPNM----DSIFSEALLKMRRQHPGCL-AQEACVR 139
Cdd:TIGR02441 201 pglKPAEEntieyleevAVKFAQGLANGKLSINRdkgLVHKITQYVMTNpfvrQQVYKTAEDKVMKQTKGLYpAPLKILD 280
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  140 AVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFA--ERKANKWSTPSgaswktasaRPVSSVGVVGLGTMGRGIV 217
Cdd:TIGR02441 281 VVRTGYDQGPDAGYEAESKAFGELSMTFESKALIGLFHGqtDCKKNKFGKPQ---------RPVKTLAVLGAGLMGAGIA 351
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  218 ISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQ 295
Cdd:TIGR02441 352 QVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLdySGFKNADMVIEAVFEDLSLKHK 431
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  296 VFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGV 375
Cdd:TIGR02441 432 VIKEVEAVVPPHCIIASNTSALPIKDIAAVSSRPEKVIGMHYFSPVDKMQLLEIITHDGTSKDTLASAVAVGLKQGKVVI 511
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  376 VVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGwkSRKGQGLtgptllpgtpAR 455
Cdd:TIGR02441 512 VVKDGPGFYTTRCLGPMLAEVIRLLQEGVDPKKLDKLTTKFGFPVGAATLADEVGVDVA--EHVAEDL----------GK 579
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  456 KRGNRRYCPIPDVLCEL---GRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKThhIEPRTISQDEILERCLYSLI 532
Cdd:TIGR02441 580 AFGERFGGGSAELLSELvkaGFLGRKSGKGIFIYQEGKKGSKKVNSDADEILAQYKLP--PKAEVSSPEDIQIRLVSRFV 657
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  533 NEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKY---YRQnpdipQLEPSDYLKKLASQG 609
Cdd:TIGR02441 658 NEAVLCLEEGILASPSEGDIGAVFGLGFPPFLGGPFRFVDLYGADKLVDKMEKYaaaYGV-----QFTPCQLLLDHAKSP 732

                  .
gi 261878539  610 N 610
Cdd:TIGR02441 733 G 733
3HCDH_N pfam02737
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda ...
203-380 1.54e-66

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda crystallin.


Pssm-ID: 397037 [Multi-domain]  Cd Length: 180  Bit Score: 215.48  E-value: 1.54e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  203 SVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRL--TSSVKELGGVD 280
Cdd:pfam02737   1 KVAVIGAGTMGAGIAQVFALAGLEVVLVDISEEALEKALERIESSLERLVEKGRITEEEVDAALARIsfTTDLAAAVDAD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  281 LVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTI 360
Cdd:pfam02737  81 LVIEAVPENLELKRKLFAELDAIAPPDAILATNTSSLSITELAAATKRPERFIGLHFFNPPPLMPLVEVVRGEKTSPETV 160
                         170       180
                  ....*....|....*....|
gi 261878539  361 ATVMNLSKKIKKIGVVVGNC 380
Cdd:pfam02737 161 ATTVELAKKIGKTPVVVKDT 180
PLN02545 PLN02545
3-hydroxybutyryl-CoA dehydrogenase
198-491 1.42e-62

3-hydroxybutyryl-CoA dehydrogenase


Pssm-ID: 215300 [Multi-domain]  Cd Length: 295  Bit Score: 209.20  E-value: 1.42e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 198 ARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGP--KPRLTSSVKE 275
Cdd:PLN02545   1 MAEIKKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATlgRIRCTTNLEE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 276 LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYS 355
Cdd:PLN02545  81 LRDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISITRLASATQRPQQVIGMHFMNPPPIMKLVEIIRGADT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 356 SPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLE-EFGFKMGPFRVSDLAGLDV 433
Cdd:PLN02545 161 SDEVFDATKALAERFGKTVVCSQDYPGFIVNRILMPMINEAFYALYTGvASKEDIDTGMKlGTNHPMGPLHLADFIGLDT 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 261878539 434 ------GWKSrkgqGLTGPTLLPgtparkrgnrryCPIPDVLCELGRFGQKTGKGWYQYDKPLG 491
Cdd:PLN02545 241 clsimkVLHE----GLGDSKYRP------------CPLLVQYVDAGRLGRKSGRGVYHYDGKKR 288
PRK05808 PRK05808
3-hydroxybutyryl-CoA dehydrogenase; Validated
201-486 5.17e-61

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 180269 [Multi-domain]  Cd Length: 282  Bit Score: 204.43  E-value: 5.17e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 201 VSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGG 278
Cdd:PRK05808   3 IQKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTdlDDLKD 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 279 VDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPT 358
Cdd:PRK05808  83 ADLVIEAATENMDLKKKIFAQLDEIAKPEAILATNTSSLSITELAAATKRPDKVIGMHFFNPVPVMKLVEIIRGLATSDA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 359 TIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEeFGFK--MGPFRVSDLAGLDVGW 435
Cdd:PRK05808 163 THEAVEALAKKIGKTPVEVKNAPGFVVNRILIPMINEAIFVLAEGvATAEDIDEGMK-LGCNhpIGPLALADLIGLDTCL 241
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 261878539 436 KSRKgqgltgpTLLPGTparkrGNRRYCPIPdVLCEL---GRFGQKTGKGWYQY 486
Cdd:PRK05808 242 AIME-------VLYEGF-----GDSKYRPCP-LLRKMvaaGWLGRKTGRGFYDY 282
PRK09260 PRK09260
3-hydroxyacyl-CoA dehydrogenase;
201-487 3.67e-54

3-hydroxyacyl-CoA dehydrogenase;


Pssm-ID: 236434 [Multi-domain]  Cd Length: 288  Bit Score: 186.53  E-value: 3.67e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 201 VSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEAS--KMQQSGHPWSGPKPRLTSSVKE-LG 277
Cdd:PRK09260   1 IEKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVArgKLTEAARQAALARLSYSLDLKAaVA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 278 GVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSP 357
Cdd:PRK09260  81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPTEIASFTKRPERVIAMHFFNPVHKMKLVELIRGLETSD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 358 TTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLE-EFGFKMGPFRVSDLagldVGW 435
Cdd:PRK09260 161 ETVQVAKEVAEQMGKETVVVNEFPGFVTSRISALVGNEAFYMLQEGvATAEDIDKAIRlGLNFPMGPLELGDL----VGL 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 261878539 436 KSRkgqgLTGPTLLPGTPARKrgnRRYCPIPDVLCELGRFGQKTGKGWYQYD 487
Cdd:PRK09260 237 DTR----LNNLKYLHETLGEK---YRPAPLLEKYVKAGRLGRKTGRGVYDYT 281
PRK06130 PRK06130
3-hydroxybutyryl-CoA dehydrogenase; Validated
200-486 4.34e-48

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 235707 [Multi-domain]  Cd Length: 311  Bit Score: 170.72  E-value: 4.34e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 200 PVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKmqqSGHPWSGPKPRLTSSVKE-LGG 278
Cdd:PRK06130   3 PIQNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPL---GIASAGMGRIRMEAGLAAaVSG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 279 VDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPT 358
Cdd:PRK06130  80 ADLVIEAVPEKLELKRDVFARLDGLCDPDTIFATNTSGLPITAIAQAVTRPERFVGTHFFTPADVIPLVEVVRGDKTSPQ 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 359 TIATVMNLSKKIKKIGVVVG-NCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLE-EFGFKM---GPFRVSDLAGLD 432
Cdd:PRK06130 160 TVATTMALLRSIGKRPVLVKkDIPGFIANRIQHALAREAISLLEKGvASAEDIDEVVKwSLGIRLaltGPLEQRDMNGLD 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 261878539 433 V--GWKSRKGQGLTGPTLLPGTPARKRgnrrycpipdvlcELGRFGQKTGKGWYQY 486
Cdd:PRK06130 240 VhlAVASYLYQDLENRTTPSPLLEEKV-------------EAGELGAKSGQGFYAW 282
PRK06035 PRK06035
3-hydroxyacyl-CoA dehydrogenase; Validated
201-432 1.12e-47

3-hydroxyacyl-CoA dehydrogenase; Validated


Pssm-ID: 180361 [Multi-domain]  Cd Length: 291  Bit Score: 168.90  E-value: 1.12e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 201 VSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITS-------VLEKeaSKMQQSGHPWSGPKPRLTSSV 273
Cdd:PRK06035   3 IKVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESgpyglrnLVEK--GKMSEDEAKAIMARIRTSTSY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 274 KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQ 353
Cdd:PRK06035  81 ESLSDADFIVEAVPEKLDLKRKVFAELERNVSPETIIASNTSGIMIAEIATALERKDRFIGMHWFNPAPVMKLIEVVRAA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 354 YSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLE-EFGFKMGPFRVSDLAGL 431
Cdd:PRK06035 161 LTSEETFNTTVELSKKIGKIPIEVADVPGFFTTRFIEGWLLEAIRSFEIGiATIKDIDEMCKlAFGFPMGPFELMDIIGI 240

                 .
gi 261878539 432 D 432
Cdd:PRK06035 241 D 241
PRK07819 PRK07819
3-hydroxybutyryl-CoA dehydrogenase; Validated
197-486 1.45e-46

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 181133 [Multi-domain]  Cd Length: 286  Bit Score: 165.93  E-value: 1.45e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 197 SARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEK--EASKMQQSGHPWSGPKPRLTSSVK 274
Cdd:PRK07819   1 MSDAIQRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERavSRGKLTERERDAALARLRFTTDLG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 275 ELGGVDLVIEAVFEEMSLKKQVFAELSA-VCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQ 353
Cdd:PRK07819  81 DFADRQLVIEAVVEDEAVKTEIFAELDKvVTDPDAVLASNTSSIPIMKLAAATKRPGRVLGLHFFNPVPVLPLVELVPTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 354 YSSPTTIATVMNL-SKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAG 430
Cdd:PRK07819 161 VTSEATVARAEEFaSDVLGKQVVRAQDRSGFVVNALLVPYLLSAIRMVESGfATAEDIDKAMVLgCAHPMGPLRLSDLVG 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 261878539 431 LD-------VGWKSRKGQGLTGPTLLpgtparkrgnRRycpipdvLCELGRFGQKTGKGWYQY 486
Cdd:PRK07819 241 LDtvkaiadSMYEEFKEPLYAPPPLL----------LR-------MVEAGLLGKKSGRGFYTY 286
PRK08268 PRK08268
3-hydroxy-acyl-CoA dehydrogenase; Validated
199-486 4.54e-46

3-hydroxy-acyl-CoA dehydrogenase; Validated


Pssm-ID: 236211 [Multi-domain]  Cd Length: 507  Bit Score: 170.41  E-value: 4.54e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 199 RPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLT--SSVKEL 276
Cdd:PRK08268   5 PSIATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRpvEALADL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 277 GGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSS 356
Cdd:PRK08268  85 ADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSITAIAAALKHPERVAGLHFFNPVPLMKLVEVVSGLATD 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 357 PTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVL-EEFGFKMGPFRVSDLAGLDVG 434
Cdd:PRK08268 165 PAVADALYALARAWGKTPVRAKDTPGFIVNRAARPYYTEALRVLEEGvADPATIDAILrEAAGFRMGPFELMDLIGLDVN 244
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 261878539 435 wksrkgqgltgptlLPGTPARKR---GNRRYCP--IPDVLCELGRFGQKTGKGWYQY 486
Cdd:PRK08268 245 --------------HAVMESVYRqfyQEPRFRPslIQQELVAAGRLGRKSGQGFYRY 287
PRK07530 PRK07530
3-hydroxybutyryl-CoA dehydrogenase; Validated
198-489 5.47e-42

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 181018 [Multi-domain]  Cd Length: 292  Bit Score: 153.62  E-value: 5.47e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 198 ARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEAS--KMQQSGHPWSGPKPRLTSSVKE 275
Cdd:PRK07530   1 MMAIKKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAkgKISEEARAAALARISTATDLED 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 276 LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYS 355
Cdd:PRK07530  81 LADCDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTSSISITRLASATDRPERFIGIHFMNPVPVMKLVELIRGIAT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 356 SPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLeEFG--FKMGPFRVSDLAGLD 432
Cdd:PRK07530 161 DEATFEAAKEFVTKLGKTITVAEDFPAFIVNRILLPMINEAIYTLYEGvGSVEAIDTAM-KLGanHPMGPLELADFIGLD 239
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 261878539 433 vgwksrkgqgltgpTLLP-------GTPARKrgnRRYCPIPDVLCELGRFGQKTGKGWYQY--DKP 489
Cdd:PRK07530 240 --------------TCLSimqvlhdGLADSK---YRPCPLLVKYVEAGWLGRKTGRGFYDYrgEVP 288
CaiD COG1024
Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Enoyl-CoA hydratase ...
1-181 5.06e-34

Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Enoyl-CoA hydratase/carnithine racemase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440647 [Multi-domain]  Cd Length: 249  Bit Score: 129.90  E-value: 5.06e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:COG1024  102 AALGGGLELALACDLRIAAEDARFGLPEVRLGLIPGGGGTQRLPRLVGLARAKELLLTGRRIDAEEALELGLVNRVVPDD 181
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  81 PV-EEAIRFAQRVSDQPLesrrlcnkpiqslpnmdsifseallkmrrqhpgcLAQEACVRAVQAAVQYPYEVGIKKEEEL 159
Cdd:COG1024  182 ELlAAALALAARLAAGPP----------------------------------LALAATKRALNAALEAPLDEALELEAEA 227
                        170       180
                 ....*....|....*....|..
gi 261878539 160 FLYLLQSGQARALQYAFFAERK 181
Cdd:COG1024  228 FAELFASEDAREGIAAFLEKRK 249
crotonase-like cd06558
Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse ...
1-92 5.53e-30

Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.


Pssm-ID: 119339 [Multi-domain]  Cd Length: 195  Bit Score: 116.89  E-value: 5.53e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:cd06558  103 AALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDE 182
                         90
                 ....*....|...
gi 261878539  81 -PVEEAIRFAQRV 92
Cdd:cd06558  183 eLLAAALELARRL 195
3HCDH pfam00725
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; This family also includes lambda ...
382-486 5.65e-30

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; This family also includes lambda crystallin. Some proteins include two copies of this domain.


Pssm-ID: 395588 [Multi-domain]  Cd Length: 97  Bit Score: 113.47  E-value: 5.65e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  382 GFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTllpgtparkrGN 459
Cdd:pfam00725   1 GFVVNRLLAPYLNEAIRLVEEGvATPEDIDAAMRLgLGLPMGPFELSDLVGLDVGYHILEVLAEEFGD----------RA 70
                          90       100
                  ....*....|....*....|....*..
gi 261878539  460 RRYCPIPDVLCELGRFGQKTGKGWYQY 486
Cdd:pfam00725  71 YRPPPLLEKLVEAGRLGRKTGKGFYKY 97
PRK07657 PRK07657
enoyl-CoA hydratase; Provisional
2-114 3.08e-27

enoyl-CoA hydratase; Provisional


Pssm-ID: 181069 [Multi-domain]  Cd Length: 260  Bit Score: 110.98  E-value: 3.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK07657 108 ALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEIGLVEFVVPAHL 187
                         90       100       110
                 ....*....|....*....|....*....|....
gi 261878539  82 VEE-AIRFAQRVSDQPLESRRLCNKPIQSLPNMD 114
Cdd:PRK07657 188 LEEkAIEIAEKIASNGPIAVRQAKEAISNGIQVD 221
PRK08293 PRK08293
3-hydroxyacyl-CoA dehydrogenase;
204-486 6.17e-27

3-hydroxyacyl-CoA dehydrogenase;


Pssm-ID: 181359 [Multi-domain]  Cd Length: 287  Bit Score: 110.80  E-value: 6.17e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 204 VGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMItsvlEKEASKMQQSGH-----PWSGPKPRL--TSSVKE- 275
Cdd:PRK08293   6 VTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERI----AKLADRYVRDLEatkeaPAEAALNRItlTTDLAEa 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 276 LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYS 355
Cdd:PRK08293  82 VKDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSSTLLPSQFAEATGRPEKFLALHFANEIWKNNTAEIMGHPGT 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 356 SPTTIATVMNLSKKIKKIGVVV-GNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQV-LEEFGFKMGPFRVSDLAGLD 432
Cdd:PRK08293 162 DPEVFDTVVAFAKAIGMVPIVLkKEQPGYILNSLLVPFLSAALALWAKGvADPETIDKTwMIATGAPMGPFGILDIVGLD 241
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 261878539 433 VGWKSRKGQgltgptllpgtpARKRGNRRYCPIPDVLCEL---GRFGQKTGKGWYQY 486
Cdd:PRK08293 242 TAYNITSNW------------AEATDDENAKKAAALLKEYidkGKLGVATGEGFYNY 286
PRK06129 PRK06129
3-hydroxyacyl-CoA dehydrogenase; Validated
200-428 8.04e-26

3-hydroxyacyl-CoA dehydrogenase; Validated


Pssm-ID: 235706 [Multi-domain]  Cd Length: 308  Bit Score: 108.21  E-value: 8.04e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 200 PVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHP--WSGPKPRLTSSVKE-L 276
Cdd:PRK06129   1 PMGSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEApdAVLARIRVTDSLADaV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 277 GGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSS 356
Cdd:PRK06129  81 ADADYVQESAPENLELKRALFAELDALAPPHAILASSTSALLASAFTEHLAGRERCLVAHPINPPYLIPVVEVVPAPWTA 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 261878539 357 PTTIATVMNLSKKIKKIGVVVGNCF-GFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFK---MGPFRVSDL 428
Cdd:PRK06129 161 PATLARAEALYRAAGQSPVRLRREIdGFVLNRLQGALLREAFRLVADGvASVDDIDAVIRDgLGLRwsfMGPFETIDL 238
PRK07658 PRK07658
enoyl-CoA hydratase; Provisional
2-183 1.43e-25

enoyl-CoA hydratase; Provisional


Pssm-ID: 181070 [Multi-domain]  Cd Length: 257  Bit Score: 106.26  E-value: 1.43e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVnsdP 81
Cdd:PRK07658 105 ALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNGVF---P 181
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  82 VEEAIRFAQRVsdqpleSRRLCNKPIQSLpnmdsifsEALLKMrrqhpgclaqeacvraVQAAVQYPYEVGIKKEEELFL 161
Cdd:PRK07658 182 EETLLDDAKKL------AKKIAGKSPATT--------RAVLEL----------------LQTTKSSSYYEGVKREAKIFG 231
                        170       180
                 ....*....|....*....|..
gi 261878539 162 YLLQSGQARALQYAFFAERKAN 183
Cdd:PRK07658 232 EVFTSEDAKEGVQAFLEKRKPS 253
PRK09076 PRK09076
enoyl-CoA hydratase; Provisional
2-187 2.91e-24

enoyl-CoA hydratase; Provisional


Pssm-ID: 236373 [Multi-domain]  Cd Length: 258  Bit Score: 102.30  E-value: 2.91e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-D 80
Cdd:PRK09076 106 AMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAATALRIGLVEEVVEKgE 185
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  81 PVEEAIRFAQRVSdqplesrrlcnkpiqslpnmdsifseallkmrRQHPGCLAqeACVRAVQAAVQYPYEVGIKKEEELF 160
Cdd:PRK09076 186 AREAALALAQKVA--------------------------------NQSPSAVA--ACKTLIQAARNGPRAAALALERELF 231
                        170       180
                 ....*....|....*....|....*..
gi 261878539 161 LYLLQSGQARALQYAFFAERKANkWST 187
Cdd:PRK09076 232 VDLFDTEDQREGVNAFLEKRAPQ-WKN 257
PRK08269 PRK08269
3-hydroxybutyryl-CoA dehydrogenase; Validated
212-487 1.24e-23

3-hydroxybutyryl-CoA dehydrogenase; Validated


Pssm-ID: 181340 [Multi-domain]  Cd Length: 314  Bit Score: 102.06  E-value: 1.24e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 212 MGRGIVISFARARIPVIAVDSDKNQ-------LATANKMITSVLEKEAS--KMQQSGHPWSGPKPRLTS---SVKELGGV 279
Cdd:PRK08269   1 MGQGIALAFAFAGHDVTLIDFKPRDaagwralDAEARAEIERTLAALVAlgRIDAAQADAVLARIAVVArdgAADALADA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 280 DLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTT 359
Cdd:PRK08269  81 DLVFEAVPEVLDAKREALRWLGRHVDADAIIASTTSTFLVTDLQRHVAHPERFLNAHWLNPAYLMPLVEVSPSDATDPAV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 360 IATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFK---MGPFRVSDLAGLDV- 433
Cdd:PRK08269 161 VDRLAALLERIGKVPVVCGPSPGYIVPRIQALAMNEAARMVEEGvASAEDIDKAIRTgFGLRfavLGLLEFIDWGGCDIl 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 261878539 434 GWKSRKGQGLTGPTllpgtparkrgnrRYCPiPDVL---CELGRFGQKTGKGWYQYD 487
Cdd:PRK08269 241 YYASRYLAGEIGPD-------------RFAP-PAIVvrnMEEGRDGLRTGAGFYDYA 283
PRK05809 PRK05809
short-chain-enoyl-CoA hydratase;
2-107 4.22e-22

short-chain-enoyl-CoA hydratase;


Pssm-ID: 180270 [Multi-domain]  Cd Length: 260  Bit Score: 96.35  E-value: 4.22e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVN-SD 80
Cdd:PRK05809 108 ALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAEEALRIGLVNKVVEpEK 187
                         90       100
                 ....*....|....*....|....*..
gi 261878539  81 PVEEAIRFAQRVSDQPLESRRLCNKPI 107
Cdd:PRK05809 188 LMEEAKALANKIAANAPIAVKLCKDAI 214
PRK06688 PRK06688
enoyl-CoA hydratase; Provisional
2-183 3.26e-21

enoyl-CoA hydratase; Provisional


Pssm-ID: 235852 [Multi-domain]  Cd Length: 259  Bit Score: 93.39  E-value: 3.26e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVnsdP 81
Cdd:PRK06688 107 AVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVV---P 183
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  82 VEEAIRFAQRVsdqpleSRRLCNKPiqslpnmdsifSEALLKMRrqhpgclaqeacvRAVQAAVQYPYEVGIKKEEELFL 161
Cdd:PRK06688 184 AAELDAEADAQ------AAKLAAGP-----------ASALRYTK-------------RAINAATLTELEEALAREAAGFG 233
                        170       180
                 ....*....|....*....|..
gi 261878539 162 YLLQSGQARALQYAFFAERKAN 183
Cdd:PRK06688 234 RLLRTPDFREGATAFIEKRKPD 255
PLN02600 PLN02600
enoyl-CoA hydratase
2-100 4.02e-21

enoyl-CoA hydratase


Pssm-ID: 178210 [Multi-domain]  Cd Length: 251  Bit Score: 92.94  E-value: 4.02e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-D 80
Cdd:PLN02600  99 ALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCVPAgE 178
                         90       100
                 ....*....|....*....|.
gi 261878539  81 PVEEAIRFAQRVSDQ-PLESR 100
Cdd:PLN02600 179 AYEKALELAQEINQKgPLAIK 199
PRK05862 PRK05862
enoyl-CoA hydratase; Provisional
2-126 1.29e-19

enoyl-CoA hydratase; Provisional


Pssm-ID: 180295 [Multi-domain]  Cd Length: 257  Bit Score: 88.95  E-value: 1.29e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK05862 105 ALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAEAERAGLVSRVVPADK 184
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 261878539  82 -VEEAIRFAQRVSDQPLESRRLCNKPIQSlpNMDSIFSEALLKMRR 126
Cdd:PRK05862 185 lLDEALAAATTIASFSLPAVMMAKEAVNR--AYETTLAEGLLFERR 228
ECH_1 pfam00378
Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: ...
2-96 4.46e-18

Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.


Pssm-ID: 395302 [Multi-domain]  Cd Length: 251  Bit Score: 84.33  E-value: 4.46e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539    2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:pfam00378  99 AIGGGCELALACDIIIAADNASFGLNETKLGIIPGAGGTDRLPRIIGHSKAMEMLLLGRRISAQEALKWGLVDKVVPEDQ 178
                          90
                  ....*....|....*.
gi 261878539   82 V-EEAIRFAQRVSDQP 96
Cdd:pfam00378 179 LlDEARELAEKLAEKS 194
PRK09674 PRK09674
enoyl-CoA hydratase-isomerase; Provisional
2-100 3.54e-17

enoyl-CoA hydratase-isomerase; Provisional


Pssm-ID: 182026 [Multi-domain]  Cd Length: 255  Bit Score: 81.74  E-value: 3.54e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD- 80
Cdd:PRK09674 103 ALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPEl 182
                         90       100
                 ....*....|....*....|.
gi 261878539  81 PVEEAIRFAQRVSDQ-PLESR 100
Cdd:PRK09674 183 TLERALQLASKIARHsPLALR 203
PRK06494 PRK06494
enoyl-CoA hydratase; Provisional
2-99 4.33e-17

enoyl-CoA hydratase; Provisional


Pssm-ID: 180591 [Multi-domain]  Cd Length: 259  Bit Score: 81.63  E-value: 4.33e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVnsdP 81
Cdd:PRK06494 105 AMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVV---P 181
                         90
                 ....*....|....*...
gi 261878539  82 VEEAIRFAQRVSDQPLES 99
Cdd:PRK06494 182 AGELLAAAERWADDILAC 199
PRK08138 PRK08138
enoyl-CoA hydratase; Provisional
2-96 2.54e-16

enoyl-CoA hydratase; Provisional


Pssm-ID: 236162 [Multi-domain]  Cd Length: 261  Bit Score: 79.33  E-value: 2.54e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV-NSD 80
Cdd:PRK08138 109 ALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVeDEQ 188
                         90
                 ....*....|....*.
gi 261878539  81 PVEEAIRFAQRVSDQP 96
Cdd:PRK08138 189 TLPRALELAREIARMP 204
PRK03580 PRK03580
crotonobetainyl-CoA hydratase;
1-96 3.03e-15

crotonobetainyl-CoA hydratase;


Pssm-ID: 179599 [Multi-domain]  Cd Length: 261  Bit Score: 75.89  E-value: 3.03e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:PRK03580 104 YAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQA 183
                         90
                 ....*....|....*..
gi 261878539  81 PVEEAIR-FAQRVSDQP 96
Cdd:PRK03580 184 ELMDRAReLAQQLVNSA 200
PRK07509 PRK07509
crotonase/enoyl-CoA hydratase family protein;
2-105 1.10e-14

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 181008 [Multi-domain]  Cd Length: 262  Bit Score: 74.53  E-value: 1.10e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVnSDP 81
Cdd:PRK07509 113 CFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVFSAEEALELGLVTHVS-DDP 191
                         90       100
                 ....*....|....*....|....*...
gi 261878539  82 VEEAIRFAQRVS----DQPLESRRLCNK 105
Cdd:PRK07509 192 LAAALALAREIAqrspDAIAAAKRLINR 219
PRK05869 PRK05869
enoyl-CoA hydratase; Validated
2-98 7.91e-14

enoyl-CoA hydratase; Validated


Pssm-ID: 235632 [Multi-domain]  Cd Length: 222  Bit Score: 71.02  E-value: 7.91e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK05869 110 ALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEEALALGLIDEMVAPDD 189
                         90
                 ....*....|....*...
gi 261878539  82 V-EEAIRFAQRVSDQPLE 98
Cdd:PRK05869 190 VyDAAAAWARRFLDGPPH 207
PRK06127 PRK06127
enoyl-CoA hydratase; Provisional
3-87 1.06e-13

enoyl-CoA hydratase; Provisional


Pssm-ID: 235705  Cd Length: 269  Bit Score: 71.66  E-value: 1.06e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   3 FGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPV 82
Cdd:PRK06127 118 IGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAAEALRIGLVHRVTAADDL 197

                 ....*
gi 261878539  83 EEAIR 87
Cdd:PRK06127 198 ETALA 202
PRK05980 PRK05980
crotonase/enoyl-CoA hydratase family protein;
1-92 1.80e-13

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 180335 [Multi-domain]  Cd Length: 260  Bit Score: 70.94  E-value: 1.80e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV-NS 79
Cdd:PRK05980 110 LAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLVNAVVpHE 189
                         90
                 ....*....|...
gi 261878539  80 DPVEEAIRFAQRV 92
Cdd:PRK05980 190 ELLPAARALARRI 202
PRK08252 PRK08252
crotonase/enoyl-CoA hydratase family protein;
2-185 2.75e-13

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 181325 [Multi-domain]  Cd Length: 254  Bit Score: 70.02  E-value: 2.75e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-D 80
Cdd:PRK08252 102 ALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPgQ 181
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  81 PVEEAIRFAQRVSDqplesrrlcNKPiqslpnmdsifseallkmrrqhpgcLAQEACVRAVQAAVQYPYEVGIKKEEELF 160
Cdd:PRK08252 182 ALDAALELAERIAA---------NGP-------------------------LAVAASKRIVVESGDWSEDEMFARQRELI 227
                        170       180
                 ....*....|....*....|....*
gi 261878539 161 LYLLQSGQARALQYAfFAERKANKW 185
Cdd:PRK08252 228 APVFTSADAKEGATA-FAEKRAPVW 251
PRK08150 PRK08150
crotonase/enoyl-CoA hydratase family protein;
4-121 2.79e-13

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 181254  Cd Length: 255  Bit Score: 70.05  E-value: 2.79e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV-NSDPV 82
Cdd:PRK08150 105 GGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVpAGEAL 184
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 261878539  83 EEAIRFAQRV-SDQPLESRRLCNK-P-IQSLPNMDSIFSEAL 121
Cdd:PRK08150 185 DKAMELARRIaQNAPLTNFAVLNAlPrIADMSADDGLFVESL 226
PRK06143 PRK06143
enoyl-CoA hydratase; Provisional
4-87 9.88e-13

enoyl-CoA hydratase; Provisional


Pssm-ID: 180423  Cd Length: 256  Bit Score: 68.52  E-value: 9.88e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGlLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVE 83
Cdd:PRK06143 113 GGGLELAAACDLRIAAHDAQFGMPEVRVG-IPSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVVPLAELD 191

                 ....
gi 261878539  84 EAIR 87
Cdd:PRK06143 192 AAVE 195
PRK09245 PRK09245
crotonase/enoyl-CoA hydratase family protein;
2-105 3.74e-12

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 181723  Cd Length: 266  Bit Score: 66.92  E-value: 3.74e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK09245 114 AIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEWGLVSRVVPADQ 193
                         90       100
                 ....*....|....*....|....*
gi 261878539  82 -VEEAIRFAQRVSDQPLESRRLCNK 105
Cdd:PRK09245 194 lLPAARALAERIAANPPHALRLTKR 218
PRK08259 PRK08259
crotonase/enoyl-CoA hydratase family protein;
2-96 1.23e-11

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 236205  Cd Length: 254  Bit Score: 65.30  E-value: 1.23e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEA-------QVGLPevtlgLLPGarGTQLLPRLTGVPAALDLITSGRRILADEALKLGILD 74
Cdd:PRK08259 104 AVAGGLELALWCDLRVAEEDAvfgvfcrRWGVP-----LIDG--GTVRLPRLIGHSRAMDLILTGRPVDADEALAIGLAN 176
                         90       100
                 ....*....|....*....|...
gi 261878539  75 KVVNS-DPVEEAIRFAQRVSDQP 96
Cdd:PRK08259 177 RVVPKgQARAAAEELAAELAAFP 199
PRK07066 PRK07066
L-carnitine dehydrogenase;
201-452 2.53e-11

L-carnitine dehydrogenase;


Pssm-ID: 168796 [Multi-domain]  Cd Length: 321  Bit Score: 65.24  E-value: 2.53e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 201 VSSVGVVGLGTMGRGIVisfARAR---IPVIAVDSDKNqlatANKMITSVLEKEASKMQQSG-HPWSGP-KPRLTSSVKE 275
Cdd:PRK07066   7 IKTFAAIGSGVIGSGWV---ARALahgLDVVAWDPAPG----AEAALRANVANAWPALERQGlAPGASPaRLRFVATIEA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 276 -LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQY 354
Cdd:PRK07066  80 cVADADFIQESAPEREALKLELHERISRAAKPDAIIASSTSGLLPTDFYARATHPERCVVGHPFNPVYLLPLVEVLGGER 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 355 SSPTTIATVMNLskkIKKIGV----VVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLeEFGFK-----MGPFR 424
Cdd:PRK07066 160 TAPEAVDAAMGI---YRALGMrplhVRKEVPGFIADRLLEALWREALHLVNEGvATTGEIDDAI-RFGAGirwsfMGTFL 235
                        250       260
                 ....*....|....*....|....*....
gi 261878539 425 VSDLAGLDVGWKSRKGQglTGPTL-LPGT 452
Cdd:PRK07066 236 TYTLAGGDAGMRHFMQQ--FGPALeLPWT 262
PRK07659 PRK07659
enoyl-CoA hydratase; Provisional
2-128 2.61e-11

enoyl-CoA hydratase; Provisional


Pssm-ID: 236073 [Multi-domain]  Cd Length: 260  Bit Score: 64.28  E-value: 2.61e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK07659 109 AAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLIDEVIGGDF 188
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 261878539  82 VEEAIRFAQRVSDQPLES-----RRLCNKPIQSLPNMDSIFSEALLKMRRQH 128
Cdd:PRK07659 189 QTAAKQKISEWLQKPLKAmietkQIYCELNRSQLEQVLQLEKRAQYAMRQTA 240
PRK08788 PRK08788
enoyl-CoA hydratase; Validated
2-87 4.12e-11

enoyl-CoA hydratase; Validated


Pssm-ID: 236338  Cd Length: 287  Bit Score: 64.16  E-value: 4.12e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK08788 132 ALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQ 211

                 ....*.
gi 261878539  82 VEEAIR 87
Cdd:PRK08788 212 GEAAVR 217
PRK06190 PRK06190
enoyl-CoA hydratase; Provisional
2-101 5.03e-11

enoyl-CoA hydratase; Provisional


Pssm-ID: 235733  Cd Length: 258  Bit Score: 63.45  E-value: 5.03e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV-NSD 80
Cdd:PRK06190 105 AVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGLVTEVVpHDE 184
                         90       100
                 ....*....|....*....|.
gi 261878539  81 PVEEAIRFAQRVSDQPLESRR 101
Cdd:PRK06190 185 LLPRARRLAASIAGNNPAAVR 205
PRK06210 PRK06210
enoyl-CoA hydratase; Provisional
4-95 5.95e-11

enoyl-CoA hydratase; Provisional


Pssm-ID: 180472  Cd Length: 272  Bit Score: 63.57  E-value: 5.95e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPV- 82
Cdd:PRK06210 121 GIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELm 200
                         90
                 ....*....|...
gi 261878539  83 EEAIRFAQRVSDQ 95
Cdd:PRK06210 201 ERTLAYAEDLARN 213
PRK07468 PRK07468
crotonase/enoyl-CoA hydratase family protein;
2-86 9.26e-11

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 180987 [Multi-domain]  Cd Length: 262  Bit Score: 62.77  E-value: 9.26e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRlTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK07468 111 AFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEANARRVFMSARLFDAEEAVRLGLLSRVVPAER 189

                 ....*
gi 261878539  82 VEEAI 86
Cdd:PRK07468 190 LDAAV 194
PRK06023 PRK06023
crotonase/enoyl-CoA hydratase family protein;
1-176 1.54e-08

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 168351  Cd Length: 251  Bit Score: 55.95  E-value: 1.54e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:PRK06023 107 LAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEAAQEAGLIWKIVDEE 186
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  81 PVE-EAIRFAQRVSDQPLESRRLcnkpiqslpnmdsifSEALLKMRRQHpgCLAQeacvravqaavqypyevgIKKEEEL 159
Cdd:PRK06023 187 AVEaETLKAAEELAAKPPQALQI---------------ARDLMRGPRED--ILAR------------------IDEEAKH 231
                        170
                 ....*....|....*..
gi 261878539 160 FLYLLQSGQARALQYAF 176
Cdd:PRK06023 232 FAARLKSAEARAAFEAF 248
PRK08260 PRK08260
enoyl-CoA hydratase; Provisional
2-95 1.70e-08

enoyl-CoA hydratase; Provisional


Pssm-ID: 236206 [Multi-domain]  Cd Length: 296  Bit Score: 56.17  E-value: 1.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK08260 124 AVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDE 203
                         90
                 ....*....|....*
gi 261878539  82 -VEEAIRFAQRVSDQ 95
Cdd:PRK08260 204 lLPAARALAREIADN 218
PRK05870 PRK05870
enoyl-CoA hydratase; Provisional
2-98 1.88e-08

enoyl-CoA hydratase; Provisional


Pssm-ID: 180298  Cd Length: 249  Bit Score: 55.50  E-value: 1.88e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNsDP 81
Cdd:PRK05870 106 AVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLALMVAD-DP 184
                         90
                 ....*....|....*..
gi 261878539  82 VEEAIRFAQRVSDQPLE 98
Cdd:PRK05870 185 VAAALELAAGPAAAPRE 201
3HCDH pfam00725
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; This family also includes lambda ...
523-614 2.91e-08

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; This family also includes lambda crystallin. Some proteins include two copies of this domain.


Pssm-ID: 395588 [Multi-domain]  Cd Length: 97  Bit Score: 51.83  E-value: 2.91e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539  523 ILERCLYSLINEAFRILGEGIaASPEHIDVVYLHGYGWPRhkgGPMFYASTVGLPTVLEKLQKYYRQNPDiPQLEPSDYL 602
Cdd:pfam00725   3 VVNRLLAPYLNEAIRLVEEGV-ATPEDIDAAMRLGLGLPM---GPFELSDLVGLDVGYHILEVLAEEFGD-RAYRPPPLL 77
                          90
                  ....*....|..
gi 261878539  603 KKLASQGNPPLK 614
Cdd:pfam00725  78 EKLVEAGRLGRK 89
PRK07799 PRK07799
crotonase/enoyl-CoA hydratase family protein;
2-93 4.37e-08

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 181122 [Multi-domain]  Cd Length: 263  Bit Score: 54.72  E-value: 4.37e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV-NSD 80
Cdd:PRK07799 111 AIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHVVpDGQ 190
                         90
                 ....*....|...
gi 261878539  81 PVEEAIRFAQRVS 93
Cdd:PRK07799 191 ALDKALELAELIN 203
PLN03214 PLN03214
probable enoyl-CoA hydratase/isomerase; Provisional
5-100 1.03e-07

probable enoyl-CoA hydratase/isomerase; Provisional


Pssm-ID: 215635  Cd Length: 278  Bit Score: 53.73  E-value: 1.03e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   5 GGLELALGCHYRIAHAEAQVGLPEVTLGL-LPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP-V 82
Cdd:PLN03214 121 GGCAVSLCCDYRLQTTEGTMGLNEVALGIpVPKFWARLFMGRVIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAAAlM 200
                         90
                 ....*....|....*...
gi 261878539  83 EEAIRFAQRVSDQPLESR 100
Cdd:PLN03214 201 EAAASAMERALKLPSAAR 218
PRK05995 PRK05995
enoyl-CoA hydratase; Provisional
2-122 1.27e-07

enoyl-CoA hydratase; Provisional


Pssm-ID: 235664 [Multi-domain]  Cd Length: 262  Bit Score: 53.39  E-value: 1.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPgargTQLLP---RLTGVPAALDLITSGRRILADEALKLGILDKVVN 78
Cdd:PRK05995 110 AYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIP----ATISPyviRAMGERAARRYFLTAERFDAAEALRLGLVHEVVP 185
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 261878539  79 SDPVEEAI-RFAQRVSDQPLESRRLCNKPIQSLPNMDsiFSEALL 122
Cdd:PRK05995 186 AEALDAKVdELLAALVANSPQAVRAGKRLVRDVAGRP--IDAALI 228
PRK06072 PRK06072
enoyl-CoA hydratase; Provisional
4-105 1.40e-07

enoyl-CoA hydratase; Provisional


Pssm-ID: 168377 [Multi-domain]  Cd Length: 248  Bit Score: 52.86  E-value: 1.40e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVpAALDLITSGRRILADEALKLGILDkvVNSDPVE 83
Cdd:PRK06072 102 GACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQ-RFYEILVLGGEFTAEEAERWGLLK--ISEDPLS 178
                         90       100
                 ....*....|....*....|....*.
gi 261878539  84 EAIRFAQRVSDQPLES----RRLCNK 105
Cdd:PRK06072 179 DAEEMANRISNGPFQSyiaaKRMINL 204
PRK05864 PRK05864
enoyl-CoA hydratase; Provisional
2-93 2.15e-07

enoyl-CoA hydratase; Provisional


Pssm-ID: 168278 [Multi-domain]  Cd Length: 276  Bit Score: 52.91  E-value: 2.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQV-------GLPEVTLGLlpgargTQLLPRLTGVPAALDLITSGRRILADEALKLGILD 74
Cdd:PRK05864 120 AIGGGLCLALAADIRVASSSAYFraaginnGLTASELGL------SYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLVS 193
                         90       100
                 ....*....|....*....|
gi 261878539  75 -KVVNSDPVEEAIRFAQRVS 93
Cdd:PRK05864 194 rQVPDEQLLDTCYAIAARMA 213
PRK06495 PRK06495
enoyl-CoA hydratase/isomerase family protein;
2-101 2.82e-07

enoyl-CoA hydratase/isomerase family protein;


Pssm-ID: 168580 [Multi-domain]  Cd Length: 257  Bit Score: 52.00  E-value: 2.82e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQllpRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK06495 108 ALGAGLGLVASCDIIVASENAVFGLPEIDVGLAGGGKHAM---RLFGHSLTRRMMLTGYRVPAAELYRRGVIEACLPPEE 184
                         90       100
                 ....*....|....*....|..
gi 261878539  82 -VEEAIRFAQRV-SDQPLESRR 101
Cdd:PRK06495 185 lMPEAMEIAREIaSKSPLATRL 206
PRK06144 PRK06144
enoyl-CoA hydratase; Provisional
2-93 3.01e-07

enoyl-CoA hydratase; Provisional


Pssm-ID: 180424 [Multi-domain]  Cd Length: 262  Bit Score: 52.30  E-value: 3.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEV-TLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:PRK06144 113 CVGGGAAIAAACDLRIATPSARFGFPIArTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEAEEALAAGLVNEVVEDA 192
                         90
                 ....*....|....
gi 261878539  81 PVE-EAIRFAQRVS 93
Cdd:PRK06144 193 ALDaRADALAELLA 206
ECH_2 pfam16113
Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: ...
4-136 3.69e-06

Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from pfam00378 in the structure of it's C-terminus.


Pssm-ID: 465024 [Multi-domain]  Cd Length: 331  Bit Score: 49.39  E-value: 3.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539    4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRL---TGVPAALdlitSGRRILADEALKLGILDKVVNSD 80
Cdd:pfam16113 101 GGGVGLSVHGSFRVVTERTRFAMPETAIGLFPDVGGSYFLSRLpgeLGLYLAL----TGARLNGADALAAGLATHYVPSA 176
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 261878539   81 PVEEairfaqrvsdqpLESrRLCNKPIQSLPNMDSIFsEALLKMRRQHPGCLAQEA 136
Cdd:pfam16113 177 RLPA------------LEE-ALAALDWSDPADVDAVL-AEFAEESDPPPSPLAAHR 218
PRK08140 PRK08140
enoyl-CoA hydratase; Provisional
2-96 6.39e-06

enoyl-CoA hydratase; Provisional


Pssm-ID: 236163  Cd Length: 262  Bit Score: 47.99  E-value: 6.39e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK08140 110 AAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQAEQWGLIWRVVDDAA 189
                         90
                 ....*....|....*.
gi 261878539  82 V-EEAIRFAQRVSDQP 96
Cdd:PRK08140 190 LaDEAQQLAAHLATQP 205
PRK08258 PRK08258
enoyl-CoA hydratase family protein;
1-96 9.57e-06

enoyl-CoA hydratase family protein;


Pssm-ID: 181329  Cd Length: 277  Bit Score: 47.65  E-value: 9.57e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   1 MAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGT-QLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS 79
Cdd:PRK08258 123 VCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGAcALLPRIIGQGRASELLYTGRSMSAEEGERWGFFNRLVEP 202
                         90
                 ....*....|....*...
gi 261878539  80 DPV-EEAIRFAQRVSDQP 96
Cdd:PRK08258 203 EELlAEAQALARRLAAGP 220
PLN02664 PLN02664
enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
4-87 1.69e-05

enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase


Pssm-ID: 178269 [Multi-domain]  Cd Length: 275  Bit Score: 46.82  E-value: 1.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-DPV 82
Cdd:PLN02664 124 GGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVSRVFGSkEDL 203

                 ....*
gi 261878539  83 EEAIR 87
Cdd:PLN02664 204 DEGVR 208
PRK05981 PRK05981
enoyl-CoA hydratase/isomerase;
2-96 1.98e-05

enoyl-CoA hydratase/isomerase;


Pssm-ID: 235661  Cd Length: 266  Bit Score: 46.65  E-value: 1.98e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK05981 114 AAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWGLVNRVVDDAE 193
                         90
                 ....*....|....*.
gi 261878539  82 V-EEAIRFAQRVSDQP 96
Cdd:PRK05981 194 LmAEAMKLAHELANGP 209
PRK09120 PRK09120
p-hydroxycinnamoyl CoA hydratase/lyase; Validated
2-87 2.34e-05

p-hydroxycinnamoyl CoA hydratase/lyase; Validated


Pssm-ID: 236383  Cd Length: 275  Bit Score: 46.54  E-value: 2.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK09120 115 CFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVNESVPLAQ 194

                 ....*.
gi 261878539  82 VEEAIR 87
Cdd:PRK09120 195 LRARTR 200
PRK06563 PRK06563
crotonase/enoyl-CoA hydratase family protein;
6-97 5.61e-05

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 180625 [Multi-domain]  Cd Length: 255  Bit Score: 45.34  E-value: 5.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   6 GLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS-DPVEE 84
Cdd:PRK06563 107 GIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQEALRLGLVQEVVPPgEQLER 186
                         90
                 ....*....|....
gi 261878539  85 AIRFAQRVSDQ-PL 97
Cdd:PRK06563 187 AIELAERIARAaPL 200
PLN02740 PLN02740
Alcohol dehydrogenase-like
186-403 1.52e-04

Alcohol dehydrogenase-like


Pssm-ID: 178341 [Multi-domain]  Cd Length: 381  Bit Score: 44.40  E-value: 1.52e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 186 STPSGASWKTASARPVSSVGVVGLGTMGRGiVISFARAR--IPVIAVDSDKNQLATANKM-ITSVLEKEASKmqqsghpw 262
Cdd:PLN02740 184 STGVGAAWNTANVQAGSSVAIFGLGAVGLA-VAEGARARgaSKIIGVDINPEKFEKGKEMgITDFINPKDSD-------- 254
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 263 sgpKPrLTSSVKEL--GGVDLVIEAVFEEMSLKkqvfaelsavckpEAFLCTNtsaldvDEIASStdrphLVIGTHF--- 337
Cdd:PLN02740 255 ---KP-VHERIREMtgGGVDYSFECAGNVEVLR-------------EAFLSTH------DGWGLT-----VLLGIHPtpk 306
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 261878539 338 FSPAHVMKLLE---VIPSQYSSPTTIATVMNLSKKIKKiGVVvgNCFGFVGNRMLNPYYNQAYFLLEEG 403
Cdd:PLN02740 307 MLPLHPMELFDgrsITGSVFGDFKGKSQLPNLAKQCMQ-GVV--NLDGFITHELPFEKINEAFQLLEDG 372
liver_ADH_like1 cd08281
Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase); ...
187-286 1.79e-04

Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase); NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.


Pssm-ID: 176241 [Multi-domain]  Cd Length: 371  Bit Score: 44.29  E-value: 1.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 187 TPSGASWKTASARPVSSVGVVGLGTMG----RGIVISFARariPVIAVD--SDKNQLATANKMITSVLEKEASKMQQsgh 260
Cdd:cd08281  178 TGVGAVVNTAGVRPGQSVAVVGLGGVGlsalLGAVAAGAS---QVVAVDlnEDKLALARELGATATVNAGDPNAVEQ--- 251
                         90       100
                 ....*....|....*....|....*...
gi 261878539 261 pwsgpkprltssVKEL--GGVDLVIEAV 286
Cdd:cd08281  252 ------------VRELtgGGVDYAFEMA 267
PRK05617 PRK05617
3-hydroxyisobutyryl-CoA hydrolase; Provisional
4-100 2.61e-04

3-hydroxyisobutyryl-CoA hydrolase; Provisional


Pssm-ID: 235533 [Multi-domain]  Cd Length: 342  Bit Score: 43.66  E-value: 2.61e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRL---TGVPAALdlitSGRRILADEALKLGILDKVVNSD 80
Cdd:PRK05617 113 GGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRApgaLGTYLAL----TGARISAADALYAGLADHFVPSA 188
                         90       100
                 ....*....|....*....|
gi 261878539  81 PVEEairFAQRVSDQPLESR 100
Cdd:PRK05617 189 DLPA---LLDALISLRWDSG 205
PRK11423 PRK11423
methylmalonyl-CoA decarboxylase; Provisional
2-127 3.59e-04

methylmalonyl-CoA decarboxylase; Provisional


Pssm-ID: 236908 [Multi-domain]  Cd Length: 261  Bit Score: 42.71  E-value: 3.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDP 81
Cdd:PRK11423 107 VWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVVEVEE 186
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 261878539  82 VEEAIR-FAQRVSDQ-PL------ESRRLcnkpIQSLPNMDSIFSEALLKMRRQ 127
Cdd:PRK11423 187 LEDFTLqMAHHISEKaPLaiavikEQLRV----LGEAHPMNPDEFERIQGLRRA 236
PRK08290 PRK08290
enoyl-CoA hydratase; Provisional
5-96 5.98e-04

enoyl-CoA hydratase; Provisional


Pssm-ID: 236220 [Multi-domain]  Cd Length: 288  Bit Score: 42.26  E-value: 5.98e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   5 GGLELALGCHYRIAHAEAQVGLPEVTLGLlPG----ARGTQLLPRltgvpAALDLITSGRRILADEALKLGILDKVVNSD 80
Cdd:PRK08290 132 GGLMLAWVCDLIVASDDAFFSDPVVRMGI-PGveyfAHPWELGPR-----KAKELLFTGDRLTADEAHRLGMVNRVVPRD 205
                         90
                 ....*....|....*..
gi 261878539  81 PVE-EAIRFAQRVSDQP 96
Cdd:PRK08290 206 ELEaETLELARRIAAMP 222
liver_alcohol_DH_like cd08277
Liver alcohol dehydrogenase; NAD(P)(H)-dependent oxidoreductases are the major enzymes in the ...
186-284 1.34e-03

Liver alcohol dehydrogenase; NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.


Pssm-ID: 176238 [Multi-domain]  Cd Length: 365  Bit Score: 41.56  E-value: 1.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 186 STPSGASWKTASARPVSSVGVVGLGTMGRGiVISFAR----ARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQsghp 261
Cdd:cd08277  170 STGYGAAWNTAKVEPGSTVAVFGLGAVGLS-AIMGAKiagaSRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVS---- 244
                         90       100
                 ....*....|....*....|....*
gi 261878539 262 wsgpkprltSSVKEL--GGVDLVIE 284
Cdd:cd08277  245 ---------EVIREMtgGGVDYSFE 260
FDH_like_ADH2 cd08286
formaldehyde dehydrogenase (FDH)-like; This group is related to formaldehyde dehydrogenase ...
199-286 2.68e-03

formaldehyde dehydrogenase (FDH)-like; This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.


Pssm-ID: 176246 [Multi-domain]  Cd Length: 345  Bit Score: 40.31  E-value: 2.68e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 199 RPVSSVGVVGLGTMGRGIVISfARARIP--VIAVDSDKNQLATANKMITSvlekeaskmqqsgHPWSGPKPRLTSSVKEL 276
Cdd:cd08286  165 KPGDTVAIVGAGPVGLAALLT-AQLYSPskIIMVDLDDNRLEVAKKLGAT-------------HTVNSAKGDAIEQVLEL 230
                         90
                 ....*....|...
gi 261878539 277 ---GGVDLVIEAV 286
Cdd:cd08286  231 tdgRGVDVVIEAV 243
PLN02267 PLN02267
enoyl-CoA hydratase/isomerase family protein
2-93 3.51e-03

enoyl-CoA hydratase/isomerase family protein


Pssm-ID: 215151  Cd Length: 239  Bit Score: 39.70  E-value: 3.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQV-GLPEVTLGLLPGARGTQLLPRLTGVPAAL-DLITSGRRILADEALKLGILDKVVNS 79
Cdd:PLN02267 105 ASAAGFILALSHDYVLMRKDRGVlYMSEVDIGLPLPDYFMALLRAKIGSPAARrDVLLRAAKLTAEEAVEMGIVDSAHDS 184
                         90
                 ....*....|....*.
gi 261878539  80 --DPVEEAIRFAQRVS 93
Cdd:PLN02267 185 aeETVEAAVRLGEELA 200
PRK07827 PRK07827
enoyl-CoA hydratase family protein;
4-107 4.65e-03

enoyl-CoA hydratase family protein;


Pssm-ID: 236109 [Multi-domain]  Cd Length: 260  Bit Score: 39.28  E-value: 4.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   4 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITsGRRILADEALKLGILdkVVNSDPVE 83
Cdd:PRK07827 114 AGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAARYYLT-GEKFGAAEAARIGLV--TAAADDVD 190
                         90       100
                 ....*....|....*....|....*....
gi 261878539  84 EAI-RFA---QRVSDQPL-ESRRLCNKPI 107
Cdd:PRK07827 191 AAVaALLadlRRGSPQGLaESKALTTAAV 219
alcohol_DH_plants cd08301
Plant alcohol dehydrogenase; NAD(P)(H)-dependent oxidoreductases are the major enzymes in the ...
186-243 5.29e-03

Plant alcohol dehydrogenase; NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.


Pssm-ID: 176261 [Multi-domain]  Cd Length: 369  Bit Score: 39.59  E-value: 5.29e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 186 STPSGASWKTASARPVSSVGVVGLGTMGRGiVISFARAR--IPVIAVDSDKNQLATANKM 243
Cdd:cd08301  173 STGLGAAWNVAKVKKGSTVAIFGLGAVGLA-VAEGARIRgaSRIIGVDLNPSKFEQAKKF 231
alcohol_DH_class_III cd08300
class III alcohol dehydrogenases; Members identified as glutathione-dependent formaldehyde ...
186-243 5.34e-03

class III alcohol dehydrogenases; Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.


Pssm-ID: 176260 [Multi-domain]  Cd Length: 368  Bit Score: 39.52  E-value: 5.34e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 261878539 186 STPSGASWKTASARPVSSVGVVGLGTMGRGiVISFARA----RIpvIAVDSDKNQLATANKM 243
Cdd:cd08300  172 TTGYGAVLNTAKVEPGSTVAVFGLGAVGLA-VIQGAKAagasRI--IGIDINPDKFELAKKF 230
PLN02888 PLN02888
enoyl-CoA hydratase
2-95 8.22e-03

enoyl-CoA hydratase


Pssm-ID: 215480  Cd Length: 265  Bit Score: 38.58  E-value: 8.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539   2 AFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVnsDP 81
Cdd:PLN02888 110 AITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWGLVNHVV--EE 187
                         90
                 ....*....|....
gi 261878539  82 vEEAIRFAQRVSDQ 95
Cdd:PLN02888 188 -SELLKKAREVAEA 200
Zn_ADH10 cd08263
Alcohol dehydrogenases of the MDR family; NAD(P)(H)-dependent oxidoreductases are the major ...
187-286 9.54e-03

Alcohol dehydrogenases of the MDR family; NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.


Pssm-ID: 176224 [Multi-domain]  Cd Length: 367  Bit Score: 38.51  E-value: 9.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261878539 187 TPSGASWKTASARPVSSVGVVGLGTMGRGIV-ISFARARIPVIAVDSDKNQLATANKMITSvlekeaskmqqsgHPWSGP 265
Cdd:cd08263  174 TAYGALKHAADVRPGETVAVIGVGGVGSSAIqLAKAFGASPIIAVDVRDEKLAKAKELGAT-------------HTVNAA 240
                         90       100
                 ....*....|....*....|....
gi 261878539 266 KPRLTSSVKEL---GGVDLVIEAV 286
Cdd:cd08263  241 KEDAVAAIREItggRGVDVVVEAL 264
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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